View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2755_low_35 (Length: 294)

Name: NF2755_low_35
Description: NF2755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2755_low_35
NF2755_low_35
[»] chr8 (40 HSPs)
chr8 (18-294)||(7118373-7118653)
chr8 (93-201)||(20852920-20853028)
chr8 (144-200)||(43186298-43186354)
chr8 (152-201)||(14531622-14531671)
chr8 (144-201)||(23952495-23952552)
chr8 (85-206)||(30578250-30578371)
chr8 (85-201)||(6004945-6005061)
chr8 (85-201)||(9985632-9985748)
chr8 (85-201)||(27300347-27300463)
chr8 (144-199)||(14228710-14228765)
chr8 (85-204)||(20995012-20995131)
chr8 (144-201)||(5924811-5924868)
chr8 (144-201)||(10344325-10344382)
chr8 (146-199)||(12697728-12697781)
chr8 (144-201)||(40380282-40380339)
chr8 (85-201)||(1646257-1646373)
chr8 (85-201)||(12045607-12045723)
chr8 (85-201)||(28713094-28713210)
chr8 (85-201)||(28720441-28720557)
chr8 (85-201)||(28728083-28728199)
chr8 (85-201)||(42716321-42716437)
chr8 (85-172)||(6243064-6243151)
chr8 (144-199)||(41675382-41675437)
chr8 (146-203)||(10128640-10128698)
chr8 (85-199)||(31665944-31666058)
chr8 (176-206)||(36023642-36023672)
chr8 (144-201)||(41519870-41519928)
chr8 (172-201)||(42130-42159)
chr8 (144-201)||(9314412-9314469)
chr8 (85-201)||(14548779-14548893)
chr8 (85-170)||(25430678-25430763)
chr8 (164-201)||(29913565-29913602)
chr8 (144-201)||(30927944-30928001)
chr8 (85-198)||(32234406-32234519)
chr8 (144-201)||(33817157-33817214)
chr8 (144-201)||(41406869-41406926)
chr8 (85-201)||(23708977-23709093)
chr8 (85-201)||(31806300-31806416)
chr8 (161-201)||(33115906-33115946)
chr8 (85-201)||(44380568-44380684)
[»] chr4 (43 HSPs)
chr4 (85-201)||(6686047-6686163)
chr4 (85-201)||(29577390-29577506)
chr4 (85-201)||(44272766-44272880)
chr4 (85-201)||(6126854-6126970)
chr4 (144-201)||(47105912-47105969)
chr4 (85-201)||(32901330-32901446)
chr4 (145-201)||(54801501-54801557)
chr4 (143-201)||(3475870-3475928)
chr4 (85-199)||(34114071-34114185)
chr4 (143-201)||(53662440-53662498)
chr4 (144-201)||(24235321-24235378)
chr4 (143-202)||(336819-336878)
chr4 (158-202)||(2615155-2615199)
chr4 (85-201)||(10096696-10096812)
chr4 (85-201)||(12074105-12074221)
chr4 (85-201)||(17363231-17363347)
chr4 (85-201)||(23094377-23094493)
chr4 (85-201)||(36110135-36110251)
chr4 (85-201)||(39880984-39881100)
chr4 (85-169)||(46791945-46792029)
chr4 (143-199)||(52487281-52487337)
chr4 (144-199)||(19879776-19879831)
chr4 (144-210)||(9472526-9472592)
chr4 (144-201)||(39158106-39158164)
chr4 (144-210)||(45779304-45779370)
chr4 (143-201)||(51107453-51107511)
chr4 (144-201)||(3222990-3223047)
chr4 (144-201)||(9032781-9032838)
chr4 (150-199)||(12074475-12074524)
chr4 (144-201)||(20056397-20056454)
chr4 (152-201)||(30866354-30866403)
chr4 (144-201)||(36444408-36444465)
chr4 (144-201)||(40258206-40258263)
chr4 (144-201)||(40721977-40722034)
chr4 (152-201)||(46480525-46480574)
chr4 (144-201)||(52669622-52669679)
chr4 (85-201)||(24772672-24772788)
chr4 (165-201)||(32464638-32464674)
chr4 (85-137)||(33438110-33438162)
chr4 (146-198)||(33484123-33484175)
chr4 (145-201)||(40335790-40335846)
chr4 (85-201)||(43864035-43864150)
chr4 (125-201)||(44495988-44496064)
[»] chr2 (49 HSPs)
chr2 (92-199)||(45693429-45693536)
chr2 (85-170)||(11828774-11828859)
chr2 (85-201)||(11152653-11152769)
chr2 (85-201)||(12256902-12257018)
chr2 (142-199)||(8805233-8805290)
chr2 (85-198)||(43621902-43622015)
chr2 (85-201)||(18508079-18508195)
chr2 (144-201)||(9384376-9384433)
chr2 (125-201)||(12784392-12784469)
chr2 (144-201)||(14957589-14957646)
chr2 (144-201)||(29871365-29871422)
chr2 (144-201)||(38021357-38021414)
chr2 (144-201)||(41353510-41353567)
chr2 (144-200)||(5962640-5962696)
chr2 (85-201)||(32688498-32688614)
chr2 (85-201)||(33857218-33857334)
chr2 (89-201)||(35792414-35792526)
chr2 (85-201)||(36383463-36383579)
chr2 (85-201)||(44484610-44484726)
chr2 (150-201)||(5095972-5096023)
chr2 (144-203)||(34373004-34373063)
chr2 (164-198)||(3924158-3924192)
chr2 (143-201)||(6328668-6328726)
chr2 (172-202)||(8087371-8087401)
chr2 (143-197)||(19520081-19520135)
chr2 (85-167)||(38027569-38027651)
chr2 (143-201)||(40371120-40371178)
chr2 (144-201)||(3196100-3196157)
chr2 (144-201)||(6884911-6884968)
chr2 (125-206)||(8555285-8555365)
chr2 (88-201)||(9695018-9695131)
chr2 (144-201)||(10288151-10288208)
chr2 (144-201)||(13850197-13850254)
chr2 (144-201)||(23048096-23048153)
chr2 (144-201)||(27307244-27307301)
chr2 (152-201)||(29893611-29893660)
chr2 (144-201)||(34144564-34144621)
chr2 (144-201)||(35171239-35171296)
chr2 (144-201)||(38246764-38246821)
chr2 (85-170)||(38598303-38598388)
chr2 (162-199)||(43691018-43691055)
chr2 (85-201)||(6365187-6365303)
chr2 (85-197)||(6742364-6742476)
chr2 (85-201)||(8352836-8352952)
chr2 (85-201)||(9449369-9449485)
chr2 (85-201)||(23344943-23345059)
chr2 (85-201)||(31635764-31635880)
chr2 (85-201)||(35705871-35705986)
chr2 (85-201)||(39744548-39744664)
[»] chr7 (32 HSPs)
chr7 (85-199)||(49014353-49014467)
chr7 (85-201)||(17039158-17039274)
chr7 (85-201)||(43079586-43079702)
chr7 (143-206)||(35212967-35213030)
chr7 (144-199)||(35857500-35857555)
chr7 (144-206)||(29763826-29763888)
chr7 (144-198)||(43255580-43255634)
chr7 (144-210)||(44175537-44175603)
chr7 (85-170)||(24380675-24380760)
chr7 (85-201)||(27070623-27070738)
chr7 (85-201)||(27207575-27207690)
chr7 (85-201)||(40693482-40693598)
chr7 (85-201)||(44187692-44187808)
chr7 (104-201)||(4971291-4971388)
chr7 (144-201)||(10014968-10015025)
chr7 (152-201)||(37355133-37355182)
chr7 (85-197)||(18157139-18157251)
chr7 (85-161)||(27688678-27688754)
chr7 (148-199)||(2741906-2741957)
chr7 (144-199)||(37385246-37385301)
chr7 (85-199)||(640395-640509)
chr7 (85-198)||(5724042-5724155)
chr7 (144-201)||(28081795-28081852)
chr7 (85-118)||(30769613-30769646)
chr7 (144-201)||(33050184-33050241)
chr7 (92-201)||(42467205-42467314)
chr7 (172-201)||(49025344-49025373)
chr7 (164-201)||(49167888-49167925)
chr7 (144-199)||(2300082-2300138)
chr7 (85-201)||(17500698-17500814)
chr7 (85-201)||(17552400-17552516)
chr7 (144-200)||(21153052-21153108)
[»] chr3 (48 HSPs)
chr3 (85-201)||(1295333-1295449)
chr3 (85-201)||(20549339-20549455)
chr3 (85-201)||(41717264-41717380)
chr3 (85-201)||(37585431-37585548)
chr3 (85-201)||(7168-7284)
chr3 (85-201)||(36869791-36869907)
chr3 (143-201)||(20096432-20096490)
chr3 (85-169)||(1834539-1834623)
chr3 (85-201)||(1901880-1901996)
chr3 (85-201)||(1911326-1911442)
chr3 (149-201)||(4189738-4189790)
chr3 (85-201)||(8868873-8868989)
chr3 (85-201)||(28300287-28300403)
chr3 (85-201)||(35376505-35376621)
chr3 (145-201)||(37754448-37754504)
chr3 (85-161)||(40785653-40785729)
chr3 (127-206)||(37134602-37134681)
chr3 (85-172)||(50745579-50745666)
chr3 (85-167)||(16295499-16295581)
chr3 (163-201)||(21239110-21239148)
chr3 (144-201)||(28920062-28920120)
chr3 (143-201)||(38693579-38693637)
chr3 (144-201)||(39901592-39901650)
chr3 (143-201)||(40419654-40419712)
chr3 (144-201)||(48789328-48789386)
chr3 (139-201)||(52454102-52454164)
chr3 (85-201)||(53133902-53134022)
chr3 (144-201)||(11327109-11327166)
chr3 (144-201)||(13159662-13159719)
chr3 (144-201)||(16267910-16267967)
chr3 (85-198)||(25959496-25959609)
chr3 (144-201)||(31206864-31206921)
chr3 (144-201)||(34021476-34021533)
chr3 (144-201)||(44027143-44027199)
chr3 (144-201)||(47141613-47141670)
chr3 (144-201)||(48205046-48205103)
chr3 (152-201)||(52100262-52100311)
chr3 (152-201)||(52727469-52727518)
chr3 (125-201)||(7867705-7867781)
chr3 (127-199)||(16139291-16139363)
chr3 (85-169)||(35368644-35368728)
chr3 (85-197)||(37710409-37710521)
chr3 (146-201)||(38363235-38363291)
chr3 (85-201)||(45517611-45517727)
chr3 (154-201)||(48789613-48789661)
chr3 (89-201)||(49130855-49130967)
chr3 (85-201)||(51672864-51672980)
chr3 (145-201)||(53473611-53473667)
[»] chr1 (47 HSPs)
chr1 (85-201)||(27352631-27352747)
chr1 (85-201)||(34941874-34941990)
chr1 (125-199)||(44723363-44723438)
chr1 (85-170)||(50460666-50460751)
chr1 (89-201)||(586900-587012)
chr1 (85-201)||(14002696-14002811)
chr1 (85-201)||(41885722-41885838)
chr1 (85-201)||(51168722-51168838)
chr1 (150-201)||(34157807-34157858)
chr1 (85-206)||(3919296-3919415)
chr1 (85-199)||(48576459-48576573)
chr1 (125-198)||(5043096-5043169)
chr1 (144-201)||(7371961-7372018)
chr1 (85-202)||(11068425-11068542)
chr1 (144-201)||(26585186-26585243)
chr1 (144-201)||(30547356-30547413)
chr1 (144-201)||(36669383-36669440)
chr1 (148-201)||(49699769-49699822)
chr1 (85-201)||(8577456-8577572)
chr1 (85-201)||(23554752-23554868)
chr1 (148-199)||(31974723-31974775)
chr1 (85-201)||(40238439-40238555)
chr1 (85-201)||(43105106-43105222)
chr1 (150-201)||(45863739-45863791)
chr1 (144-199)||(835874-835929)
chr1 (85-204)||(12489535-12489654)
chr1 (85-167)||(578839-578921)
chr1 (144-201)||(1689392-1689450)
chr1 (157-199)||(25994942-25994984)
chr1 (144-206)||(25995456-25995518)
chr1 (163-201)||(26101395-26101433)
chr1 (143-201)||(26547235-26547293)
chr1 (144-201)||(46281437-46281495)
chr1 (144-201)||(18610774-18610831)
chr1 (144-201)||(22674713-22674770)
chr1 (152-201)||(26839383-26839432)
chr1 (144-201)||(29489372-29489429)
chr1 (85-170)||(30414896-30414981)
chr1 (144-201)||(35846890-35846947)
chr1 (144-201)||(40118728-40118785)
chr1 (164-201)||(45350128-45350165)
chr1 (85-198)||(48325226-48325339)
chr1 (85-201)||(30530528-30530644)
chr1 (85-137)||(32939240-32939292)
chr1 (85-161)||(40596008-40596084)
chr1 (85-201)||(40610230-40610346)
chr1 (85-201)||(44112455-44112571)
[»] chr5 (37 HSPs)
chr5 (85-201)||(29803226-29803340)
chr5 (154-201)||(27005502-27005549)
chr5 (144-198)||(3154656-3154710)
chr5 (85-201)||(25345341-25345455)
chr5 (85-201)||(27340870-27340986)
chr5 (85-201)||(31626030-31626146)
chr5 (85-167)||(91250-91332)
chr5 (143-201)||(6538871-6538929)
chr5 (147-201)||(11415909-11415963)
chr5 (85-199)||(17489351-17489465)
chr5 (144-201)||(19983842-19983898)
chr5 (125-201)||(26686882-26686959)
chr5 (125-201)||(26956613-26956690)
chr5 (144-201)||(35814454-35814511)
chr5 (148-201)||(38075703-38075756)
chr5 (85-201)||(2456027-2456143)
chr5 (85-201)||(11880941-11881057)
chr5 (85-201)||(19437258-19437374)
chr5 (85-201)||(34400619-34400734)
chr5 (144-210)||(6940162-6940229)
chr5 (143-202)||(30103463-30103522)
chr5 (85-191)||(28501628-28501734)
chr5 (144-201)||(4954467-4954524)
chr5 (85-206)||(6529015-6529136)
chr5 (144-201)||(7144578-7144635)
chr5 (144-201)||(20985542-20985599)
chr5 (144-201)||(30420627-30420684)
chr5 (152-201)||(35464604-35464653)
chr5 (144-201)||(38010873-38010930)
chr5 (85-201)||(3723030-3723146)
chr5 (85-201)||(5698282-5698398)
chr5 (85-169)||(8442192-8442276)
chr5 (85-161)||(25255293-25255369)
chr5 (85-161)||(25319083-25319159)
chr5 (85-161)||(40566171-40566247)
chr5 (85-201)||(41460117-41460233)
chr5 (85-169)||(43153014-43153098)
[»] chr6 (19 HSPs)
chr6 (85-201)||(16743220-16743336)
chr6 (85-201)||(32729890-32730006)
chr6 (85-201)||(16337024-16337140)
chr6 (85-201)||(11785356-11785474)
chr6 (144-201)||(16368059-16368117)
chr6 (144-201)||(7636440-7636498)
chr6 (164-201)||(736853-736890)
chr6 (144-201)||(3339512-3339569)
chr6 (152-201)||(12501475-12501524)
chr6 (144-201)||(17417248-17417305)
chr6 (85-170)||(17442854-17442939)
chr6 (88-201)||(23653850-23653962)
chr6 (144-201)||(25995443-25995500)
chr6 (164-201)||(26396508-26396545)
chr6 (144-201)||(27334859-27334916)
chr6 (144-201)||(27395599-27395656)
chr6 (85-201)||(11635618-11635734)
chr6 (85-201)||(19789030-19789146)
chr6 (143-199)||(29197727-29197783)
[»] scaffold0154 (1 HSPs)
scaffold0154 (93-201)||(4316-4424)
[»] scaffold0003 (1 HSPs)
scaffold0003 (85-201)||(337119-337235)
[»] scaffold0020 (1 HSPs)
scaffold0020 (85-201)||(155907-156023)
[»] scaffold0004 (1 HSPs)
scaffold0004 (85-201)||(249096-249212)
[»] scaffold0002 (2 HSPs)
scaffold0002 (85-201)||(440719-440835)
scaffold0002 (144-201)||(147269-147326)
[»] scaffold0522 (1 HSPs)
scaffold0522 (144-201)||(2517-2574)
[»] scaffold0011 (1 HSPs)
scaffold0011 (144-201)||(18596-18653)


Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 18 - 294
Target Start/End: Complemental strand, 7118653 - 7118373
Alignment:
Q  18 atttcttgcatttaaaaaagaataatgatatttgtataaatattttgtgacaatattcnnnnnnnnn---attggtcaaaaacaataaagagagaaaatt 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||            |||||||||||||||||||||  |||||||    
T  7118653 atttcttgcatttaaaaaagaataatgatatttgtataaatattttgtgataatattcttttctttttttattggtcaaaaacaataaagaatgaaaatt 7118554  T
Q  115 gaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttctaaaaagaaactcg 214  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7118553 gaagtgaaatagtaagaatgtaatgagtatatgagaaagaaagttgtatagaaatgatcataaaataattgtacaaatatcatttctaaaaagaaactcg 7118454  T
Q  215 catttacaacaacgatttaagatttgaccgactcac-ttatatcttcactaaatcatctttaaaaaacatattttataaaa 294  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  7118453 catttgcaacaacgatttaagatttgaccgactcacgttatatctttactaaatcatctttaaaaaacatattttataaaa 7118373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 20853028 - 20852920
Alignment:
Q  93 aaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaat 192  Q
    ||||||||  ||||||||||  |||| || | | ||||||||||||| |  ||||||||||||||||||  |||||| ||||||||||  ||||||||||    
T  20853028 aaaacaatggagagagaaaaaggaagagagagaataagaatataacgtgagtatgagaaagaaagttgtctaaaaattatcataaaatggttgtacaaat 20852929  T
Q  193 atcatttct 201  Q
    |||||||||    
T  20852928 atcatttct 20852920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 43186354 - 43186298
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttc 200  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||    
T  43186354 tatgagagagaaagttgtacaaaaattatcacaaaataattgtacaaatatcatttc 43186298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 14531671 - 14531622
Alignment:
Q  152 agaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||||    
T  14531671 agaaagttgtacaaaagttatcataaaatagttgtacaaatatcatttct 14531622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 23952552 - 23952495
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||| ||||||| |||||||||| | |||| ||||||||||||||||||||||||||    
T  23952552 tatgaaaaagaaaattgtacaaaagtcatcacaaaataattgtacaaatatcatttct 23952495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 30578371 - 30578250
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || | ||||||||||||||| |  ||||||||||||||||||  |||| |  ||| |||||  ||    
T  30578371 attggtcaaaaacaatggagagagaaaaaagaagagagagagtaagaatataacgtgagtatgagaaagaaagttgtttaaaagttgtcaaaaaatggtt 30578272  T
Q  185 gtacaaatatcatttctaaaaa 206  Q
    |||| ||||| |||||| ||||    
T  30578271 gtacgaatattatttctcaaaa 30578250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 6005061 - 6004945
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||| ||||  |||| || | ||||||||||||| | |  ||||||| ||||||||||  ||||||  ||| ||| || ||    
T  6005061 attggtcaaaaacaatggagagaaaaaaaggaagagagagagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaagtagtt 6004962  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  6004961 gtacaaatatcatttct 6004945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 9985632 - 9985748
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||| ||||||||||  |||| || | | |||||| |||| | |  ||||||| |||| |||||| |||| |  ||||||||||  |    
T  9985632 attggtcaaaaacaatagagagagaaaaaggaagagagagaataagaagataatgtgagtatgagagagaatgttgtataaaagttgtcataaaatagat 9985731  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  9985732 gtacaaatatcatttct 9985748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 27300463 - 27300347
