View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2754_high_11 (Length: 249)
Name: NF2754_high_11
Description: NF2754
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2754_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 2018002 - 2018225
Alignment:
| Q |
20 |
acattgcataatatatgtaggagacggagttcaaacccagacatcccacttgtta-tttaagtctccctgacccaataaaaaatataaaatactctccta |
118 |
Q |
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| T |
2018002 |
acattgtataatatatgtagaagacggagttctaacccagacatcccacttgttactttaagtctccttgacccaataaaaaatataaaatactctccta |
2018101 |
T |
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| Q |
119 |
cgatttatgtttgaactaagaaattgaactaaaaaatctcacttcttatcccataattcataccaattaagttctataaccctccacaaacaccatgggc |
218 |
Q |
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| T |
2018102 |
cgatttatgtttgaactaagaaattgaactaaaaaatctcacttcttatcccataattcataccaattaagttctataaccttccacaaacaccatgggc |
2018201 |
T |
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| Q |
219 |
tattaagaaagaaaagatgatgtc |
242 |
Q |
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|||||||||||||||||||||||| |
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| T |
2018202 |
tattaagaaagaaaagatgatgtc |
2018225 |
T |
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