View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2755_low_20 (Length: 368)

Name: NF2755_low_20
Description: NF2755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2755_low_20
NF2755_low_20
[»] chr2 (19 HSPs)
chr2 (8-368)||(17765106-17765478)
chr2 (6-323)||(28252343-28252671)
chr2 (6-352)||(15917275-15917634)
chr2 (118-323)||(11000139-11000344)
chr2 (253-362)||(41206897-41207006)
chr2 (8-113)||(41206630-41206738)
chr2 (9-88)||(44472983-44473065)
chr2 (238-323)||(12645402-12645487)
chr2 (28-95)||(38604799-38604866)
chr2 (24-71)||(42563108-42563155)
chr2 (6-95)||(15391765-15391857)
chr2 (10-86)||(4551795-4551874)
chr2 (118-323)||(14439499-14439703)
chr2 (118-158)||(23290088-23290128)
chr2 (6-88)||(44022984-44023069)
chr2 (118-215)||(33516081-33516178)
chr2 (28-80)||(12645183-12645235)
chr2 (118-158)||(12645282-12645322)
chr2 (28-80)||(40176317-40176369)
[»] chr6 (21 HSPs)
chr6 (6-368)||(15958957-15959332)
chr6 (6-242)||(32536517-32536765)
chr6 (27-323)||(14373180-14373485)
chr6 (28-361)||(20883184-20883523)
chr6 (229-323)||(17606523-17606617)
chr6 (118-323)||(11462159-11462363)
chr6 (29-114)||(24767831-24767916)
chr6 (9-124)||(5734638-5734756)
chr6 (10-124)||(18651631-18651748)
chr6 (6-95)||(13937322-13937414)
chr6 (229-323)||(21630298-21630392)
chr6 (10-86)||(12733751-12733830)
chr6 (121-323)||(17579270-17579472)
chr6 (30-95)||(12429058-12429123)
chr6 (229-323)||(17573844-17573938)
chr6 (9-86)||(18789314-18789394)
chr6 (253-363)||(24767573-24767683)
chr6 (31-79)||(17330621-17330669)
chr6 (280-323)||(10577438-10577481)
chr6 (10-91)||(21167851-21167935)
chr6 (35-79)||(32797615-32797659)
[»] chr3 (26 HSPs)
chr3 (6-368)||(26771133-26771504)
chr3 (10-363)||(40930677-40931042)
chr3 (6-95)||(963589-963681)
chr3 (229-323)||(33496404-33496498)
chr3 (121-323)||(36801264-36801466)
chr3 (14-92)||(50651777-50651858)
chr3 (204-322)||(29523935-29524053)
chr3 (234-323)||(11203681-11203770)
chr3 (11-86)||(7312404-7312482)
chr3 (9-124)||(34333212-34333330)
chr3 (9-79)||(15312207-15312280)
chr3 (122-189)||(19890428-19890495)
chr3 (27-86)||(19920664-19920723)
chr3 (6-95)||(3140474-3140566)
chr3 (229-323)||(35214560-35214654)
chr3 (9-83)||(2363902-2363979)
chr3 (252-323)||(12342414-12342485)
chr3 (229-323)||(7031206-7031300)
chr3 (6-79)||(17098318-17098394)
chr3 (253-363)||(34332964-34333074)
chr3 (118-220)||(48570331-48570433)
chr3 (31-88)||(11203469-11203526)
chr3 (9-64)||(10313003-10313061)
chr3 (283-323)||(11310384-11310424)
chr3 (9-64)||(15827336-15827394)
chr3 (28-88)||(19890325-19890385)
[»] chr1 (22 HSPs)
chr1 (27-323)||(47623264-47623559)
chr1 (6-127)||(13351936-13352060)
chr1 (229-323)||(43388224-43388318)
chr1 (73-122)||(19161189-19161238)
chr1 (9-124)||(26059516-26059634)
chr1 (9-79)||(4646500-4646573)
chr1 (10-124)||(6259443-6259560)
chr1 (6-79)||(6478141-6478217)
chr1 (9-86)||(11909540-11909620)
chr1 (31-95)||(28351376-28351440)
chr1 (27-86)||(12813639-12813698)
chr1 (9-86)||(51052105-51052185)
chr1 (9-84)||(4842024-4842102)
chr1 (6-65)||(24547522-24547584)
chr1 (28-88)||(37192360-37192420)
chr1 (144-323)||(37191399-37191578)
chr1 (229-323)||(16917998-16918092)
chr1 (118-183)||(51994057-51994122)
chr1 (28-92)||(2490859-2490923)
chr1 (9-76)||(6050227-6050297)
chr1 (31-79)||(23635164-23635212)
chr1 (118-154)||(26720445-26720481)
[»] chr8 (24 HSPs)
chr8 (6-319)||(34137156-34137481)
chr8 (118-352)||(43270196-43270430)
chr8 (121-323)||(2170089-2170291)
chr8 (27-368)||(5181315-5181666)
chr8 (229-323)||(37433989-37434083)
chr8 (121-323)||(17699231-17699433)
chr8 (9-124)||(13396013-13396131)
chr8 (9-124)||(41665766-41665884)
chr8 (118-365)||(2529632-2529879)
chr8 (10-92)||(9922227-9922312)
chr8 (118-361)||(13199869-13200112)
chr8 (10-124)||(171729-171846)
chr8 (235-361)||(9922464-9922590)
chr8 (7-79)||(12257893-12257968)
chr8 (7-79)||(12265285-12265360)
chr8 (28-88)||(25090034-25090094)
chr8 (9-124)||(32266189-32266307)
chr8 (9-124)||(32567662-32567779)
chr8 (9-83)||(7924011-7924088)
chr8 (253-363)||(13396269-13396379)
chr8 (229-323)||(20824153-20824247)
chr8 (253-363)||(41665518-41665628)
chr8 (118-183)||(25090133-25090198)
chr8 (295-363)||(32266487-32266555)
[»] chr4 (28 HSPs)
chr4 (8-329)||(11587381-11587714)
chr4 (6-289)||(23162855-23163149)
chr4 (27-199)||(17401999-17402180)
chr4 (253-363)||(7403794-7403904)
chr4 (229-323)||(12697670-12697764)
chr4 (118-222)||(2822327-2822431)
chr4 (229-323)||(4548408-4548502)
chr4 (229-323)||(8360957-8361051)
chr4 (125-361)||(20002471-20002707)
chr4 (6-124)||(19740437-19740558)
chr4 (9-91)||(47686325-47686410)
chr4 (264-363)||(15740113-15740212)
chr4 (6-124)||(46145297-46145418)
chr4 (10-91)||(15739847-15739931)
chr4 (9-86)||(19754888-19754968)
chr4 (9-86)||(19784838-19784918)
chr4 (14-95)||(36223515-36223599)
chr4 (8-88)||(2822470-2822553)
chr4 (36-113)||(20788687-20788764)
chr4 (118-189)||(5148407-5148478)
chr4 (6-56)||(8890645-8890698)
chr4 (9-83)||(23643029-23643106)
chr4 (27-85)||(13271327-13271385)
chr4 (253-363)||(19755145-19755255)
chr4 (253-363)||(19784551-19784661)
chr4 (28-81)||(5148308-5148361)
chr4 (27-88)||(5790521-5790582)
chr4 (27-79)||(48242025-48242077)
[»] chr5 (31 HSPs)
chr5 (27-171)||(29142446-29142599)
chr5 (8-352)||(19255283-19255639)
chr5 (118-352)||(18359251-18359484)
chr5 (10-124)||(27117558-27117675)
chr5 (6-124)||(32228426-32228547)
chr5 (136-323)||(33385563-33385750)
chr5 (6-95)||(42927753-42927845)
chr5 (27-95)||(27166378-27166446)
chr5 (10-124)||(31641383-31641500)
chr5 (14-95)||(33169288-33169372)
chr5 (9-88)||(12824824-12824906)
chr5 (9-92)||(35984219-35984305)
chr5 (9-123)||(25824636-25824753)
chr5 (9-122)||(28536074-28536190)
chr5 (28-92)||(18359519-18359583)
chr5 (9-124)||(23238008-23238126)
chr5 (9-86)||(12820384-12820464)
chr5 (6-79)||(26072515-26072591)
chr5 (9-86)||(30732749-30732829)
chr5 (147-323)||(8300371-8300547)
chr5 (31-79)||(18148180-18148228)
chr5 (280-323)||(10776672-10776715)
chr5 (280-323)||(27766950-27766993)
chr5 (9-83)||(42513345-42513422)
chr5 (6-95)||(8941834-8941926)
chr5 (9-65)||(8227651-8227710)
chr5 (27-95)||(18090188-18090256)
chr5 (118-154)||(20209077-20209113)
chr5 (295-363)||(23238307-23238375)
chr5 (235-323)||(28535864-28535952)
chr5 (259-363)||(35983940-35984044)
[»] chr7 (16 HSPs)
chr7 (9-124)||(47876608-47876726)
chr7 (10-122)||(235838-235953)
chr7 (10-138)||(17720270-17720401)
chr7 (30-95)||(34359423-34359488)
chr7 (121-316)||(18530259-18530454)
chr7 (28-323)||(37254405-37254709)
chr7 (9-86)||(37919169-37919249)
chr7 (122-323)||(25619209-25619410)
chr7 (27-91)||(38890150-38890214)
chr7 (253-363)||(235588-235698)
chr7 (9-86)||(29967600-29967680)
chr7 (6-79)||(48394526-48394602)
chr7 (264-323)||(17720527-17720586)
chr7 (9-58)||(11277716-11277768)
chr7 (28-88)||(25619106-25619166)
chr7 (295-363)||(29967898-29967966)
[»] scaffold0161 (1 HSPs)
scaffold0161 (10-95)||(6435-6523)
[»] scaffold0369 (1 HSPs)
scaffold0369 (27-91)||(11635-11699)
[»] scaffold0511 (1 HSPs)
scaffold0511 (9-86)||(5847-5927)
[»] scaffold0034 (1 HSPs)
scaffold0034 (9-83)||(106281-106358)
[»] scaffold0472 (1 HSPs)
scaffold0472 (295-363)||(3175-3243)
[»] scaffold0179 (1 HSPs)
scaffold0179 (118-154)||(7274-7310)


Alignment Details
Target: chr2 (Bit Score: 279; Significance: 1e-156; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 8 - 368
Target Start/End: Complemental strand, 17765478 - 17765106
Alignment:
Q  8 tatgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtt 104  Q
    |||||||||||||||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17765478 tatgagtaccaaaactaaaaacaacattactagcttttaacccccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtt 17765379  T
Q  105 tctaaaaattcta---------tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaa 195  Q
    |||||||||||||         ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  17765378 tctaaaaattctaacattccgatcattccataagacccaaacacactgaagccaaatcaaatgaaaaaaagatcttcgtgatttcaagcaacctgcgtaa 17765279  T
Q  196 tgaaaaagttgcaaaaaatggtccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggc 295  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||    
T  17765278 tgaataagttgcaaaaaatggtctgaaatatgttgaggatcaaccccttcaacccaatgtcaatccctcaccaatgaccataaggcaccaaaaattgggc 17765179  T
Q  296 aagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaaccacgcctccaaaagaat 368  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||    
T  17765178 aagacaaaaacaagtgattcacatcttccacgtgaccacaaccagtgacacacaaccgcgcctccaaaggaat 17765106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 6 - 323
Target Start/End: Original strand, 28252343 - 28252671
Alignment:
Q  6 attatgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatg 102  Q
    ||||||||||||| | |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  28252343 attatgagtaccatagctaaaaacaatattactagcttttaaccaccacaaagaagatgattttactttgtctaacatttgtggtaaagagctctgcctg 28252442  T
Q  103 tttctaaaaattctatc--------attccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgta 194  Q
    |||||||||| ||||||        ||||||||| ||||||| |||||||||||||||||||||||| || ||||   |||||||| | | |||  | ||    
T  28252443 tttctaaaaactctatcgtccgctaattccataaaacccaaatacactaaagccaaatcaaatggaagaacgatcgatgtgatttccaactaccagcata 28252542  T
Q  195 atgaaaaagttgcaaaaaatggtccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattggg 294  Q
     |||| || ||||||||||||||| |  |||   | || |||||| ||||||||||  |||||  ||| |||||| ||||||||||||||||||| |||     
T  28252543 ctgaataaattgcaaaaaatggtctgccatagactaagaatcaacaccttcaacccccagccactcccgcaccaaagaccataaggcaccaaaaaatgga 28252642  T
Q  295 caagacaaaaacaagtgattcacatcttc 323  Q
    |||||||||||||| ||||||||||||||    
T  28252643 caagacaaaaacaaatgattcacatcttc 28252671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 6 - 352
Target Start/End: Original strand, 15917275 - 15917634
Alignment:
Q  6 attatgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatg 102  Q
    |||||||||||||||||||||   ||||||||||||||| ||||||||||||||| ||||||||||||| |||||||  ||||||| |||||| ||  |     
T  15917275 attatgagtaccaaaactaaagacaacattactagctttcaaccaccacaaagaatatgattttactttatctaacatatgtggtatagagctttgtcta 15917374  T
Q  103 tttctaaaaattctatcattccat---------aagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgattt-caagcaacctacg 192  Q
    || ||||| | ||| ||||||| |         || ||||||||||| | ||| |||| ||| ||||||||||||| ||| ||||| | ||| |||| |     
T  15917375 ttcctaaatagtctgtcattccgttcattccacaaaacccaaacacattgaagtcaaaccaagtggaaaaaagatcgtcgcgattttcgagccacctgca 15917474  T
Q  193 taatgaaaaagttgcaaaaaatggtccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattg 292  Q
    ||||||| || ||||||||||||||| ||||||   |||| | | |||||| |||| |  ||||| |||  |||||||| ||| || || |||||| |||    
T  15917475 taatgaataaattgcaaaaaatggtctgaaatagcctgagaaccgacccctacaacactgagccatgcctgcaccaatggccacaacgcgccaaaagttg 15917574  T
Q  293 ggcaagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaacc 352  Q
    | |||||||||||||  |||||||||||||| || || ||| ||||||||||||||||||    
T  15917575 gacaagacaaaaacatatgattcacatcttcaacatgcccacaaccagtgacacacaacc 15917634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 118 - 323
Target Start/End: Complemental strand, 11000344 - 11000139
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggt 217  Q
    ||||||||||| ||| ||||||||||||||||||||||||| || || ||||  || |||||||||| |||| | || | || || ||||| |||||| |    
T  11000344 tcattccataaaaccgaaacacactaaagccaaatcaaatgaaataaggatcgacgagatttcaagccacctgcatattcaataaattgcacaaaatgat 11000245  T
Q  218 ccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcac 317  Q
    | || |||   |||| ||| |||||||| || | |||||| |||| |||||  | ||| || |||||||||||||| ||||| || ||||| ||||||||    
T  11000244 ctgagatagcatgagaatctaccccttcgacaccaagccatgcccgcaccataggccacaatgcaccaaaaattggacaagataagaacaaatgattcac 11000145  T
Q  318 atcttc 323  Q
    ||||||    
T  11000144 atcttc 11000139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 253 - 362
Target Start/End: Original strand, 41206897 - 41207006
Alignment:
Q  253 agccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaacc 352  Q
    ||||| |||| || ||||| |||||||||||||||| |||| |||||||| ||||| ||||| |||||||| ||||| ||  | ||||||||||||||||    
T  41206897 agccatgcccgcatcaatggccataaggcaccaaaagttggacaagacaagaacaaatgattgacatcttcaacgtgcccgcatccagtgacacacaacc 41206996  T
Q  353 acgcctccaa 362  Q
     |||||||||    
T  41206997 gcgcctccaa 41207006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 41206630 - 41206738
Alignment:
Q  8 tatgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtt 104  Q
    ||||||||||||| |||||   |||||||| || |||||||||||| |||||||||||||| ||||| |||||||  |||||||||||||| ||  | ||    
T  41206630 tatgagtaccaaagctaaatacaacattacgagattttaaccaccataaagaagatgatttgactttatctaacatgtgtggtaaagagctttgtctatt 41206729  T
