View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2753_high_67 (Length: 214)

Name: NF2753_high_67
Description: NF2753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2753_high_67
NF2753_high_67
[»] chr4 (18 HSPs)
chr4 (19-132)||(4632416-4632530)
chr4 (22-85)||(48160987-48161050)
chr4 (22-85)||(48167206-48167269)
chr4 (22-85)||(10733314-10733378)
chr4 (22-85)||(10739407-10739471)
chr4 (22-85)||(10947083-10947147)
chr4 (22-85)||(10953176-10953240)
chr4 (22-85)||(33458335-33458399)
chr4 (22-85)||(33461461-33461524)
chr4 (26-85)||(6257273-6257333)
chr4 (22-85)||(24288014-24288078)
chr4 (142-191)||(29101572-29101621)
chr4 (26-85)||(3769598-3769658)
chr4 (22-85)||(44831680-44831744)
chr4 (41-85)||(49976634-49976678)
chr4 (26-85)||(50168624-50168684)
chr4 (42-81)||(28704559-28704598)
chr4 (22-77)||(19686404-19686460)
[»] chr8 (14 HSPs)
chr8 (22-85)||(10700057-10700120)
chr8 (22-85)||(14799484-14799547)
chr8 (22-85)||(42993072-42993135)
chr8 (22-85)||(36818999-36819062)
chr8 (22-80)||(10705865-10705923)
chr8 (22-85)||(5542228-5542292)
chr8 (22-85)||(14417968-14418032)
chr8 (22-85)||(22219785-22219849)
chr8 (22-85)||(7771259-7771323)
chr8 (22-85)||(9935306-9935370)
chr8 (22-85)||(32890916-32890980)
chr8 (22-85)||(32897040-32897104)
chr8 (22-85)||(39735620-39735684)
chr8 (22-59)||(39727405-39727443)
[»] chr6 (12 HSPs)
chr6 (22-85)||(25354239-25354302)
chr6 (22-85)||(8650871-8650935)
chr6 (22-85)||(21782821-21782885)
chr6 (22-85)||(25343652-25343715)
chr6 (22-85)||(4580389-4580453)
chr6 (26-85)||(8662849-8662909)
chr6 (22-85)||(32035354-32035418)
chr6 (22-85)||(21190934-21190998)
chr6 (22-85)||(31756283-31756347)
chr6 (25-85)||(18778614-18778674)
chr6 (22-67)||(6098008-6098053)
chr6 (27-85)||(21197089-21197148)
[»] chr2 (14 HSPs)
chr2 (22-85)||(13149754-13149817)
chr2 (22-85)||(36750442-36750506)
chr2 (22-85)||(28683013-28683077)
chr2 (22-85)||(31002404-31002468)
chr2 (22-85)||(31008382-31008446)
chr2 (22-85)||(44716873-44716937)
chr2 (22-85)||(13456127-13456191)
chr2 (22-85)||(13462068-13462132)
chr2 (22-85)||(30965355-30965419)
chr2 (22-85)||(35090717-35090781)
chr2 (22-85)||(35084744-35084808)
chr2 (38-85)||(29833252-29833299)
chr2 (46-85)||(35438777-35438816)
chr2 (22-85)||(23343588-23343652)
[»] chr1 (13 HSPs)
chr1 (22-85)||(31058072-31058135)
chr1 (22-85)||(31051572-31051635)
chr1 (22-85)||(25387572-25387636)
chr1 (22-85)||(34740013-34740077)
chr1 (26-85)||(50306221-50306280)
chr1 (22-85)||(1078251-1078315)
chr1 (22-85)||(8092914-8092978)
chr1 (29-85)||(12183652-12183708)
chr1 (22-85)||(25381603-25381667)
chr1 (22-74)||(38152048-38152101)
chr1 (49-85)||(27955216-27955252)
chr1 (28-85)||(24926822-24926880)
chr1 (42-83)||(27395765-27395806)
[»] chr3 (24 HSPs)
chr3 (22-85)||(38449131-38449195)
chr3 (22-85)||(38455618-38455682)
chr3 (26-85)||(10238280-10238340)
chr3 (22-85)||(10760718-10760782)
chr3 (22-85)||(11839793-11839857)
chr3 (22-85)||(11846131-11846195)
chr3 (22-85)||(17055861-17055925)
chr3 (22-85)||(30051170-30051234)
chr3 (26-85)||(8331818-8331878)
chr3 (26-85)||(10244402-10244462)
chr3 (22-85)||(10766939-10767003)
chr3 (22-85)||(17593350-17593414)
chr3 (22-85)||(49151639-49151703)
chr3 (22-85)||(49157706-49157770)
chr3 (22-85)||(55003480-55003544)
chr3 (22-77)||(13445088-13445144)
chr3 (22-85)||(34300524-34300588)
chr3 (22-85)||(42191288-42191352)
chr3 (22-85)||(42197230-42197294)
chr3 (22-85)||(48128115-48128179)
chr3 (25-85)||(53069122-53069183)
chr3 (42-85)||(28964916-28964959)
chr3 (26-85)||(12108736-12108796)
chr3 (22-77)||(46656711-46656767)
[»] chr5 (18 HSPs)
chr5 (22-85)||(7389616-7389679)
chr5 (22-85)||(30772310-30772374)
chr5 (26-85)||(12686247-12686307)
chr5 (26-85)||(12692349-12692409)
chr5 (22-85)||(28525454-28525518)
chr5 (22-85)||(28531550-28531614)
chr5 (29-85)||(24054369-24054426)
chr5 (26-85)||(32094228-32094288)
chr5 (26-85)||(32097029-32097089)
chr5 (22-85)||(41297304-41297368)
chr5 (30-85)||(14610184-14610240)
chr5 (26-85)||(28542269-28542329)
chr5 (22-83)||(16215244-16215306)
chr5 (22-67)||(19059850-19059896)
chr5 (40-85)||(37896366-37896411)
chr5 (22-81)||(19066179-19066239)
chr5 (22-85)||(20500165-20500229)
chr5 (22-85)||(30384446-30384509)
[»] scaffold0363 (1 HSPs)
scaffold0363 (22-85)||(687-751)
[»] chr7 (15 HSPs)
chr7 (22-85)||(3811237-3811301)
chr7 (22-85)||(3817379-3817443)
chr7 (22-85)||(20238978-20239042)
chr7 (22-85)||(43540012-43540076)
chr7 (26-85)||(339402-339462)
chr7 (26-85)||(351817-351877)
chr7 (26-85)||(28421027-28421087)
chr7 (22-85)||(42767363-42767427)
chr7 (26-85)||(22741993-22742052)
chr7 (25-85)||(35148072-35148133)
chr7 (22-85)||(26383653-26383717)
chr7 (22-85)||(5979242-5979306)
chr7 (22-85)||(12804027-12804091)
chr7 (22-85)||(30219314-30219378)
chr7 (26-85)||(5849556-5849616)
[»] scaffold0440 (1 HSPs)
scaffold0440 (22-85)||(1262-1326)
[»] scaffold0236 (1 HSPs)
scaffold0236 (26-85)||(5566-5626)
