View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2755_high_20 (Length: 340)
Name: NF2755_high_20
Description: NF2755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2755_high_20 |
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Alignment Details
Target: chr1 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 19 - 330
Target Start/End: Complemental strand, 32432340 - 32432029
Alignment:
| Q |
19 |
tccttcgcaaaaggaggaaatggaacaaggattcttctgtcaagcatgcttctttactgtttgtgcggttggttgctggagttatgttggttgtgtcggt |
118 |
Q |
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| T |
32432340 |
tccttcgcaaaaggaggaaatggaacaaggattcttctgtcaagcatgcttctttactgtttgtgcggttggttgctggagttatgttggttgtgtcggt |
32432241 |
T |
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| Q |
119 |
ttctttagcttccaacaacccctcttgtgagttttatcagtatgtcaatgcattcgtcatgatgaatctgtgttagaattttgattagattatgtggcac |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32432240 |
ttctttagcttccaacaacccctcttgtgagttttatcagtatgtcaatgcattcgtcatgatgaatctgtgttagaattttgattagattatgtggcac |
32432141 |
T |
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| Q |
219 |
tcacacttcaaattgaagggtgtctggtgtccaacatgtatcagacatcgattagttcaattttctaaaattattatccatgtctagtgtcagtgttgtg |
318 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
32432140 |
tcacacttcaaattgaaggttgtctggtgtccaacatgtatcagacatcgattagttcaattttctgaaattattatccatgtctagtgtcagtgttgtg |
32432041 |
T |
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| Q |
319 |
tcccgtgttcat |
330 |
Q |
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|||||||||||| |
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| T |
32432040 |
tcccgtgttcat |
32432029 |
T |
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