View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2755_low_39 (Length: 266)

Name: NF2755_low_39
Description: NF2755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2755_low_39
NF2755_low_39
[»] chr4 (54 HSPs)
chr4 (172-266)||(38005038-38005132)
chr4 (10-94)||(199226-199310)
chr4 (10-94)||(40847679-40847763)
chr4 (10-94)||(2713843-2713927)
chr4 (10-94)||(12639967-12640051)
chr4 (10-94)||(25370392-25370476)
chr4 (10-94)||(55815827-55815911)
chr4 (10-88)||(20075533-20075611)
chr4 (10-88)||(55816450-55816528)
chr4 (13-94)||(388755-388836)
chr4 (11-88)||(26423767-26423844)
chr4 (10-94)||(31876790-31876874)
chr4 (10-94)||(48091095-48091179)
chr4 (10-88)||(36945223-36945301)
chr4 (10-94)||(20422731-20422815)
chr4 (10-94)||(26424404-26424488)
chr4 (10-94)||(32291017-32291101)
chr4 (10-94)||(52597711-52597795)
chr4 (11-94)||(33569722-33569805)
chr4 (10-88)||(199007-199085)
chr4 (10-88)||(389405-389483)
chr4 (10-88)||(25369791-25369869)
chr4 (10-88)||(28223571-28223649)
chr4 (10-88)||(36111217-36111294)
chr4 (10-88)||(52597498-52597576)
chr4 (10-91)||(37567474-37567555)
chr4 (11-88)||(48090474-48090551)
chr4 (13-88)||(12640589-12640664)
chr4 (13-88)||(48782077-48782152)
chr4 (10-94)||(6862649-6862733)
chr4 (10-94)||(32901853-32901937)
chr4 (10-94)||(36944612-36944696)
chr4 (10-90)||(40344509-40344589)
chr4 (13-88)||(40345133-40345208)
chr4 (10-88)||(32902465-32902543)
chr4 (10-88)||(35427254-35427331)
chr4 (10-94)||(29809087-29809171)
chr4 (19-94)||(47321761-47321836)
chr4 (22-88)||(20422139-20422205)
chr4 (13-91)||(31842726-31842803)
chr4 (10-88)||(40848130-40848208)
chr4 (13-78)||(31877435-31877500)
chr4 (10-57)||(20076186-20076233)
chr4 (10-58)||(37566941-37566989)
chr4 (55-94)||(18501741-18501780)
chr4 (48-94)||(35428238-35428284)
chr4 (10-62)||(3708807-3708859)
chr4 (11-82)||(47328397-47328468)
chr4 (47-89)||(45772170-45772212)
chr4 (47-89)||(45778725-45778766)
chr4 (45-94)||(33570311-33570360)
chr4 (47-88)||(52869455-52869496)
chr4 (55-91)||(33758132-33758168)
chr4 (62-94)||(52938963-52938995)
[»] chr8 (36 HSPs)
chr8 (10-94)||(7818476-7818560)
chr8 (10-94)||(33114188-33114272)
chr8 (10-94)||(16889197-16889281)
chr8 (10-99)||(11999080-11999169)
chr8 (10-91)||(35237264-35237345)
chr8 (10-94)||(39852156-39852240)
chr8 (10-88)||(11998464-11998542)
chr8 (10-91)||(40309500-40309581)
chr8 (10-94)||(16879890-16879974)
chr8 (10-94)||(43480618-43480702)
chr8 (10-96)||(10806437-10806523)
chr8 (10-88)||(16880518-16880596)
chr8 (10-88)||(43591015-43591093)
chr8 (13-78)||(43481284-43481349)
chr8 (13-94)||(44062599-44062680)
chr8 (10-78)||(38778172-38778240)
chr8 (10-77)||(30115386-30115453)
chr8 (10-88)||(7819097-7819175)
chr8 (10-88)||(30115996-30116074)
chr8 (10-88)||(36848197-36848275)
chr8 (10-88)||(40907607-40907684)
chr8 (10-88)||(44061993-44062071)
chr8 (10-91)||(43591616-43591697)
chr8 (10-86)||(33113585-33113661)
chr8 (10-77)||(16889828-16889895)
chr8 (13-94)||(4374995-4375076)
chr8 (10-70)||(2209032-2209092)
chr8 (13-88)||(38778798-38778873)
chr8 (10-88)||(4373694-4373772)
chr8 (10-88)||(39852803-39852881)
chr8 (11-88)||(35237865-35237941)
chr8 (10-58)||(4374301-4374349)
chr8 (54-94)||(37532578-37532618)
chr8 (55-94)||(41761801-41761840)
chr8 (10-53)||(10805991-10806034)
chr8 (56-88)||(37533323-37533355)
[»] chr6 (15 HSPs)
chr6 (10-94)||(33668223-33668307)
chr6 (10-88)||(6032166-6032244)
chr6 (10-94)||(5523846-5523930)
chr6 (10-94)||(12809702-12809786)
chr6 (10-94)||(30611345-30611429)
chr6 (10-94)||(31723835-31723919)
chr6 (10-88)||(5523208-5523286)
chr6 (10-91)||(13936640-13936721)
chr6 (10-88)||(12809077-12809155)
chr6 (10-94)||(6032753-6032837)
chr6 (10-80)||(30610727-30610797)
chr6 (10-92)||(33648163-33648245)
chr6 (13-88)||(33668833-33668908)
chr6 (10-80)||(13944306-13944376)
chr6 (54-94)||(32079021-32079061)
[»] chr5 (25 HSPs)
chr5 (10-94)||(3957502-3957586)
chr5 (10-104)||(5324403-5324497)
chr5 (13-94)||(4929509-4929590)
chr5 (10-94)||(33430045-33430128)
chr5 (10-88)||(3739663-3739741)
chr5 (10-88)||(4928879-4928957)
chr5 (10-94)||(8813683-8813767)
chr5 (10-88)||(26687508-26687586)
chr5 (10-88)||(26957239-26957317)
chr5 (10-91)||(28075969-28076050)
chr5 (10-80)||(21770010-21770084)
chr5 (13-88)||(3958137-3958212)
chr5 (10-77)||(42408011-42408078)
chr5 (10-94)||(26688057-26688133)
chr5 (10-94)||(26957788-26957864)
chr5 (47-94)||(39149468-39149515)
chr5 (10-52)||(42408565-42408607)
chr5 (47-87)||(25075034-25075074)
chr5 (47-87)||(25133003-25133043)
chr5 (33-88)||(5324312-5324367)
chr5 (10-53)||(13738103-13738146)
chr5 (42-80)||(8813093-8813131)
chr5 (17-94)||(25074285-25074362)
chr5 (17-94)||(25132254-25132331)
chr5 (10-58)||(3739038-3739086)
[»] chr3 (48 HSPs)
chr3 (10-94)||(3944897-3944981)
chr3 (10-94)||(23584883-23584967)
chr3 (10-94)||(23599706-23599790)
chr3 (10-94)||(32672168-32672252)
chr3 (10-94)||(37373967-37374051)
chr3 (10-88)||(55281843-55281921)
chr3 (10-94)||(25025176-25025260)
chr3 (10-94)||(44868009-44868093)
chr3 (10-94)||(55282421-55282504)
chr3 (10-88)||(8427743-8427821)
chr3 (10-88)||(29342349-29342427)
chr3 (10-91)||(50687708-50687789)
chr3 (10-88)||(25025764-25025842)
chr3 (10-88)||(44868618-44868696)
chr3 (10-94)||(42356235-42356322)
chr3 (10-94)||(19555272-19555356)
chr3 (10-94)||(31014924-31015008)
chr3 (10-85)||(37375468-37375543)
chr3 (10-88)||(23584245-23584323)
chr3 (10-88)||(23599068-23599146)
chr3 (10-88)||(31014345-31014423)
chr3 (10-94)||(37374822-37374901)
chr3 (21-88)||(41459138-41459204)
chr3 (10-76)||(47737673-47737739)
chr3 (13-91)||(50675128-50675206)
chr3 (10-94)||(48219235-48219319)
chr3 (10-88)||(24220587-24220665)
chr3 (10-88)||(48218599-48218677)
chr3 (10-88)||(19555923-19556004)
chr3 (13-88)||(37374609-37374684)
chr3 (10-52)||(38575642-38575684)
chr3 (10-58)||(43658895-43658943)
chr3 (10-53)||(24221172-24221215)
chr3 (13-68)||(49752913-49752968)
chr3 (10-52)||(29342993-29343035)
chr3 (10-60)||(41875616-41875666)
chr3 (10-80)||(47737080-47737149)
chr3 (10-51)||(32672783-32672824)
chr3 (10-58)||(38575059-38575107)
chr3 (58-94)||(49752973-49753009)
chr3 (55-91)||(53269393-53269429)
chr3 (47-94)||(41040573-41040620)
chr3 (10-53)||(49752316-49752359)
chr3 (13-88)||(50674637-50674707)
chr3 (16-74)||(50687124-50687182)
chr3 (47-88)||(38279417-38279458)
chr3 (10-67)||(43103928-43103985)
chr3 (10-50)||(40887941-40887981)
[»] chr2 (36 HSPs)
chr2 (10-94)||(4386960-4387044)
chr2 (10-94)||(9224268-9224352)
chr2 (10-94)||(7716673-7716757)
chr2 (10-94)||(20244171-20244255)
chr2 (10-94)||(28223790-28223874)
chr2 (10-88)||(28224388-28224466)
chr2 (10-91)||(16571123-16571204)