[»] scaffold0208 (2 HSPs)
scaffold0208 (26-85)||(6554-6614)
scaffold0208 (26-85)||(12427-12487)
[»] scaffold0012 (1 HSPs)
scaffold0012 (26-85)||(172958-173018)
[»] scaffold0185 (1 HSPs)
scaffold0185 (42-85)||(5971-6014)
[»] scaffold0085 (1 HSPs)
scaffold0085 (26-85)||(38460-38519)


Alignment Details
Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 4632416 - 4632530
Alignment:
Q  19 ctgataccctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttcagtggcggagtca-gnnnnnnngctcgggtgggc 117  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| || |       |||| |||||||    
T  4632416 ctgataccctaattcttaatatcttgataaatcaaacatgtcgtagatccgatcataatcatgttcagtggcggagccaggaaaaaaagctctggtgggc 4632515  T
Q  118 cactaaaattaaccg 132  Q
    |||||||||||||||    
T  4632516 cactaaaattaaccg 4632530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 48160987 - 48161050
Alignment:
Q  22 ataccctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  48160987 ataccctaattcttaatatcttgataaatcaaacatgtcgtagatccgatcataattatgttca 48161050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 48167206 - 48167269
Alignment:
Q  22 ataccctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||    
T  48167206 ataccctaattcttaatatcttgataaatcaaacatgtcgtagatccgatcataattatgttca 48167269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 10733378 - 10733314
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  10733378 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 10733314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 10739471 - 10739407
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  10739471 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 10739407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 10947147 - 10947083
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  10947147 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 10947083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 10953240 - 10953176
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  10953240 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 10953176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 33458399 - 33458335
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  33458399 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 33458335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 33461524 - 33461461
Alignment:
Q  22 ataccctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||| || ||||||||||||||    
T  33461524 ataccctaattcttaatatcttgataaatcaaacatgtcgtaaatccgaccataatcatgttca 33461461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 6257333 - 6257273
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  6257333 cctaattcttaacatccttgataaatcaaacatgttgtagatccgatcataatcatgttca 6257273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 24288014 - 24288078
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||  |||||||||||||||||    
T  24288014 ataccctaattcttaataaccttgataaatcaaacatgtcgtagatacgatcataatcatgttca 24288078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 29101621 - 29101572
Alignment:
Q  142 aaaatacactgctgatattaaagcacgtcattaaaactcacgtgtaccta 191  Q
    ||||||||||||||||| | ||||||  ||||||||||||||||||||||    
T  29101621 aaaatacactgctgatactgaagcactgcattaaaactcacgtgtaccta 29101572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 3769598 - 3769658
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||| |||||||| ||||| ||| |||||||| ||||||| |||||||||||||||||    
T  3769598 cctaattattaatatccttgattaatgaaacatgtcgtagatccgatcataatcatgttca 3769658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 44831744 - 44831680
Alignment:
Q  22 ataccctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||| |||||||||| |||||||||| |||||||| ||||||  ||||||| |||||||||    
T  44831744 ataccctagttcttaatatccttgataaattaaacatgtcgtagattcgatcatattcatgttca 44831680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 49976634 - 49976678
Alignment:
Q  41 cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||||||||||||||| ||||||| |||||||||||| ||||    
T  49976634 cttgataaatcaaacatgtcgtagatccgatcataatcatattca 49976678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 50168624 - 50168684
Alignment:
Q  26 cctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||| ||||||| ||||||||||||||||||| ||| ||  |||||||||||||||||    
T  50168624 cctaattgttaatattcttgataaatcaaacatgtcgtatattcgatcataatcatgttca 50168684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 28704559 - 28704598
Alignment:
Q  42 ttgataaatcaaacatgttgtagatctgatcataatcatg 81  Q
    |||||| ||||||||||||||||||||||||||| |||||    
T  28704559 ttgatacatcaaacatgttgtagatctgatcatattcatg 28704598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 19686460 - 19686404
Alignment:
Q  22 ataccctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataat 77  Q
    |||||| |||||||||||| |||||| |||||| ||||||||||||| ||| |||||    