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||| ||||||||||  |||| || | | |||||| |||| | | |||||||| |||||||||||||||| |  |   |||||  ||    
T  27300463 attggtcaaaaacaatagagagagaaaaaggaagagagagaataagaagataatgtgaatatgagagagaaagttgtacaaaagttgtacaaaaatggtt 27300364  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  27300363 gtacaaatatcatttct 27300347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 14228765 - 14228710
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    ||||||| |||||||||||||||| | |||| |||||| |||||||||||||||||    
T  14228765 tatgagagagaaagttgtacaaaagttatcacaaaatagttgtacaaatatcattt 14228710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 20995012 - 20995131
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||| ||||||||||  |||| || | | |||||| |||| |    ||||||| |||| |||||||||||||  |||||||||   |    
T  20995012 attggtcaaaaacaatagagagagaaaaaggaagagagagaataagaagataatgtaagtatgagagagaaggttgtacaaaaattgtcataaaatggat 20995111  T
Q  185 gtacaaatatcatttctaaa 204  Q
    ||| ||||||||||||||||    
T  20995112 gtataaatatcatttctaaa 20995131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 5924868 - 5924811
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||||| || ||||||||  ||||| ||||||||||||    
T  5924868 tatgagagagaaagttgtacaaaaattattataaaatagatgtacgaatatcatttct 5924811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 10344382 - 10344325
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||| ||||||| || ||||||||  ||||||||||||||||||    
T  10344382 tatgagagagaaagttgtccaaaaattattataaaatagatgtacaaatatcatttct 10344325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 12697728 - 12697781
Alignment:
Q  146 tgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    ||||| |||||||||| ||||||| ||||||||||| ||||| |||||||||||    
T  12697728 tgagagagaaagttgttcaaaaattatcataaaatagttgtataaatatcattt 12697781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 40380339 - 40380282
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||| |  ||||||||||  ||||||||||||||||||    
T  40380339 tatgagagagaaagttgtacaaaagttgtcataaaatagatgtacaaatatcatttct 40380282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 1646373 - 1646257
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||  ||||||||||  |||| || | | ||| || |||| | | |||||||| | ||||||||| |||||||||   |||||| ||    
T  1646373 attggtctaaaacaatggagagagaaaaaagaagagagagaataataaaataatgtgaatatgagagataaagttgtataaaaatgatacaaaaatagtt 1646274  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  1646273 gtacaaatatcatttct 1646257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 12045607 - 12045723
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || | ||||||||||||| | |  ||||||| ||||||||||  |||| |  |||  ||||  ||    
T  12045607 attggtcaaaaacaatggagagagaaaaaggaagagagagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcactaaatggtt 12045706  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  12045707 gtacaaatatcatttct 12045723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 28713210 - 28713094
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||| |||||||||| ||||| || | | |||||| |||| | | |||||||| |||| |||||| |||| | ||   |||||  ||    
T  28713210 attggtcgaaaacaatagagagagaaaaatgaagagagaaaataagaagataatgtgaatatgagagagaaggttgtataaaagttatacaaaaatggtt 28713111  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  28713110 gtacaaatatcatttct 28713094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 28720557 - 28720441
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||| |||||||||| ||||| || | | |||||| |||| | | |||||||| |||| |||||| |||| | ||   |||||  ||    
T  28720557 attggtcgaaaacaatagagagagaaaaatgaagagagaaaataagaagataatgtgaatatgagagagaaggttgtataaaagttatacaaaaatggtt 28720458  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  28720457 gtacaaatatcatttct 28720441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 28728199 - 28728083
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||| |||||||||| ||||| || | | |||||| |||| | | |||||||| |||| |||||| |||| | ||   |||||  ||    
T  28728199 attggtcgaaaacaatagagagagaaaaatgaagagagaaaataagaagataatgtgaatatgagagagaaggttgtataaaagttatacaaaaatggtt 28728100  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  28728099 gtacaaatatcatttct 28728083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 42716437 - 42716321
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  |||||||||| ||||| || | | |||||| |||| | |  ||||||| ||||||||||  |||||| || | ||| |  ||    
T  42716437 attggtcaaaaacaatggagagagaaaaatgaagagagagaataagaagataatgtgagtatgagagagaaagttgtcaaaaaattatgaaaaagtggtt 42716338  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  42716337 gtacaaatatcatttct 42716321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 6243151 - 6243064
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgat 172  Q
    ||||||||||||||||  ||||||||||  |||| || | | |||||| |||| | |  ||||||| |||||||||||||||||||||    
T  6243151 attggtcaaaaacaatggagagagaaaaaagaagagagagaataagaagataatgtgagtatgagagagaaagttgtacaaaaatgat 6243064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 41675382 - 41675437
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    ||||| ||| ||||||||| |||||| |||| ||||| ||||||||||||||||||    
T  41675382 tatgaaaaataaagttgtaaaaaaattatcaaaaaatgattgtacaaatatcattt 41675437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 10128698 - 10128640
Alignment:
Q  146 tgagaaagaaagttg-tacaaaaatgatcataaaataattgtacaaatatcatttctaa 203  Q
    ||||||||||||||| ||||||||| || ||||||| ||||| ||||||||| ||||||    
T  10128698 tgagaaagaaagttgttacaaaaattattataaaattattgttcaaatatcaattctaa 10128640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 31665944 - 31666058
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||||||||| ||   ||||||||||  |||| || | || |||||||||| | | |||||||||||||||||||  ||||||  ||| |||||  ||    
T  31665944 attggtcaaaaataaaggagagagaaaaaggaagagagagagcaagaatataatgcgaatatgagaaagaaagttgtctaaaaattgtcacaaaatggtt 31666043  T
Q  185 gtacaaatatcattt 199  Q
    ||||| |||||||||    
T  31666044 gtacatatatcattt 31666058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 206
Target Start/End: Complemental strand, 36023672 - 36023642
Alignment:
Q  176 aaaataattgtacaaatatcatttctaaaaa 206  Q
    |||||||||||||||||||||||||||||||    
T  36023672 aaaataattgtacaaatatcatttctaaaaa 36023642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 41519928 - 41519870
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaat-aattgtacaaatatcatttct 201  Q
    |||||||||||||||||| ||||| |  ||||||||| |||||||||||||| ||||||    
T  41519928 tatgagaaagaaagttgtgcaaaagttgtcataaaatgaattgtacaaatattatttct 41519870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 201
Target Start/End: Original strand, 42130 - 42159
Alignment:
Q  172 tcataaaataattgtacaaatatcatttct 201  Q
    ||||||||||||||||||||||||||||||    
T  42130 tcataaaataattgtacaaatatcatttct 42159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 9314469 - 9314412
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||| |||||||||||||  |||||||||   ||||||||||||||||||    
T  9314469 tatgagagagaaggttgtacaaaaattgtcataaaatggatgtacaaatatcatttct 9314412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 14548779 - 14548893
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||| |||||||||  ||||||||||  |||| || |  |||||||||||| | |  ||||||| ||||||||||  |||||| || | |||||  ||    
T  14548779 attggtaaaaaacaatggagagagaaaaaggaagagaga--gtaagaatataatgtgagtatgagagagaaagttgtctaaaaattattaaaaaatggtt 14548876  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  14548877 gtacaaatatcatttct 14548893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 25430763 - 25430678
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatg 170  Q
    ||||||||||||||||| ||||||||||  |||| || | | |||||| |||| | |  ||||||| |||| ||||||||||||||    
T  25430763 attggtcaaaaacaatagagagagaaaaaggaagagagagaataagaagataatgtgagtatgagatagaaggttgtacaaaaatg 25430678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 29913602 - 29913565
Alignment:
Q  164 aaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  29913602 aaaaattatcataaaatagttgtacaaatatcatttct 29913565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 30927944 - 30928001
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||||||||||  ||| ||| |  |||||||||||||||||||    
T  30927944 tatgagagagaaagttgtacaaaaattgtcacaaattggttgtacaaatatcatttct 30928001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 32234406 - 32234519
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||| ||||||| ||||||||||  |||| || | | |||||| |||| | | |||||| | ||||| ||||| |||||| ||   |||||| ||    
T  32234406 attggtcaataacaatatagagagaaaaaagaagagagagaataagaagataatgtgaatatgaaagagaaaattgtataaaaattatataaaaatagtt 32234505  T
Q  185 gtacaaatatcatt 198  Q
    ||||||||||||||    
T  32234506 gtacaaatatcatt 32234519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 33817214 - 33817157
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||| ||||||||||||||||||||  | | ||| | ||||||||||||||||||||    
T  33817214 tatgaaaaagaaagttgtacaaaaattgttacaaattgattgtacaaatatcatttct 33817157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 41406869 - 41406926
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||  ||||||  ||| ||||| ||||||||||||||||||||    
T  41406869 tatgagagagaaagttgttaaaaaattgtcaaaaaatgattgtacaaatatcatttct 41406926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 23709093 - 23708977
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||| ||||||| ||||||||||  |||| || | | |||||| |||| | |  ||||||| |||| ||||||||||| | ||   |||||  ||    
T  23709093 attggtcaagaacaatagagagagaaaaaggaagagagagaataagaagataatgtgagtatgagatagaaggttgtacaaaagttatacaaaaatggtt 23708994  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  23708993 gtacaaatatcatttct 23708977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 31806416 - 31806300
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||| ||||| |||||||||||||||  |||| || | | |||||| |||  | | |||||||| ||||||||||  ||||||  | | |||||  ||    
T  31806416 attggtaaaaaataataaagagagaaaaaggaagagagagaataagaagatattgtgaatatgagagagaaagttgtcaaaaaattgttagaaaatggtt 31806317  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  31806316 gtacaaatatcatttct 31806300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 201
Target Start/End: Complemental strand, 33115946 - 33115906
Alignment:
Q  161 tacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||||| |||| ||||||||| ||||||||||||||||    
T  33115946 tacaaaaattatcacaaaataattatacaaatatcatttct 33115906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 44380568 - 44380684
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||| ||||||||||   ||| || | ||| ||||||||| | |  ||||||| ||||||||||  |||  |  ||| |||||  ||    
T  44380568 attggtcaaaaacaatagagagagaaaaagtaagagagagagtcagaatataatgtgagtatgagagagaaagttgtttaaaggttgtcacaaaatggtt 44380667  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  44380668 gtacaaatatcatttct 44380684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 6686163 - 6686047
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||| |||||||||| ||||| |||| | |||||| |||| |    ||||||| |||| ||||||||||||| || ||||||||| |    
T  6686163 attggtcaaaaacaatagagagagaaaaatgaagagaaagaataagaagataatgtaagtatgagagagaatgttgtacaaaaattattataaaataaat 6686064  T
Q  185 gtacaaatatcatttct 201  Q
    |||| ||||||||||||    
T  6686063 gtacgaatatcatttct 6686047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 29577390 - 29577506
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  |||||||||| ||||| || | | |||||| |||| | |  ||||||||||||||||||||||||||  |   |||||| ||    
T  29577390 attggtcaaaaacaatggagagagaaaaatgaagagagagaataagaagataatgtgagtatgagaaagaaagttgtacaaaaattgtacaaaaatagtt 29577489  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  29577490 gtacaaatatcatttct 29577506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 44272766 - 44272880
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||||||||||||||  |||| || |  |||||||||||| | |  ||||||| ||||||||||  |||| |  ||| |||||| ||    
T  44272766 attggtcaaaaacaataaagagagaaaaaagaagagaga--gtaagaatataatgtgagtatgagagagaaagttgtttaaaagttgtcaaaaaatagtt 44272863  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  44272864 gtacaaatatcatttct 44272880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 6126970 - 6126854
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||| ||||||| |||||||||| ||||| || | | |||||| |||| | |  ||||||| |||| |||||||||||||  ||||||||||  |    
T  6126970 attggtcaagaacaatagagagagaaaaatgaagagagagaataagaagataatgtgagtatgagagagaatgttgtacaaaaattgtcataaaatagat 6126871  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||| ||||||    
T  6126870 gtacaaatatgatttct 6126854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 47105969 - 47105912
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||| | |||| ||| ||||||||||||||||||||||    
T  47105969 tatgagagagaaagttgtacaaaagttatcacaaattaattgtacaaatatcatttct 47105912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 32901446 - 32901330
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||   ||| || ||| ||||||| | | | |  ||||| | |||||||||| ||||||| |||| |||||| ||    
T  32901446 attggtcaaaaacaatggagagagaaaaagtaagagagataataagaatgtcatgtgagtatgaaagagaaagttgtgcaaaaattatcaaaaaatagtt 32901347  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  32901346 gtacaaatatcatttct 32901330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 54801501 - 54801557
Alignment:
Q  145 atgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||| ||||| |||||||||||| || ||||||| ||||||||||||||||||||    
T  54801501 atgagagagaaaattgtacaaaaattataataaaatgattgtacaaatatcatttct 54801557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 3475928 - 3475870
Alignment:
Q  143 atatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||| |||||||||||||||| |  |||||||||  |||||||||||||||||||    
T  3475928 atatgagagagaaagttgtacaaaagttgtcataaaatggttgtacaaatatcatttct 3475870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 34114071 - 34114185
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| |||||||||  ||||||||| ||||| || | | | ||||||||||| |  ||||||| | ||||||||  |||| | || |||||||| ||    
T  34114071 attggtccaaaacaatatggagagaaaaatgaagagagagaatgagaatataacgtgagtatgagagaaaaagttgtcaaaaagttataataaaatagtt 34114170  T
Q  185 gtacaaatatcattt 199  Q
    |||||||||||||||    
T  34114171 gtacaaatatcattt 34114185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 53662440 - 53662498
Alignment:
Q  143 atatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||| ||||||||||||||||||  | | |||||| |||||||||||||||||||    
T  53662440 atatgagagagaaagttgtacaaaaattgttacaaaatagttgtacaaatatcatttct 53662498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 24235378 - 24235321
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||||||||||  ||| ||| | ||||||||||||||||||||    
T  24235378 tatgagagagaaagttgtacaaaaattgtcacaaattgattgtacaaatatcatttct 24235321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 336819 - 336878
Alignment:
Q  143 atatgagaaagaaagttgt-acaaaaatgatcataaaataattgtacaaatatcatttcta 202  Q
    |||||||| |||||||||| ||||||||  ||| |||||||||||||||||||||||||||    
T  336819 atatgagagagaaagttgtcacaaaaattgtca-aaaataattgtacaaatatcatttcta 336878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 2615155 - 2615199
Alignment:
Q  158 ttgtacaaaaatgatcataaaataattgtacaaatatcatttcta 202  Q
    |||||||||||| ||| |||||||| |||||||||||||||||||    
T  2615155 ttgtacaaaaattatcgtaaaataaatgtacaaatatcatttcta 2615199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 10096696 - 10096812