chr2 (13-88)||(6849296-6849371)
chr2 (10-88)||(7583140-7583218)
chr2 (10-88)||(10883295-10883373)
chr2 (10-88)||(16887591-16887669)
chr2 (13-94)||(6849545-6849626)
chr2 (10-94)||(7583793-7583877)
chr2 (10-93)||(8113300-8113383)
chr2 (10-88)||(3595254-3595332)
chr2 (13-91)||(16903092-16903170)
chr2 (10-80)||(39477325-39477395)
chr2 (13-87)||(40166846-40166920)
chr2 (10-94)||(11256740-11256824)
chr2 (10-94)||(30161935-30162019)
chr2 (10-88)||(7717285-7717362)
chr2 (10-88)||(11256124-11256202)
chr2 (10-88)||(16571726-16571804)
chr2 (13-94)||(8963506-8963587)
chr2 (10-67)||(467134-467191)
chr2 (10-99)||(33847870-33847959)
chr2 (10-70)||(20243579-20243639)
chr2 (10-80)||(467341-467411)
chr2 (45-91)||(12206793-12206839)
chr2 (10-91)||(3595895-3595976)
chr2 (10-91)||(40165878-40165959)
chr2 (10-77)||(39476534-39476601)
chr2 (22-88)||(8112688-8112754)
chr2 (33-88)||(4386363-4386418)
chr2 (49-94)||(18950534-18950579)
chr2 (50-91)||(43743842-43743883)
[»] scaffold0229 (1 HSPs)
scaffold0229 (10-94)||(15233-15317)
[»] chr7 (31 HSPs)
chr7 (10-94)||(36682837-36682921)
chr7 (10-94)||(42455923-42456007)
chr7 (10-94)||(27855568-27855651)
chr7 (13-88)||(36683467-36683542)
chr7 (13-88)||(42456519-42456594)
chr7 (10-88)||(34853399-34853477)
chr7 (10-88)||(47814635-47814713)
chr7 (13-93)||(19816895-19816975)
chr7 (10-94)||(47813973-47814057)
chr7 (10-93)||(4895082-4895165)
chr7 (10-80)||(4894515-4894585)
chr7 (10-88)||(19816272-19816350)
chr7 (10-88)||(24044043-24044121)
chr7 (13-90)||(22276079-22276156)
chr7 (10-91)||(34853996-34854077)
chr7 (10-94)||(46732569-46732653)
chr7 (10-85)||(46814416-46814491)
chr7 (10-94)||(46815062-46815145)
chr7 (10-88)||(22275433-22275510)
chr7 (10-96)||(33805969-33806055)
chr7 (13-94)||(36620120-36620201)
chr7 (10-88)||(24323982-24324059)
chr7 (10-88)||(30711796-30711874)
chr7 (10-74)||(32499872-32499936)
chr7 (10-58)||(32499287-32499335)
chr7 (10-53)||(18520900-18520943)
chr7 (45-93)||(33806602-33806650)
chr7 (55-94)||(85094-85133)
chr7 (42-88)||(27856162-27856208)
chr7 (49-94)||(30422782-30422826)
chr7 (13-50)||(36620743-36620780)
[»] chr1 (28 HSPs)
chr1 (10-94)||(1403042-1403126)
chr1 (10-101)||(6288204-6288295)
chr1 (10-88)||(1403688-1403765)
chr1 (10-100)||(8560152-8560242)
chr1 (12-94)||(27817006-27817088)
chr1 (10-88)||(49533751-49533829)
chr1 (10-94)||(49534396-49534480)
chr1 (10-80)||(42839548-42839618)
chr1 (10-80)||(43368206-43368276)
chr1 (10-88)||(43368835-43368913)
chr1 (10-88)||(52859788-52859866)
chr1 (10-91)||(42838942-42839023)
chr1 (10-88)||(7219648-7219725)
chr1 (10-88)||(8560743-8560820)
chr1 (10-88)||(27797125-27797203)
chr1 (10-88)||(42839709-42839787)
chr1 (10-91)||(27797736-27797817)
chr1 (10-94)||(7782691-7782775)
chr1 (10-88)||(48843588-48843666)
chr1 (13-85)||(42840316-42840388)
chr1 (10-80)||(51248483-51248553)
chr1 (10-58)||(48843962-48844010)
chr1 (47-94)||(29148942-29148989)
chr1 (10-53)||(48369525-48369568)
chr1 (10-52)||(37725423-37725465)
chr1 (10-80)||(41563195-41563265)
chr1 (10-51)||(41563792-41563833)
chr1 (10-74)||(27934295-27934358)
[»] scaffold0007 (1 HSPs)
scaffold0007 (10-94)||(11268-11351)
[»] scaffold0368 (1 HSPs)
scaffold0368 (10-91)||(11784-11865)
[»] scaffold1095 (1 HSPs)
scaffold1095 (10-88)||(1493-1571)


Alignment Details
Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 172 - 266
Target Start/End: Complemental strand, 38005132 - 38005038
Alignment:
Q  172 tcaatatttgtcaaaaatccattttctcatgttgtattctttttgttattttataaatgctgagaaaattctagagagaagaaaatataaaagtc 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38005132 tcaatatttgtcaaaaatccattttctcatgttgtattctttttgttattttataaatgctgagaaaattctagagagaagaaaatataaaagtc 38005038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 199226 - 199310
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  199226 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgcca 199310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 40847763 - 40847679
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  40847763 aagaatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaaccttttccatgtgaaatgcca 40847679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 2713843 - 2713927
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  2713843 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaaatgcca 2713927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 12640051 - 12639967
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  12640051 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaaatgcca 12639967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 25370392 - 25370476
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  25370392 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtaaaatgcca 25370476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 55815911 - 55815827
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| ||| |||||||||||||||||||||| |||||||||||||    
T  55815911 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtgggaaaggattaacctttcccatgtgaaatgcca 55815827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 20075611 - 20075533
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  20075611 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 20075533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 55816450 - 55816528
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  55816450 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 55816528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 388836 - 388755
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||| |||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  388836 aatatgtttttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgcca 388755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 26423844 - 26423767
Alignment:
Q  11 agaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  26423844 agaatatgttcttcacttaatctaatcattgaatccaactttttcatggtgggaaaggattaacctttcccatgtgaa 26423767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 31876874 - 31876790
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||  |||||||| ||||||||||||||||| |||||||||||||    
T  31876874 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaacctttcccatgtgaaatgcca 31876790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 48091095 - 48091179
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||| ||||||||||||| || ||||||||||    
T  48091095 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatatgaaatgcca 48091179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 36945223 - 36945301
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||| ||||||||||||||||| |||||||    
