View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2754_low_2 (Length: 622)
Name: NF2754_low_2
Description: NF2754
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2754_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 570; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 570; E-Value: 0
Query Start/End: Original strand, 16 - 610
Target Start/End: Complemental strand, 21830082 - 21829488
Alignment:
| Q |
16 |
gtaattacggaagaaacaatggatatggtaagaagctaggttcagattcttatatatcaagaagtttaaggttaagtaaaagaagaggtgcttcattgtt |
115 |
Q |
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| T |
21830082 |
gtaattacggaagaaacaatggatatggtaagaagctaggttcagattcttatatatcaagaagtttaaggttaagtaaaagaagaggtgcttcattgtt |
21829983 |
T |
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| Q |
116 |
gaagaatattaaaggtgtagcaagtggaattgttggtgaacgtgaaagagaagttgttgtaccacaagttgttgatcaaaataaaactcaagggaagaat |
215 |
Q |
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| T |
21829982 |
gaagaatattaaaggtgtagcaagtggaattgttggtgaacgtgaaagagaagttgttgtaccacaagttgttgatcaaaataaaactcaagggaagaat |
21829883 |
T |
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| Q |
216 |
aaatgggttaaggttaggcaaagtgggaaatcacaaaaagagctttcagctttgcatttatgtcaagaatttcaagcacatgaagggtgtatttggacta |
315 |
Q |
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| T |
21829882 |
aaatgggttaaggttaggcaaagtgggaaatcacaaaaagagctttcagctttgcatttatgtcaagaatttcaagcacatgaagggtgtatttggacta |
21829783 |
T |
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| Q |
316 |
tgaagtttagtttggatggaaggtttttggctactgctggtgaggataaagtgatacatatttgggaagttcaagaatgtgaggttatgagtatgagagg |
415 |
Q |
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| T |
21829782 |
tgaagtttagtttggatggaaggtttttggctactgctggtgaggataaagtgatacatatttgggaagttcaagaatgtgaggttatgagtatgagagg |
21829683 |
T |
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| Q |
416 |
tgaggaagggaatcttactcctattcatccttctttgctttcttctatggaaagagnnnnnnntgttgatactcatagtttggttaagaagaaagggaaa |
515 |
Q |
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| T |
21829682 |
tgaggaagggaatcttactcctattcatccttctttgctttcttcaatggaaagagaaaaaaatgttgatactcatagtttggttaagaagaaagggaaa |
21829583 |
T |
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| Q |
516 |
tttggaagtaaaagaggaggagggtcagcagctattcctgaatatgttcatgtgcctgaaaatgtttttactttctctgagaaaccttattgttc |
610 |
Q |
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| T |
21829582 |
tttggaagtaaaagaggaggagggtcagcagctattcctgaatatgttcatgtgcctgaaaatgtttttactttctctgagaaaccttattgttc |
21829488 |
T |
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