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||| |||||||||| ||||| || | | ||||||||||| | |  ||||||||||||| ||||  |||| |  | ||||| |  ||    
T  10096696 attggtccaaaacaatagagagagaaaaatgaagagagagaataagaatataatgtgagtatgagaaagaaaattgtcaaaaagttgtaataaagtggtt 10096795  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  10096796 gtacaaatatcatttct 10096812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 12074105 - 12074221
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||| ||||  ||||||||||  |||| || | | ||||| ||||| | | |||||||||||| | ||||  ||||||  |||||||||  ||    
T  12074105 attggtcaaaatcaatggagagagaaaaaagaagagagagaataagagtataatgtgaatatgagaaagagaattgtcaaaaaattgtcataaaatggtt 12074204  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  12074205 gtacaaatatcatttct 12074221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 17363347 - 17363231
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||| ||||||||||  |||| || | | ||||||||||| | |  ||||||| ||||||||||  |||| |  | ||||| | |||    
T  17363347 attggtccaaaacaatagagagagaaaaaagaagagagagaataagaatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaagtgatt 17363248  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  17363247 gtacaaatatcatttct 17363231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 23094493 - 23094377
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||| || |||  |||||||||| ||| | || | ||||||||||||| |   |||||| | ||||||||||  |||| | |||| ||||| |||    
T  23094493 attggtcaataataatggagagagaaaaatgatgagagagagtaagaatataatgtaaatatgaaagagaaagttgtctaaaagttatcacaaaatgatt 23094394  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  23094393 gtacaaatatcatttct 23094377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 36110251 - 36110135
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||||||||| |||| |||||||||   |||| || | | |||||| |||| | | |||||||| |||| |||||||||||||  |   |||||| ||    
T  36110251 attggtcaaaaataatagagagagaaagaggaagagagagaataagaagataatgtgaatatgagagagaaggttgtacaaaaattgtacaaaaatagtt 36110152  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  36110151 gtacaaatatcatttct 36110135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 39880984 - 39881100
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||||||||| |||| |||||||||| ||||| || | | |||||| |||| | |  ||||||| ||||||||||  |||| |  | | ||||| |||    
T  39880984 attggtcaaaaataatagagagagaaaaatgaagagagagaataagaagataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatgatt 39881083  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  39881084 gtacaaatatcatttct 39881100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 46791945 - 46792029
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaat 169  Q
    |||| |||||||||||| ||||||||||  |||| || ||| |||||| |||| | |  ||||||||||||| ||||||||||||    
T  46791945 attgatcaaaaacaatagagagagaaaaaggaagagagataataagaagataatgtgagtatgagaaagaaaattgtacaaaaat 46792029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 52487281 - 52487337
Alignment:
Q  143 atatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    |||||||| |||||||| ||||||||| |||| ||| || |||||||||||||||||    
T  52487281 atatgagagagaaagttatacaaaaattatcacaaattagttgtacaaatatcattt 52487337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 19879831 - 19879776
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    ||||||| ||| | |||| ||||||| |||||||||| ||||||||||||||||||    
T  19879831 tatgagagagagaattgttcaaaaattatcataaaatgattgtacaaatatcattt 19879776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 9472526 - 9472592
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttctaaaaagaaa 210  Q
    ||||||| ||||||||||  |||||| || | |||||| |||||||||||||||||||  |||||||    
T  9472526 tatgagagagaaagttgtcaaaaaattattagaaaatagttgtacaaatatcatttctctaaagaaa 9472592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 39158164 - 39158106
Alignment:
Q  144 tatgagaaagaaagttgt-acaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||| |||||||| |||| ||||| ||||| ||||||||||||||    
T  39158164 tatgagagagaaagttgtcacaaaaattatcaaaaaatgattgttcaaatatcatttct 39158106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 45779304 - 45779370
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttctaaaaagaaa 210  Q
    ||||||||||||||||||  |||||| || | |||||| ||||| |||||||||||||  |||||||    
T  45779304 tatgagaaagaaagttgtcaaaaaattataacaaaatagttgtataaatatcatttctctaaagaaa 45779370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 51107453 - 51107511
Alignment:
Q  143 atatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||| |||||||||| ||||||| ||   ||||| ||||||||||||||||||||    
T  51107453 atatgagagagaaagttgtgcaaaaattatacaaaaatgattgtacaaatatcatttct 51107511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 3223047 - 3222990
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||| |  ||| ||| | ||||||||||||||||||||    
T  3223047 tatgagagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttct 3222990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 9032838 - 9032781
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||| |  ||| ||| | ||||||||||||||||||||    
T  9032838 tatgagagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttct 9032781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 12074524 - 12074475
Alignment:
Q  150 aaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    ||||| |||||| ||||||| ||||||||||| ||||| |||||||||||    
T  12074524 aaagagagttgttcaaaaattatcataaaatagttgtataaatatcattt 12074475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 20056454 - 20056397
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||| ||||||| || | | |||| |||||||||||||||||||    
T  20056454 tatgagagagaaagttgtccaaaaattataacataatagttgtacaaatatcatttct 20056397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 30866403 - 30866354
Alignment:
Q  152 agaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||||||  |||| | |||||||||| ||||||||||||||||||||    
T  30866403 agaaagttgtcaaaaatttatcataaaatgattgtacaaatatcatttct 30866354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 36444408 - 36444465
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||  |||| | ||||||||||  |||||||||||||||||||    
T  36444408 tatgagagagaaagttgttaaaaagttatcataaaatggttgtacaaatatcatttct 36444465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 40258263 - 40258206
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||| | ||||||| ||||||||||  ||||| |||||||||||||    
T  40258263 tatgagagagaaagttattcaaaaattatcataaaatggttgtataaatatcatttct 40258206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 40721977 - 40722034
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||| ||||||| || |||||||   ||||||||||||||||||    
T  40721977 tatgagagagaaagttgtccaaaaattattataaaatggatgtacaaatatcatttct 40722034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 46480525 - 46480574
Alignment:
Q  152 agaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||| |||||||||||| | || ||| ||||||||||||||||||||||    
T  46480525 agaaaattgtacaaaaattaccacaaattaattgtacaaatatcatttct 46480574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 52669622 - 52669679
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||| | |||| ||| |  |||||||||||||||||||    
T  52669622 tatgagagagaaagttgtacaaaagttatcacaaattgtttgtacaaatatcatttct 52669679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 24772788 - 24772672
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  |||||||||| ||||| || | | ||||| ||||| | |  ||||||| |||| |||||  |||| |  |||||||||   |    
T  24772788 attggtcaaaaacaattgagagagaaaaatgaagagagagaataagagtataatgtgagtatgagagagaaggttgtcaaaaagttgtcataaaatggat 24772689  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  24772688 gtacaaatatcatttct 24772672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 32464638 - 32464674
Alignment:
Q  165 aaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  32464638 aaaattatcataaaatagttgtacaaatatcatttct 32464674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 33438162 - 33438110
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataa 137  Q
    ||||||||||||||||| |||||||||| | ||| || | |||||||||||||    
T  33438162 attggtcaaaaacaatagagagagaaaaataaagagagagagtaagaatataa 33438110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 33484123 - 33484175
Alignment:
Q  146 tgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatt 198  Q
    ||||| |||||||||| ||||||| |||| |||||  ||||||||||||||||    
T  33484123 tgagagagaaagttgtccaaaaattatcacaaaatggttgtacaaatatcatt 33484175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 40335846 - 40335790
Alignment:
Q  145 atgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||| ||||||||||  ||||||  | ||||||| ||||||||||||||||||||    
T  40335846 atgagagagaaagttgtcaaaaaattgtaataaaatgattgtacaaatatcatttct 40335790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 43864150 - 43864035
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||| ||||| ||||||||||  |||| || ||| ||| ||||||| | |  ||||||| | |||||||| |||||||  |   |||||| ||    
T  43864150 attggtcaaaatcaatagagagagaaaaaggaagagagataataaaaatataatgtgagtatgagagaaaaagttgt-caaaaattgtaccaaaatagtt 43864052  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  43864051 gtacaaatatcatttct 43864035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 44495988 - 44496064
Alignment:
Q  125 agtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||||||||   | |||||||| ||||| || |  |||||| |||| ||||||||||||||| ||||||||||    
T  44495988 agtaagaatataatatgaatatgagagagaaaattatctaaaaattatcaaaaaataattgtacaactatcatttct 44496064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 45693429 - 45693536
Alignment:
Q  92 aaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaa 191  Q
    |||||||||| ||||||||||   ||| || | | |||||| |||||| | |||||||||| ||||||||  |||||| |||||||||||||||||||||    
T  45693429 aaaaacaatagagagagaaaaagaaagagagagaataagaaaataacgtgaatatgagaaaaaaagttgtcaaaaaattatcataaaataattgtacaaa 45693528  T
Q  192 tatcattt 199  Q
    ||||||||    
T  45693529 tatcattt 45693536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 11828774 - 11828859
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatg 170  Q
    ||||||||||||||||  |||||||||| ||||  |||| | |||||| |||||| | |||||||| |||||||||||||||||||    
T  11828774 attggtcaaaaacaatggagagagaaaaatgaatagaaagaataagaagataacgtgaatatgagagagaaagttgtacaaaaatg 11828859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 11152653 - 11152769
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||| ||||||||||  |||| |||| | |||||| ||||   |  ||||||| |||| ||||||||||||| ||   ||||| |||    
T  11152653 attggtcaaaaacaatatagagagaaaaaggaagagaaaaaataagaagataatatgagtatgagagagaaggttgtacaaaaattatataaaaatgatt 11152752  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  11152753 gtacaaatatcatttct 11152769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 12257018 - 12256902
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||| |||||||||| ||||| || | | |||||| |||| | |  ||||||| |||| ||||||||||| | ||   ||||| |||    
T  12257018 attggtcaaaaacaatagagagagaaaaatgaagagagagaataagaagataatgtgagtatgagagagaaggttgtacaaaagttatacaaaaatgatt 12256919  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  12256918 gtacaaatatcatttct 12256902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 8805290 - 8805233
Alignment:
Q  142 tatatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    ||||||||| |||||||||| ||||||| ||||||||||| ||||||| |||||||||    
T  8805290 tatatgagatagaaagttgtccaaaaattatcataaaatagttgtacatatatcattt 8805233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 43621902 - 43622015
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||| |||||||||||  |||||||||| |||||  | | |||||||| ||||||    ||||||| |||||||||| ||||| |  |||||||||| ||    
T  43621902 attgatcaaaaacaatggagagagaaaaatgaagaaagaaagtaagaagataacgtaagtatgagagagaaagttgttcaaaagttgtcataaaatagtt 43622001  T
Q  185 gtacaaatatcatt 198  Q
    ||||||||||||||    
T  43622002 gtacaaatatcatt 43622015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 18508195 - 18508079
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||| ||||||||||  |||| || | | |||||| |||| | |  ||||||| |||| ||| ||||||| | ||||||||||   |    
T  18508195 attggtcaaaaacaatagagagagaaaaaggaagagagagaataagaagataatgtgagtatgagagagaatgttatacaaaagttatcataaaatggat 18508096  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  18508095 gtacaaatatcatttct 18508079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 9384433 - 9384376
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||||| ||   |||||| |||||||||||||||||||    
T  9384433 tatgagagagaaagttgtacaaaaattatgtaaaaatagttgtacaaatatcatttct 9384376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 12784392 - 12784469
Alignment:
Q  125 agtaagaatataacgagtatatgagaaagaaagttgt-acaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||| ||||||||| |  ||||||| |||||||||| |||||||| || |||||||  |||||||||||||||||||    
T  12784392 agtaaaaatataacgtgagtatgagagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttct 12784469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 14957646 - 14957589
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||||||||| ||||||| |||| |||| ||||||||||| || |||||||||||    
T  14957646 tatgagaaagaaaattgtacagaaattatcacaaaataattgttcatatatcatttct 14957589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 29871365 - 29871422
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||||| |||||||| ||||| |  ||||||| ||||||||||||||||||||||    
T  29871365 tatgagaaaaaaagttgttcaaaagttgtcataaactaattgtacaaatatcatttct 29871422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 38021414 - 38021357
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||||||||||||||  |||||| ||  ||||||| |||||||||||||||||||    
T  38021414 tatgagaaagaaagttgtcaaaaaattatactaaaatagttgtacaaatatcatttct 38021357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 41353510 - 41353567
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||  |||||| |||||||| | ||||||||||||||||||||    
T  41353510 tatgagagagaaagttgttaaaaaattatcataaattgattgtacaaatatcatttct 41353567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 5962696 - 5962640
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttc 200  Q
    ||||||||| |||||||| ||||||| |||| | ||| |||||||||||||||||||    
T  5962696 tatgagaaataaagttgtccaaaaattatcacataatgattgtacaaatatcatttc 5962640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 32688498 - 32688614
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || ||| ||||| ||||| | |  ||||||| ||||||||||  ||||||  ||| ||| |  ||    
T  32688498 attggtcaaaaacaatggagagagaaaaaggaagagacataataagagtataatgtgagtatgagagagaaagttgtcaaaaaattgtcagaaagtggtt 32688597  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  32688598 gtacaaatatcatttct 32688614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 33857334 - 33857218
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  |||||||||| ||||| || | | ||||||||| | | |  ||||||| ||||||||||  ||||||  | | ||||  |||    
T  33857334 attggtcaaaaacaatggagagagaaaaatgaagagagagaataagaatatcatgtgagtatgagagagaaagttgtcaaaaaattgttagaaaaagatt 33857235  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  33857234 gtacaaatatcatttct 33857218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 35792414 - 35792526
Alignment:
Q  89 gtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgtac 188  Q
    |||||||||||| |||||||||||   ||| || | ||||||||||||| | |  ||||||| | ||||||||  |||||| |||| ||| |  ||||||    