T  36945223 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaa 36945301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 20422731 - 20422815
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||  |||||||| |||||||||| |||||| |||||||||||||    
T  20422731 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaagctttcccatgtgaaatgcca 20422815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 26424404 - 26424488
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||| |||| | |||||||||| |||||||||||||    
T  26424404 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaagaactaacctttcccatgtgaaatgcca 26424488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 32291101 - 32291017
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||| | ||||| ||||||||||||| |||||||||||||    
T  32291101 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatgattggaaatgattaacctttcccatgtgaaatgcca 32291017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 52597711 - 52597795
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| ||||||||||||  ||||||  ||||||||||||||||| |||||||||||||    
T  52597711 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtgaaaaaggattaacctttcccatgtgaaatgcca 52597795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 33569805 - 33569722
Alignment:
Q  11 agaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||||||||||||||||| |||| ||| |||||||||||  ||||||||||||||||| |||||||| |||||||||||||    
T  33569805 agaatatgttcttcacttaatctaattattgaatccaacttttccatggtgggaaaggattgacctttcccatgtgaaatgcca 33569722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 199085 - 199007
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||  ||||||| |||||||||||||||||||||||||| |||||||    
T  199085 aagaatatgttcttcacttaatctaatcattgaatttaactttcccatggtgggaaaggattaacctttcccatgtgaa 199007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 389405 - 389483
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||| | |||||||||||  |||||||||||||||||||||||||| |||||||    
T  389405 aagaatatgttcttcacttaatctaatcactgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaa 389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 25369869 - 25369791
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||||||||||| ||| |||| ||||||||||||||||| |||||||    
T  25369869 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtggaaaaggattaacctttcccatgtgaa 25369791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 28223649 - 28223571
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||| | |||||| ||||||||||||| |||||||    
T  28223649 aagaatatgttcttcacttaatctaatcattgaatccaactttctcatagagggaaaagattaacctttcccatgtgaa 28223571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 36111217 - 36111294
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| ||||||| |||| |||||||||||||||||||||||||| |||||||    
T  36111217 aagaatatgttcttcacttaatctaatcattgaatccaa-tttcccatggtgggaaaggattaacctttcccatgtgaa 36111294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 52597576 - 52597498
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| |||||||||||| ||||||||||||| |||||||    
T  52597576 aagaatatgttcttcacttaatctaatcattgaatctaactttcccatggtgggaaaagattaacctttcccatgtgaa 52597498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 37567474 - 37567555
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    |||||||||||||| ||||||| |||||||| |||||||||||| |||||||| |||| |||||||||||| ||||||||||    
T  37567474 aagaatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaaagtattaacctttcccatgtgaaatg 37567555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 48090551 - 48090474
Alignment:
Q  11 agaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||| |||||||| |||||||| |||||||||||| ||||||||||| |||||||||||||| |||||||    
T  48090551 agaatatgttctacacttaatctaatcattgaatccaactttcccatggtgggaatggattaacctttcccatgtgaa 48090474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 12640589 - 12640664
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||||||| |||||| |||||||    
T  12640589 aatatgttcttcgcttaatctaatcattgaatccaactttcccatggtgggaaaggattaagctttcccatgtgaa 12640664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 48782077 - 48782152
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||||| |||| ||||||||||||| |||||||    
T  48782077 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgcgaaatgattaacctttcccatgtgaa 48782152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 6862733 - 6862649
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| ||||| || ||||||||||||  ||||| | ||| |||| ||||||||||||||||||||||    
T  6862733 aagaatatgttcttcacttaatctaatctttgaatccaactttcctatggtagaaaaagattgacctttcctatgtgaaatgcca 6862649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 32901937 - 32901853
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||| ||||||| |||||||| |||||||||||| |||||||| ||||||| | | ||||| |||||||||||||    
T  32901937 aagaatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaaaggataatcttttcccatgtgaaatgcca 32901853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 36944696 - 36944612
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||  |||||||| ||| ||||||||||||   ||||||||||||    
T  36944696 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaagattaacctttcacgtgtgaaatgcca 36944612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 40344589 - 40344509
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaat 90  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||||| || ||||||||||| |||||| || ||||||    
T  40344589 aagaatatgttcttcacttaatctaataatttaatccaactttctcatgatgagaaaggattaaactttcccatatgaaat 40344509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 40345133 - 40345208
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||||||||||| |||||||| |||| ||||||| ||| |||||||| ||||||||||||| |||||||    
T  40345133 aatatgttcttcacttaatctaatcattgaatctaactttcccattgtgggaaaagattaacctttcccatgtgaa 40345208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 32902465 - 32902543
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||  |||||||||||  |||||||    
T  32902465 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaatattaacctttctcatgtgaa 32902543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 35427331 - 35427254
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| ||||||| |||| ||||| || ||||||||||||||||| |||||||    
T  35427331 aagaatatgttcttcacttaatctaatcattgaatccaa-tttcccatggcggaaaaggattaacctttcccatgtgaa 35427254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 29809087 - 29809171