Q  105 tctaaaaat 113  Q
    |||||||||    
T  41206730 tctaaaaat 41206738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 44472983 - 44473065
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggta 88  Q
    ||||||||||||||||||   | ||||| ||||||| ||||||||||||||| ||||||||||||| |||||||  |||||||    
T  44472983 atgagtaccaaaactaaaggtagcattattagctttcaaccaccacaaagaatatgattttactttatctaacaggtgtggta 44473065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 323
Target Start/End: Original strand, 12645402 - 12645487
Alignment:
Q  238 accccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||||||| || | ||||||||||| |||||  | ||| || || |||||||||||||||||||||||||| ||| ||||||||||    
T  12645402 accccttcgacaccaagccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaacaaatgagtcacatcttc 12645487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 38604866 - 38604799
Alignment:
Q  28 acattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagct 95  Q
    |||||||||||||| |||||||||||| |  ||||||||||||| || ||||| ||||||| ||||||    
T  38604866 acattactagctttcaaccaccacaaaaagcatgattttactttttccaacaactgtggtatagagct 38604799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 42563108 - 42563155
Alignment:
Q  24 aaaaacattactagcttttaaccaccacaaagaagatgattttacttt 71  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||||||    
T  42563108 aaaaacattactagctttcaaccaccacaaggaatatgattttacttt 42563155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 15391765 - 15391857
Alignment:
Q  6 attatgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagct 95  Q
    |||||||||||| ||||||||  ||   ||||||||||| ||||||||||| ||| | ||||| ||||| ||||||||||| |||| ||||||    
T  15391765 attatgagtaccgaaactaaagtcagctttactagctttcaaccaccacaaggaataagatttaactttatctaacaattgcggtagagagct 15391857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 4551795 - 4551874
Alignment:
Q  10 tgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtgg 86  Q
    ||||| |||||||||||   |||||||||||| |||||||||||||| |||| |||||| ||||| ||||  ||||||||    
T  4551795 tgagtgccaaaactaaatacaacattactagcctttaaccaccacaacgaagttgatttcactttatctagtaattgtgg 4551874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 323
Target Start/End: Original strand, 14439499 - 14439703
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggt 217  Q
    ||||||||||| ||  ||||||||| ||||||||||||||| || || || |  |  |||||||||| |||| | || | || || ||||| |||||| |    
T  14439499 tcattccataaaactgaaacacactgaagccaaatcaaatgaaagaaggaacgacaagatttcaagccacctgcatattcaataaattgcacaaaatgat 14439598  T
Q  218 ccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcac 317  Q
    |  | |||   |||| ||| |||||||| || | ||||||||||| |||||  | ||| || ||| |||||||||| |||||| ||||||| ||||||||    
T  14439599 ctaagatagcatgagaatctaccccttcgacaccaagccaagcccgcaccataggccacaatgcatcaaaaattggacaagac-aaaacaaatgattcac 14439697  T
Q  318 atcttc 323  Q
    ||||||    
T  14439698 atcttc 14439703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 23290088 - 23290128
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatg 158  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  23290088 tcattccatatgacccaaacacaataaagccaaatcaaatg 23290128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 44022984 - 44023069
Alignment:
Q  6 attatgagtaccaaaactaaaaac---attactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggta 88  Q
    |||||||||||||||| |||| ||   |||||||||||| ||||||||||  | |  |||||||||||| |||||||| |||||||    
T  44022984 attatgagtaccaaaagtaaagaccacattactagctttcaaccaccacagggtatttgattttactttatctaacaactgtggta 44023069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 215
Target Start/End: Complemental strand, 33516178 - 33516081
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatg 215  Q
    |||||||||||   |||||||| || |||||||||||| ||||| | |||||  || |||||||||| |||||| || |||| || ||||| ||||||    
T  33516178 tcattccataaagtccaaacacgctgaagccaaatcaagtggaagagagatcgacgcgatttcaagccacctacatattgaataaattgcataaaatg 33516081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 12645183 - 12645235
Alignment:
Q  28 acattactagcttttaaccaccacaaagaagatgattttactttgtctaacaa 80  Q
    |||||||||||||||||||||||||| | |   ||||||||||| ||||||||    
T  12645183 acattactagcttttaaccaccacaaggtatgagattttactttatctaacaa 12645235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 12645282 - 12645322
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatg 158  Q
    ||||||||||| |||||||||||||  ||||||||||||||    
T  12645282 tcattccataaaacccaaacacactgcagccaaatcaaatg 12645322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 40176317 - 40176369
Alignment:
Q  28 acattactagcttttaaccaccacaaagaagatgattttactttgtctaacaa 80  Q
    |||||||||||||| ||||||||||  |||  |||||||||||| ||||||||    
T  40176317 acattactagctttcaaccaccacatggaatttgattttactttatctaacaa 40176369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 6 - 368
Target Start/End: Complemental strand, 15959332 - 15958957
Alignment:
Q  6 attatgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatg 102  Q
    |||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||    
T  15959332 attatgagtaccaaaactaaaaacaacattactaacttttaaccaccacaaagaagatgattttactttgtctaacatttgtggtaaagaactctgcttg 15959233  T
Q  103 tttctaaaaattctatcattcc---------ataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgt 193  Q
    ||||||||||||||||||||||         ||| | |||||  ||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  15959232 tttctaaaaattctatcattccgatcattccataggtcccaattacacttaagccaaatcaaatggaaaaaagatcttcgcgatttcaagcaacctgcgt 15959133  T
Q  194 aatgaaaaagttgcaaaaaatggtccgaaatatgttgaggatcaaccccttcaacccaaagccaagcc-ctcaccaatgaccataaggcaccaaaaattg 292  Q
    |||||| || |||| |||||||||| |||||||| ||||||| |||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||    
T  15959132 aatgaacaaattgcgaaaaatggtctgaaatatgctgaggatgaaccccttcaaccccaagccaagcctctcaccaatggccataaggcaccaaaaattg 15959033  T
Q  293 ggcaagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaaccacgcctccaaaagaat 368  Q
    ||||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||  | |||||||| ||||    
T  15959032 ggcaagataaaaacaagtgattcacatcttccacgtgcccacaatcagtgacacacaactgcacctccaaaggaat 15958957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 6 - 242
Target Start/End: Original strand, 32536517 - 32536765
Alignment:
Q  6 attatgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatg 102  Q
    ||||| |||||||||||||||||||   ||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| ||    
T  32536517 attattagtaccaaaactaaaaacaacattaatagcttttaaccaccaaaaagaagatgattttactttgtctaacatttgtggtaaagagctgtgcctg 32536616  T
Q  103 tttctaaaaattctatcattcc---------ataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgt 193  Q
    ||||||||||||||||||||||         ||| |||||||||||||| ||| ||||||||||| |||||||||||| |  |||| || |||||| |||    
T  32536617 tttctaaaaattctatcattccgatcattcgataggacccaaacacactgaagtcaaatcaaatgaaaaaaagatctttgcaattttaaacaacctgcgt 32536716  T
Q  194 aatgaaaaagttgcaaaaaatggtccgaaatatgttgaggatcaacccc 242  Q
    |||||| || |||||||||||  ||||||||||||||||||||||||||    
T  32536717 aatgaataaattgcaaaaaataatccgaaatatgttgaggatcaacccc 32536765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 27 - 323
Target Start/End: Complemental strand, 14373485 - 14373180
Alignment:
Q  27 aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttctaaaaattcta--------- 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| | ||             
T  14373485 aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacatttgtgataaagaactctgcatgtttctaaaaactatatcattccgc 14373386  T
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggt 217  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||| || ||||  ||||||||||| | |||  | || |||| || |||||||||||| |    
T  14373385 tcattccataaaacccaaaaacactgaagccaaatcaaatggaagaatgatcgacgtgatttcaaactaccagcatactgaataaattgcaaaaaatgat 14373286  T
Q  218 ccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcac 317  Q
     ||  |||   |||| |||||| ||| ||||||  ||||   ||| |||||| ||||||||||||||||||| ||| |||||||||||||| ||||| ||    
T  14373285 tcgtcatagactgagaatcaacgcctacaacccccagccgctcccgcaccaaagaccataaggcaccaaaaaatggacaagacaaaaacaaatgatttac 14373186  T
Q  318 atcttc 323  Q
    ||||||    
T  14373185 atcttc 14373180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 28 - 361
Target Start/End: Complemental strand, 20883523 - 20883184
Alignment:
Q  28 acattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttctaaaaattctatca------t 121  Q
    |||||||||||||| ||||||||||| | |  |||||||||||| ||||||||| |||||| ||| || ||   ||| | ||| |  || |||      |    
T  20883523 acattactagctttcaaccaccacaaggtatgtgattttactttatctaacaatagtggtatagaactttgacggttccgaaataacctgtcattccatt 20883424  T
Q  122 tccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggtccga 221  Q
    ||||||| ||||| ||||||| ||||||||||||||| || |||||||  || |||||||||| |||| | || | || || ||||| ||||||||| ||    
T  20883423 tccataaaacccatacacactgaagccaaatcaaatgaaataaagatcgacgggatttcaagccacctgcatattcaataaattgcacaaaatggtctga 20883324  T
Q  222 aatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatct 321  Q
     |||   |||| ||| |||||||| || | |||||| | || |||||  | ||| || ||||| |||||||| |||||||||||||  ||||||| ||||    
T  20883323 gatagcatgagaatctaccccttcgacaccaagccatgtccgcaccataggccacaatgcaccgaaaattggacaagacaaaaacatatgattcatatct 20883224  T
Q  322 tccacgtgaccagaaccagtgacacacaaccacgcctcca 361  Q
    || || || ||| | || |||||||| ||||  |||||||    
T  20883223 tcaacatgcccacatcccgtgacacaaaaccgagcctcca 20883184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 229 - 323
Target Start/End: Complemental strand, 17606617 - 17606523
Alignment:
Q  229 tgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||| ||| |||||||| || | ||||||||||| |||||| ||||| || |||||||||||||| ||||||||||| || ||||||||||||||    
T  17606617 tgagaatcgaccccttcgacaccaagccaagcccgcaccaaagaccacaatgcaccaaaaattggacaagacaaaaataaatgattcacatcttc 17606523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 118 - 323
Target Start/End: Original strand, 11462159 - 11462363
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggt 217  Q
    ||||||||||| ||||||||||||| ||||||||||||||| || |||||||  || ||||| |||| |||| | || | || || ||||| |||||| |    
T  11462159 tcattccataaaacccaaacacactgaagccaaatcaaatgaaataaagatcgacgagattttaagccacctgcatattcaataaattgcacaaaatgat 11462258  T
Q  218 ccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcac 317  Q
    | || |||   |||| ||| |||||||| || | |||||| |||| |||| ||   || || ||||| |||||||| |||||||||||||  ||||||||    
T  11462259 ctgagataacatgagaatctaccccttcgacaccaagccatgcccgcacc-ataggcacaatgcaccgaaaattggacaagacaaaaacatatgattcac 11462357  T
Q  318 atcttc 323  Q
    ||||||    
T  11462358 atcttc 11462363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 24767916 - 24767831
Alignment:
Q  29 cattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttctaaaaatt 114  Q
    |||||| |||||||||||||||||||||||||||||| ||||| |||| || |||||| |||||||| ||  | ||||||||||||    
T  24767916 cattacaagcttttaaccaccacaaagaagatgatttcactttatctagcatttgtggcaaagagctttgtctatttctaaaaatt 24767831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 5734756 - 5734638
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgttt 105  Q
    ||||||||||||||||||   |||||||| ||| ||||||||||||||||||| |||||| ||||| |||| || |||||| ||||| || ||  | |||    
T  5734756 atgagtaccaaaactaaatacaacattacaagcctttaaccaccacaaagaagttgatttcactttatctagcatttgtggcaaagaactttgtctattt 5734657  T
Q  106 ctaaaaattctatcattcc 124  Q
    ||||||||  |||||||||    
T  5734656 ctaaaaatcttatcattcc 5734638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 18651748 - 18651631
Alignment:
Q  10 tgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttc 106  Q
    |||||||||||||||||   |||||||  |||||||||||||||||||||||||||| | || || |||| || |||||| |||||||| ||  | ||||    
T  18651748 tgagtaccaaaactaaacacaacattatgagcttttaaccaccacaaagaagatgatataaccttatctagcatttgtggcaaagagctttgtctatttc 18651649  T
Q  107 taaaaattctatcattcc 124  Q
    |||||||| | |||||||    
T  18651648 taaaaattttgtcattcc 18651631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 13937322 - 13937414
Alignment:
Q  6 attatgagtaccaaaactaaaaac---attactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagct 95  Q
    ||||||| ||||||||||||||||   |||||||||||| | ||||||||| ||| ||||||||||||| |||||||| ||  ||||||||||    
T  13937322 attatgaataccaaaactaaaaactacattactagctttcatccaccacaaggaacatgattttactttatctaacaaatgcagtaaagagct 13937414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 323
Target Start/End: Complemental strand, 21630392 - 21630298
Alignment:
Q  229 tgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||| ||| |||||||| || | ||||||||||| |||||| | ||| || |||||||||||||| ||||||||||| || ||||||||||||||    