T  19686460 atacccgaattcttaatatgcttgattaatcaagcatgttgtagatccgatgataat 19686404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 2e-23; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 10700057 - 10700120
Alignment:
Q  22 ataccctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  10700057 ataccctaattcttaatatcttgataaatcaaacatgtcgtagatccgatcataatcatgttca 10700120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 14799547 - 14799484
Alignment:
Q  22 ataccctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  14799547 ataccctaattcttaatatcttgataaatcaaacatgtcgtagatccgatcataatcatgttca 14799484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 42993135 - 42993072
Alignment:
Q  22 ataccctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  42993135 ataccctaattcttaatatcttgataaatcaaacatgtcgtagatccgatcataatcatgttca 42993072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 36818999 - 36819062
Alignment:
Q  22 ataccctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  36818999 ataccctaattcttaatatcttgataaatcaaacatgtcgtagatccgatcataatcatattca 36819062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 10705865 - 10705923
Alignment:
Q  22 ataccctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcat 80  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  10705865 ataccctaattcttaatatcttgataaatcaaacatgtcgtagatccgatcataatcat 10705923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 5542292 - 5542228
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  5542292 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 5542228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 14417968 - 14418032
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  14417968 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 14418032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 22219849 - 22219785
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  22219849 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 22219785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 7771259 - 7771323
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||    
T  7771259 ataccctaattcttaatatccttggtaaatcaaacatgtcgtagatccgatcataatcatgttca 7771323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 9935306 - 9935370
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||| ||||    
T  9935306 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatattca 9935370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 32890916 - 32890980
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||    
T  32890916 ataccctaattcttaatatccttggtaaatcaaacatgtcgtagatccgatcataatcatgttca 32890980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 32897040 - 32897104
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||    
T  32897040 ataccctaattcttaatatccttggtaaatcaaacatgtcgtagatccgatcataatcatgttca 32897104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 39735684 - 39735620
Alignment:
Q  22 ataccctaattcttaatatctt-gataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||||   ||||||||||||||||    
T  39735684 ataccctagttcttaatatctttgataaatcaaacatgtcgtagatacaatcataatcatgttca 39735620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 39727443 - 39727405
Alignment:
Q  22 ataccctaattcttaatat-cttgataaatcaaacatgt 59  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  39727443 ataccctaattcttaatatccttgataaatcaaacatgt 39727405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 25354239 - 25354302
Alignment:
Q  22 ataccctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  25354239 ataccctaattcttaatatcttgataaatcaaacatgtcgtagatccgatcataatcatgttca 25354302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 8650935 - 8650871
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  8650935 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 8650871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 21782885 - 21782821
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  21782885 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 21782821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 25343652 - 25343715
Alignment:
Q  22 ataccctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||    
T  25343652 atactctaattcttaatatcttgataaatcaaaaatgtcgtagatccgatcataatcatgttca 25343715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 4580453 - 4580389
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||    
T  4580453 ataccctaattcttaatatccttggtaaatcaaacatgtcgtagatccgatcataatcatgttca 4580389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 8662909 - 8662849
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  8662909 cctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 8662849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 32035418 - 32035354
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||| |||||||||||||||||    