T  35792414 gtcaaaaacaatgaagagagaaaaagtaagagagagagtaagaatataatgtgagtatgagataaaaagttgtctaaaaattatcacaaagttgttgtac 35792513  T
Q  189 aaatatcatttct 201  Q
    |||||||||||||    
T  35792514 aaatatcatttct 35792526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 36383579 - 36383463
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || ||  |||||| || | | |  ||||||| |||||||||||||||| |  ||| |||||  ||    
T  36383579 attggtcaaaaacaatggagagagaaaaaggaagagagatgataagaacatcatgtgagtatgagagagaaagttgtacaaaagttgtcacaaaatcttt 36383480  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  36383479 gtacaaatatcatttct 36383463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 44484610 - 44484726
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || ||  |||||| || | | |  ||||||| ||||||||||||||||||  | | |||||  ||    
T  44484610 attggtcaaaaacaatggagagagaaaaaggaagagagatgataagaacatcatgtgagtatgagagagaaagttgtacaaaaattgttacaaaatggtt 44484709  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  44484710 gtacaaatatcatttct 44484726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 5095972 - 5096023
Alignment:
Q  150 aaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||| |||||| ||||||| |||| ||||| ||||||||||||||||||||    
T  5095972 aaagagagttgtccaaaaattatcacaaaatgattgtacaaatatcatttct 5096023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 34373063 - 34373004
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttctaa 203  Q
    ||||||| |||||||||||||||||| ||   |||||  |||||||||||||||||||||    
T  34373063 tatgagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttctaa 34373004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 198
Target Start/End: Original strand, 3924158 - 3924192
Alignment:
Q  164 aaaaatgatcataaaataattgtacaaatatcatt 198  Q
    |||||| ||||||||||||||||||||||||||||    
T  3924158 aaaaattatcataaaataattgtacaaatatcatt 3924192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 6328726 - 6328668
Alignment:
Q  143 atatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||| |||||||||||||||||| ||   |||||  |||||||||||||||||||    
T  6328726 atatgagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttct 6328668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 202
Target Start/End: Complemental strand, 8087401 - 8087371
Alignment:
Q  172 tcataaaataattgtacaaatatcatttcta 202  Q
    |||||||||||||||||||||||||||||||    
T  8087401 tcataaaataattgtacaaatatcatttcta 8087371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 19520135 - 19520081
Alignment:
Q  143 atatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcat 197  Q
    |||||||||||||| |||| ||||||| ||| |||||| |||||| |||||||||    
T  19520135 atatgagaaagaaaattgttcaaaaattatcgtaaaatgattgtataaatatcat 19520081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 38027569 - 38027651
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaa 167  Q
    ||||||||||||||||| ||||||||||  |||| || | | |||||| |||| | | |||||||| |||| |||||||||||    
T  38027569 attggtcaaaaacaatagagagagaaaaaggaagagagagaataagaagataatgtgaatatgagagagaaggttgtacaaaa 38027651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 40371178 - 40371120
Alignment:
Q  143 atatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||| | || ||||||||||||| |||||||||||  |||||||||| |||||||    
T  40371178 atatgagagataaggttgtacaaaaattatcataaaatagatgtacaaataacatttct 40371120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 3196100 - 3196157
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||| |  ||| ||| | ||||||||||||||||||||    
T  3196100 tatgagagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttct 3196157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 6884968 - 6884911
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||| |||| | |||| ||| || |||||||||||||||||||    
T  6884968 tatgagagagaaagttgtataaaagttatcacaaattagttgtacaaatatcatttct 6884911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 206
Target Start/End: Original strand, 8555285 - 8555365
Alignment:
Q  125 agtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttctaaaaa 206  Q
    ||||||||||||| | |  ||||||| ||||||||||  ||||||  ||| |||| | ||||||||||||||||||||||||    
T  8555285 agtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcaaaaaaga-ttgtacaaatatcatttctaaaaa 8555365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 9695018 - 9695131
Alignment:
Q  88 ggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgta 187  Q
    ||||||||| ||| ||||||||||| ||||| || | | ||||||| | | | |  ||||||| |||||||||| ||||||| |||  | |||  |||||    
T  9695018 ggtcaaaaataatgaagagagaaaaatgaagagagagaataagaatctcatgtgagtatgagagagaaagttgtccaaaaattatctcataatggttgta 9695117  T
Q  188 caaatatcatttct 201  Q
    ||||||||||||||    
T  9695118 caaatatcatttct 9695131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 10288208 - 10288151
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| | ||||||||  |||||| |||| |||||| |||||||||||||||||||    
T  10288208 tatgagagaaaaagttgtctaaaaattatcacaaaatagttgtacaaatatcatttct 10288151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 13850197 - 13850254
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||||| ||   ||||| |||||| |||||||||||||    
T  13850197 tatgagagagaaagttgtacaaaaattatatcaaaatgattgtataaatatcatttct 13850254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 23048096 - 23048153
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||| ||||||||| |||  ||| | ||||||||||||||||||||    
T  23048096 tatgagagagaaagttatacaaaaattatctcaaattgattgtacaaatatcatttct 23048153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 27307244 - 27307301
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||| |  ||| ||| | ||||||||||||||||||||    
T  27307244 tatgagagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttct 27307301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 29893660 - 29893611
Alignment:
Q  152 agaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||||||||||| | |||| ||| || |||||||||||||||||||    
T  29893660 agaaagttgtacaaaagttatcacaaattagttgtacaaatatcatttct 29893611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 34144564 - 34144621
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||||||||||  ||| ||| |  |||||||||||||||||||    
T  34144564 tatgagagagaaagttgtacaaaaattgtcacaaattggttgtacaaatatcatttct 34144621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 35171239 - 35171296
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||| |||||  ||| |||||  |||||||||||||||||||    
T  35171239 tatgagagagaaagttgtaccaaaattgtcacaaaatggttgtacaaatatcatttct 35171296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 38246764 - 38246821
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||| |||||||||  ||| ||| | ||||||||||||||||||||    
T  38246764 tatgagagagaaagttctacaaaaattgtcacaaattgattgtacaaatatcatttct 38246821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 38598303 - 38598388
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatg 170  Q
    ||||||||||||||||| ||||||||||  |||| || | | |||||| |||| | |  ||||||| |||| ||||||||||||||    
T  38598303 attggtcaaaaacaatagagagagaaaaaagaagagagagaataagaagataatgtgagtatgagagagaaggttgtacaaaaatg 38598388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 43691018 - 43691055
Alignment:
Q  162 acaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  43691018 acaaaaattatcataaaataattgaacaaatatcattt 43691055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 6365303 - 6365187
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||||||||||||| |||||||||||  |||| || | | ||||| ||||| | | ||||| || ||||| ||||  ||||||  ||| ||| |  ||    
T  6365303 attggtcaaaaacaatgaagagagaaaaaggaagagagaaaataagagtataatgtgaatatgtgagagaaaattgtcaaaaaattgtcacaaagtggtt 6365204  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  6365203 gtacaaatatcatttct 6365187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 6742364 - 6742476
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||||||||| | || ||||||||||  |||| || | |||||||| |||| | | |||||| | |||||||||| ||||| |  ||| ||||| |||    
T  6742364 attggtcaaaaatagtagagagagaaaaaggaagagagaaagtaagaagataatgtgaatatgaaagagaaagttgttcaaaagttgtcacaaaatgatt 6742463  T
Q  185 gtacaaatatcat 197  Q
     ||||||||||||    
T  6742464 ttacaaatatcat 6742476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 8352952 - 8352836
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||| ||||||||| |  ||||||||||  |||| || | ||||||||||||| | |  ||||||| ||||| ||||  |||| | || | |||||| ||    
T  8352952 attgatcaaaaacactggagagagaaaaaggaagagagagagtaagaatataatgtgagtatgagagagaaaattgtctaaaagttattaaaaaatagtt 8352853  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  8352852 gtacaaatatcatttct 8352836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 9449369 - 9449485
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| |||||||||  |||||||||   ||| || ||| ||||||||||| | | |||||||| ||||||||||  |||| | |||| ||| | | |    
T  9449369 attggtctaaaacaatagtgagagaaaaagaaagagagatattaagaatataatgtgaatatgagagagaaagttgttaaaaagttatcaaaaagtgaat 9449468  T
Q  185 gtacaaatatcatttct 201  Q
    ||||| |||||||||||    
T  9449469 gtacatatatcatttct 9449485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 23344943 - 23345059
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||| ||||||||||  |||| || | | ||| | ||||| | | |||||||| |||| |||||  |||| |  | ||||||| | |    
T  23344943 attggtcaaaaacaatagagagagaaaaaggaagagagagaataaaagtataatgtgaatatgagagagaaggttgtcaaaaagttgttataaaatgaat 23345042  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  23345043 gtacaaatatcatttct 23345059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 31635764 - 31635880
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||||||||| |||| ||||||||||  |||| || ||| |||||| |||| | |  ||||||| ||||||||||  |||| |  | | |||||  ||    
T  31635764 attggtcaaaaataatagagagagaaaaaggaagagagataataagaagataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatggtt 31635863  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  31635864 gtacaaatatcatttct 31635880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 35705871 - 35705986
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || | | |||||| |||||| |  ||||| | ||||||||||| |||||| ||   |||||  ||    
T  35705871 attggtcaaaaacaatggagagagaaaaaggaagagagagaataagaagataacgtgagtatgaaagagaaagttgta-aaaaattatacaaaaatggtt 35705969  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  35705970 gtacaaatatcatttct 35705986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 39744548 - 39744664
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||| ||||| ||||||||||  | || || | | ||||||| ||| | | |||||||| ||||||||||| |||| |  | | ||| | |||    
T  39744548 attggtcaaaatcaatagagagagaaaaaggtagagagaaaataagaatgtaatgtgaatatgagagagaaagttgtaaaaaagttgttagaaattgatt 39744647  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  39744648 gtacaaatatcatttct 39744664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 7e-18; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 49014353 - 49014467
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||   ||| |||| ||||| ||||||| |||| ||||||| ||||| |||||||||||| |||| |||||||||    
T  49014353 attggtcaaaaacaatgtagagagaaaaagaaagcgaaagagtaaaaatataatgagtttatgagagagaaaattgtacaaaaattatcacaaaataatt 49014452  T
Q  185 gtacaaatatcattt 199  Q
     ||| ||||| ||||    
T  49014453 atactaatattattt 49014467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 17039274 - 17039158
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  |||||||||| ||||| || | | |||||| |||| | |  ||||||| |||||||||||||||||| ||   |||||| ||    
T  17039274 attggtcaaaaacaatgcagagagaaaaatgaagagagagaataagaagataatgtgagtatgagagagaaagttgtacaaaaattatacaaaaatagtt 17039175  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  17039174 gtacaaatatcatttct 17039158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 43079586 - 43079702
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || | ||||||||||||| | |  ||||||| |||||||||| ||||||| |||| ||| |  ||    
T  43079586 attggtcaaaaacaatggagagagaaaaaggaagagagaaagtaagaatataatgtgagtatgagagagaaagttgtccaaaaattatcacaaagtggtt 43079685  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  43079686 gtacaaatatcatttct 43079702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 35212967 - 35213030
Alignment:
Q  143 atatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttctaaaaa 206  Q
    |||||||| ||||||||||||||||||  |   |||||||||||||||||||||||||||||||    
T  35212967 atatgagagagaaagttgtacaaaaattgtagcaaaataattgtacaaatatcatttctaaaaa 35213030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 35857555 - 35857500
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    ||||||| | |||||||||||||||| |||||||| ||||||||||||||||||||    
T  35857555 tatgagagataaagttgtacaaaaattatcataaattaattgtacaaatatcattt 35857500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 29763888 - 29763826
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttctaaaaa 206  Q
    |||||||||||||||||||||||| | |||| |||||  ||||||||||||||||||| ||||    
T  29763888 tatgagaaagaaagttgtacaaaagttatcacaaaatggttgtacaaatatcatttctcaaaa 29763826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 43255580 - 43255634
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatt 198  Q
    ||||||||||||| ||||||||||||  ||| |||||||||||||||||||||||    
T  43255580 tatgagaaagaaaattgtacaaaaattgtcacaaaataattgtacaaatatcatt 43255634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 44175603 - 44175537
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttctaaaaagaaa 210  Q
    ||||||| |||||||||||||||| | |||| ||||| ||||||||||||| |||||| ||||||||    
T  44175603 tatgagagagaaagttgtacaaaagttatcacaaaatgattgtacaaatattatttctcaaaagaaa 44175537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 24380675 - 24380760
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatg 170  Q
    ||||||||||||||||||||||||||||  |||| || | | |||||| |||| | |  ||||||||||||||||||| |||||||    
T  24380675 attggtcaaaaacaataaagagagaaaaaagaagagagagaataagaagataatgtgagtatgagaaagaaagttgtataaaaatg 24380760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 27070623 - 27070738
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||||||||||||||  |||| || ||| ||| ||||||| | |  || |||| |||||||||| ||||| |  | ||||||| |||    
T  27070623 attggtccaaaacaataaagagagaaaaaagaagagagataataaaaatataatgtgagtacgagagagaaagttgt-caaaagttgtaataaaatgatt 27070721  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  27070722 gtacaaatatcatttct 27070738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 27207690 - 27207575
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||||||||||||||  |||| || ||| ||| ||||||| | |  || |||| |||||||||| ||||| |  | ||||||| |||    
T  27207690 attggtccaaaacaataaagagagaaaaaagaagagagataataaaaatataatgtgagtacgagagagaaagttgt-caaaagttgtaataaaatgatt 27207592  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  27207591 gtacaaatatcatttct 27207575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 40693482 - 40693598
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||| ||||||||||  |||| || | ||||| ||||||| |    ||||||| ||||||||||  |||| |  ||| |||||| ||    
T  40693482 attggtcaaaaacaatagagagagaaaaaggaagagagagagtaaaaatataatgtaagtatgagagagaaagttgtctaaaagttgtcaaaaaatagtt 40693581  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  40693582 gtacaaatatcatttct 40693598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 44187808 - 44187692
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || | ||||||||||||| | |  ||||||||| ||||||||  |||| |  ||| ||||| |||    