T  21630392 tgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttc 21630298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 12733751 - 12733830
Alignment:
Q  10 tgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtgg 86  Q
    ||||| |||||||||||   |||||||||||| ||||||||||||||||||| |||||| ||||| |||| |||||||||    
T  12733751 tgagtgccaaaactaaatacaacattactagcctttaaccaccacaaagaagttgatttcactttatctagcaattgtgg 12733830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 323
Target Start/End: Complemental strand, 17579472 - 17579270
Alignment:
Q  121 ttccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggtccg 220  Q
    |||||||| ||| | ||||| |||| |||||||||||| || || ||||  || |||||||||| |||| | || | || || ||||| ||| || || |    
T  17579472 ttccataaaaccgagacacattaaaaccaaatcaaatgaaataatgatcgacgcgatttcaagccacctgcatattcaataaattgcacaaagtgatctg 17579373  T
Q  221 aaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatc 320  Q
    | |||   |||| ||| |||||||| || | ||||||||||| |||||  | ||| |||||||||||| | || ||||||||||| || |||||||||||    
T  17579372 agatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccagaggccacaaggcaccaaaagtcggacaagacaaaaataaatgattcacatc 17579273  T
Q  321 ttc 323  Q
    |||    
T  17579272 ttc 17579270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 12429123 - 12429058
Alignment:
Q  30 attactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagct 95  Q
    |||||||||||| ||| ||||||||||| ||||||||||||| |||||||  ||||||| ||||||    
T  12429123 attactagctttcaactaccacaaagaatatgattttactttatctaacatatgtggtatagagct 12429058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 323
Target Start/End: Complemental strand, 17573938 - 17573844
Alignment:
Q  229 tgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||| ||| |||||||| || | ||||||||||| |||||  | ||| |||||||||||| | || ||||||||||| || ||||||||||||||    
T  17573938 tgagaatcgaccccttcgacaccaagccaagcccgcaccagaggccacaaggcaccaaaagtcggacaagacaaaaataaatgattcacatcttc 17573844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 18789394 - 18789314
Alignment:
Q  9 atgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtgg 86  Q
    |||||||||||||||||| |||   || ||||| ||||||||||||||||||| |||||| ||||| |||| || ||||||    
T  18789394 atgagtaccaaaactaaatacagcattgctagcctttaaccaccacaaagaagttgatttcactttatctagcatttgtgg 18789314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 363
Target Start/End: Complemental strand, 24767683 - 24767573
Alignment:
Q  253 agccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaacc 352  Q
    ||||| |||| ||||||||  |||||||||| |||| |||| |||||||||||||| | ||| |||||||| ||||  ||  |||||   ||||||||||    
T  24767683 agccatgcccgcaccaatggtcataaggcactaaaagttggacaagacaaaaacaaattattaacatcttcaacgttcccgcaaccaaaaacacacaacc 24767584  T
Q  353 acgcctccaaa 363  Q
     ||||||||||    
T  24767583 gcgcctccaaa 24767573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 17330621 - 17330669
Alignment:
Q  31 ttactagcttttaaccaccacaaagaagatgattttactttgtctaaca 79  Q
    |||||| |||| ||||||||||||||| ||||||||||||| |||||||    
T  17330621 ttactaactttcaaccaccacaaagaatatgattttactttatctaaca 17330669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 323
Target Start/End: Complemental strand, 10577481 - 10577438
Alignment:
Q  280 gcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||||||||||||| ||||||||||| || ||||||||||||||    
T  10577481 gcaccaaaaattggacaagacaaaaataaatgattcacatcttc 10577438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 21167851 - 21167935
Alignment:
Q  10 tgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaag 91  Q
    |||||||||||||||||   |||||| ||||| |||| |||||||||||||| || ||| ||||| |||| || |||||| ||||    
T  21167851 tgagtaccaaaactaaatacaacattgctagcctttagccaccacaaagaagttggtttcactttatctagcatttgtggcaaag 21167935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 32797659 - 32797615
Alignment:
Q  35 tagcttttaaccaccacaaagaagatgattttactttgtctaaca 79  Q
    ||||||| |||||||| |||||||||  |||||||||||||||||    
T  32797659 tagctttcaaccaccaaaaagaagatatttttactttgtctaaca 32797615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 6 - 368
Target Start/End: Complemental strand, 26771504 - 26771133
Alignment:
Q  6 attatgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatg 102  Q
    |||||||||| ||||||||||||||   ||||||| | ||||||||   |||||||||||||||||||||||||||| ||| ||||||||| ||| | ||    
T  26771504 attatgagtatcaaaactaaaaacaacattactagttgttaaccac---aaagaagatgattttactttgtctaacatttgaggtaaagagttcttcctg 26771408  T
Q  103 tttctaaaaattctatcattcc---------ataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgt 193  Q
    ||||||||||||||||||||||         ||| |||||||||||||| |||||||||||||||||||||| ||||||| ||||| ||||||||| |||    
T  26771407 tttctaaaaattctatcattccgatcattccataggacccaaacacactgaagccaaatcaaatggaaaaaaaatcttcgcgattttaagcaacctgcgt 26771308  T
Q  194 aatgaaaaagttgcaaaaaatggtccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgg 293  Q
    |||||| || ||||||||||| |||||||||||| |||||||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||||||    
T  26771307 aatgaataaattgcaaaaaattgtccgaaatatgctgaggatcaaccccttcaaccccaaaccaagccctcaccaatggccataaggcactaaaaattgg 26771208  T
Q  294 gcaagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaaccacgcctccaaaagaat 368  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  | |||||||| ||||    
T  26771207 gcaagacaaaaacaagtgattcacatcttccacgtgcccacaaccagtgacacacaactgcacctccaaaggaat 26771133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 363
Target Start/End: Complemental strand, 40931042 - 40930677
Alignment:
Q  10 tgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttc 106  Q
    |||||||| ||||||||||||   |||| ||| ||||||||||||||||||| |||||| ||||| |||| || |||||| ||||| || ||  | ||||    
T  40931042 tgagtaccgaaactaaaaacaacattacaagcctttaaccaccacaaagaagttgatttcactttatctagcatttgtggcaaagaactttgtctatttc 40930943  T
Q  107 taaaaattctatcatt---------ccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatg 197  Q
    ||||||| ||||||||         ||| || ||  |||||||    |||||||||||||| || ||||| | ||    | || | |||||| | ||||     
T  40930942 taaaaatcctatcatttcgttcattccacaacactgaaacacaaagcagccaaatcaaatgaaagaaagaacgtcaccctctcgaacaacctgcataatt 40930843  T
Q  198 aaaaagttgcaaaaaatggtccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaa 297  Q
    || || |||||||||||| |||||| |   |||||  || |||||| | || | |||||| |||| ||||| || ||||||||||| |||| |||  |||    
T  40930842 aataaattgcaaaaaatgatccgaagttgattgagagtcgacccctaccactccaagccatgcccgcaccattggccataaggcactaaaagttgaacaa 40930743  T
Q  298 gacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaaccacgcctccaaa 363  Q
    ||||||||||| ||||| |||||||| ||||  ||| ||||||  |||||||||| ||||||||||    
T  40930742 gacaaaaacaaatgattgacatcttcgacgttcccacaaccagaaacacacaaccgcgcctccaaa 40930677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 963681 - 963589
Alignment:
Q  6 attatgagtaccaaaactaaaaac---attactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagct 95  Q
    ||||||| ||||||||||||||||   |||||||||||| | ||||||||| ||| ||||||||||||| |||||||| || |||||||||||    
T  963681 attatgaataccaaaactaaaaactacattactagctttcatccaccacaaggaacatgattttactttatctaacaaatgcggtaaagagct 963589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 323
Target Start/End: Original strand, 33496404 - 33496498
Alignment:
Q  229 tgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||| ||| |||||||| || | ||||||||||| |||||| | ||| || |||||||||||||| ||||||||||| || ||||||||||||||    
T  33496404 tgagaatctaccccttcgacaccaagccaagcccgcaccaaaggccacaatgcaccaaaaattggacaagacaaaaataaatgattcacatcttc 33496498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 323
Target Start/End: Complemental strand, 36801466 - 36801264
Alignment:
Q  121 ttccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggtccg 220  Q
    |||||||| ||| | |||||||  | |||||||||||| || || ||||  || |||||||||| |||| | || | || || ||||| |||||| || |    
T  36801466 ttccataaaaccgagacacactgtaaccaaatcaaatgaaataaggatcgacgcgatttcaagccacctgcatattcaataaattgcacaaaatgatctg 36801367  T
Q  221 aaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatc 320  Q
    | |||   |||| ||| |||||||| || | ||||||||||| |||||| | ||| || |||||||||||||| ||||||||||| || ||||| |||||    
T  36801366 agatagcatgagaatctaccccttcgacaccaagccaagcccgcaccaaaggccacaatgcaccaaaaattggacaagacaaaaataaatgatttacatc 36801267  T
Q  321 ttc 323  Q
    |||    
T  36801266 ttc 36801264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 50651858 - 50651777
Alignment:
Q  14 taccaaaactaaaaac---attactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaaga 92  Q
    ||||||||||||||||   |||||||||||| ||||||||||| ||| | |||||||||||  ||||||| |||||||||||    
T  50651858 taccaaaactaaaaactacattactagctttcaaccaccacaaggaataagattttactttacctaacaaatgtggtaaaga 50651777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 322
Target Start/End: Complemental strand, 29524053 - 29523935
Alignment:
Q  204 ttgcaaaaaatggtccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaa 303  Q
    ||||| |||||| || || ||||  |||| ||| |||||||| || | ||||||||||| |||||| | ||| || |||||||||||||| ||||||||     
T  29524053 ttgcacaaaatgatctgagatattatgagaatcgaccccttcgacaccaagccaagcccacaccaaaggccacaatgcaccaaaaattggacaagacaag 29523954  T
Q  304 aacaagtgattcacatctt 322  Q
    || || |||||||||||||    
T  29523953 aataaatgattcacatctt 29523935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 323
Target Start/End: Original strand, 11203681 - 11203770
Alignment:
Q  234 atcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    ||||||||| || || | ||||||||||| |||||| | ||| || | |||||||||||| ||||||||||| || ||||||||||||||    
T  11203681 atcaaccccgtcgacaccaagccaagcccgcaccaaaggccacaatgaaccaaaaattggacaagacaaaaataaatgattcacatcttc 11203770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 7312404 - 7312482
Alignment:
Q  11 gagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtgg 86  Q
    |||| |||||||||||   |||||||||||| |||||||||||||| |||| |||||| ||||| |||| |||||||||    
T  7312404 gagtgccaaaactaaatacaacattactagcctttaaccaccacaacgaagttgatttcactttatctagcaattgtgg 7312482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 34333330 - 34333212
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgttt 105  Q
    ||||||||||||||||||   ||||||  |||| ||||||||||||||||||| |||||| ||||| |||| || |||||| |||   || ||  | |||    
T  34333330 atgagtaccaaaactaaatacaacattgttagcctttaaccaccacaaagaagttgatttcactttatctagcatttgtggcaaaatactttgtctattt 34333231  T
Q  106 ctaaaaattctatcattcc 124  Q
    |||||||| ||||||||||    
T  34333230 ctaaaaatcctatcattcc 34333212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 15312207 - 15312280
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaaca 79  Q
    ||||||||| ||||||||   ||||||||||||||| ||||||||||| ||| ||||||||| ||| |||||||    
T  15312207 atgagtaccgaaactaaatacaacattactagctttcaaccaccacaaggaatatgattttagtttatctaaca 15312280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 19890428 - 19890495
Alignment:
Q  122 tccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacct 189  Q
    ||||||| ||||||||||||| ||||||||||||||| || |||||||  || |||||||||| ||||    
T  19890428 tccataaaacccaaacacactgaagccaaatcaaatgaaataaagatcgacgggatttcaagccacct 19890495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 19920723 - 19920664
Alignment:
Q  27 aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtgg 86  Q
    |||||| |||||||||||||||||||| | || |||||| ||||| ||||||||||||||    
T  19920723 aacatttctagcttttaaccaccacaacgcagttgatttcactttatctaacaattgtgg 19920664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 3140474 - 3140566
Alignment:
Q  6 attatgagtaccaaaactaaaaac---attactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagct 95  Q
    ||||||| ||||||||||||||||   |||||||||||| |  ||| ||||  || ||||||||||||| |||||||| || |||||||||||    
T  3140474 attatgaataccaaaactaaaaactacattactagctttcagtcacgacaagaaacatgattttactttatctaacaaatgcggtaaagagct 3140566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 323
Target Start/End: Complemental strand, 35214654 - 35214560
Alignment:
Q  229 tgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||| ||| |||||||| || | |||||| |||| |||||  | ||| || |||||||||||||| |||||||| ||||| ||||||||||||||    
T  35214654 tgagaatctaccccttcgacaccaagccatgcccgcaccataggccacaatgcaccaaaaattggacaagacaagaacaaatgattcacatcttc 35214560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 2363902 - 2363979
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattg 83  Q
    |||||| |||||||||||   |||||||||||| |||||||||||||| |||| | |||| ||||| |||| ||||||    
T  2363902 atgagtgccaaaactaaatacaacattactagcctttaaccaccacaacgaagttaatttcactttatctagcaattg 2363979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 323
Target Start/End: Complemental strand, 12342485 - 12342414