T  32035418 ataccctaattcttaataaccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 32035354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 21190998 - 21190934
Alignment:
Q  22 ataccctaattcttaatatctt-gataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||||| ||||||||||| || | ||||||| |||||||||||||||||    
T  21190998 ataccctaattcttaatatctttgataaatcaaatatatcgtagatccgatcataatcatgttca 21190934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 31756347 - 31756283
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| ||||||| |||||||||| ||||||| ||| |||||||||||||    
T  31756347 ataccctaattcttaatatccttgataattcaaacatgtcgtagatccgattataatcatgttca 31756283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 18778614 - 18778674
Alignment:
Q  25 ccctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| ||||||||||||| | || ||||||| ||||||||| |||||||    
T  18778614 ccctaattcttaatatattgataaatcaaatacgtcgtagatccgatcataattatgttca 18778674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 6098008 - 6098053
Alignment:
Q  22 ataccctaattcttaatatcttgataaatcaaacatgttgtagatc 67  Q
    |||||||||||||||| |||||||||||||||||| || |||||||    
T  6098008 ataccctaattcttaacatcttgataaatcaaacacgtcgtagatc 6098053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 21197148 - 21197089
Alignment:
Q  27 ctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||||| ||||| |||||||||||||||||||||||||| | ||||| | |||||||    
T  21197148 ctaattcttgatatccttgataaatcaaacatgttgtagatccgttcatacttatgttca 21197089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 2e-23; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 13149817 - 13149754
Alignment:
Q  22 ataccctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  13149817 ataccctaattcttaatatcttgataaatcaaacatgtcgtagatccgatcataatcatgttca 13149754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 36750442 - 36750506
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  36750442 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 36750506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 28683077 - 28683013
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||| |||||||||||||||||    
T  28683077 ataccctaattcttaataaccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 28683013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 31002404 - 31002468
Alignment:
Q  22 ataccctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||| |||| ||||||||||||||||||| ||||||| |||||||||||||||||    
T  31002404 ataccctaattcttgatattcttgataaatcaaacatgtcgtagatccgatcataatcatgttca 31002468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 31008382 - 31008446
Alignment:
Q  22 ataccctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||| |||| ||||||||||||||||||| ||||||| |||||||||||||||||    
T  31008382 ataccctaattcttgatattcttgataaatcaaacatgtcgtagatccgatcataatcatgttca 31008446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 44716937 - 44716873
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||    
T  44716937 ataccctaattcttaatatccttggtaaatcaaacatgtcgtagatccgatcataatcatgttca 44716873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 13456127 - 13456191
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||| ||||||||||| |||||    
T  13456127 ataccctaattcttaatacccttgataaatcaaacatgtcgtagatccgatcataatcaggttca 13456191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 13462068 - 13462132
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||| ||||||||||| |||||    
T  13462068 ataccctaattcttaatacccttgataaatcaaacatgtcgtagatccgatcataatcaggttca 13462132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 30965355 - 30965419
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| ||  |||||||||||||||||| ||||||| |||||||||||||||||    
T  30965355 ataccctaattcttaaaataattgataaatcaaacatgtcgtagatccgatcataatcatgttca 30965419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 35090781 - 35090717
Alignment:
Q  22 ataccctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||| |||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||    
T  35090781 atacactaattgttaatattcttgataaatcaaacatgtcgtagatccgatcataatcatgttca 35090717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 35084808 - 35084744
Alignment:
Q  22 ataccctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||| |||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||| ||||    
T  35084808 atacactaattgttaatattcttgataaatcaaacatgtcgtagatccgatcataatcattttca 35084744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 29833252 - 29833299
Alignment:
Q  38 tatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||||||    
T  29833252 tatcttgataaatcaaacatgttgtcgatccgatcataattatgttca 29833299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 35438816 - 35438777
Alignment:
Q  46 taaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  35438816 taaatcaaacatgtcgtagatccgatcataatcatgttca 35438777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 23343588 - 23343652