T  44187808 attggtcaaaaacaatggagagagaaaaaagaagagagagagtaagaatataatgtgagtatgagaaataaagttgtttaaaagttgtcaaaaaatgatt 44187709  T
Q  185 gtacaaatatcatttct 201  Q
    ||||| |||||||||||    
T  44187708 gtacacatatcatttct 44187692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 4971388 - 4971291
Alignment:
Q  104 gagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||||  |||| || ||||||||||||||| | |  ||||||| ||||||||||| |||| |  ||| |||||  |||||||||||||||||||    
T  4971388 gagagaaaaaggaagagagatagtaagaatataatgtgagtatgagagagaaagttgtataaaagttgtcacaaaatggttgtacaaatatcatttct 4971291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 10014968 - 10015025
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| | |||||||| |||| || ||||||||||| |||||||||||||||||||    
T  10014968 tatgagagaaaaagttgtccaaatattatcataaaatagttgtacaaatatcatttct 10015025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 37355182 - 37355133
Alignment:
Q  152 agaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||||| ||||||| ||||||||||||||||| |||||| ||||||    
T  37355182 agaaagttgttcaaaaattatcataaaataattgtataaatattatttct 37355133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 18157139 - 18157251
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || | ||||||||||||| | |  ||||||| ||||| ||||  |||||| |||| ||| |  ||    
T  18157139 attggtcaaaaacaatggagagagaaaaaggaagagagagagtaagaatataatgtgagtatgagagagaaaattgtctaaaaattatcacaaagtggtt 18157238  T
Q  185 gtacaaatatcat 197  Q
    |||||||||||||    
T  18157239 gtacaaatatcat 18157251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 27688754 - 27688678
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgt 161  Q
    ||||||||||||||||  ||||||||||   ||| || ||||||||||||||| | |  ||||||||||||||||||    
T  27688754 attggtcaaaaacaatggagagagaaaaagaaagagagatagtaagaatataatgtgagtatgagaaagaaagttgt 27688678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 2741906 - 2741957
Alignment:
Q  148 agaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    ||||||||| ||||  |||||| |||||||||||||||||||||||| ||||    
T  2741906 agaaagaaaattgtcaaaaaattatcataaaataattgtacaaatataattt 2741957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 37385246 - 37385301
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    ||||||| |||||||||||||||| |  ||| |||||| |||||||||||||||||    
T  37385246 tatgagagagaaagttgtacaaaagttgtcaaaaaatagttgtacaaatatcattt 37385301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 640509 - 640395
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  |||||||||| || || |||| | ||| || |||| | |  ||||||| ||||||||||||||||||  |   |||||  ||    
T  640509 attggtcaaaaacaattgagagagaaaaatgtagagaaagaataaaaacataatgtgagtatgagagagaaagttgtacaaaaattgtacaaaaatggtt 640410  T
Q  185 gtacaaatatcattt 199  Q
    |||||||||||||||    
T  640409 gtacaaatatcattt 640395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 198
Target Start/End: Complemental strand, 5724155 - 5724042
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||||||||||||||  |||| || | | ||||||||||| | |  ||||||| ||||||||||  |||| |  | ||||| |  ||    
T  5724155 attggtccaaaacaataaagagagaaaaaggaagagagaaaataagaatataatgtgagtatgagagagaaagttgttaaaaagttgtaataaagtggtt 5724056  T
Q  185 gtacaaatatcatt 198  Q
    ||||||||||||||    
T  5724055 gtacaaatatcatt 5724042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 28081795 - 28081852
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||| |||||| || | |||||  |||||||||||||||||||    
T  28081795 tatgagagagaaagttgtaaaaaaattattacaaaatggttgtacaaatatcatttct 28081852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 30769613 - 30769646
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaag 118  Q
    |||||||||||||||||||||||||||| |||||    
T  30769613 attggtcaaaaacaataaagagagaaaaatgaag 30769646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 33050241 - 33050184
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||| |  ||| |||||  |||||||||||||||||||    
T  33050241 tatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttct 33050184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 201
Target Start/End: Complemental strand, 42467314 - 42467205
Alignment:
Q  92 aaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaa 191  Q
    |||||||||| |||||||||| ||||| || | ||||| ||||||| | |  ||||||  |||||| |||  |||||| || | |||||  |||||||||    
T  42467314 aaaaacaatagagagagaaaaatgaagagagagagtaaaaatataatgtgagtatgagggagaaagctgtctaaaaattattaaaaaatggttgtacaaa 42467215  T
Q  192 tatcatttct 201  Q
    ||||||||||    
T  42467214 tatcatttct 42467205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 201
Target Start/End: Original strand, 49025344 - 49025373
Alignment:
Q  172 tcataaaataattgtacaaatatcatttct 201  Q
    ||||||||||||||||||||||||||||||    
T  49025344 tcataaaataattgtacaaatatcatttct 49025373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 201
Target Start/End: Original strand, 49167888 - 49167925
Alignment:
Q  164 aaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  49167888 aaaaattatcacaaaataattgtacaaatatcatttct 49167925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 2300138 - 2300082
Alignment:
Q  144 tatgagaaagaaagttgta-caaaaatgatcataaaataattgtacaaatatcattt 199  Q
    ||||||| ||||||||||| |||||||  |||||||||| |||| ||||||||||||    
T  2300138 tatgagatagaaagttgtaacaaaaattgtcataaaatagttgttcaaatatcattt 2300082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 17500814 - 17500698
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||  |||||||||| ||||| || | | ||||||||||| | |  ||||||| | ||||||||  |||| | || ||||| |  ||    
T  17500814 attggtccaaaacaatggagagagaaaaatgaagagagagaataagaatataatgtgagtatgagagataaagttgtcaaaaagttataataaagtggtt 17500715  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  17500714 gtacaaatatcatttct 17500698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 17552400 - 17552516
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||  |||||||||| ||||| || | | ||||||||||| | |  ||||||| | ||||||||  |||| | || ||||| |  ||    
T  17552400 attggtccaaaacaatggagagagaaaaatgaagagagagaataagaatataatgtgagtatgagagataaagttgtcaaaaagttataataaagtggtt 17552499  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  17552500 gtacaaatatcatttct 17552516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 21153108 - 21153052
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttc 200  Q
    |||||| |||||||||||  |||||| || | ||||| |||||||||||||||||||    
T  21153108 tatgaggaagaaagttgtcaaaaaattattagaaaatgattgtacaaatatcatttc 21153052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 1295449 - 1295333
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||| ||||||||||  |||  || | ||||||||||||| | |  ||||||| | |||||||| ||||| | |||| |||||| ||    
T  1295449 attggtcaaaaacaatagagagagaaaaaggaacagagagagtaagaatataatgtgagtatgagagaaaaagttgtccaaaagttatcacaaaatagtt 1295350  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  1295349 gtacaaatatcatttct 1295333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 20549339 - 20549455
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||| ||||||||||   ||| || | | |||||| |||| | | |||||||| |||| ||| ||||||||| |||||||||||  |    
T  20549339 attggtcaaaaacaatagagagagaaaaagaaagagagagaataagaagataatgtgaatatgagagagaatgttatacaaaaattatcataaaatagat 20549438  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  20549439 gtacaaatatcatttct 20549455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 41717380 - 41717264
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  || | || | ||||||||||||||| |  ||||||| ||||||||||  |||| |  |||  ||||||||    
T  41717380 attggtcaaaaacaatggagagagaaaaaggaggcgagagagtaagaatataacgtgagtatgagatagaaagttgtttaaaagttgtcactaaataatt 41717281  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  41717280 gtacaaatatcatttct 41717264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 37585548 - 37585431
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagtt-gtacaaaaatgatcataaaataat 183  Q
    ||||||||||||||||||||||||||||  |||| || | | |||||| |||| | |  ||||||| |||| ||| ||||||||||  ||||||||||      
T  37585548 attggtcaaaaacaataaagagagaaaaaagaagagagagaataagaagataatgtgagtatgagagagaatgttagtacaaaaattgtcataaaataga 37585449  T
Q  184 tgtacaaatatcatttct 201  Q
    ||||||||||| ||||||    
T  37585448 tgtacaaatataatttct 37585431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 7168 - 7284
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || |   ||||||||||| | |  ||||||| |||||||||| ||||| |  ||| ||||| |||    
T  7168 attggtcaaaaacaatggagagagaaaaaggaagagagaggataagaatataatgtgagtatgagagagaaagttgtccaaaagttgtcagaaaatgatt 7267  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  7268 gtacaaatatcatttct 7284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 36869791 - 36869907
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || | ||||||||||||| | |  ||||||| ||||||||||  |||| |  ||| |||||  ||    
T  36869791 attggtcaaaaacaatggagagagaaaaaggaagagagagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaatggtt 36869890  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  36869891 gtacaaatatcatttct 36869907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 20096432 - 20096490
Alignment:
Q  143 atatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||| ||||||||||  ||| || |||||||||||||| ||||||||||||||||    
T  20096432 atatgagagagaaagttgtcaaaatattatcataaaataattatacaaatatcatttct 20096490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 1834623 - 1834539
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaat 169  Q
    ||||||||||||||||| ||||||||||  |||| || | | ||||||||||| | |  ||||||| |||||||||| |||||||    
T  1834623 attggtcaaaaacaatagagagagaaaaaggaagagagagaataagaatataatgtgagtatgagagagaaagttgttcaaaaat 1834539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 1901880 - 1901996
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || | ||||||||||||| | |  ||||||| ||||||||||  |||| |  ||| ||| |  ||    
T  1901880 attggtcaaaaacaatggagagagaaaaaggaagagagagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggtt 1901979  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  1901980 gtacaaatatcatttct 1901996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 1911326 - 1911442
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || | ||||||||||||| | |  ||||||| ||||||||||  |||| |  ||| ||| |  ||    
T  1911326 attggtcaaaaacaatggagagagaaaaaggaagagagagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggtt 1911425  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  1911426 gtacaaatatcatttct 1911442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 4189790 - 4189738
Alignment:
Q  149 gaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||| |||| ||||||| |||| ||||||||| ||||||||||||||||    
T  4189790 gaaagaaaattgttcaaaaattatcacaaaataattctacaaatatcatttct 4189738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 8868989 - 8868873
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||| |||||||||||  ||||||||||  |||| |||| ||||||||||||| | |  ||||||| ||||||||||   ||| |  ||| ||||  |||    
T  8868989 attgttcaaaaacaatggagagagaaaaaagaagagaaagagtaagaatataatgtgagtatgagagagaaagttgtctgaaagttgtcaaaaaaagatt 8868890  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  8868889 gtacaaatatcatttct 8868873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 28300403 - 28300287
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataa--cgagtatatgagaaagaaagttgtacaaaaatgatcataaaataa 182  Q
    ||||||| ||||||||| |||||||||| ||||| || | | |||||||||||   |||||||  ||||  ||||||||  |||||| || |||||||      
T  28300403 attggtccaaaacaatagagagagaaaaatgaagagagagaataagaatataatttgagtataaaagaa--aaagttgtcaaaaaattataataaaatgg 28300306  T
Q  183 ttgtacaaatatcatttct 201  Q
    |||||||||||||||||||    
T  28300305 ttgtacaaatatcatttct 28300287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 35376505 - 35376621
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  |||||||||| ||||   | | |||||||||||||   |  ||||||| ||||||||||  ||||||  ||| |||||  ||    
T  35376505 attggtcaaaaacaatggagagagaaaaatgaaaaaagagagtaagaatataatatgagtatgagagagaaagttgtctaaaaattgtcacaaaatggtt 35376604  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  35376605 gtacaaatatcatttct 35376621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 37754504 - 37754448
Alignment:
Q  145 atgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||| |||||||||| ||||||| || ||||||||  ||||||||||||||||||    
T  37754504 atgagagagaaagttgtccaaaaattattataaaatagatgtacaaatatcatttct 37754448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 40785653 - 40785729
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgt 161  Q
    ||||||||||||||||  |||||||||| ||| | || ||||||||||||||| | |  ||||||| ||||||||||    
T  40785653 attggtcaaaaacaatggagagagaaaaatgatgagagatagtaagaatataatgtgagtatgagagagaaagttgt 40785729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 37134602 - 37134681
Alignment:
Q  127 taagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttctaaaaa 206  Q
    |||||||||||   | |||||| | ||||||||||  ||||||  |||||||||| ||||||||||||||||||| ||||    
T  37134602 taagaatataatatgaatatgaaagagaaagttgttaaaaaattgtcataaaatagttgtacaaatatcatttctcaaaa 37134681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 50745666 - 50745579
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgat 172  Q
    ||||||||||||||||  ||||||||||  |||| || | | |||||| |||| | |  ||||||| |||||||||||||||||||||    
T  50745666 attggtcaaaaacaatggagagagaaaaaggaagagagagaataagaagataatgtgagtatgagagagaaagttgtacaaaaatgat 50745579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 167
Target Start/End: Complemental strand, 16295581 - 16295499
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaa 167  Q
    ||||||||||||||||| ||||||||||  |||| || | | ||| ||||||| | |  ||||||| ||||||||||||||||    
T  16295581 attggtcaaaaacaatagagagagaaaaaggaagagagaaaataaaaatataatgtgagtatgagagagaaagttgtacaaaa 16295499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 21239110 - 21239148
Alignment:
Q  163 caaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  21239110 caaaaattatcataaaatagttgtacaaatatcatttct 21239148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 28920062 - 28920120
Alignment:
Q  144 tatgagaaagaaagttgt-acaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||| |||||||| || || ||||| |||||||||||||||||||    
T  28920062 tatgagagagaaagttgtcacaaaaattattatcaaatagttgtacaaatatcatttct 28920120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 38693579 - 38693637
Alignment:
Q  143 atatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||| ||||| |||| ||||||| |||| | ||||||||| ||||||||||||||    
T  38693579 atatgagagagaaaattgtccaaaaattatcacataataattgtgcaaatatcatttct 38693637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 39901650 - 39901592
Alignment:
Q  144 tatgagaaagaaagttgtac-aaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||| | |||||| |||| ||||| ||||||||||||||||||||    
T  39901650 tatgagatagaaagttgttccaaaaattatcaaaaaatgattgtacaaatatcatttct 39901592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 40419654 - 40419712
Alignment:
Q  143 atatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||| ||||| ||||  |||||| |||| ||||| ||||||||||||||||||||    
T  40419654 atatgagagagaaaattgtctaaaaattatcacaaaatgattgtacaaatatcatttct 40419712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 48789386 - 48789328
Alignment:
Q  144 tatgagaaagaaagttgt-acaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| | |||||||| |||||||| |||| ||||||||||| ||||||||||||||    