Alignment:
Q  252 aagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    ||||||||||| |||||| | ||| || |||||||||||||| ||||| || || || ||||||||||||||    
T  12342485 aagccaagcccgcaccaaaggccacaatgcaccaaaaattggacaagagaagaataaatgattcacatcttc 12342414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 323
Target Start/End: Complemental strand, 7031300 - 7031206
Alignment:
Q  229 tgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||| ||| |||||||| || | ||||||||||| |||||  | ||| || ||||||||| | || ||||||||||| || ||||||||||||||    
T  7031300 tgagaatcgaccccttcgacaccaagccaagcccgcaccagaggccacaaagcaccaaaagtcggacaagacaaaaataaatgattcacatcttc 7031206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 17098394 - 17098318
Alignment:
Q  6 attatgagtaccaaaactaaaaacat---tactagcttttaaccaccacaaagaagatgattttactttgtctaaca 79  Q
    ||||||||||| ||||||||| ||||   |||||| ||| ||||||||||| ||| ||||||||||||  |||||||    
T  17098394 attatgagtactaaaactaaagacatctttactagatttcaaccaccacaaggaatatgattttacttcatctaaca 17098318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 363
Target Start/End: Complemental strand, 34333074 - 34332964
Alignment:
Q  253 agccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaacc 352  Q
    ||||| |||| ||||| || |||||| |||| |||| ||   |||||||||||||| ||||| |||||||| ||||  ||| | ||||  ||||||||||    
T  34333074 agccatgcccgcaccattggccataatgcactaaaagttacacaagacaaaaacaaatgattaacatcttcaacgttcccacatccagaaacacacaacc 34332975  T
Q  353 acgcctccaaa 363  Q
     ||||||||||    
T  34332974 gcgcctccaaa 34332964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 48570433 - 48570331
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggt 217  Q
    ||||||||||| | || |||||||| |||||||||||| ||||| | |||||  || |||||||||| |||| | || |||| || ||||| |||||| |    
T  48570433 tcattccataaaatccgaacacactgaagccaaatcaagtggaagagagatcgacgcgatttcaagccacctgcatattgaataaattgcataaaatgat 48570334  T
Q  218 ccg 220  Q
    |||    
T  48570333 ccg 48570331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 11203469 - 11203526
Alignment:
Q  31 ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggta 88  Q
    ||||||||||| ||||||||||| | |  |||||||||||| ||||||||| ||||||    
T  11203469 ttactagctttcaaccaccacaaggtatttgattttactttatctaacaatagtggta 11203526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 10313003 - 10313061
Alignment:
Q  9 atgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgatt 64  Q
    |||||||||||||||||| |||   ||||  |||||||||||||||||||||| |||||    
T  10313003 atgagtaccaaaactaaatacaacgttacacgcttttaaccaccacaaagaagttgatt 10313061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 11310424 - 11310384
Alignment:
Q  283 ccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||||| ||||||||||||||||||| ||| ||||||||||    
T  11310424 ccaaaatttgggcaagacaaaaacaaatgagtcacatcttc 11310384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 15827336 - 15827394
Alignment:
Q  9 atgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgatt 64  Q
    |||||||||||||||||| |||   || | ||||||||||||||||||||||| |||||    
T  15827336 atgagtaccaaaactaaatacagcattgcaagcttttaaccaccacaaagaagttgatt 15827394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 19890325 - 19890385
Alignment:
Q  28 acattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggta 88  Q
    |||||||||||||| ||||||||||| |    |||||||||||| ||||||||| ||||||    
T  19890325 acattactagctttcaaccaccacaaggtgtgtgattttactttatctaacaatagtggta 19890385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 145; Significance: 3e-76; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 27 - 323
Target Start/End: Complemental strand, 47623559 - 47623264
Alignment:
Q  27 aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttctaaaaattctatcattccat 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||| |||||||||||      
T  47623559 aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacatttgtggtaaagagctctgcctctttctaaaaactctatcattccgc 47623460  T
Q  127 aagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggtccgaaatat 226  Q
    || ||||||| ||||  |||||||||||||||||| || ||||  ||||||||||| | |||  | || |||| || |||||||||||||||||  |||     
T  47623459 aaaacccaaatacac-gaagccaaatcaaatggaagaacgatcgacgtgatttcaaactaccagcatactgaataaattgcaaaaaatggtccgccataa 47623361  T
Q  227 gttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
      |||| |||| | ||||||||||  |||||  |||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  47623360 actgagaatcagcgccttcaacccccagccactccctcaccaaagaccataaggcaccaaaaaatgggcaagacagaaacaagtgattcacatcttc 47623264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 13351936 - 13352060
Alignment:
Q  6 attatgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatg 102  Q
    ||||||||||||||| |||||   |||||||| |||||||||||||||||||||| || |||| |||||||||| || |||||| |||||||| ||  |     
T  13351936 attatgagtaccaaagctaaatacaacattacgagcttttaaccaccacaaagaaaattatttaactttgtctagcatttgtggcaaagagctttgtcta 13352035  T
Q  103 tttctaaaaattctatcattccata 127  Q
    ||||||||||| |||||||||||||    
T  13352036 tttctaaaaatcctatcattccata 13352060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 323
Target Start/End: Original strand, 43388224 - 43388318
Alignment:
Q  229 tgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||| ||| |||||||| || | ||||||||||| |||||| | ||| || |||||||||||||| ||||||||||| || ||||||||||||||    
T  43388224 tgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaatgcaccaaaaattggacaagacaaaaataaatgattcacatcttc 43388318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 19161189 - 19161238
Alignment:
Q  73 tctaacaattgtggtaaagagctctgcatgtttctaaaaattctatcatt 122  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  19161189 tctaacatttgtggtaaagagctctgcatatttctaaaaattctatcatt 19161238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 26059516 - 26059634
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgttt 105  Q
    ||||||||||||||||||   |||||| ||||| ||||||||||||||||||| |||||| ||||| |||| || |||||| ||||  |  ||  | |||    
T  26059516 atgagtaccaaaactaaatacaacattgctagcctttaaccaccacaaagaagttgatttcactttatctagcatttgtggcaaagtacattgtctattt 26059615  T
Q  106 ctaaaaattctatcattcc 124  Q
    |||||||| ||||||||||    
T  26059616 ctaaaaatcctatcattcc 26059634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 4646573 - 4646500
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaaca 79  Q
    ||||||||||| ||||||   | ||||||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  4646573 atgagtaccaagactaaaggtagcattactagctttcaaccaccacaaagaatatgattttactttatctaaca 4646500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 6259443 - 6259560
Alignment:
Q  10 tgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttc 106  Q
    |||||||||||||||||   |||||| ||||| |||| |||||||||||||| |||||| ||||| |||| || |||||| ||||  || ||  | ||||    
T  6259443 tgagtaccaaaactaaatacaacattgctagcctttagccaccacaaagaagttgatttcactttatctagcatttgtggcaaagtactttgtctatttc 6259542  T
Q  107 taaaaattctatcattcc 124  Q
    ||||||| ||||||||||    
T  6259543 taaaaatcctatcattcc 6259560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 6478141 - 6478217
Alignment:
Q  6 attatgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaaca 79  Q
    |||||||||| ||||||||||||||   ||| ||||||||| ||||||||| ||| ||||||||||||| |||||||    
T  6478141 attatgagtatcaaaactaaaaacaacattattagcttttagccaccacaaggaatatgattttactttatctaaca 6478217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 11909620 - 11909540
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtgg 86  Q
    |||||| |||||||||||   |||||||||||| |||||||||||||| |||| |||||| ||||| |||| |||||||||    
T  11909620 atgagtgccaaaactaaatacaacattactagcctttaaccaccacaacgaagttgatttcactttatctagcaattgtgg 11909540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 28351376 - 28351440
Alignment:
Q  31 ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagct 95  Q
    ||||||||||| ||||||||||| ||| ||||||||||||| |||||||| ||||| | ||||||    
T  28351376 ttactagctttcaaccaccacaatgaatatgattttactttatctaacaaatgtggaatagagct 28351440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 12813698 - 12813639
Alignment:
Q  27 aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtgg 86  Q
    |||||| ||||| ||||||||||||||||||| |||||| ||||| ||||||| ||||||    
T  12813698 aacattgctagcctttaaccaccacaaagaagttgatttcactttatctaacatttgtgg 12813639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 51052105 - 51052185
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtgg 86  Q
    |||||| |||||||||||   |||||||||||  |||||||||||||| |||| |||||| ||||| |||| |||||||||    
T  51052105 atgagtgccaaaactaaatacaacattactagtctttaaccaccacaacgaagttgatttcactttatctagcaattgtgg 51052185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 4842024 - 4842102
Alignment:
Q  9 atgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgt 84  Q
    |||| ||||||||||||| |||   || ||||| ||||||||||||||||||| |||||| ||||| ||||||| ||||    
T  4842024 atgaataccaaaactaaatacaggattgctagcctttaaccaccacaaagaagttgatttcactttatctaacatttgt 4842102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 24547584 - 24547522
Alignment:
Q  6 attatgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattt 65  Q
    ||||||||||||||||||||| |||   |||| ||||||||||||| ||||||||| ||||||    
T  24547584 attatgagtaccaaaactaaatacagcattacaagcttttaaccactacaaagaagttgattt 24547522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 37192420 - 37192360
Alignment:
Q  28 acattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggta 88  Q
    |||||||||||||| ||||||||||| | |  |||||||||||| ||||||||| ||||||    
T  37192420 acattactagctttcaaccaccacaaggtatgtgattttactttatctaacaatagtggta 37192360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 323
Target Start/End: Complemental strand, 37191578 - 37191399
Alignment:
Q  144 aagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggtccgaaatatgttgaggatcaacccct 243  Q
    ||||||||||||||| || |||||||  || |||||||||| |||| | || |  | || ||||| |||||| || || |||   |||| ||| ||||||    
T  37191578 aagccaaatcaaatgaaataaagatcgacgggatttcaagccacctgcatattcgataaattgcacaaaatgatctgagataacatgagaatctacccct 37191479  T
Q  244 tcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |  || | ||||||  ||| |||||  | |||||| ||||| |||||||| |||||||||||||  ||||||||||||||    
T  37191478 ttgacaccaagccattcccgcaccataggccataatgcaccgaaaattggacaagacaaaaacatatgattcacatcttc 37191399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 323
Target Start/End: Complemental strand, 16918092 - 16917998
Alignment:
Q  229 tgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||| ||| |||||||| || | ||||||||||| |||||  | ||| || ||||||||| | || ||||||||||| || ||||||||||||||    
T  16918092 tgagaatcgaccccttcgacaccaagccaagcccgcaccagaggccacaaagcaccaaaagtcggacaagacaaaaataaatgattcacatcttc 16917998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 51994122 - 51994057
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaag 183  Q
    ||||||||||  ||||||||||||| |||||||||||| ||||| | |||||  || |||||||||    
T  51994122 tcattccatataacccaaacacactgaagccaaatcaagtggaagagagatcgacgcgatttcaag 51994057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 2490859 - 2490923
Alignment:
Q  28 acattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaaga 92  Q
    ||||||||| |||| | ||||||||  ||| | ||||||||||| |||||||| |||||||||||    
T  2490859 acattactaactttcagccaccacagggaataagattttactttatctaacaaatgtggtaaaga 2490923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 6050227 - 6050297
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtcta 76  Q
    |||||| |||||||||||   |||||||||||| |||||||||||||| |||| | |||| ||||| ||||    
T  6050227 atgagtgccaaaactaaatacaacattactagcctttaaccaccacaacgaagttaatttcactttatcta 6050297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 23635212 - 23635164
Alignment:
Q  31 ttactagcttttaaccaccacaaagaagatgattttactttgtctaaca 79  Q
    ||||| ||||| |||||||||| |||| ||||||||||||| |||||||    
T  23635212 ttactcgctttcaaccaccacagagaatatgattttactttatctaaca 23635164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 26720445 - 26720481
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatca 154  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  26720445 tcattccataaaacccaaacacacaaaagccaaatca 26720481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 3e-73; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 6 - 319
Target Start/End: Complemental strand, 34137481 - 34137156
Alignment:
Q  6 attatgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatg 102  Q
    ||||||||||||||| |||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| | |     
T  34137481 attatgagtaccaaagctaaaaacaacattactagcttttaaccaccacaatgaagatgattttactttgtctaacatttgtcgtaaagagctctactta 34137382  T