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||| || |||||||||| |||||||||||||||||| ||||||  | ||||| |||||||||    
T  23343588 ataccccaactcttaatatccttgataaatcaaacatgtcgtagattcgttcatattcatgttca 23343652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 31058072 - 31058135
Alignment:
Q  22 ataccctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  31058072 ataccctaattcttaatatcttgataaatcaaacatgtcgtagatccgatcataatcatgttca 31058135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 31051572 - 31051635
Alignment:
Q  22 ataccctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||    
T  31051572 ataccctaattcttaatatcttgataaatcaaacatgtcgtagatccaatcataatcatgttca 31051635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 25387636 - 25387572
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  25387636 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 25387572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 34740013 - 34740077
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  34740013 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 34740077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 50306221 - 50306280
Alignment:
Q  26 cctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  50306221 cctaattcttaatatcttgataaatcaaacatgtcgtagatccgattataatcatgttca 50306280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 1078251 - 1078315
Alignment:
Q  22 ataccctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||||| |||||||||||||||||    
T  1078251 ataccctaattcttaatattcttggtaaatcaaacatgtcgtagatccgatcataatcatgttca 1078315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 8092978 - 8092914
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||||    
T  8092978 atacccaaattcttaatatccttgataaatcaaacatgtcatagatccgatcataatcatgttca 8092914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 12183708 - 12183652
Alignment:
Q  29 aattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||||||||||||||||||||||||||| |||||||  |||||||| |||||||    
T  12183708 aattcttaatatcttgataaatcaaacatgtcgtagatccaatcataattatgttca 12183652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 25381667 - 25381603
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| ||| |||||||||||| | ||||||| |||||||||||||||||    
T  25381667 ataccctaattcttaatatccttggtaaatcaaacatttcgtagatccgatcataatcatgttca 25381603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 38152101 - 38152048
Alignment:
Q  22 ataccctaattcttaatatctt-gataaatcaaacatgttgtagatctgatcat 74  Q
    ||||||||||||||||||| || |||||||||||||||| ||||||||||||||    
T  38152101 ataccctaattcttaatatgtttgataaatcaaacatgtcgtagatctgatcat 38152048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 27955216 - 27955252
Alignment:
Q  49 atcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||||||||||||||| |||||||||||||||||    
T  27955216 atcaaacatgttgtagatccgatcataatcatgttca 27955252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 24926880 - 24926822
Alignment:
Q  28 taattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||||||||| ||||||||||||||||||| ||||||| | ||||| | |||||||    
T  24926880 taattcttaatattcttgataaatcaaacatgtcgtagatccgttcatattaatgttca 24926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 27395806 - 27395765
Alignment:
Q  42 ttgataaatcaaacatgttgtagatctgatcataatcatgtt 83  Q
    |||||| ||||||||||||||| ||||||||||| |||||||    
T  27395806 ttgatagatcaaacatgttgtaaatctgatcatattcatgtt 27395765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 1e-21; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 38449195 - 38449131
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  38449195 ataccctaattcttaatatccttgataaatcaaacatgttgtagatccgatcataatcatgttca 38449131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 38455682 - 38455618
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  38455682 ataccctaattcttaatatccttgataaatcaaacatgttgtagatccgatcataatcatgttca 38455618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 10238340 - 10238280
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  10238340 cctaattcttaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttca 10238280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 10760782 - 10760718
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  10760782 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 10760718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 11839857 - 11839793
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  11839857 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 11839793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 11846195 - 11846131
Alignment:
Q  22 ataccctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||    
T  11846195 ataccctaattcttaatatacttgataaatcaaacatgtcgtagatccgatcataatcatgttca 11846131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 17055925 - 17055861