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| ||| |||||||| |||| |  |||| ||||||||||||| || ||||||||||    
T  29809087 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatgataagaaatgattaacctttcccatatgaaatgcca 29809171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 47321836 - 47321761
Alignment:
Q  19 ttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||||||||| ||||||||||||||||||||  ||| |||  ||||||||||||||||| || ||||||||||    
T  47321836 ttcttcacttaatctaatcattaaatccaacttttccatagtgataaaggattaacctttcccatatgaaatgcca 47321761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 20422205 - 20422139
Alignment:
Q  22 ttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||| |||||||| |||| | ||||| |||||||||||||||||||||||||| |||||||    
T  20422205 ttcacttaatctaatcattgaatctacctttcccatggtgggaaaggattaacctttcccatgtgaa 20422139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 31842726 - 31842803
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    ||||||||||||||||||| |||||||| ||||| |||||| |||||| ||||| |||||||||||| ||||| |||||    
T  31842726 aatatgttcttcacttaatctaatcattgaatcc-actttcccatggttggaaatgattaacctttcatatgtaaaatg 31842803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 40848130 - 40848208
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| ||| ||| |||| ||||||||||| | |||||||    
T  40848130 aagaatatgttcttcacttaatctaatcattgaatcaaactttcccatagtgagaaatgattaaccttttccatgtgaa 40848208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 31877435 - 31877500
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaaccttt 78  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| |||  |||||||||| ||||    
T  31877435 aatatgttcttcacttaatctaatcattaaatccaactttcccatagtgaaaaaggattaaacttt 31877500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 20076186 - 20076233
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcat 57  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  20076186 aagaatatgttcttcacttaatctaatcattgaatccaactttctcat 20076233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 37566989 - 37566941
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatg 58  Q
    ||||||||||||||||||||||||||||||| |||| || |||||||||    
T  37566989 aagaatatgttcttcacttaatttaatcattgaatctaattttctcatg 37566941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 94
Target Start/End: Complemental strand, 18501780 - 18501741
Alignment:
Q  55 catggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  18501780 catggtgggaaaggattaacctttcccatgtgaaatgcca 18501741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 35428238 - 35428284
Alignment:
Q  48 actttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||| |||||||||||||||||||||||||| || ||||||||||    
T  35428238 actttcccatggtgggaaaggattaacctttcccatctgaaatgcca 35428284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 3708859 - 3708807
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgg 62  Q
    |||| ||||||||| ||||||| |||||||| |||||||||||| ||||||||    
T  3708859 aagagtatgttctttacttaatctaatcattgaatccaactttcccatggtgg 3708807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 47328397 - 47328468
Alignment:
Q  11 agaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttccta 82  Q
    ||||||||||||||||||||| |||| ||| |||| ||||||  ||| || ||||| ||| |||||||||||    
T  47328397 agaatatgttcttcacttaatctaattattgaatctaacttttccatagtaggaaaagatgaacctttccta 47328468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 45772212 - 45772170
Alignment:
Q  47 aactttctcatggtgggaaaggattaacctttcctatgtgaaa 89  Q
    |||||||| ||||||||||||||||||||||| | ||||||||    
T  45772212 aactttcttatggtgggaaaggattaaccttttccatgtgaaa 45772170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 45778725 - 45778766
Alignment:
Q  47 aactttctcatggtgggaaaggattaacctttcctatgtgaaa 89  Q
    |||||||| ||||||||||||||||||||||||| ||||||||    
T  45778725 aactttct-atggtgggaaaggattaacctttcccatgtgaaa 45778766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 33570311 - 33570360
Alignment:
Q  45 ccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||| ||||||| |||||||| |||||| | |||||||||||||    
T  33570311 ccaactttcttatggtggaaaaggattgaccttttccatgtgaaatgcca 33570360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 52869496 - 52869455
Alignment:
Q  47 aactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||| ||||||||||||||||| |||||||| |||||||    
T  52869496 aactttcccatggtgggaaaggattcacctttcccatgtgaa 52869455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 33758132 - 33758168
Alignment:
Q  55 catggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  33758132 catggtgggaaaggattgacctttcccatgtgaaatg 33758168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 52938963 - 52938995
Alignment:
Q  62 ggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||||| ||||||||    
T  52938963 ggaaaggattaacctttcctatgttaaatgcca 52938995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 7818560 - 7818476
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  7818560 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgcca 7818476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 33114188 - 33114272
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  33114188 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgcca 33114272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 16889281 - 16889197
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||| ||||||||||||| |||||||||||||    
T  16889281 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatgtgaaatgcca 16889197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 11999080 - 11999169
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgccatccaa 99  Q
    ||||||||||||||||||| || |||||||| |||||||||||| |||||||||||| ||||||||||||| ||||||||||||| ||||    
T  11999080 aagaatatgttcttcacttcatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaaatgccacccaa 11999169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 35237345 - 35237264
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    ||||||||||| |||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  35237345 aagaatatgttattcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatg 35237264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 39852240 - 39852156
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| || ||||||||||    
T  39852240 aagaatatgttcttcacttaatctaatcattgaatcaaactttcccatggtgggaaaggattaacctttcccatttgaaatgcca 39852156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 11998542 - 11998464
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||| ||||||||||||| |||||||    