Q  103 tttctaaaaattctatcattcc---------ataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgt 193  Q
    |||||||||||| | |||||||         ||||||||  || ||||| |||||||||||||||||  ||| |||| || |||||||| |||||| | |    
T  34137381 tttctaaaaattatgtcattccgctcattctataagaccgcaatacactgaagccaaatcaaatggagcaaatatctacgggatttcaaacaacctgcat 34137282  T
Q  194 aatgaaaaagttgcaaaaaatggtccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgg 293  Q
    |||||| || |||||||||||||||| ||||||| ||||| |||||  |||||||||  |||||  |||||||||||| ||| |||||||||||| ||||    
T  34137281 aatgaataaattgcaaaaaatggtccaaaatatgctgagggtcaacagcttcaacccctagccactccctcaccaatggccacaaggcaccaaaatttgg 34137182  T
Q  294 gcaagacaaaaacaagtgattcacat 319  Q
    ||||||||||||||||||||||||||    
T  34137181 gcaagacaaaaacaagtgattcacat 34137156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 118 - 352
Target Start/End: Original strand, 43270196 - 43270430
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggt 217  Q
    ||||||||||| ||| ||||||||| ||||||||| ||||| || || || |  || |||||||||| |||| | || | || || ||||| |||||| |    
T  43270196 tcattccataacaccgaaacacactgaagccaaattaaatgaaataaggaacgacgagatttcaagccacctgcatattcaataaattgcacaaaatgat 43270295  T
Q  218 ccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcac 317  Q
    | || |||   |||| ||| |||||||| || | ||||||||||| |||||  ||||| || |||||||||||||| |||||||||||||| ||||||||    
T  43270296 ctgagatagcatgagaatctaccccttcgacaccaagccaagcccgcaccatagaccacaatgcaccaaaaattggacaagacaaaaacaaatgattcac 43270395  T
Q  318 atcttccacgtgaccagaaccagtgacacacaacc 352  Q
    |||||| || || ||| |||| || ||||| ||||    
T  43270396 atcttcaacctgcccacaacccgttacacaaaacc 43270430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 121 - 323
Target Start/End: Original strand, 2170089 - 2170291
Alignment:
Q  121 ttccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggtccg 220  Q
    |||||||| ||| || |||||| ||||||||||||||| || || ||||  || |||||||||| |||| | || | || || ||||| |||||| || |    
T  2170089 ttccataaaaccgaagcacactgaagccaaatcaaatgaaataaggatcgacgagatttcaagccacctgcatattcaataaattgcacaaaatgatctg 2170188  T
Q  221 aaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatc 320  Q
    | |||   |||| ||| |||||||| || | ||||||||||| |||||  | ||| || |||||||||||||| |||||||||||||| |||||||||||    
T  2170189 agatagcatgagaatctaccccttcgacaccaagccaagcccgcaccataggccacaatgcaccaaaaattggacaagacaaaaacaaatgattcacatc 2170288  T
Q  321 ttc 323  Q
    |||    
T  2170289 ttc 2170291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 368
Target Start/End: Original strand, 5181315 - 5181666
Alignment:
Q  27 aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttctaaaaattctatca------ 120  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| |||||||  ||||||||||| || |   | |||||||| ||  |||||          
T  5181315 aacattactaacttttaaccaccacaaataagatgattttactttatctaacatatgtggtaaagaactttctctatttctaaatatcatatcatttcgt 5181414  T
Q  121 ---ttccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaa-aaagttgcaaaaaatgg 216  Q
       ||||| || ||| ||||||| | |||||||||||| |  ||||| |||| ||| ||| || |||||||| |||||| || ||| |||||||||||||    
T  5181415 tcgttccacaaaacctaaacacattgaagccaaatcaagtaaaaaaaggatcgtcgcgatctcgagcaacctgcgtaattaataaatttgcaaaaaatgg 5181514  T
Q  217 tccgaaatatgt-tgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattc 315  Q
    |  | | | ||| ||||  || |||||| | || |  ||||| |||  |||||||| ||| |||||||||||| ||||||||||||||||||  ||||||    
T  5181515 tttgtagt-tgtctgagagtcgacccctaccacaccgagccatgcctacaccaatggccacaaggcaccaaaagttgggcaagacaaaaacatatgattc 5181613  T
Q  316 acatcttccacgtgaccagaaccagtgacacacaaccacgcctccaaaagaat 368  Q
     ||||||| || || ||  | | ||||| |||||||| |||||||||| ||||    
T  5181614 tcatcttcaacttgcccgcatctagtgatacacaaccgcgcctccaaaggaat 5181666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 229 - 323
Target Start/End: Original strand, 37433989 - 37434083
Alignment:
Q  229 tgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||| ||| |||||||| || ||||||||||||| |||||| | ||| || |||||||||||||| ||||||||||| || ||||||||||||||    
T  37433989 tgagaatcgaccccttcgacacaaagccaagcccgcaccaaaggccacaatgcaccaaaaattggacaagacaaaaataaatgattcacatcttc 37434083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 323
Target Start/End: Original strand, 17699231 - 17699433
Alignment:
Q  121 ttccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggtccg 220  Q
    |||||||| ||| | ||||||| || |||||||||||| || || ||||  ||  ||||||||| |||| | || | || || ||||| |||||| || |    
T  17699231 ttccataaaaccgagacacactgaaaccaaatcaaatgaaataaggatcggcgcaatttcaagccacctgcatattcaataaattgcacaaaatgatctg 17699330  T
Q  221 aaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatc 320  Q
    | |||   |||| ||| |||||||| || | ||||||||||| |||||| |  || || |||||||||||||| ||||||||||| || |||||||||||    
T  17699331 agatagcatgagaatctaccccttcgacaccaagccaagcccgcaccaaaggtcacaatgcaccaaaaattggacaagacaaaaataaatgattcacatc 17699430  T
Q  321 ttc 323  Q
    |||    
T  17699431 ttc 17699433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 13396013 - 13396131
Alignment:
Q  9 atgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgttt 105  Q
    |||||||||||||||||| |||   || ||||| ||||||||||||||||||| |||||| ||||| ||||||| |||||| | ||  || ||  | |||    
T  13396013 atgagtaccaaaactaaatacagcattgctagcctttaaccaccacaaagaagttgatttcactttatctaacatttgtggcagagtactttgtctattt 13396112  T
Q  106 ctaaaaattctatcattcc 124  Q
    |||||||| ||||||||||    
T  13396113 ctaaaaatcctatcattcc 13396131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 41665884 - 41665766
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgttt 105  Q
    ||||||||||||||||||   |||||| ||||| ||||||||||||||||||| |||||| ||||| ||||| | |||||| | ||  || ||  | |||    
T  41665884 atgagtaccaaaactaaatacaacattgctagcctttaaccaccacaaagaagttgatttcactttatctaaaatttgtggcagagtactttgtctattt 41665785  T
Q  106 ctaaaaattctatcattcc 124  Q
    |||||||| ||||||||||    
T  41665784 ctaaaaatcctatcattcc 41665766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 365
Target Start/End: Original strand, 2529632 - 2529879
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggt 217  Q
    ||||||||||| |||||||| ||||  |||||||||||||| || || ||||  || ||||||||||  ||| | || | || || ||||| |||||| |    
T  2529632 tcattccataaaacccaaacgcactgcagccaaatcaaatgaaataaggatcgacgggatttcaagcctcctgcatattcaataaattgcataaaatgat 2529731  T
Q  218 ccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcac 317  Q
    | ||||||    ||| ||| || ||||| || | ||||||||||| |||||  | ||| || |  || ||||||||||||||||||||||| ||| ||||    
T  2529732 ctgaaatagcaagagaatctactccttcgacaccaagccaagcccgcaccataggccacaatgtgccgaaaattgggcaagacaaaaacaaatgagtcac 2529831  T
Q  318 atcttccacgtgaccagaaccagtgacacacaaccacgcctccaaaag 365  Q
    |||||| || || ||| | || || ||||| ||||  |||||||||||    
T  2529832 atcttcaacatgcccacaccctgtaacacaaaaccgagcctccaaaag 2529879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 9922227 - 9922312
Alignment:
Q  10 tgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaaga 92  Q
    |||||||||||||||||||||   |||| ||| ||||||||||||||||||| |||||| ||||| |||| || |||||| |||||    
T  9922227 tgagtaccaaaactaaaaacaacattacaagcctttaaccaccacaaagaagttgatttcactttatctagcatttgtggcaaaga 9922312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 361
Target Start/End: Original strand, 13199869 - 13200112
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggt 217  Q
    ||||||||||| || ||||||||||  ||||||||||||||||| || ||||  ||  |||||||||  ||| | || | || || ||||| |||||| |    
T  13199869 tcattccataaaacgcaaacacactgcagccaaatcaaatggaataaggatcgacggaatttcaagcctcctgcatattcaataaattgcataaaatgat 13199968  T
Q  218 ccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcac 317  Q
    | ||||||    ||| ||| ||  |||| || | ||||||||||| |||||  | ||| || || |||||||||||||||||||||||||  ||| ||||    
T  13199969 ctgaaataacaagagaatctacatcttcgacaccaagccaagcccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaacatatgagtcac 13200068  T
Q  318 atcttccacgtgaccagaaccagtgacacacaaccacgcctcca 361  Q
    |||||| || || ||| | ||||| ||||| ||||  |||||||    
T  13200069 atcttcaacatgcccacacccagtaacacaaaaccgagcctcca 13200112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 171729 - 171846
Alignment:
Q  10 tgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttc 106  Q
    ||||| |||||||||||   |||||||||||| |||||||| |||||||||| |||||| ||||| |||| |||| |||| ||||  |||||  | ||||    
T  171729 tgagtgccaaaactaaatacaacattactagcctttaaccatcacaaagaagttgatttcactttatctagcaatagtggcaaagtactctgtctatttc 171828  T
Q  107 taaaaattctatcattcc 124  Q
     |||||  ||||||||||    
T  171829 gaaaaagcctatcattcc 171846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 361
Target Start/End: Original strand, 9922464 - 9922590
Alignment:
Q  235 tcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttccacgtgaccag 334  Q
    ||||||||| | || | |||||| || | |||||||| ||||||||||| |||| |||  |||||||||||||| ||||| |||||||| || |  |||     
T  9922464 tcaacccctaccactccaagccatgctcgcaccaatggccataaggcactaaaagttgcacaagacaaaaacaaatgattgacatcttctacattcccac 9922563  T
Q  335 aaccagtgacacacaaccacgcctcca 361  Q
    ||||||  ||||||| || ||||||||    
T  9922564 aaccagaaacacacatccgcgcctcca 9922590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 12257968 - 12257893
Alignment:
Q  7 ttatgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaaca 79  Q
    |||||||||||||||||| |||||   ||||||||||| ||||||||||   || ||||||||||||| |||||||    
T  12257968 ttatgagtaccaaaactagaaacaacgttactagctttcaaccaccacatgtaatatgattttactttatctaaca 12257893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 12265360 - 12265285
Alignment:
Q  7 ttatgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaaca 79  Q
    |||||||||||||||||| |||||   ||||||||||| ||||||||||   || ||||||||||||| |||||||    
T  12265360 ttatgagtaccaaaactagaaacaacgttactagctttcaaccaccacatgtaatatgattttactttatctaaca 12265285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 25090034 - 25090094
Alignment:
Q  28 acattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggta 88  Q
    |||||||||||||| | ||||||||| |||  |||||||||||| |||||||| |||||||    
T  25090034 acattactagctttcagccaccacaaggaatttgattttactttatctaacaactgtggta 25090094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 32266189 - 32266307
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgttt 105  Q
    ||||||||||||||||||   |||||| ||||  ||||||||||||| ||||| |||||| || || |||| || |||||| ||||  || ||  | |||    
T  32266189 atgagtaccaaaactaaatacaacatttctagtctttaaccaccacagagaagttgatttcacattatctagcatttgtggcaaagtactttgtctattt 32266288  T
Q  106 ctaaaaattctatcattcc 124  Q
    |||||||| ||||||||||    
T  32266289 ctaaaaatcctatcattcc 32266307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 32567779 - 32567662
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgttt 105  Q
    ||||||| ||||||||||   |||||| |||||||| |||||||||||||||| |||||| || || |||| || |||||| ||||  || ||  | |||    
T  32567779 atgagtatcaaaactaaatacaacattgctagcttt-aaccaccacaaagaagttgatttcacattatctagcatttgtggcaaagtactttgtctattt 32567681  T
Q  106 ctaaaaattctatcattcc 124  Q
    |||||||| ||||||||||    
T  32567680 ctaaaaatcctatcattcc 32567662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 7924011 - 7924088
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattg 83  Q
    |||||| |||||||||||   |||||||||||| |||||||||||||| |||| | |||| ||||| |||| ||||||    
T  7924011 atgagtgccaaaactaaatacaacattactagcctttaaccaccacaacgaagttaatttcactttatctagcaattg 7924088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 363
Target Start/End: Original strand, 13396269 - 13396379
Alignment:
Q  253 agccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaacc 352  Q
    ||||| |||| ||||| || |||||| |||| |||| ||   |||||||||||||| ||||| |||||||| ||||  ||| | ||||  ||||||||||    
T  13396269 agccatgcccgcaccattggccataatgcactaaaagttacacaagacaaaaacaaatgattaacatcttcaacgttcccacatccagaaacacacaacc 13396368  T
Q  353 acgcctccaaa 363  Q
     ||||||||||    
T  13396369 gcgcctccaaa 13396379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 323
Target Start/End: Original strand, 20824153 - 20824247
Alignment:
Q  229 tgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||| ||| |||||||| || | ||||||||||| |||||  | ||| || ||||||||| | || ||||||||||| || ||||||||||||||    
T  20824153 tgagaatcgaccccttcgacaccaagccaagcccgcaccagaggccacaaagcaccaaaagtcggacaagacaaaaataaatgattcacatcttc 20824247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 363
Target Start/End: Complemental strand, 41665628 - 41665518
Alignment:
Q  253 agccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaacc 352  Q
    ||||| |||| ||||| || |||||| |||| |||| ||   |||||||||||||| ||||| |||||||| ||||  ||| | ||||  ||||||||||    