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  17055925 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 17055861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 30051234 - 30051170
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  30051234 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatctgattataatcatgttca 30051170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 8331818 - 8331878
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  8331818 cctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 8331878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 10244462 - 10244402
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  10244462 cctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 10244402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 10767003 - 10766939
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  10767003 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccggtcataatcatgttca 10766939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 17593414 - 17593350
Alignment:
Q  22 ataccctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||||||||    
T  17593414 ataccctaattcttaatattcttgataaattaaacatgtcgtagatccgatcataatcatgttca 17593350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 49151639 - 49151703
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||| |||||||||||||||||    
T  49151639 ataccctaattcttaatatccttaataaatcaaacatgtcgtagatccgatcataatcatgttca 49151703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 49157706 - 49157770
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||| |||||||||||||||||    
T  49157706 ataccctaattcttaatatccttaataaatcaaacatgtcgtagatccgatcataatcatgttca 49157770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 55003544 - 55003480
Alignment:
Q  22 ataccctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||||||||    
T  55003544 ataccctaattcttaatatacttgataaattaaacatgtcgtagatccgatcataatcatgttca 55003480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 13445088 - 13445144
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataat 77  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||    
T  13445088 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataat 13445144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 34300524 - 34300588
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| || |||||||||| |||| ||||||| |||||||||||||||||    
T  34300524 ataccctaattcttaatatcctttataaatcaaatatgtcgtagatccgatcataatcatgttca 34300588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 42191352 - 42191288
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||| ||||||||||| |||||    
T  42191352 ataccctaattcttaatacccttgataaatcaaacatgtcgtagatccgatcataatcaggttca 42191288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 42197294 - 42197230
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||| ||||||||||| |||||    
T  42197294 ataccctaattcttaatacccttgataaatcaaacatgtcgtagatccgatcataatcaggttca 42197230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 48128179 - 48128115
Alignment:
Q  22 ataccctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||| | |||||||||||||||||    
T  48128179 ataccctaattcttaatattcttaataaatcaaacatgtcgtagaaccgatcataatcatgttca 48128115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 53069183 - 53069122
Alignment:
Q  25 ccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||| |||||||||||| ||||||||||||||||||  |||||| |||||||||||||||||    
T  53069183 ccctgattcttaatatccttgataaatcaaacatgtcatagatccgatcataatcatgttca 53069122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 28964916 - 28964959
Alignment:
Q  42 ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  28964916 ttgataaatcaaacatgtcgtagatccgatcataatcatgttca 28964959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 12108796 - 12108736
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||| |||||||| ||||||||||||||||||  ||||||  ||||||||||| ||||    
T  12108796 cctaattgttaatatccttgataaatcaaacatgtcttagatcaaatcataatcatattca 12108736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 46656711 - 46656767
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataat 77  Q
    ||||||| ||||| |||||| |||||||||||||||| | ||||||| |||||||||    
T  46656711 ataccctcattctcaatatcattgataaatcaaacatatcgtagatccgatcataat 46656767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 5e-21; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 7389679 - 7389616
Alignment:
Q  22 ataccctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||    
T  7389679 ataccctaattcttaatatcttgataaatcaaacatgtcgtggatccgatcataatcatgttca 7389616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 30772310 - 30772374
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  30772310 ataccctaattcttaatatccttgataaatcaaacatgttgtcgatccgatcataatcatgttca 30772374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 12686307 - 12686247