T  11998542 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 11998464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 40309500 - 40309581
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    |||||||||||||||||||||| |||||||| ||||||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  40309500 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtgggaaatgattaaccttttctatgtgaaatg 40309581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 16879974 - 16879890
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||| ||||||| ||||| |||||||||||||    
T  16879974 aagaatatgttcttcacttaatctaatcattgaatccaactttctcatgataggaaatgattaacttttcccatgtgaaatgcca 16879890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 43480702 - 43480618
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||  ||| ||||||||||||| |||||||||||||    
T  43480702 aagaatatgttcttcacttaatctaatcatttaatccaactttcccatggtgtaaaaagattaacctttcccatgtgaaatgcca 43480618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 10806437 - 10806523
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgccatc 96  Q
    |||||||||||||| |||||||||||||||| |||| ||||||| |||||| ||||| ||||||||||||| |||||||||| ||||    
T  10806437 aagaatatgttctttacttaatttaatcattgaatcaaactttcccatggtaggaaaagattaacctttcccatgtgaaatggcatc 10806523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 16880518 - 16880596
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| ||||||||||||||||||| |||||| |||||||    
T  16880518 aagaatatgttcttcacttaatctaatcattgaatctaactttcacatggtgggaaaggattaatctttcccatgtgaa 16880596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 43591093 - 43591015
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||| |||||||||||||||||||||||||| |||||||    
T  43591093 aagaatatgttcttcatttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcccatgtgaa 43591015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 43481284 - 43481349
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaaccttt 78  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  43481284 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttt 43481349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 44062599 - 44062680
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||| |||| |||||||| |||||||| |||||||||||| |||||||| |||||||||||||||||||| ||||||||||    
T  44062599 aatatattctccacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcctatatgaaatgcca 44062680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 38778240 - 38778172
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaaccttt 78  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||| |||||||||||    
T  38778240 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaaccttt 38778172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 30115453 - 30115386
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctt 77  Q
    |||||||||||||||||||||| |||||||| |||||||||||  |||||||||||||||||||||||    
T  30115453 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctt 30115386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 7819097 - 7819175
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| |||||||||||| |||||| |||||| |||||||    
T  7819097 aagaatatgttcttcacttaatctaatcattgaatctaactttcgcatggtgggaaaagattaatctttcccatgtgaa 7819175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 30115996 - 30116074
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||| ||||| ||||||| |||||||| |||||||||||| |||||||| ||||||||||||||||| |||||||    
T  30115996 aagaatatattctttacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaa 30116074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 36848197 - 36848275
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||||||||||  |||||||| |||||||||| |||||| |||||||    
T  36848197 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaagctttcccatgtgaa 36848275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 40907684 - 40907607
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| | |||||||||||||||||||||||| |||||||    
T  40907684 aagaatatgttcttcacttaatctaatcattgaatc-aactttcccgtggtgggaaaggattaacctttcccatgtgaa 40907607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 44062071 - 44061993
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||| |||||| |||||||||||  |||||||    
T  44062071 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggttggaaagtattaacctttctcatgtgaa 44061993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 43591616 - 43591697
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    |||||||||||||||||||||| |||||||| | || ||||||| ||||||||||||  |||||||||||| ||||||||||    
T  43591616 aagaatatgttcttcacttaatctaatcattgactctaactttcccatggtgggaaataattaacctttcccatgtgaaatg 43591697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 33113661 - 33113585
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtg 86  Q
    |||||||| ||||||||||||| |||||||| |||||||||||| |||||||||||| |||||| |||||| |||||    
T  33113661 aagaatatattcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaatctttcccatgtg 33113585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 16889828 - 16889895
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctt 77  Q
    |||||||||||||||||||||| |||| ||| |||||||||||| |||||||||||| ||||||||||    
T  16889828 aagaatatgttcttcacttaatctaataattgaatccaactttcccatggtgggaaatgattaacctt 16889895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 4374995 - 4375076
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||||| ||| |||| | |||||| || ||||||||||    
T  4374995 aatatgttcttcacttaatccaatcattgaatccaactttctcatggtggaaaatgattcatctttcccatatgaaatgcca 4375076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 2209092 - 2209032
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggat 70  Q
    ||||||||||| |||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  2209092 aagaatatgttattcacttaatctaatcattgaatcgaactttctcatggtgggaaaggat 2209032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 38778798 - 38778873
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||| ||||||||||||| |||||||| ||| |||||||||||||||| |||| ||||||||||||  |||||||    
T  38778798 aatatattcttcacttaatctaatcattgaatacaactttctcatggtgagaaatgattaacctttctcatgtgaa 38778873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 4373772 - 4373694
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||  ||| ||||||| ||||||| ||||| |||||||    
T  4373772 aagaatatgttcttcacttaatataatcattgaattcaactttcctatgatgggaaatgattaacatttcccatgtgaa 4373694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 39852803 - 39852881