T  41665628 agccatgcccgcaccattggccataatgcactaaaagttacacaagacaaaaacaaatgattaacatcttcaacgttcccacatccagaaacacacaacc 41665529  T
Q  353 acgcctccaaa 363  Q
     ||||||||||    
T  41665528 gcgcctccaaa 41665518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 25090133 - 25090198
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaag 183  Q
    ||||||||||  ||||||||||||| |||||||||||| ||||| | |||||  || |||||||||    
T  25090133 tcattccatataacccaaacacactgaagccaaatcaagtggaagagagatcgacgcgatttcaag 25090198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 363
Target Start/End: Original strand, 32266487 - 32266555
Alignment:
Q  295 caagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaaccacgcctccaaa 363  Q
    |||||||||||||| ||||| |||||||| ||||  ||| | ||||  |||||||||| ||||||||||    
T  32266487 caagacaaaaacaaatgattaacatcttcaacgttcccacatccagaaacacacaaccgcgcctccaaa 32266555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 1e-63; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 8 - 329
Target Start/End: Complemental strand, 11587714 - 11587381
Alignment:
Q  8 tatgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtt 104  Q
    ||||||||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| | | ||    
T  11587714 tatgagtaccaaagctaaaaacaacattactagcttttaaccaccacaaagaagatgattttactttgtctaacatttgtggtaaagaactctccttatt 11587615  T
Q  105 tctaaaaattctatcatt---------ccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaa 195  Q
    |||||||||| | |||||         ||||||||||  ||  | || ||||||||||||||| || |||||||| || ||| || ||| |||| | |||    
T  11587614 tctaaaaattttgtcattttgttcattccataagaccgcaattccctgaagccaaatcaaatgaaataaagatctacgggatgtcgagctacctgcataa 11587515  T
Q  196 tgaaaaagttgcaaaaaatggtccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggc 295  Q
    ||||  | |||||||||||||||||||||||| ||| | ||||| |||||||||   |||||  |||||||||||| ||| || ||||||||| ||||||    
T  11587514 tgaatgaattgcaaaaaatggtccgaaatatgctgacggtcaacaccttcaacctctagccactccctcaccaatggccacaaagcaccaaaatttgggc 11587415  T
Q  296 aagacaaaaacaagtgattcacatcttccacgtg 329  Q
    |||||||||||||||||||||||| ||| |||||    
T  11587414 aagacaaaaacaagtgattcacattttcaacgtg 11587381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 6 - 289
Target Start/End: Complemental strand, 23163149 - 23162855
Alignment:
Q  6 attatgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatg 102  Q
    ||||||||||||| | |||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| ||    
T  23163149 attatgagtaccatagctaaaaacaacattactagcttttaaccaccacaaagaagatgattttactttgtct-acatttgtgataaagagctctgcctg 23163051  T
Q  103 tttctaaaaattcta---------tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgt 193  Q
    |||||||||| ||||         ||||||||||| ||||||| ||||| |||||||||||||||||| || ||||  ||||||||||| | |||  | |    
T  23163050 tttctaaaaactctatcattccgctcattccataaaacccaaatacactgaagccaaatcaaatggaagaacgatcgacgtgatttcaaactaccagcat 23162951  T
Q  194 aatgaaaaagttgcaaaaaatggtccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaa 289  Q
      |||| || ||||||||| || ||||  |||   |||| |||||| ||||||| ||  |||||  |||||||||| |||||||||||||||||||    
T  23162950 gctgaataaattgcaaaaagtgatccgccatagactgagaatcaacgccttcaaaccccagccactccctcaccaaagaccataaggcaccaaaaa 23162855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 199
Target Start/End: Complemental strand, 17402180 - 17401999
Alignment:
Q  27 aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttctaaaaattcta--------- 117  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| |||||||  |||||||||||||| |   |||||||||| |  |||             
T  17402180 aacattactagcctttaactaccacaaagaagatgattttactttatctaacatatgtggtaaagagctttttctgtttctaaatagcctatcattccgt 17402081  T
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaa 199  Q
    |||||||| || || |||||||||  |||||||||||| ||||||| ||||| |||||||||  |||||| | |||||||||    
T  17402080 tcattccacaaaactcaaacacaccgaagccaaatcaagtggaaaagagatcgtcgtgatttagagcaacatgcgtaatgaa 17401999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 363
Target Start/End: Original strand, 7403794 - 7403904
Alignment:
Q  253 agccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaacc 352  Q
    ||||| |||| |||||||| ||||||||||| |||| |||| |||||||||||||| ||||| |||||||| ||||  ||  | |||| |||||||||||    
T  7403794 agccatgcccacaccaatggccataaggcactaaaagttggacaagacaaaaacaaatgattgacatcttcaacgttcccgcatccagagacacacaacc 7403893  T
Q  353 acgcctccaaa 363  Q
     ||||||||||    
T  7403894 gcgcctccaaa 7403904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 229 - 323
Target Start/End: Original strand, 12697670 - 12697764
Alignment:
Q  229 tgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||| ||| |||||||| || | ||||||||||| |||||| | |||||| |||||||||||||| ||||||||||| || ||||||||||||||    
T  12697670 tgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccataatgcaccaaaaattggacaagacaaaaataaatgattcacatcttc 12697764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 222
Target Start/End: Complemental strand, 2822431 - 2822327
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggt 217  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||| |||||||  || |||||||||| |||| | || |||| || ||||| |||||| |    
T  2822431 tcattccataaaacccaaacacactgaagccaaatcaagtggaagaaagatcgacgcgatttcaagccacctgcatattgaataaattgcataaaatgat 2822332  T
Q  218 ccgaa 222  Q
    |||||    
T  2822331 ccgaa 2822327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 323
Target Start/End: Complemental strand, 4548502 - 4548408
Alignment:
Q  229 tgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||| ||| |||||||| || | ||||||||||| |||||  | ||| || |||||||||||||||||||||||||| || ||||||||||||||    
T  4548502 tgagaatcgaccccttcgacaccaagccaagcccacaccagaggccacaatgcaccaaaaattgggcaagacaaaaataaatgattcacatcttc 4548408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 323
Target Start/End: Original strand, 8360957 - 8361051
Alignment:
Q  229 tgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||| ||| |||||||| || | ||||||||||| |||||| | ||| || |||||||||||||| ||||||||||| || ||||||||||||||    
T  8360957 tgagaatctaccccttcgacaccaagccaagcccgcaccaaaggccacaatgcaccaaaaattggacaagacaaaaataaatgattcacatcttc 8361051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 361
Target Start/End: Original strand, 20002471 - 20002707
Alignment:
Q  125 ataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggtccgaaat 224  Q
    |||| ||||||||||||| ||||||||||||||| || |||||||  ||  ||||||||| |||||| || | || || ||||| |||||| || || ||    
T  20002471 ataaaacccaaacacactgaagccaaatcaaatgaaataaagatcgacggaatttcaagccacctacatattcaataaattgcacaaaatgatctgagat 20002570  T
Q  225 atgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttcc 324  Q
    |   |||| ||| ||||||||  |   |||||| |||| |||||  | ||| || ||||| |||| ||| |||||||||||||  ||||||||||||||     
T  20002571 agcatgagaatctaccccttcggcatcaagccatgcccgcaccataggccacaatgcaccgaaaaatggacaagacaaaaacatatgattcacatcttca 20002670  T
Q  325 acgtgaccagaaccagtgacacacaaccacgcctcca 361  Q
    || || ||| | || |||||||| ||||  |||||||    
T  20002671 acatgcccacatcccgtgacacaaaaccgagcctcca 20002707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 19740558 - 19740437
Alignment:
Q  6 attatgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatg 102  Q
    |||||||||||||||| ||||||||   ||||||||||| | ||||||||| ||| ||||||||||||| |||||||  || | || |||||| ||  |     
T  19740558 attatgagtaccaaaagtaaaaacaacattactagctttcagccaccacaaggaatatgattttactttatctaacatatgcgatagagagctttgttta 19740459  T
Q  103 tttctaaaaattctatcattcc 124  Q
    ||||| |||| |||||||||||    
T  19740458 tttctgaaaactctatcattcc 19740437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 47686410 - 47686325
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaag 91  Q
    |||||| |||||||||||   |||||| ||||| ||||||||||||||||||| |||||| |||||||||| || |||||| ||||    
T  47686410 atgagtgccaaaactaaatacaacattgctagcctttaaccaccacaaagaagttgatttcactttgtctagcatttgtggcaaag 47686325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 363
Target Start/End: Original strand, 15740113 - 15740212
Alignment:
Q  264 caccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaaccacgcctccaaa 363  Q
    |||||||| |||||||||||||||| || | |||||||||||||| ||||| |||||||  || |  ||| | ||||  |||||||||| ||||||||||    
T  15740113 caccaatggccataaggcaccaaaagttagacaagacaaaaacaaatgattaacatctttaacattcccacacccagaaacacacaaccgcgcctccaaa 15740212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 46145297 - 46145418
Alignment:
Q  6 attatgagtaccaaaactaaaaac---attactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatg 102  Q
    ||||||| ||||||||||||||||   ||||||| |||| | ||| || || ||| ||||||||||||| |||||||| || ||||||||||| ||  |     
T  46145297 attatgaataccaaaactaaaaactacattactaactttcatccatcataaggaacatgattttactttatctaacaaatgcggtaaagagctgtgttta 46145396  T
Q  103 tttctaaaaattctatcattcc 124  Q
    ||||  |||| |||||||||||    
T  46145397 tttcagaaaactctatcattcc 46145418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 15739847 - 15739931
Alignment:
Q  10 tgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaag 91  Q
    |||||||||||||||||   |||||| ||||| |||| |||||||||||||| |||||| ||||| |||| || |||||| ||||    
T  15739847 tgagtaccaaaactaaatacaacattgctagcctttagccaccacaaagaagttgatttcactttatctagcatttgtggcaaag 15739931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 19754888 - 19754968
Alignment:
Q  9 atgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtgg 86  Q
    |||||||| ||||||||| |||   || ||||| ||||||||||||||||||| |||||| ||||| ||||||| ||||||    
T  19754888 atgagtacaaaaactaaatacagcattgctagcctttaaccaccacaaagaagttgatttcactttatctaacatttgtgg 19754968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 19784918 - 19784838
Alignment:
Q  9 atgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtgg 86  Q
    |||||||| ||||||||| |||   || ||||| ||||||||||||||||||| |||||| ||||| ||||||| ||||||    
T  19784918 atgagtacaaaaactaaatacagcattgctagcctttaaccaccacaaagaagttgatttcactttatctaacatttgtgg 19784838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 36223599 - 36223515
Alignment:
Q  14 taccaaaactaaaaac---attactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagct 95  Q
    ||||||||||||||||   |||||||||||| | | | ||||| ||| ||||||||||||| |||||||| |||||||| |||||    
T  36223599 taccaaaactaaaaactacattactagctttcagctatcacaaggaatatgattttactttatctaacaaatgtggtaaggagct 36223515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 2822553 - 2822470
Alignment:
Q  8 tatgagtaccaaaactaaaaa---cattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggta 88  Q
    |||||||||||||| |||| |   ||||||||||||| |||||||||| ||||  |||||| ||||| |||||||| |||||||    
T  2822553 tatgagtaccaaaagtaaagaacacattactagctttcaaccaccacagagaatttgatttcactttatctaacaactgtggta 2822470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 20788764 - 20788687
Alignment:
Q  36 agcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttctaaaaat 113  Q
    |||||||||||||||||||||||||||| | || || |||| || |||||| |||||||| ||  | |||||||||||    
T  20788764 agcttttaaccaccacaaagaagatgatataaccttatctagcatttgtggcaaagagctttgtctatttctaaaaat 20788687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 5148407 - 5148478
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacct 189  Q
    ||||||||||| ||| ||||||| | ||||||||||||||| || |||||||  || |||||||||| ||||    
T  5148407 tcattccataaaacctaaacacattgaagccaaatcaaatgaaataaagatcgacgggatttcaagccacct 5148478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 8890645 - 8890698
Alignment:
Q  6 attatgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaaga 56  Q
    ||||||||||||||||||||| |||   |||| |||||||||||||||||||||    
T  8890645 attatgagtaccaaaactaaatacagcattacaagcttttaaccaccacaaaga 8890698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 23643106 - 23643029
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattg 83  Q
    |||||| |||||||||||   |||||||||||| |||||||||||||| |||| | |||| ||||| |||| ||||||    
T  23643106 atgagtgccaaaactaaatacaacattactagcctttaaccaccacaacgaagttaatttcactttatctagcaattg 23643029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 13271385 - 13271327
Alignment:
Q  27 aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtg 85  Q
    |||||||||||| |||||||||||||| |||| | |||| ||||| |||| ||||||||    
T  13271385 aacattactagcctttaaccaccacaacgaagttaatttcactttatctagcaattgtg 13271327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 363
Target Start/End: Original strand, 19755145 - 19755255
Alignment:
Q  253 agccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaacc 352  Q
    ||||| |||| ||||| ||||||||| |||| |||| ||   |||||||||||||| ||||| |||||||| |||   ||| | ||||  ||||||||||    
T  19755145 agccatgcccgcaccattgaccataatgcactaaaagttacacaagacaaaaacaaatgattaacatcttcaacgctcccacatccagaaacacacaacc 19755244  T
