View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2753_high_62 (Length: 230)
Name: NF2753_high_62
Description: NF2753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2753_high_62 |
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Alignment Details
Target: chr3 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 30727288 - 30727486
Alignment:
| Q |
19 |
atgactgagtgtgataaaatactatatagtaaactgtttaacttaagtttccaccaagctcatatggtatataatactgttagtctgttactactg--tg |
116 |
Q |
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| T |
30727288 |
atgactgagtgtgataaaatactatatagtaaactgtttatcttaagtttccaccaagctcatatggtatataatactgttagtctgttactactgtctg |
30727387 |
T |
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| Q |
117 |
gtagtgtaacttaacttcaactatttagtatgtacctaaagtgtgtgccataatttaactcatttctattgtaccaaaaacaagtgtatagcatctctg |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||| |
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| T |
30727388 |
gtagtgtaacttaacttcaactatttagtatgtacctaaagtgtgtgccataatttaacacatttccattgtaccaaaaacaagtgtatagcatttctg |
30727486 |
T |
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