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||| ||||||||||||| |||| ||| |||| |||||| | ||||||||||||||||||||||||  |||||||    
T  39852803 aagaatatattcttcacttaatctaataattgaatctaacttttttatggtgggaaaggattaacctttctcatgtgaa 39852881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 35237865 - 35237941
Alignment:
Q  11 agaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||||||||||||| |||| ||| |||| |  ||||| ||||||||||||||||||||||||| |||||||    
T  35237865 agaatatgttcttcacttaatctaattattgaatcaacttttct-atggtgggaaaggattaacctttcccatgtgaa 35237941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 4374301 - 4374349
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatg 58  Q
    |||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  4374301 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 4374349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 37532618 - 37532578
Alignment:
Q  54 tcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  37532618 tcatggtgggaaaggattaacctttcccatgtgaaatgcca 37532578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 94
Target Start/End: Complemental strand, 41761840 - 41761801
Alignment:
Q  55 catggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  41761840 catggtgggaaaggattaacctttcccatgtgaaatgcca 41761801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 10806034 - 10805991
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttc 53  Q
    |||||||||||||||| ||||| |||||||| ||||||||||||    
T  10806034 aagaatatgttcttcatttaatctaatcattgaatccaactttc 10805991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 37533323 - 37533355
Alignment:
Q  56 atggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||||||||||||||||| |||||||    
T  37533323 atggtgggaaaggattaacctttcccatgtgaa 37533355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 5e-31; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 33668307 - 33668223
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||| |||||||||||||    
T  33668307 aagaatatgttcttcacttaatttaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaaatgcca 33668223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 6032244 - 6032166
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||||||||||| ||| |||||||||||||||||||||| |||||||    
T  6032244 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtgggaaaggattaacctttcccatgtgaa 6032166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 5523846 - 5523930
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||| |||||||  ||||||||||| ||||||||||||| |||||||||||||    
T  5523846 aagaatatgttcttcacttaatctaatcattgaatcaaactttccaatggtgggaaaagattaacctttcccatgtgaaatgcca 5523930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 12809702 - 12809786
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| ||   ||||||||||||||||||||| |||||||||||||    
T  12809702 aagaatatgttcttcacttaatctaatcattgaatccaactttcccaccatgggaaaggattaacctttcccatgtgaaatgcca 12809786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 30611345 - 30611429
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||| ||||| |||||||| |||||||||||| |||||||||||||||||||| ||||  |||||||||||||    
T  30611345 aagaatatgttcttcagttaatctaatcattgaatccaactttcccatggtgggaaaggattaacatttctcatgtgaaatgcca 30611429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 31723919 - 31723835
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||||||||||| |||| |||||| ||||||||||||||||||| || | ||||||||    
T  31723919 aagaatatgttcttcacttaatctaatcattaaatccaaatttcccatggtaggaaaggattaacctttcccatataaaatgcca 31723835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 5523286 - 5523208
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| ||||||||||||  ||||||| ||||||||||||||||| |||||||    
T  5523286 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtggaaaaggattaacctttcccatgtgaa 5523208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 13936640 - 13936721
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    |||||||||||||| ||||||| |||||||| | || ||||||| |||||||||||||||||||||||||| ||||||||||    
T  13936640 aagaatatgttctttacttaatctaatcattgactctaactttcccatggtgggaaaggattaacctttcccatgtgaaatg 13936721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 12809155 - 12809077
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| ||||||||  |||||||||||  || |||||||||||||||||||||| |||||||    
T  12809155 aagaatatgttcttcacttaatctaatcattgcatccaactttcctatagtgggaaaggattaacctttcccatgtgaa 12809077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 6032753 - 6032837
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||||| ||||  |||||||||| | || ||||||||||    
T  6032753 aagaatatgttcttcacttaatctaatcattgaatctaactttctcatggtgagaaaaaattaaccttttccatatgaaatgcca 6032837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 30610797 - 30610727
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcc 80  Q
    |||||||||||||||||||||| |||||||| ||||||| |||| |||||||| ||| |||||||||||||    
T  30610797 aagaatatgttcttcacttaatctaatcattgaatccaattttcccatggtggaaaatgattaacctttcc 30610727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 33648163 - 33648245
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgc 92  Q
    |||||||| |||||||||||||| ||||||| ||||||| ||||  |||||| ||||| ||| |||||||| |||||||||||    
T  33648163 aagaatatattcttcacttaattcaatcattgaatccaattttcctatggtgtgaaagaattgacctttcccatgtgaaatgc 33648245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 33668833 - 33668908
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||| ||||||||||||| |||||||| |||||||||||   ||||||||||| ||||||| ||||| |||||||    
T  33668833 aatatattcttcacttaatctaatcattgaatccaacttttctatggtgggaaatgattaacatttccaatgtgaa 33668908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 13944376 - 13944306
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcc 80  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||| |||| ||||||| |||||| ||||||    
T  13944376 aagaatatgttcttcatttaatctaatcattgaattcaactttcccatgatgggaaatgattaatctttcc 13944306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 32079061 - 32079021
Alignment:
Q  54 tcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||||| |||||||| |||||||| |||||||||||||    
T  32079061 tcatggtggaaaaggattcacctttcccatgtgaaatgcca 32079021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 5e-31; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 3957586 - 3957502
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  3957586 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgcca 3957502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 5324403 - 5324497