Q  353 acgcctccaaa 363  Q
     ||||||||||    
T  19755245 gcgcctccaaa 19755255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 363
Target Start/End: Complemental strand, 19784661 - 19784551
Alignment:
Q  253 agccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaacc 352  Q
    ||||| |||| ||||| ||||||||| |||| |||| ||   |||||||||||||| ||||| |||||||| |||   ||| | ||||  ||||||||||    
T  19784661 agccatgcccgcaccattgaccataatgcactaaaagttacacaagacaaaaacaaatgattaacatcttcaacgctcccacatccagaaacacacaacc 19784562  T
Q  353 acgcctccaaa 363  Q
     ||||||||||    
T  19784561 gcgcctccaaa 19784551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 5148308 - 5148361
Alignment:
Q  28 acattactagcttttaaccaccacaaagaagatgattttactttgtctaacaat 81  Q
    |||||||||||||| ||||||||||| | |  |||||||||||| |||||||||    
T  5148308 acattactagctttcaaccaccacaaggtatgtgattttactttatctaacaat 5148361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 5790582 - 5790521
Alignment:
Q  27 aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggta 88  Q
    ||||||||||||||| ||||||||||| ||| | ||||| ||||  ||||||| ||||||||    
T  5790582 aacattactagctttcaaccaccacaacgaataggatttaacttgatctaacagttgtggta 5790521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 48242025 - 48242077
Alignment:
Q  27 aacattactagcttttaaccaccacaaagaagatgattttactttgtctaaca 79  Q
    |||||||||| |||| ||||| ||||| ||| ||||||||||||| |||||||    
T  48242025 aacattactaactttcaaccaacacaaggaatatgattttactttatctaaca 48242077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 29142446 - 29142599
Alignment:
Q  27 aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttctaaaaattct---------a 117  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||| || |||| |||||| |         |    
T  29142446 aacattattagcttttaaccaccacaaagatgatgattttactttgtctaacatttgtggtaaagaactctgcctgcttctgaaaattatatcattatga 29142545  T
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatctt 171  Q
    ||||||||||||||||||  ||||  ||| ||||||||||||||||||||||||    
T  29142546 tcattccataagacccaactacaccgaagacaaatcaaatggaaaaaagatctt 29142599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 352
Target Start/End: Complemental strand, 19255639 - 19255283
Alignment:
Q  8 tatgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtt 104  Q
    |||||||||||||||||||   |||||||  || ||||||||||||||||||||||||||| ||||| |||||||  ||||| |||||||| |   | ||    
T  19255639 tatgagtaccaaaactaaatacaacattatgaggttttaaccaccacaaagaagatgatttgactttatctaacatatgtggcaaagagctttttctatt 19255540  T
Q  105 tctaaaaattctatcattccat---------aagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaa 195  Q
    |||||||||  | ||||||| |         || ||| |||||||    | ||||||||| |||||||| |||| |||  || || | |||||| |||||    
T  19255539 tctaaaaatattgtcattccgttcattccacaacaccgaaacacaaagcaaccaaatcaagtggaaaaatgatcgtcgcaatctcgaacaacctgcgtaa 19255440  T
Q  196 tgaaaaagttgcaaaaaatggtccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggc 295  Q
    | || || |||||||||||| || ||| |   ||||| ||| |||||| | || |  ||||| |||| |||||||| |||||||||||||||| |||| |    
T  19255439 ttaataaattgcaaaaaatgatctgaagttgtttgagaatcgacccctaccactccgagccatgcccgcaccaatgtccataaggcaccaaaagttggac 19255340  T
Q  296 aagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaacc 352  Q
    ||||||| ||||| ||||| |||||||| ||||| ||  | ||||||||||||||||    
T  19255339 aagacaagaacaaatgattgacatcttcaacgtgcccgcatccagtgacacacaacc 19255283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 118 - 352
Target Start/End: Complemental strand, 18359484 - 18359251
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggt 217  Q
    ||||||||||| ||||||||||||| ||||||||||||||| || |||||||  || |||||||||| |||| |||| | || || ||||| |||||| |    
T  18359484 tcattccataaaacccaaacacactgaagccaaatcaaatgaaagaaagatcgacgagatttcaagccacctgcgtatttaataaattgcacaaaatgat 18359385  T
Q  218 ccgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcac 317  Q
    | || |||   |||| ||| | |||||| || | |||||| |||| | |||  | ||| || ||||| ||||| || |||||||||||||  ||||||||    
T  18359384 ctgagatagcatgagaatcta-cccttcgacaccaagccatgcccgccccataggccacaatgcaccgaaaatcggacaagacaaaaacatatgattcac 18359286  T
Q  318 atcttccacgtgaccagaaccagtgacacacaacc 352  Q
    |||||| || || ||||| || |||||||| ||||    
T  18359285 atcttcaacatgcccagatcccgtgacacaaaacc 18359251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 27117675 - 27117558
Alignment:
Q  10 tgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttc 106  Q
    ||||| |||||||||||   |||||||||||| ||||||||||||||||||| |||||| ||||| |||| ||||||||| ||||  |||||  | ||||    
T  27117675 tgagtgccaaaactaaatacaacattactagcctttaaccaccacaaagaagttgatttcactttatctagcaattgtggcaaagtactctgtctatttc 27117576  T
Q  107 taaaaattctatcattcc 124  Q
    ||||||  ||||||||||    
T  27117575 taaaaagcctatcattcc 27117558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 32228426 - 32228547
Alignment:
Q  6 attatgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatg 102  Q
    |||||||||||||||||||||||||   ||||||||||| |||||||||||| || ||||||||||||| |||||||  || |||| |||||| ||  |     
T  32228426 attatgagtaccaaaactaaaaacaacattactagctttcaaccaccacaaaaaatatgattttactttatctaacatatgcggtagagagctttgttta 32228525  T
Q  103 tttctaaaaattctatcattcc 124  Q
    ||||| |||| | |||||||||    
T  32228526 tttctgaaaactttatcattcc 32228547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 323
Target Start/End: Complemental strand, 33385750 - 33385563
Alignment:
Q  136 acacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggtccgaaatatgttgaggat 235  Q
    ||||||| || |||||||||||| || || ||||  || |||||||||| |||||| |||| || || ||||| |||||| || || |||   |||| ||    
T  33385750 acacactgaaaccaaatcaaatgaaataaggatcggcgcgatttcaagccacctacataatcaataaattgcacaaaatgatctgagatagcatgagaat 33385651  T
Q  236 caaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    | || | ||| || | ||||||||||| |||||| | ||| || |||||||||||||| ||||||||||| || ||||||||||||||    
T  33385650 ctactcattcgacaccaagccaagcccacaccaaaggccacaatgcaccaaaaattggacaagacaaaaataaatgattcacatcttc 33385563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 42927753 - 42927845
Alignment:
Q  6 attatgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagct 95  Q
    |||||||||| |||| |||||   |||||||| |||||||||||||||||||||||||||||| ||||| |||| || |||||| ||||||||    
T  42927753 attatgagtatcaaagctaaatacaacattacgagcttttaaccaccacaaagaagatgatttaactttatctagcatttgtggcaaagagct 42927845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 27166446 - 27166378
Alignment:
Q  27 aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagct 95  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| |||||||  ||||||| ||||||    
T  27166446 aacattactagctttcaaccaccacaaagaatatgattttactttatctaacatatgtggtatagagct 27166378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 31641383 - 31641500
Alignment:
Q  10 tgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttc 106  Q
    |||||||||||||||||   |||||||| ||| |||||||||||||| |||| |||||| ||||| |||| || |||||| ||||| || ||  | ||||    
T  31641383 tgagtaccaaaactaaatacaacattacaagcctttaaccaccacaacgaagttgatttcactttatctagcatttgtggcaaagaactttgtctatttc 31641482  T
Q  107 taaaaattctatcattcc 124  Q
    ||||||| ||||||||||    
T  31641483 taaaaatcctatcattcc 31641500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 33169288 - 33169372
Alignment:
Q  14 taccaaaactaaaaac---attactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagct 95  Q
    ||||||||||||||||   |||||||||||| | ||||||||| ||| ||||||||||||| |||||||| || |||||||||||    
T  33169288 taccaaaactaaaaactacattactagctttcatccaccacaaggaacatgattttactttatctaacaaatgcggtaaagagct 33169372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 12824824 - 12824906
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggta 88  Q
    |||||| |||||||||||   |||||||||||| |||||||||||||| |||| |||||| ||||| |||| |||||||||||    
T  12824824 atgagtgccaaaactaaatacaacattactagcctttaaccaccacaacgaagttgatttcactttatctagcaattgtggta 12824906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 35984305 - 35984219
Alignment:
Q  9 atgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaaga 92  Q
    ||||||||||||||||||||||   |||| ||| ||||||||||||||||||| |||||| ||||| |||| || |||||| |||||    
T  35984305 atgagtaccaaaactaaaaacaacattacaagcctttaaccaccacaaagaagttgatttcactttatctagcatttgtggcaaaga 35984219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 25824636 - 25824753
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgttt 105  Q
    ||||||||||||||||||   |||||||| ||| ||||||||||||||||||| |||||| ||||| |||| || ||| || ||||| |  ||  | |||    
T  25824636 atgagtaccaaaactaaatacaacattacaagcctttaaccaccacaaagaagttgatttcactttatctagcatttgaggcaaagaacattgtctattt 25824735  T
Q  106 ctaaaaattctatcattc 123  Q
    |||||||| |||||||||    
T  25824736 ctaaaaatcctatcattc 25824753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 28536190 - 28536074
Alignment:
Q  9 atgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgttt 105  Q
    ||||||||||||||||||||||   |||| ||| ||||||||||||||||| | |||||| ||||| |||| || |||||| ||||| ||  |  | |||    
T  28536190 atgagtaccaaaactaaaaacaacattacaagcctttaaccaccacaaagacgttgatttcactttatctagcatttgtggcaaagaacttcgtctattt 28536091  T
Q  106 ctaaaaattctatcatt 122  Q
    |||||||| ||||||||    
T  28536090 ctaaaaatcctatcatt 28536074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 18359583 - 18359519
Alignment:
Q  28 acattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaaga 92  Q
    |||||||||||||| ||||||||||||| |  |||||||||||| ||||||||| |||||| |||    
T  18359583 acattactagctttcaaccaccacaaagtatgtgattttactttatctaacaatagtggtataga 18359519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 23238008 - 23238126
Alignment:
Q  9 atgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgttt 105  Q
    ||||||||||||||||||||||   || ||||| ||||||||||||||||||| |||||| || || |||| ||  ||||| ||||  || ||  | |||    
T  23238008 atgagtaccaaaactaaaaacaacattgctagcctttaaccaccacaaagaagttgatttcacattatctagcatctgtggcaaagtactttgtctattt 23238107  T
Q  106 ctaaaaattctatcattcc 124  Q
    |||||||| ||||||||||    
T  23238108 ctaaaaatcctatcattcc 23238126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 12820464 - 12820384
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtgg 86  Q
    |||||| |||||||||||   |||||||| ||| |||||||||||||| |||| |||||| ||||| |||| |||||||||    
T  12820464 atgagtgccaaaactaaatacaacattaccagcctttaaccaccacaacgaagttgatttcactttatctagcaattgtgg 12820384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 26072515 - 26072591
Alignment:
Q  6 attatgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaaca 79  Q
    |||||||||| | ||||||||   ||||||||||||||| ||||||||||| ||| | ||||||||||| |||||||    
T  26072515 attatgagtatcgaaactaaagacaacattactagctttcaaccaccacaaggaataagattttactttatctaaca 26072591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 30732829 - 30732749
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtgg 86  Q
    |||||| |||||||||||   |||||||||||  |||||||||||||| |||| |||||| ||||| |||| |||||||||    
T  30732829 atgagtgccaaaactaaatacaacattactagtctttaaccaccacaacgaagttgatttcactttatctagcaattgtgg 30732749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 323
Target Start/End: Complemental strand, 8300547 - 8300371
Alignment:
Q  147 ccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggtccgaaatatgttgaggatcaaccccttca 246  Q
    |||||||||||| || || ||||  ||||||||||||| |||| | || | || || ||||| ||| || || || |||   |||| ||| ||||||||     
T  8300547 ccaaatcaaatgaaataatgatcgacgtgatttcaagccacctgcatattcaataaattgcacaaagtgatctgagatagtatgagaatcgaccccttcg 8300448  T
Q  247 acccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    || | ||||||||||| || ||  | ||| |||||||||||| | || ||||||||||| || ||||||||||||||    
T  8300447 acaccaagccaagcccgcatcagaggccacaaggcaccaaaagtcggacaagacaaaaataaatgattcacatcttc 8300371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 18148228 - 18148180
Alignment:
Q  31 ttactagcttttaaccaccacaaagaagatgattttactttgtctaaca 79  Q
    ||||||||||| ||||||||||||||  ||||||||||||| |||||||    
T  18148228 ttactagctttcaaccaccacaaagagtatgattttactttatctaaca 18148180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 323
Target Start/End: Original strand, 10776672 - 10776715
Alignment:
Q  280 gcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||||||||||||| ||||||||||| || ||||||||||||||    
T  10776672 gcaccaaaaattggacaagacaaaaataaatgattcacatcttc 10776715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 323
Target Start/End: Original strand, 27766950 - 27766993
Alignment:
Q  280 gcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||||||||||||| ||||||||||| || ||||||||||||||    
T  27766950 gcaccaaaaattggacaagacaaaaataaatgattcacatcttc 27766993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 42513345 - 42513422