T  48789386 tatgagataaaaagttgtcacaaaaattatcagaaaataattgttcaaatatcatttct 48789328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 52454102 - 52454164
Alignment:
Q  139 gagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||||||| ||||||||| |||||| |  ||| ||| | ||||||||||||||||||||    
T  52454102 gagtatatgagagagaaagttgaacaaaagttgtcacaaattgattgtacaaatatcatttct 52454164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 53133902 - 53134022
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataa--cgagta--tatgagaaagaaagttgtacaaaaatgatcataaaat 180  Q
    ||||||| |||||| |||||||||||||  |||||||   | |||||||||||   |||||  ||||||| ||||||||||  |||||| || |||||||    
T  53133902 attggtccaaaacactaaagagagaaaaaagaagtgagtcaataagaatataatgtgagtatgtatgagagagaaagttgttaaaaaattattataaaat 53134001  T
Q  181 aattgtacaaatatcatttct 201  Q
      || ||||||||||||||||    
T  53134002 ggttttacaaatatcatttct 53134022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 11327166 - 11327109
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||| |  ||| |||||  |||||||||||||||||||    
T  11327166 tatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttct 11327109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 13159719 - 13159662
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||| |  ||| ||| |||||||||| |||||||||||    
T  13159719 tatgagagagaaagttgtacaaaagttgtcacaaattaattgtacagatatcatttct 13159662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 16267910 - 16267967
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||| ||||||| || | ||||| ||| ||||||||||||||||    
T  16267910 tatgagagagaaagttgttcaaaaattattagaaaatgattatacaaatatcatttct 16267967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 198
Target Start/End: Original strand, 25959496 - 25959609
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || ||||||| ||||||| | |  ||||||| ||||||||||  |||| | |||| ||| |  ||    
T  25959496 attggtcaaaaacaatggagagagaaaaaggaagagagatagtaaaaatataatgtgagtatgagagagaaagttgtctaaaagttatcacaaagtggtt 25959595  T
Q  185 gtacaaatatcatt 198  Q
    || |||||||||||    
T  25959596 gtccaaatatcatt 25959609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 31206864 - 31206921
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||||||||||||||  |||| |  ||| ||||| ||||||||||||||||||||    
T  31206864 tatgagaaagaaagttgtcaaaaatttgtcacaaaatgattgtacaaatatcatttct 31206921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 34021476 - 34021533
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||||||||||||| |||||| |  ||| ||| | ||||||||||||||||||||    
T  34021476 tatgagaaagaaagttggacaaaagttgtcacaaattgattgtacaaatatcatttct 34021533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 44027143 - 44027199
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||  |||||| || |||||||| |||||||||||||||||||    
T  44027143 tatgagagagaaagttgtcaaaaaat-attataaaatagttgtacaaatatcatttct 44027199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 47141613 - 47141670
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||||| ||   |||||  |||||||||||||||||||    
T  47141613 tatgagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttct 47141670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 48205103 - 48205046
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||| |||||||||||| ||   ||||| ||||||||||||||||||||    
T  48205103 tatgagagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcatttct 48205046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 52100311 - 52100262
Alignment:
Q  152 agaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||||||||||||| || | |||||  |||||||||||||||||||    
T  52100311 agaaagttgtacaaaaattattaaaaaatggttgtacaaatatcatttct 52100262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 52727469 - 52727518
Alignment:
Q  152 agaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||||||  |||||| |||||||| | ||||||||||||||||||||    
T  52727469 agaaagttgtcaaaaaattatcataaagtgattgtacaaatatcatttct 52727518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 7867705 - 7867781
Alignment:
Q  125 agtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||||||||| | |  ||||||||||||| ||||  |||| |  ||| |||||| |||||||||||||||||||    
T  7867705 agtaagaatataatgtgagtatgagaaagaaaattgtttaaaagttgtcacaaaatagttgtacaaatatcatttct 7867781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 16139291 - 16139363
Alignment:
Q  127 taagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    ||||||||||| | || ||||||| ||||| |||| ||||| | ||||||||||  |||||||||||| ||||    
T  16139291 taagaatataatgtgtttatgagagagaaaattgttcaaaagttatcataaaatggttgtacaaatattattt 16139363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 35368728 - 35368644
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaat 169  Q
    |||||| |||||||||| ||||||||||  |||| || | | |||||| |||| | |  ||||||| ||||||||||||||||||    
T  35368728 attggtaaaaaacaatagagagagaaaaaggaagagagagaataagaagataatgtgagtatgagagagaaagttgtacaaaaat 35368644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 197
Target Start/End: Complemental strand, 37710521 - 37710409
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||||||||| |||| ||||||||||  |||| || |||||||||| |||| | |  ||||||| ||||  |||| ||||| |  ||| | ||| |||    
T  37710521 attggtcaaaaataatagagagagaaaaaggaagagagatagtaagaagataatgtgagtatgagagagaatcttgttcaaaagttgtcacagaatgatt 37710422  T
Q  185 gtacaaatatcat 197  Q
    |||||||||||||    
T  37710421 gtacaaatatcat 37710409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 38363235 - 38363291
Alignment:
Q  146 tgagaaagaaagttgt-acaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||||||| |||| | |||||| || | ||||||||||||||||||||||||||    
T  38363235 tgagaaagaaaattgtcataaaaattattaaaaaataattgtacaaatatcatttct 38363291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 45517611 - 45517727
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||||||||||| |  ||||||||||  |||| || | | |||||| |||| | | |||||| |||||||||| ||||||| | ||   |||||  ||    
T  45517611 attggtcaaaaacattggagagagaaaaaggaagagagagaataagaagataatgtgaatatgaaaaagaaagttatacaaaagttatacaaaaatggtt 45517710  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  45517711 gtacaaatatcatttct 45517727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 48789661 - 48789613
Alignment:
Q  154 aaagttgt-acaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||| |||||||| |||| ||||||||||| ||||||||||||||    
T  48789661 aaagttgtcacaaaaattatcagaaaataattgttcaaatatcatttct 48789613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 49130967 - 49130855
Alignment:
Q  89 gtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgtac 188  Q
    ||||||||||||  ||||||||||  |||| || | | ||||| ||||| | |  ||||| | |||| |||||  ||||||  ||||||||||| |||||    
T  49130967 gtcaaaaacaatggagagagaaaaaggaagagagagaataagagtataatgtgagtatgaaagagaaggttgtcaaaaaattgtcataaaataaatgtac 49130868  T
Q  189 aaatatcatttct 201  Q
    |||||||||||||    
T  49130867 aaatatcatttct 49130855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 51672980 - 51672864
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || | | ||| ||||||| | |  ||||| ||||||||||||  |||| | |||| ||| ||  |    
T  51672980 attggtcaaaaacaatggagagagaaaaaggaagagagagaataaaaatataatgtgagtatgaaaaagaaagttgtcaaaaagttatcacaaagtagat 51672881  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  51672880 gtacaaatatcatttct 51672864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 53473667 - 53473611
Alignment:
Q  145 atgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||| | |||||||||||||| | |||| ||| | ||||||||||||||||||||    
T  53473667 atgagagaaaaagttgtacaaaagttatcacaaattgattgtacaaatatcatttct 53473611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 27352747 - 27352631
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || | ||||||||||||| | |  ||||||| |||||||||| ||||| | |||| |||||  ||    
T  27352747 attggtcaaaaacaatggagagagaaaaaggaagagagagagtaagaatataatgtgagtatgagagagaaagttgtccaaaagttatcacaaaatggtt 27352648  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  27352647 gtacaaatatcatttct 27352631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 34941874 - 34941990
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  |||||||||| ||||  || ||||||||||||||| | |  ||||||| ||||||||||  ||||||  ||| ||||| ||     
T  34941874 attggtcaaaaacaatggagagagaaaaatgaaaagagatagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaaatgata 34941973  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  34941974 gtacaaatatcatttct 34941990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 44723438 - 44723363
Alignment:
Q  125 agtaagaatataacgagtatatgagaaagaaagttgt-acaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    ||||| ||||||||| | |||||||| |||||||||| |||||||| || ||||||||| ||||||||||||||||    
T  44723438 agtaaaaatataacgtgaatatgagagagaaagttgtcacaaaaattattataaaataaatgtacaaatatcattt 44723363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 50460666 - 50460751
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatg 170  Q
    ||||||||||||||||| ||||||||||  |||| || | | |||||| |||| | |  |||||||||||||||||||||||||||    
T  50460666 attggtcaaaaacaatagagagagaaaaaggaagagagagaataagaagataatgtgagtatgagaaagaaagttgtacaaaaatg 50460751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 587012 - 586900
Alignment:
Q  89 gtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgtac 188  Q
    |||||||||||| || |||||||| ||||| || | ||||||||||||| |    ||||||| | ||||||||  |||||| |||| ||| | |||||||    
T  587012 gtcaaaaacaatgaaaagagaaaaatgaagagagagagtaagaatataatgtaagtatgagagaaaaagttgtctaaaaattatcacaaagtgattgtac 586913  T
Q  189 aaatatcatttct 201  Q
    |||||||||||||    
T  586912 aaatatcatttct 586900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 14002696 - 14002811
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||| ||||| |||  |||||||||| | ||| || | ||||||||||||| |   |||||||||||||||||||| |||||| |||| ||||   ||    
T  14002696 attggttaaaaataatggagagagaaaaattaagagagagagtaagaatataatgtaaatatgagaaagaaagttgtataaaaattatca-aaaaaggtt 14002794  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  14002795 gtacaaatatcatttct 14002811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 41885838 - 41885722
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||   ||| || | | ||||||||||| | |  |||||||  |||| ||||| |||||  |||| |||||||||    
T  41885838 attggtcaaaaacaatggagagagaaaaagaaagagagagaataagaatataatgtgagtatgagagtgaaaattgtataaaaactatcacaaaataatt 41885739  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  41885738 gtacaaatatcatttct 41885722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 51168722 - 51168838
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||| |||||||||  ||||||||||  |||| || | ||||||||||||| | | |||||||| | ||||||||  |||| | |||| ||||| |||    
T  51168722 attggttaaaaacaatggagagagaaaaaagaagagagagagtaagaatataatgtgaatatgagagaaaaagttgtctaaaagttatcacaaaatgatt 51168821  T
Q  185 gtacaaatatcatttct 201  Q
    |||||| ||||||||||    
T  51168822 gtacaagtatcatttct 51168838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 34157858 - 34157807
Alignment:
Q  150 aaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||||||| ||||||| |||| ||||||||| ||||||||||||||||    
T  34157858 aaagaaagttgtccaaaaattatcacaaaataattatacaaatatcatttct 34157807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 3919415 - 3919296
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||||||||||||||  |||| |||| | ||| || | | ||||||||||| | |  ||||||| |||||||||| ||||||| || | |||||  ||    
T  3919415 attggtcaaaaacaata--gagaaaaaaataaagagagagaataagaatataatgcgagtatgagagagaaagttgtccaaaaattataacaaaatggtt 3919318  T
Q  185 gtacaaatatcatttctaaaaa 206  Q
    ||||||||||||||||| ||||    
T  3919317 gtacaaatatcatttctcaaaa 3919296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 48576459 - 48576573
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||| ||||||||||  ||||||| | | ||||||||||| | | |||||||| |||||||| |  |||| |  |||||||||  ||    
T  48576459 attggtccaaaacaatatagagagaaaaaagaagtgagagaataagaatataatgcgaatatgagagagaaagttatcaaaaagttgtcataaaatggtt 48576558  T
Q  185 gtacaaatatcattt 199  Q
     ||||||||||||||    
T  48576559 atacaaatatcattt 48576573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 5043169 - 5043096
Alignment:
Q  125 agtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatt 198  Q
    ||||||||||||| | | |||||| | |||||||| |  |||||| |||| |||||||||||||||||||||||    
T  5043169 agtaagaatataatgtgaatatgaaagagaaagttatttaaaaattatcacaaaataattgtacaaatatcatt 5043096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 7371961 - 7372018
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||| ||||||||||||  ||||||| || |||||||||||||||||||    
T  7371961 tatgagagagaaaattgtacaaaaattgtcataaattagttgtacaaatatcatttct 7372018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 11068542 - 11068425
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||| |||||||||| |||||  | | | ||||||||||| | | | |||||| ||||||||||  ||||||  | ||||| |  ||    
T  11068542 attggtctaaaacaatagagagagaaaaatgaagaaagagaataagaatataatgtgaacatgagagagaaagttgtcaaaaaattgtaataaagtggtt 11068443  T
Q  185 gtacaaatatcatttcta 202  Q
    ||||||||||||||||||    
T  11068442 gtacaaatatcatttcta 11068425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 26585186 - 26585243
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| | |||||||||||||| | |||| |||||| |||||||||||||||||||    
T  26585186 tatgagagaaaaagttgtacaaaagttatcacaaaatagttgtacaaatatcatttct 26585243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 30547413 - 30547356
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||| |||||| |||||||| | || |||||||||||||||||    
T  30547413 tatgagagagaaagttgtataaaaattatcataaattgatcgtacaaatatcatttct 30547356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 36669383 - 36669440
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| | |||||||||||||||| |||| ||| | ||||||||||||||||||||    
T  36669383 tatgagagaaaaagttgtacaaaaattatcacaaattgattgtacaaatatcatttct 36669440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 49699769 - 49699822
Alignment:
Q  148 agaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||||||||||  |||||| ||||||||||  |||||||||||||||||||    
T  49699769 agaaagaaagttgttaaaaaattatcataaaatggttgtacaaatatcatttct 49699822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 8577456 - 8577572
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  |||||||||| ||||| || | | |||||| |||| |   |||||||| |||| ||||||||||| | ||   |||||  ||    
T  8577456 attggtcaaaaacaatggagagagaaaaatgaagagagagaataagaagataatgtaaatatgagagagaaggttgtacaaaagttatacaaaaatggtt 8577555  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  8577556 gtacaaatatcatttct 8577572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 23554868 - 23554752
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||| |||||||||  ||||||||||  |||| || | | ||||||||||| | |  ||||||| | ||||||||  |||||| |||| |||||  ||    
T  23554868 attggttaaaaacaatggagagagaaaaaggaagagagagaataagaatataatgtgagtatgagagataaagttgtttaaaaattatcaaaaaatggtt 23554769  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  23554768 gtacaaatatcatttct 23554752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 31974775 - 31974723
Alignment:
Q  148 agaaagaaagttgt-acaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    |||||||||||||| | |||||| |||| ||||||||||||||||||||||||    
T  31974775 agaaagaaagttgtcataaaaattatcaaaaaataattgtacaaatatcattt 31974723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 40238555 - 40238439
