View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2755_high_34 (Length: 248)
Name: NF2755_high_34
Description: NF2755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2755_high_34 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 32034416 - 32034650
Alignment:
| Q |
1 |
aatgatcgattcaatctttttcactaataataaagaactagtgtacacaacattagtaagattcgaatagtttgtcacgagatctgctaataattaataa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32034416 |
aatgatcgattcaatctttttcactaataataaagaactagtgtacacaacattagtaagattcgaatagtttgtcacgagatctgctaataattaataa |
32034515 |
T |
|
| Q |
101 |
atgtactcaaatatgtattattaagaaaaatatattcttaatatctgttcaagagatctcacggtgttgtgatacactgatactagatctcaggccttgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |
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| T |
32034516 |
atgtactcaaatatgtattattaagaaaaatatattcttaatatctgttcaagagatctcacggtgttttgat------atactagatctcaggccttgt |
32034609 |
T |
|
| Q |
201 |
tatcatcactaaaaattgtttcttccaaaactaagtattat |
241 |
Q |
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|||||||||||||||||||| |||| ||||||||||||||| |
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| T |
32034610 |
tatcatcactaaaaattgttacttctaaaactaagtattat |
32034650 |
T |
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