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattg 83  Q
    |||||| |||||||||||   |||||||||||| |||||||||||||| |||| | |||| ||||| |||| ||||||    
T  42513345 atgagtgccaaaactaaatacaacattactagcctttaaccaccacaacgaagttaatttcactttatctagcaattg 42513422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 8941926 - 8941834
Alignment:
Q  6 attatgagtaccaaaactaaaaac---attactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagct 95  Q
    ||||||| ||||||||||||||||   |||||||||||| | ||||||||| | | ||||||||| ||| | ||| || || |||||||||||    
T  8941926 attatgaataccaaaactaaaaactacattactagctttcagccaccacaaggtacatgattttaatttatgtaataaatgcggtaaagagct 8941834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 8227651 - 8227710
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattt 65  Q
    ||||||||||||||||||   |||||| ||||| ||||||||||||||||| | ||||||    
T  8227651 atgagtaccaaaactaaatacaacattgctagcctttaaccaccacaaagaggttgattt 8227710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 18090256 - 18090188
Alignment:
Q  27 aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagct 95  Q
    |||||||| ||| || ||||||||||| ||| | ||||||||||| |||||||  || |||||||||||    
T  18090256 aacattaccagccttcaaccaccacaatgaataggattttactttatctaacatatgcggtaaagagct 18090188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 20209113 - 20209077
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatca 154  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  20209113 tcattccataaaacccaaacacacaaaagccaaatca 20209077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 363
Target Start/End: Original strand, 23238307 - 23238375
Alignment:
Q  295 caagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaaccacgcctccaaa 363  Q
    |||||||||||||| ||||| |||||||| ||||  ||| | ||||  |||||||||| ||||||||||    
T  23238307 caagacaaaaacaaatgattaacatcttcaacgttcccacatccagaaacacacaaccgcgcctccaaa 23238375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 323
Target Start/End: Complemental strand, 28535952 - 28535864
Alignment:
Q  235 tcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    ||||||||| | || | |||||| |||| ||||| || ||||||||||| |||| |||  |||||||||||||| ||||  ||||||||    
T  28535952 tcaacccctaccactccaagccatgcccgcaccattggccataaggcactaaaagttgcacaagacaaaaacaaatgatcgacatcttc 28535864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 363
Target Start/End: Complemental strand, 35984044 - 35983940
Alignment:
Q  259 gccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaaccacgcct 358  Q
    |||| ||||| || ||||||||||| |||| |||  |||||||||||||| ||||| ||| |||| || |  ||| |||||   |||||||||| |||||    
T  35984044 gcccgcaccattggccataaggcactaaaagttgcacaagacaaaaacaaatgattgacaacttctacattcccacaaccaaaaacacacaaccgcgcct 35983945  T
Q  359 ccaaa 363  Q
    |||||    
T  35983944 ccaaa 35983940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 47876608 - 47876726
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgttt 105  Q
    ||||||||||||||||||   |||||||||||| ||||||||||||||||||| |||||| ||||| |||| || |||||| ||||| || ||  | |||    
T  47876608 atgagtaccaaaactaaatacaacattactagcctttaaccaccacaaagaagttgatttcactttttctagcatttgtggcaaagaactttgtctattt 47876707  T
Q  106 ctaaaaattctatcattcc 124  Q
    |||||||| ||||||||||    
T  47876708 ctaaaaatcctatcattcc 47876726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 235953 - 235838
Alignment:
Q  10 tgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttc 106  Q
    |||||||||||||||||   |||||||| ||| ||||||||||||||||||| |||||| ||||| |||| || |||||| |||||||| ||  | ||||    
T  235953 tgagtaccaaaactaaatacaacattacaagcctttaaccaccacaaagaagttgatttcactttatctagcatttgtggcaaagagctttgtctatttc 235854  T
Q  107 taaaaattctatcatt 122  Q
    |||||||  |||||||    
T  235853 taaaaatcatatcatt 235838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 138
Target Start/End: Original strand, 17720270 - 17720401
Alignment:
Q  10 tgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttc 106  Q
    |||||||||||||||||||||   |||| ||| ||||||||||||||||||| |||||| ||||| |||| || |||||| ||||| || ||  | ||||    
T  17720270 tgagtaccaaaactaaaaacaacattacaagcctttaaccaccacaaagaagttgatttcactttatctagcatttgtggcaaagaactttgtctatttc 17720369  T
Q  107 taaaaattctatcattccataagacccaaaca 138  Q
    ||||||  ||||||||||| || ||| |||||    
T  17720370 taaaaagcctatcattccacaacaccgaaaca 17720401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 34359488 - 34359423
Alignment:
Q  30 attactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagct 95  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||||  ||||||||||||||    
T  34359488 attattagcttttaaccaccaccaagaagatgaatttactttgtctaacatatgtggtaaagagct 34359423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 121 - 316
Target Start/End: Original strand, 18530259 - 18530454
Alignment:
Q  121 ttccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggtccg 220  Q
    |||||||| ||  ||||||||| ||| ||||||||||| || || ||||  || |||||||||| |||| | || | || || ||||| |||||| || |    
T  18530259 ttccataaaactgaaacacactgaagtcaaatcaaatgaaataaggatcaacgcgatttcaagccacctgcatattcaataaattgcacaaaatgatctg 18530358  T
Q  221 aaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattca 316  Q
    | |||   |||| ||| |||||||| || | ||||||||||| |||||  | ||| || |||||||||||||| |||||||||||||| |||||||    
T  18530359 atatagcatgagaatctaccccttcgacaccaagccaagcccgcaccataggccacaatgcaccaaaaattggacaagacaaaaacaaatgattca 18530454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 323
Target Start/End: Original strand, 37254405 - 37254709
Alignment:
Q  28 acattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagctctgcatgtttctaaa--------aattcta-t 118  Q
    |||||||||||||| ||||||||||| | |  |||||||||||| |||||||||||||||| ||| || ||   ||| | |||         |||| | |    
T  37254405 acattactagctttcaaccaccacaaggtatgtgattttactttatctaacaattgtggtatagaactttgacagttccgaaataacctgccattccatt 37254504  T
Q  119 cattccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggtc 218  Q
    |||||||||| ||||||||||||| ||||||||| ||||| || |||||||  || |||| ||||| |||| | || | || || ||||| |||||| ||    
T  37254505 cattccataaaacccaaacacactgaagccaaataaaatgaaataaagatcgacgggattccaagccacctgcatattcaataaattgcacaaaatgatc 37254604  T
Q  219 cgaaatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcaca 318  Q
     || |||   |||| ||  |||||||| || | |||||| |||| |||||  | ||| || ||||| |||||||| |||||||||||||  |||||||||    
T  37254605 tgagatagcatgagaatttaccccttcgacaccaagccatgcccgcaccataggccacaatgcaccgaaaattggacaagacaaaaacatatgattcaca 37254704  T
Q  319 tcttc 323  Q
    |||||    
T  37254705 tcttc 37254709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 37919169 - 37919249
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtgg 86  Q
    ||||||||||||||||||   |||||| ||||| ||||||||||||||||||| |||||| ||||| ||||||| ||||||    
T  37919169 atgagtaccaaaactaaatacaacattgctagcctttaaccaccacaaagaagttgatttcactttatctaacatttgtgg 37919249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 122 - 323
Target Start/End: Original strand, 25619209 - 25619410
Alignment:
Q  122 tccataagacccaaacacactaaagccaaatcaaatggaaaaaagatcttcgtgatttcaagcaacctacgtaatgaaaaagttgcaaaaaatggtccga 221  Q
    ||||||| ||||||||||||| ||||||||||||||| || |||||||  || |||||||||| |||| | || |  | || ||||| |||||| || ||    
T  25619209 tccataaaacccaaacacactgaagccaaatcaaatgaaataaagatcgacgggatttcaagccacctgcatattcgataaattgcacaaaatgatctga 25619308  T
Q  222 aatatgttgaggatcaaccccttcaacccaaagccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatct 321  Q
     |||   |||| ||| || |||||||| | ||||||  ||| ||||   | ||| || ||||| |||||||| |||||||||||||  ||||||||||||    
T  25619309 gatagcatgagaatctacaccttcaacaccaagccattcccgcaccttaggccacaatgcaccgaaaattggacaagacaaaaacatatgattcacatct 25619408  T
Q  322 tc 323  Q
    ||    
T  25619409 tc 25619410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 38890214 - 38890150
Alignment:
Q  27 aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaag 91  Q
    |||||||||| | ||||||||||||||||||| |||||| ||||| |||| ||||||||| ||||    
T  38890214 aacattactaacctttaaccaccacaaagaagttgatttcactttatctagcaattgtggcaaag 38890150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 363
Target Start/End: Complemental strand, 235698 - 235588
Alignment:
Q  253 agccaagccctcaccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaacc 352  Q
    ||||| |||| ||||| || ||||||||||| |||| |||  |||||||||||||| ||||| |||||||| ||||   |  ||||||  ||||||||||    
T  235698 agccatgcccgcaccattggccataaggcactaaaagttgaacaagacaaaaacaaatgattaacatcttcaacgttctcgcaaccagaaacacacaacc 235599  T
Q  353 acgcctccaaa 363  Q
     ||||||||||    
T  235598 gcgcctccaaa 235588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 29967600 - 29967680
Alignment:
Q  9 atgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtgg 86  Q
    ||||||||||||||||||||||   |||||||| ||||||||||||||||| | |||||| || || |||| || ||||||    
T  29967600 atgagtaccaaaactaaaaacaacattactagcctttaaccaccacaaagaggttgatttcacattatctagcatttgtgg 29967680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 48394526 - 48394602
Alignment:
Q  6 attatgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaaca 79  Q
    |||||||||||| ||| ||||   ||||||||||||||| ||||||||||| ||| ||||||||| ||| |||||||    
T  48394526 attatgagtaccgaaattaaagacaacattactagctttcaaccaccacaaggaatatgattttattttatctaaca 48394602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 323
Target Start/End: Original strand, 17720527 - 17720586
Alignment:
Q  264 caccaatgaccataaggcaccaaaaattgggcaagacaaaaacaagtgattcacatcttc 323  Q
    |||||||| ||||||||||| |||| |||  |||||||||||||| ||||| ||||||||    
T  17720527 caccaatggccataaggcactaaaagttgcacaagacaaaaacaaatgattaacatcttc 17720586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 11277768 - 11277716
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaag 58  Q
    ||||||||||||||||||   |||||| ||||| |||||||||||||||||||    
T  11277768 atgagtaccaaaactaaatacaacattgctagcctttaaccaccacaaagaag 11277716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 25619106 - 25619166
Alignment:
Q  28 acattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggta 88  Q
    |||||||||||||| |||||||| || | |  |||||||||||| ||||||||| ||||||    
T  25619106 acattactagctttcaaccaccataaggtatgtgattttactttatctaacaatagtggta 25619166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 363
Target Start/End: Original strand, 29967898 - 29967966
Alignment:
Q  295 caagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaaccacgcctccaaa 363  Q
    |||||||||||||| ||||| |||||||| ||||  ||| | ||||  |||||||||| ||||||||||    
T  29967898 caagacaaaaacaaatgattaacatcttcaacgttcccacatccagaaacacacaaccgcgcctccaaa 29967966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 6523 - 6435
Alignment:
Q  10 tgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaagagct 95  Q
    |||||||||||||||||   ||||||||||||||| ||||||||||| ||| | ||||||||||| |||||||  || |||||||||||    
T  6523 tgagtaccaaaactaaatacaacattactagctttcaaccaccacaatgaataagattttactttatctaacatatgcggtaaagagct 6435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 11699 - 11635
Alignment:
Q  27 aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtggtaaag 91  Q
    |||||||||||| ||||||||||||||||||| |||||| ||||| ||||  |||||||| ||||    
T  11699 aacattactagcctttaaccaccacaaagaagttgatttcactttatctagaaattgtggcaaag 11635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 5927 - 5847
Alignment:
Q  9 atgagtaccaaaactaaaaaca---ttactagcttttaaccaccacaaagaagatgattttactttgtctaacaattgtgg 86  Q
    |||||||||||||||||| |||   || ||||| ||||||||||||||||||| |||||| ||||| |||| || ||||||    
T  5927 atgagtaccaaaactaaatacagcattgctagcctttaaccaccacaaagaagttgatttcactttatctagcatttgtgg 5847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 106358 - 106281
Alignment:
Q  9 atgagtaccaaaactaaa---aacattactagcttttaaccaccacaaagaagatgattttactttgtctaacaattg 83  Q
    |||||| |||||||||||   |||||||||||| |||||||||||||| |||| | |||| ||||| |||| ||||||    
T  106358 atgagtgccaaaactaaatacaacattactagcctttaaccaccacaacgaagttaatttcactttatctagcaattg 106281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 363
Target Start/End: Original strand, 3175 - 3243
Alignment:
Q  295 caagacaaaaacaagtgattcacatcttccacgtgaccagaaccagtgacacacaaccacgcctccaaa 363  Q
    |||||||||||||| ||||| |||||||| ||||  ||| | ||||  |||||||||| ||||||||||    
T  3175 caagacaaaaacaaatgattaacatcttcaacgttcccacatccagaaacacacaaccgcgcctccaaa 3243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 7274 - 7310
Alignment:
Q  118 tcattccataagacccaaacacactaaagccaaatca 154  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  7274 tcattccataaaacccaaacacacaaaagccaaatca 7310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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