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgccatccaaatata 104  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||  ||||| |||||||||||| |||||||||| || |||||||||    
T  5324403 aagaatatgttcttcacttaatctaatcattgaatccaactttctcatggtatgaaagaattaacctttcccatgtgaaatgtcacccaaatata 5324497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 4929509 - 4929590
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||| ||||||||||||| |||||||| |||||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  4929509 aatatattcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaaatgcca 4929590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 33430128 - 33430045
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||| ||||||||||||||||| | |||||||||||||    
T  33430128 aagaatatgttcttcacttaatctaatcattgaatccaactttc-catggtaggaaaggattaaccttttccatgtgaaatgcca 33430045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 3739663 - 3739741
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||| || ||||||||||||  |||||||||||||    
T  3739663 aagaatatgttcttcacttaatctaatcattgaatccaactttctcatagtaggaaaggattaagttttcctatgtgaa 3739741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 4928957 - 4928879
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||| ||||| |||||||    
T  4928957 aagaatatgttcttcacttaatctaatcattaaatccaacttttctatggtgggaaaggattaacttttcccatgtgaa 4928879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 8813683 - 8813767
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||| ||||||| |||||||| |||||||||||| |||| ||| ||||||||||||||||| || ||||||||||    
T  8813683 aagaatatgttctttacttaatctaatcattgaatccaactttcccatgatggaaaaggattaacctttcccatatgaaatgcca 8813767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 26687586 - 26687508
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| |||||| | ||||||||||||||||| |||||||    
T  26687586 aagaatatgttcttcacttaatctaatcattgaatctaactttcccatggtagaaaaggattaacctttcccatgtgaa 26687508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 26957317 - 26957239
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| |||||| | ||||||||||||||||| |||||||    
T  26957317 aagaatatgttcttcacttaatctaatcattgaatctaactttcccatggtagaaaaggattaacctttcccatgtgaa 26957239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 28075969 - 28076050
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    |||||||| || |||||||||| |||||||| |||||||||||| |||||||| ||| ||||||||||| | ||||||||||    
T  28075969 aagaatatatttttcacttaatctaatcattgaatccaactttcccatggtggaaaatgattaaccttttccatgtgaaatg 28076050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 21770084 - 21770010
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaat----ccaactttctcatggtgggaaaggattaacctttcc 80  Q
    |||||||||||||||||||||| |||||||| |||    ||||||||| |||||||| |||||||||||||||||    
T  21770084 aagaatatgttcttcacttaatctaatcattgaatccaaccaactttcccatggtggaaaaggattaacctttcc 21770010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 3958137 - 3958212
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||||||||||| |||| ||| |||| |||||||   || ||||||||||||||||||||| |||||||    
T  3958137 aatatgttcttcacttaatctaattattgaatcaaactttccattgatgggaaaggattaacctttcccatgtgaa 3958212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 42408078 - 42408011
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctt 77  Q
    |||||||||||||||| ||||| |||||||| ||||||| |||| ||| |||||||| ||||||||||    
T  42408078 aagaatatgttcttcatttaatctaatcattgaatccaattttcccatagtgggaaaagattaacctt 42408011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 26688057 - 26688133
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||| |         |||||||||||||||||||||||| |||||||||||||    
T  26688057 aagaatatgttcttcacttaatataatcattgaatctag--------tggtgggaaaggattaacctttcccatgtgaaatgcca 26688133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 26957788 - 26957864
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||| |         |||||||||||||||||||||||| |||||||||||||    
T  26957788 aagaatatgttcttcacttaatataatcattgaatctag--------tggtgggaaaggattaacctttcccatgtgaaatgcca 26957864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 39149468 - 39149515
Alignment:
Q  47 aactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  39149468 aactttcccatggtgggaaaggattcacctttcccatgtgaaatgcca 39149515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 42408565 - 42408607
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaacttt 52  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  42408565 aagaatatgttcttcacttaatctaatcattgaatccaacttt 42408607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 25075034 - 25075074
Alignment:
Q  47 aactttctcatggtgggaaaggattaacctttcctatgtga 87  Q
    ||||||| |||||||||||||||||||||||||| ||||||    
T  25075034 aactttcccatggtgggaaaggattaacctttcccatgtga 25075074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 25133003 - 25133043
Alignment:
Q  47 aactttctcatggtgggaaaggattaacctttcctatgtga 87  Q
    ||||||| |||||||||||||||||||||||||| ||||||    
T  25133003 aactttcccatggtgggaaaggattaacctttcccatgtga 25133043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 5324367 - 5324312
Alignment:
Q  33 taatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||| |||||||||||| |||| | |||||||||||| |||||| |||||||    
T  5324367 taatcattgaatccaactttcccatgataggaaaggattaagctttcccatgtgaa 5324312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 13738146 - 13738103
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttc 53  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||    
T  13738146 aagaatatgttcttcacttaatccaatcattgaatccaactttc 13738103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 8813131 - 8813093
Alignment:
Q  42 aatccaactttctcatggtgggaaaggattaacctttcc 80  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  8813131 aatccaactttcccatggtgggagaggattaacctttcc 8813093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 25074362 - 25074285
Alignment:
Q  17 tgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||||| ||||| ||||  ||||||  ||||||| |||||||| ||| |||||||| || | |||||||||||||    
T  25074362 tgttcttcaattaatctaatggttaaatttaactttcccatggtggaaaaagattaaccatttccatgtgaaatgcca 25074285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 25132331 - 25132254
Alignment:
Q  17 tgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||||| ||||| ||||  ||||||  ||||||| |||||||| ||| |||||||| || | |||||||||||||    
T  25132331 tgttcttcaattaatctaatggttaaatttaactttcccatggtggaaaaagattaaccatttccatgtgaaatgcca 25132254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 3739086 - 3739038
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatg 58  Q