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  12686307 cctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 12686247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 12692409 - 12692349
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  12692409 cctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 12692349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 28525518 - 28525454
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||| |||||||||||||||||    
T  28525518 ataccctaattcttaatatccttaataaatcaaacatgtcgtagatccgatcataatcatgttca 28525454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 28531614 - 28531550
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||| |||||||||||||||||    
T  28531614 ataccctaattcttaatatccttaataaatcaaacatgtcgtagatccgatcataatcatgttca 28531550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 24054369 - 24054426
Alignment:
Q  29 aattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  24054369 aattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 24054426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 32094288 - 32094228
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| |||||||||||||||||| |||||||  ||||||||||||||||    
T  32094288 cctaattcttaatatccttgataaatcaaacatgtcgtagatcctatcataatcatgttca 32094228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 32097089 - 32097029
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| |||||||||||||||||| |||||||  ||||||||||||||||    
T  32097089 cctaattcttaatatccttgataaatcaaacatgtcgtagatcctatcataatcatgttca 32097029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 41297304 - 41297368
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||| ||||||||| |||||||    
T  41297304 ataccctaattctttatatccttgataaatcaaacatgtcgtagatccgatcataattatgttca 41297368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 14610184 - 14610240
Alignment:
Q  30 attcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||| |||||||||||||||||| ||| ||| |||||||||||||||||    
T  14610184 attcttaatatccttgataaatcaaacatgtcgtaaatccgatcataatcatgttca 14610240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 28542269 - 28542329
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| |||||||||||||||||| |||| |  |||||||||||||||||    
T  28542269 cctaattcttaatatccttgataaatcaaacatgtcgtagtttcgatcataatcatgttca 28542329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 16215306 - 16215244
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgtt 83  Q
    ||||||||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||    
T  16215306 ataccctaatttttaatatccttgataaatcaaacatttcgtagatccaatcataatcatgtt 16215244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 19059896 - 19059850
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatc 67  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||    
T  19059896 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatc 19059850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 37896411 - 37896366
Alignment:
Q  40 tcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||||    
T  37896411 tcttgataaatcaatcatgtcgtagatccgatcataatcatgttca 37896366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 19066239 - 19066179
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatg 81  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||||| | ||||| |||||    
T  19066239 ataccataattcttaatatccttgataaatcaaacatgtcgtagatccgttcatattcatg 19066179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 20500165 - 20500229
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||| |||||||||| |||| ||||||||||||  |||| ||||||| |||||||||||||||||    
T  20500165 atactctaattcttagtatccttgataaatcaagtatgtcgtagatccgatcataatcatgttca 20500229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 30384509 - 30384446
Alignment:
Q  22 ataccctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||| ||||||||||| |||||||||||| ||||| | |||||| |||||||||| ||||||    
T  30384509 atacccttattcttaatatccttgataaatcagacatg-tctagatccgatcataatcgtgttca 30384446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 751 - 687
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  751 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 3e-19; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 3811301 - 3811237
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  3811301 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 3811237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 3817443 - 3817379
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  3817443 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 3817379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 20238978 - 20239042
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  20238978 ataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 20239042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 43540012 - 43540076