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||||||||| |||  ||||||||||  |||| || | ||||||||||||| | | |||||||| | ||| ||||  |||| |  ||| ||||| |||    
T  40238555 attggtcaaaaataatggagagagaaaaaagaagagagaaagtaagaatataatgtgaatatgagagaaaaaattgtttaaaagttgtcaaaaaatgatt 40238456  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  40238455 gtacaaatatcatttct 40238439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 43105222 - 43105106
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||||||||| |||  |||||||||| ||||| || | | |||||| ||||   |  ||||||| ||||| ||||| |||||| ||   |||||||||    
T  43105222 attggtcaaaaataatggagagagaaaaatgaagagagagaataagaagataatatgagtatgagagagaaaattgtataaaaattatacaaaaataatt 43105123  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  43105122 gtacaaatatcatttct 43105106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 45863739 - 45863791
Alignment:
Q  150 aaagaaagttgt-acaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||| |||||||| |||| ||||||||||||||||||||||||||    
T  45863739 aaagaaaattgtcacaaaaattatcaaaaaataattgtacaaatatcatttct 45863791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 835929 - 835874
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    ||||||| ||||||||||||||||||  | | ||||| ||||||||||||||||||    
T  835929 tatgagagagaaagttgtacaaaaattgtaacaaaatgattgtacaaatatcattt 835874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 12489535 - 12489654
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||| ||||||||||  |||| || | | ||||||||||| | | |||||||| ||||||||||  ||||||  | | |||| |  |    
T  12489535 attggtccaaaacaatagagagagaaaaaagaagagataaattaagaatataatgtgaatatgagagagaaagttgtcaaaaaattgttaaaaaacagat 12489634  T
Q  185 gtacaaatatcatttctaaa 204  Q
    ||||| ||||||||||||||    
T  12489635 gtacatatatcatttctaaa 12489654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 167
Target Start/End: Complemental strand, 578921 - 578839
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaa 167  Q
    ||||||||||||||||| |||||||||| ||||| || | | ||||||| |||   | |||||||| |||||||||| |||||    
T  578921 attggtcaaaaacaatagagagagaaaaatgaagagagagaataagaatgtaatatgaatatgagagagaaagttgtccaaaa 578839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 1689450 - 1689392
Alignment:
Q  144 tatgagaaagaaagttgt-acaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||| ||||||||  | |||||||| |||||||||||||||||||    
T  1689450 tatgagagagaaagttgtcacaaaaattgttataaaatagttgtacaaatatcatttct 1689392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 25994942 - 25994984
Alignment:
Q  157 gttgtacaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||    
T  25994942 gttgtccaaaaattatcacaaaataattgtacaaatatcattt 25994984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 25995518 - 25995456
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttctaaaaa 206  Q
    ||||||| |||||||||||||||| |  ||| ||| | |||||||||||||||||||| ||||    
T  25995518 tatgagagagaaagttgtacaaaacttgtcacaaattgattgtacaaatatcatttctcaaaa 25995456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 26101433 - 26101395
Alignment:
Q  163 caaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||| ||||||||||||||||||||||||||    
T  26101433 caaaaattatcacaaaataattgtacaaatatcatttct 26101395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 26547293 - 26547235
Alignment:
Q  143 atatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||| |||||||||| |||||||  ||| ||||||  ||||||||||||||||||    
T  26547293 atatgagagagaaagttgttcaaaaattgtcacaaaatatatgtacaaatatcatttct 26547235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 46281495 - 46281437
Alignment:
Q  144 tatgagaaagaaagttgt-acaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||| |||||||| || | |||||| |||||||||||||||||||    
T  46281495 tatgagagagaaagttgtcacaaaaattattacaaaatagttgtacaaatatcatttct 46281437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 18610831 - 18610774
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||| |||| |  ||| |||||| |||||||||||||||||||    
T  18610831 tatgagagagaaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttct 18610774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 22674770 - 22674713
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||||||||||  |   |||||| |||||||||||||||||||    
T  22674770 tatgagagagaaagttgtacaaaaattgtacaaaaatagttgtacaaatatcatttct 22674713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 26839432 - 26839383
Alignment:
Q  152 agaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||||||||||| | ||||||||||  ||||||||||| |||||||    
T  26839432 agaaagttgtacaaaagttatcataaaatggttgtacaaataccatttct 26839383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 29489372 - 29489429
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||| ||| | |||| |||||  |||||||||||||||||||    
T  29489372 tatgagagagaaagttgtaccaaagttatcacaaaatggttgtacaaatatcatttct 29489429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 30414981 - 30414896
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatg 170  Q
    ||||||||||||||||| ||||||||||  |||| || | | |||||| |||| | |  ||||||| |||| ||||||||||||||    
T  30414981 attggtcaaaaacaatagagagagaaaaaggaagagagaaaataagaagataatgtgagtatgagagagaaggttgtacaaaaatg 30414896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 35846890 - 35846947
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||  |||| | |||| |||||||| |||||||||||||||||    
T  35846890 tatgagatagaaagttgtctaaaatttatcaaaaaataatagtacaaatatcatttct 35846947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 40118728 - 40118785
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||| |||||||||||| ||   ||||| ||||||||||||||||||||    
T  40118728 tatgagagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcatttct 40118785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 201
Target Start/End: Original strand, 45350128 - 45350165
Alignment:
Q  164 aaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  45350128 aaaaattatcacaaaataattgtacaaatatcatttct 45350165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 198
Target Start/End: Complemental strand, 48325339 - 48325226
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || | ||||| ||||||| | |  ||||||| ||||| || |  ||||||  | | |||||||||    
T  48325339 attggtcaaaaacaatggagagagaaaaaggaagagagagagtaaaaatataatgtgagtatgagagagaaaattatctaaaaattgttaaaaaataatt 48325240  T
Q  185 gtacaaatatcatt 198  Q
    ||||||||||||||    
T  48325239 gtacaaatatcatt 48325226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 30530528 - 30530644
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  |||||||||| ||||| || | | ||| ||||||| | |  ||||||| ||||||||||  |||| |  ||| |||||  ||    
T  30530528 attggtcaaaaacaatggagagagaaaaatgaagagagagaataaaaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaaatggtt 30530627  T
Q  185 gtacaaatatcatttct 201  Q
    ||| |||||||||||||    
T  30530628 gtataaatatcatttct 30530644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 32939240 - 32939292
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataa 137  Q
    ||||||||||||||||| |||||||||| ||||| |||  ||||| |||||||    
T  32939240 attggtcaaaaacaatagagagagaaaaatgaagagaaggagtaaaaatataa 32939292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 40596008 - 40596084
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgt 161  Q
    ||||||||||||||||  ||||||||||  |||| || | ||||||||||||| | |  ||||||| ||||||||||    
T  40596008 attggtcaaaaacaatggagagagaaaaaggaagagagagagtaagaatataatgtgagtatgagagagaaagttgt 40596084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 40610346 - 40610230
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || | | ||||| ||||| | |  ||||||| |||| |||||  ||||||  ||||||||| | |    
T  40610346 attggtcaaaaacaatggagagagaaaaaggaagagagagaataagagtataatgtgagtatgagagagaaggttgtcaaaaaattgtcataaaatgaat 40610247  T
Q  185 gtacaaatatcatttct 201  Q
    ||| |||||||||||||    
T  40610246 gtataaatatcatttct 40610230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 44112571 - 44112455
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||| ||||||||||  |||| || | | ||| ||||||| | |  ||||||| ||||||||||  ||||||  | ||||| |  ||    
T  44112571 attggtccaaaacaatagagagagaaaaaggaagagagagaataaaaatataatgtgagtatgagagagaaagttgtcaaaaaattgtaataaagtggtt 44112472  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  44112471 gtacaaatatcatttct 44112455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 29803340 - 29803226
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||| ||||||||||  |||| || |  |||||||||||| | | |||||||| ||||||||||  |||| |  ||| |||||| ||    
T  29803340 attggtcaaaaacaatagagagagaaaaaagaagagaga--gtaagaatataatgtgaatatgagagagaaagttgtttaaaagttgtcaaaaaatagtt 29803243  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  29803242 gtacaaatatcatttct 29803226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 27005502 - 27005549
Alignment:
Q  154 aaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||    
T  27005502 aaagttgtacaaaaattatcaaaaaataattgtacaaatatcatttct 27005549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 3154656 - 3154710
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatt 198  Q
    ||||||| |||||||||||||||| | ||||||||||| ||||||||||||||||    
T  3154656 tatgagagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcatt 3154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 25345455 - 25345341
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||||||||||||||  |||| || ||  |||||  || | | | ||  |||| | |||||| ||||||||| |||||||| |||||    
T  25345455 attggtcaaaaacaataaagagagaaaaaggaagagagatgataagaccatcatgtgaat--gagagataaagttatacaaaaattatcataaattaatt 25345358  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  25345357 gtacaaatatcatttct 25345341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 27340986 - 27340870
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||| ||||||||||  |||| || | | ||||||||||| | |  ||||||| ||||| ||||  |||||| || ||||| | |||    
T  27340986 attggtccaaaacaatagagagagaaaaaggaagagagagaataagaatataatgtgagtatgagagagaaaattgtcaaaaaattataataaagtgatt 27340887  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  27340886 gtacaaatatcatttct 27340870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 31626030 - 31626146
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||||||||| |||| |||||||||| || || || | | ||| ||||||| | |  ||||||| | |||||||||||||||| ||   ||||| |||    
T  31626030 attggtcaaaaaaaatagagagagaaaaatgtagagagagaataaaaatataatgtgagtatgagataaaaagttgtacaaaaattataccaaaatgatt 31626129  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  31626130 gtacaaatatcatttct 31626146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 167
Target Start/End: Complemental strand, 91332 - 91250
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaa 167  Q
    |||||||||||||||| |||||||||||  |||| || | ||||||||||||| | |  ||||||| |||||||||| |||||    
T  91332 attggtcaaaaacaatgaagagagaaaaaggaagagagagagtaagaatataatgtgagtatgagagagaaagttgtccaaaa 91250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 6538929 - 6538871
Alignment:
Q  143 atatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||| | ||||||||||  |||||| |||| ||||||||||||||||||||||||||    
T  6538929 atatgaaagagaaagttgtcaaaaaattatcacaaaataattgtacaaatatcatttct 6538871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 11415963 - 11415909
Alignment:
Q  147 gagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||| |||||||||||||||||| ||| ||||||||||||| ||||||| |||||    
T  11415963 gagatagaaagttgtacaaaaattatcttaaaataattgtagaaatatcgtttct 11415909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 17489465 - 17489351
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  |||||||||| | ||| || ||| ||||||| | | | |  ||||||| ||||| ||||  |||||| |||| |||||| ||    
T  17489465 attggtcaaaaacaatggagagagaaaaattaagagagataataagaatgtcatgtgagtatgagagagaaaattgtgtaaaaattatcaaaaaatagtt 17489366  T
Q  185 gtacaaatatcattt 199  Q
    |||||||||||||||    
T  17489365 gtacaaatatcattt 17489351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 19983898 - 19983842
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||| ||||||| |||| || ||||||||||||||||||||||||||||||    
T  19983898 tatgagagagatagttgtaaaaaattg-tcataaaataattgtacaaatatcatttct 19983842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 26686959 - 26686882
Alignment:
Q  125 agtaagaatataacgagtatatgagaaagaaagttgt-acaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||| ||||||| | | |||||||| |||||||||| |||||||| || | |||||||||||| |||||||||||||    
T  26686959 agtaaaaatataatgtgaatatgagagagaaagttgtcacaaaaattattaaaaaataattgtataaatatcatttct 26686882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 26956690 - 26956613
Alignment:
Q  125 agtaagaatataacgagtatatgagaaagaaagttgt-acaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||| ||||||| | | |||||||| |||||||||| |||||||| || | |||||||||||| |||||||||||||    
T  26956690 agtaaaaatataatgtgaatatgagagagaaagttgtcacaaaaattattaaaaaataattgtataaatatcatttct 26956613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 35814511 - 35814454
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||||||||||||||| ||| | |||| |||||  |||||||||||||||||||    
T  35814511 tatgagaaagaaagttgtaccaaagttatcacaaaatggttgtacaaatatcatttct 35814454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 38075703 - 38075756
Alignment:
Q  148 agaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||||||||||  |||||| ||||||||||| ||||||||||||| |||||    
T  38075703 agaaagaaagttgtctaaaaattatcataaaatagttgtacaaatatcttttct 38075756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 2456143 - 2456027
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||| ||||||||||   |||||| | | ||||||||||| | |  ||||||| ||||||||||  ||||||  | |||||||| ||    
T  2456143 attggtccaaaacaatagagagagaaaaaaaaagtgagagaataagaatataatgtgagtatgagatagaaagttgtcaaaaaattgttataaaatagtt 2456044  T
Q  185 gtacaaatatcatttct 201  Q
    ||| | |||||||||||    
T  2456043 gtatagatatcatttct 2456027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 11880941 - 11881057
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  | ||||||||  |||| || | |||||||| |||| | |  ||||||| ||||||||||  |||| |  | | |||||||||    
T  11880941 attggtcaaaaacaatggaaagagaaaaaggaagagagagagtaagaagataatgtgagtatgagagagaaagttgtctaaaagttgttaaaaaataatt 11881040  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  11881041 gtacaaatatcatttct 11881057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 19437374 - 19437258
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||| ||||||||||   ||| || | ||| ||||||||| | | |||||||| ||||||||||  |||  | |||| |||||  ||    
T  19437374 attggtcaaaaacaatagagagagaaaaagtaagagagagagtcagaatataatgtgaatatgagagagaaagttgtttaaaggttatcacaaaatggtt 19437275  T
Q  185 gtacaaatatcatttct 201  Q
    |||||| ||||||||||    
T  19437274 gtacaagtatcatttct 19437258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 34400734 - 34400619
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| | || | || |||||||| | |  ||||||| |||| |||||  ||||||  ||||||||| |||    
T  34400734 attggtcaaaaacaatggagagagaaaaaagaagaggaacaata-gaatataatgtgagtatgagagagaaggttgttaaaaaattgtcataaaatgatt 34400636  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  34400635 gtacaaatatcatttct 34400619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 6940162 - 6940229
Alignment:
Q  144 tatgagaaagaaagttgt-acaaaaatgatcataaaataattgtacaaatatcatttctaaaaagaaa 210  Q
    ||||||| |||||||||| |||||||| || |||||||  |||||||||||||||||||  |||||||    
T  6940162 tatgagagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctctaaagaaa 6940229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 30103463 - 30103522