Alignment:
Q  22 ataccctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  43540012 ataccctaatttttaatattcttgataaatcaaacatgttgtagatccgatcataatcatgttca 43540076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 339402 - 339462
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  339402 cctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 339462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 351817 - 351877
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  351817 cctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 351877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 28421087 - 28421027
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  28421087 cctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 28421027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 42767427 - 42767363
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||    
T  42767427 ataccctaattcttaatatccttgataaatcaaatatgtcgtagatccgatcataatcatgttca 42767363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 22742052 - 22741993
Alignment:
Q  26 cctaattcttaatatcttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||| || |||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  22742052 cctaatcctcaatatcttgataaatcaaacatgtcgtagatccgatcataatcatgttca 22741993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 35148133 - 35148072
Alignment:
Q  25 ccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||| |||||||||||||||||    
T  35148133 ccctaattcttaatatccttgataaatcaaacgtgtcgtagatccgatcataatcatgttca 35148072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 26383653 - 26383717
Alignment:
Q  22 ataccctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  26383653 ataccctaattcttagtatgcttgataaatcaaacatgtcgtagatccgatcatgatcatgttca 26383717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 5979306 - 5979242
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| ||| || ||||||||||||||| |||||||  ||||||||||||||||    
T  5979306 ataccctaattcttaacatccttaataaatcaaacatgtcgtagatccaatcataatcatgttca 5979242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 12804027 - 12804091
Alignment:
Q  22 ataccctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| | ||||  |||||||||    
T  12804027 ataccctaattcttaatattcttgataaatcaaacatgtcgtagatccgttcatgttcatgttca 12804091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 30219378 - 30219314
Alignment:
Q  22 ataccctaattcttaatatcttga-taaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||| |||||||||||||||| | |||||||||||||| ||||||| | ||||| |||||||||    
T  30219378 ataccataattcttaatatctttaataaatcaaacatgtcgtagatccgttcatattcatgttca 30219314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 5849556 - 5849616
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||| ||||| |||||||||||||||||| ||||||| | ||||| | |||||||    
T  5849556 cctaattcttgatatccttgataaatcaaacatgtcgtagatccgttcatatttatgttca 5849616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 1326 - 1262
Alignment:
Q  22 ataccctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||||| |||||||||||||||| | ||||||| |||||||||||||||||    
T  1326 ataccctaattcttaatatccttgataaatcaaacatatcgtagatccgatcataatcatgttca 1262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 5566 - 5626
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  5566 cctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttca 5626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 6554 - 6614
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| |||||||||||||||||||||||||    |||||||||||||||    
T  6554 cctaattcttaatatccttgataaatcaaacatgttgtagattcagtcataatcatgttca 6614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 12427 - 12487
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| |||||||||||||||||| ||||||  ||||||||| |||||||    
T  12427 cctaattcttaatatccttgataaatcaaacatgtcgtagattcgatcataattatgttca 12487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 173018 - 172958
Alignment:
Q  26 cctaattcttaatatc-ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||| ||||||||| |||||||| ||||||| |||||||||||| ||||    
T  173018 cctaattcttaatatccttgataaattaaacatgtcgtagatccgatcataatcattttca 172958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 5971 - 6014
Alignment:
Q  42 ttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||    
T  5971 ttgataaatcaaacatgtcgtagatccgatcatattcatgttca 6014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 38460 - 38519
Alignment:
Q  26 cctaattcttaatat-cttgataaatcaaacatgttgtagatctgatcataatcatgttca 85  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||| ||||||||  |||||||    
T  38460 cctaattattaatattcttgataaa-caaacatgttgtagatccgatcataactatgttca 38519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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