Alignment:
Q  143 atatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttcta 202  Q
    |||||||| ||||| |||||||||||| ||   ||||| |||||||||||||||||||||    
T  30103463 atatgagagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcatttcta 30103522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 191
Target Start/End: Complemental strand, 28501734 - 28501628
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || ||  |||||| || | | | |||||||| ||||||||||||||||||  ||| |||||  ||    
T  28501734 attggtcaaaaacaatggagagagaaaagggaagagagatgataagaacatcatgtgaatatgagagagaaagttgtacaaaaattgtcacaaaatggtt 28501635  T
Q  185 gtacaaa 191  Q
    |||||||    
T  28501634 gtacaaa 28501628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 4954524 - 4954467
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||||| || |  ||| ||| ||||||||||||||||||||||    
T  4954524 tatgagagagaaagttgtacataagttgtcacaaattaattgtacaaatatcatttct 4954467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 6529136 - 6529015
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||| ||||   ||| || | | ||||| ||||||| |  ||||||| | ||||||||  ||||||  | | |||||||||    
T  6529136 attggtcaaaaacaatggagagaaaaaaagaaagagagagaataagagtataacgtgagtatgagagaaaaagttgtcaaaaaattgttagaaaataatt 6529037  T
Q  185 gtacaaatatcatttctaaaaa 206  Q
    ||||||||||||||||| ||||    
T  6529036 gtacaaatatcatttctcaaaa 6529015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 7144635 - 7144578
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||  |||| | ||||||||||  |||||||||||||||||||    
T  7144635 tatgagagagaaagttgtttaaaagttatcataaaatggttgtacaaatatcatttct 7144578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 20985542 - 20985599
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||||| ||   |||||  |||||||||||||||||||    
T  20985542 tatgagagagaaagttgtacaaaaattatacaaaaatggttgtacaaatatcatttct 20985599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 30420684 - 30420627
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||  |||||||||||| ||||||||||   ||||||||||||||||||    
T  30420684 tatgagagagaagattgtacaaaaattatcataaaatggatgtacaaatatcatttct 30420627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 35464604 - 35464653
Alignment:
Q  152 agaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||| |||| ||||||| |||| |||||||| |||||||||||||||||    
T  35464604 agaaaattgttcaaaaattatcaaaaaataatcgtacaaatatcatttct 35464653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 38010930 - 38010873
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||| |||||||||| | |||| ||| | ||||||||||||||||||||    
T  38010930 tatgagagagaaaattgtacaaaagttatcacaaattgattgtacaaatatcatttct 38010873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 3723030 - 3723146
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||  |||||||||| ||||| || | | ||| ||||||| |   |||||||| ||||||||||  ||| ||  | ||||| || ||    
T  3723030 attggtccaaaacaatggagagagaaaaatgaagagagagaataaaaatataatgtagatatgagagagaaagttgtcaaaagattgtaataaagtagtt 3723129  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  3723130 gtacaaatatcatttct 3723146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 5698282 - 5698398
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  |||||||||| ||| | || | ||||| ||||||| | |  |||||||||||||||| |  |||| | || | |||||  ||    
T  5698282 attggtcaaaaacaatggagagagaaaaatgatgagagagagtaaaaatataatgtgagtatgagaaagaaagttatctaaaagttattacaaaatggtt 5698381  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||| ||||||    
T  5698382 gtacaaatatgatttct 5698398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 8442276 - 8442192
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaat 169  Q
    |||||||| |||||||| ||||||||||  |||| || | | ||| || |||| | | |||||||| ||||||||||||||||||    
T  8442276 attggtcagaaacaatagagagagaaaaaagaagagagaaaataaaaagataatgtgaatatgagagagaaagttgtacaaaaat 8442192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 25255369 - 25255293
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgt 161  Q
    ||||||| ||||||||| ||||||||||  |||| || | | ||||||||||| | | |||||||| ||||||||||    
T  25255369 attggtccaaaacaatagagagagaaaaaggaagagagagattaagaatataatgtgaatatgagatagaaagttgt 25255293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 25319159 - 25319083
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgt 161  Q
    ||||||| ||||||||| ||||||||||  |||| || | | ||||||||||| | | |||||||| ||||||||||    
T  25319159 attggtccaaaacaatagagagagaaaaaggaagagagagattaagaatataatgtgaatatgagatagaaagttgt 25319083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 40566171 - 40566247
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgt 161  Q
    ||||||||||||||||  |||||||||| ||||| || | | ||||||||||| | | ||||||||  |||||||||    
T  40566171 attggtcaaaaacaatggagagagaaaaatgaagagagagaataagaatataatgtgaatatgagagtgaaagttgt 40566247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 41460233 - 41460117
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||| |||||||||  |||||||||| ||||| || | | ||||||||||| | |  ||||||| | ||||||||  |||| |  ||| ||||| |||    
T  41460233 attggttaaaaacaatggagagagaaaaatgaagagagagaataagaatataatgtgagtatgagagataaagttgtttaaaagttgtcaaaaaatgatt 41460134  T
Q  185 gtacaaatatcatttct 201  Q
    ||| |||||||||||||    
T  41460133 gtataaatatcatttct 41460117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 43153014 - 43153098
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaat 169  Q
    ||||||||||||||||  ||||||||||  |||| || | | ||| || |||| | | |||||||| ||||||||||||||||||    
T  43153014 attggtcaaaaacaatggagagagaaaaaggaagagagaaaataaaaagataatgtgaatatgagagagaaagttgtacaaaaat 43153098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 16743220 - 16743336
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || | ||||||||||||| | |  ||||||| ||||||||||  |||||| || | |||||  ||    
T  16743220 attggtcaaaaacaattgagagagaaaaaggaagagagagagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattattaaaaaatggtt 16743319  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  16743320 gtacaaatatcatttct 16743336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 32730006 - 32729890
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||| |||||||||||| ||||||||||  |||| || | ||||||||||||| | |  ||||||| ||||||||||| |||| |  ||| |||||  ||    
T  32730006 attgatcaaaaacaatagagagagaaaaaggaagagagagagtaagaatataatgtgagtatgagagagaaagttgtataaaagttgtcagaaaatggtt 32729907  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  32729906 gtacaaatatcatttct 32729890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 16337024 - 16337140
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  |||||||||| ||||| || ||| ||||||| ||| | |  ||||||| |||| || ||  ||||||  ||||||| | |||    
T  16337024 attggtcaaaaacaatggagagagaaaaatgaagagagataataagaatgtaatgtgagtatgagagagaaggtagtcaaaaaattgtcataaagtgatt 16337123  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  16337124 gtacaaatatcatttct 16337140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 11785474 - 11785356
Alignment:
Q  85 attggtcaaaaacaat--aaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataa 182  Q
    ||||||||||||||||  | ||||||||||  |||| || | | ||||||||||| | | |||||||| ||||||||||  ||||||  ||| |||||      
T  11785474 attggtcaaaaacaatggatagagagaaaaaggaagagagagaataagaatataatgtgaatatgagatagaaagttgtcaaaaaattgtcacaaaatgg 11785375  T
Q  183 ttgtacaaatatcatttct 201  Q
    |||||||||||||||||||    
T  11785374 ttgtacaaatatcatttct 11785356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 16368059 - 16368117
Alignment:
Q  144 tatgagaaagaaagttgt-acaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||||||||||||| |||||||| || |||||||  |||||||||||||||||||    
T  16368059 tatgagaaagaaagttgttacaaaaattattataaaatggttgtacaaatatcatttct 16368117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 7636440 - 7636498
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaa-tgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||||||| |||||| |||||| | || ||||||| ||||||||||||||||||||    
T  7636440 tatgagaaagagagttgtccaaaaagttattataaaatgattgtacaaatatcatttct 7636498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 201
Target Start/End: Original strand, 736853 - 736890
Alignment:
Q  164 aaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  736853 aaaaattatcataaaatagttgtacaaatatcatttct 736890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 3339512 - 3339569
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||| |  ||| |||||  |||||||||||||||||||    
T  3339512 tatgagagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttct 3339569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 12501524 - 12501475
Alignment:
Q  152 agaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||||||  ||||||  ||| ||||||||||||||||||||||||||    
T  12501524 agaaagttgtttaaaaattgtcacaaaataattgtacaaatatcatttct 12501475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 17417248 - 17417305
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||| |||||||  ||| | ||| ||||||||||||||||||||    
T  17417248 tatgagagagaaagttgtccaaaaattgtcacataatgattgtacaaatatcatttct 17417305  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 17442939 - 17442854
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatg 170  Q
    |||| |||||||||||| ||||||||||  |||| || ||| |||||| |||| | |  ||| ||| |||||||||||||||||||    
T  17442939 attgatcaaaaacaatagagagagaaaaaagaagagagataataagaagataatgtgagtataagagagaaagttgtacaaaaatg 17442854  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 23653850 - 23653962
Alignment:
Q  88 ggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgta 187  Q
    |||||||||||||  ||||||||||  |||| || | ||||| ||||||| | |  ||||||| ||||||||||  |||| | |||| ||||  ||||||    
T  23653850 ggtcaaaaacaattgagagagaaaaaggaagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtctaaaagttatca-aaaaagattgta 23653948  T
Q  188 caaatatcatttct 201  Q
    ||||||||||||||    
T  23653949 caaatatcatttct 23653962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 25995500 - 25995443
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| ||||||||||||||||||   || |||||  |||||||||||||||||||    
T  25995500 tatgagagagaaagttgtacaaaaattgccacaaaatggttgtacaaatatcatttct 25995443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 201
Target Start/End: Original strand, 26396508 - 26396545
Alignment:
Q  164 aaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||| || ||||||||||||||||||||||||||||    
T  26396508 aaaaattattataaaataattgtacaaatatcatttct 26396545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 27334916 - 27334859
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||| ||||||| ||||||| |  ||| |||||| |||||||||||||||||||    
T  27334916 tatgagaaggaaagttatacaaaagttgtcacaaaatagttgtacaaatatcatttct 27334859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 27395656 - 27395599
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    |||||||| ||||||| ||||||| |  ||| |||||| |||||||||||||||||||    
T  27395656 tatgagaaggaaagttatacaaaagttgtcacaaaatagttgtacaaatatcatttct 27395599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 11635734 - 11635618
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||||||||| |||  |||||||||| | ||| ||||||  ||||| ||||   |  ||||| | |||||||| |  |||||| ||||||||||  ||    
T  11635734 attggtcaaaaataatggagagagaaaaataaagagaaataaaaagaacataatttgagtatgaaagagaaagttattaaaaaattatcataaaattgtt 11635635  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  11635634 gtacaaatatcatttct 11635618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 19789030 - 19789146
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| |||| |||||||||||||||  |||| || | | ||||| ||||| | |  ||||||| ||||||||||  |||| |  | |||||||  ||    
T  19789030 attggtccaaaataataaagagagaaaaaggaagagagagaataagactataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatggtt 19789129  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  19789130 gtacaaatatcatttct 19789146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 29197783 - 29197727
Alignment:
Q  143 atatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcattt 199  Q
    |||||||| ||||| |||| ||||||| |||| ||||| ||||||||||||| ||||    
T  29197783 atatgagagagaaaattgtccaaaaattatcacaaaatgattgtacaaatattattt 29197727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 4424 - 4316
Alignment:
Q  93 aaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaat 192  Q
    ||||||||| ||||||||||  |||| || | | ||||||||||| | |  ||||||| ||||||||||  |||| | ||||||||||  ||||||||||    
T  4424 aaaacaatagagagagaaaaaggaagagagagaataagaatataatgtgagtatgagatagaaagttgtcaaaaagttatcataaaatggttgtacaaat 4325  T
Q  193 atcatttct 201  Q
    |||||||||    
T  4324 atcatttct 4316  T

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Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 337235 - 337119
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||||||||||||  ||||||||||  |||| || | ||||||||||||| | |  ||||||| |||||||| | ||||| |  ||| |||||  ||    
T  337235 attggtcaaaaacaatggagagagaaaaaggaagagagagagtaagaatataatgtgagtatgagagagaaagttattcaaaagttgtcagaaaatggtt 337136  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  337135 gtacaaatatcatttct 337119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 156023 - 155907
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    ||||||| ||||||||||||||||||||  |||| || | | ||||||||||| | |  || |||| ||||||||||  |||| |  | |||||||  ||    
T  156023 attggtccaaaacaataaagagagaaaaaggaagagagagaataagaatataatgtgagtacgagagagaaagttgtcaaaaagttgtaataaaatggtt 155924  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  155923 gtacaaatatcatttct 155907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Original strand, 249096 - 249212
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||| |||||||||||  |||||||||| ||||| |||||  |||||  || | | |  ||||||| |||||||||||||||| | |||| ||| | |||    
T  249096 attgatcaaaaacaatggagagagaaaaatgaagagaaatgataagaccatcatgtgagtatgagagagaaagttgtacaaaagttatcacaaattgatt 249195  T
Q  185 gtacaaatatcatttct 201  Q
    || ||||||||||||||    
T  249196 gtgcaaatatcatttct 249212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 440835 - 440719
Alignment:
Q  85 attggtcaaaaacaataaagagagaaaattgaagtgaaatagtaagaatataacgagtatatgagaaagaaagttgtacaaaaatgatcataaaataatt 184  Q
    |||||| |||||||||  ||||||||||  |||| || | |||||||||| || | |  ||||||| ||||||||||  |||| |  ||||||| || ||    
T  440835 attggtaaaaaacaatggagagagaaaaaagaagagagagagtaagaatagaatgtgagtatgagagagaaagttgtctaaaagttgtcataaagtagtt 440736  T
Q  185 gtacaaatatcatttct 201  Q
    |||||||||||||||||    
T  440735 gtacaaatatcatttct 440719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 147269 - 147326
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||| |  ||| ||| |||||||||| |||||||||||    
T  147269 tatgagagagaaagttgtacaaaagttgtcacaaattaattgtacagatatcatttct 147326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 2517 - 2574
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||| ||||||| |||| | ||||  ||||||||||||||||||    
T  2517 tatgagagagaaagttgtccaaaaattatcacataatagatgtacaaatatcatttct 2574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 18653 - 18596
Alignment:
Q  144 tatgagaaagaaagttgtacaaaaatgatcataaaataattgtacaaatatcatttct 201  Q
    ||||||| |||||||||||||||| | |||| ||| |  |||||||||||||||||||    
T  18653 tatgagagagaaagttgtacaaaagttatcacaaattggttgtacaaatatcatttct 18596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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