    |||||||| || |||||||||| |||||||| |||||||||||| ||||    
T  3739086 aagaatatatttttcacttaatctaatcattgaatccaactttcccatg 3739038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 5e-31; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 3944981 - 3944897
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  3944981 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgcca 3944897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 23584883 - 23584967
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  23584883 aagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtgggaaaggattaacctttcccatgtgaaatgcca 23584967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 23599706 - 23599790
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  23599706 aagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtgggaaaggattaacctttcccatgtgaaatgcca 23599790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 32672252 - 32672168
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||||||||    
T  32672252 aagaatatgttcttcacttaatctaatcattaaatccaactttcccatgttgggaaaggattaacctttcccatgtaaaatgcca 32672168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 37374051 - 37373967
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||| |||| ||||||||    
T  37374051 aagaatatgttcttcacttaatttaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatgtaaaatgcca 37373967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 55281921 - 55281843
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| |||||||    
T  55281921 aagaatatgttcttcacttaatctaatcattaaatccaattttcccatggtgggaaaggattaacctttcccatgtgaa 55281843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 25025260 - 25025176
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  25025260 aagaatatgttcttcacttaatctaatcattgaatcaaactttcccatgatgggaaaggattaacctttcccatgtgaaatgcca 25025176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 44868093 - 44868009
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||| ||||||| |||||||| |||||||||||| |||||||| ||| |||||||||||||||||||||||||||    
T  44868093 aagaatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaaatgattaacctttcctatgtgaaatgcca 44868009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 55282421 - 55282504
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  55282421 aagaatatgttcttcacttaatctaatcattaaatccaactttcccatggtgggaaaggattaaac-ttcccatgtgaaatgcca 55282504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 8427743 - 8427821
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  8427743 aagaatatgttcttcacttaatctaatcattaaatctaactttcccatggtgggaaaggattaaccttccccatgtgaa 8427821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 29342427 - 29342349
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||| ||||||||||||| |||||||    
T  29342427 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatgtgaa 29342349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 50687708 - 50687789
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| ||||||||||||| |||||||||||| ||||||||||    
T  50687708 aagaatatgttcttcacttaatctaatcattgaatcaaactttcccatggtgggaaagaattaacctttcccatgtgaaatg 50687789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 25025764 - 25025842
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||||||| |||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||||||    
T  25025764 aagaatatgttcttctcttaatctaatcattgaatcaaactttcccatggtgggaaaggattaacctttcccatgtgaa 25025842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 44868618 - 44868696
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||| || |||| |||||||||||||||||||||||||| |||||||    
T  44868618 aagaatatgttcttcacttaatctaatcattgaatcaaattttcccatggtgggaaaggattaacctttcccatgtgaa 44868696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 42356322 - 42356235
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctca---tggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| ||   ||||||||||||||| |||||||| |||||||||||||    
T  42356322 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggtgggaaaggattgacctttcccatgtgaaatgcca 42356235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 19555356 - 19555272
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||| ||||||| |||||||||||   |||||||||||||    
T  19555356 aagaatatgttcttcacttaatctaatcatttaatccaactttcccatgatgggaaaagattaacctttttcatgtgaaatgcca 19555272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 31014924 - 31015008
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| ||||||||||||  ||| ||||||| ||||||||||||| || ||||||||||    
T  31014924 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatgatgggaaaagattaacctttcccatatgaaatgcca 31015008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 37375468 - 37375543
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgt 85  Q
    ||||| |||||||||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||| ||||    
T  37375468 aagaagatgttcttcacttaatctaatcatcgaatccaactttcttatggtgggaaaggattaacctttcccatgt 37375543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 23584323 - 23584245
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||| |||||||||| |||||||| |||| ||||||| |||||||||||||||||||||| ||| |||||||    
T  23584323 aagaatatgtttttcacttaatctaatcattgaatcgaactttcccatggtgggaaaggattaacctgtcccatgtgaa 23584245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 23599146 - 23599068
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||| |||||||||| |||||||| |||| ||||||| |||||||||||||||||||||| ||| |||||||    
T  23599146 aagaatatgtttttcacttaatctaatcattgaatcgaactttcccatggtgggaaaggattaacctgtcccatgtgaa 23599068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 31014423 - 31014345
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||| |||||||||| |||||  |||||||    
T  31014423 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaatctttctcatgtgaa 31014345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 37374901 - 37374822
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |     |||||||||||||||||||| |||||||||||||    
T  37374901 aagaatatgttcttcacttaatctaatcattgaatccaactttccc-----gggaaaggattaacctttcccatgtgaaatgcca 37374822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 41459204 - 41459138
Alignment:
Q  21 cttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  41459204 cttcacttaatctaatcattgaatc-aactttctcatggtgggaaaggattaacctttcccatgtgaa 41459138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 47737673 - 47737739
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacct 76  Q
    |||||||||||||||||||||| |||||||| |||||||| ||| |||||||||||| |||||||||    
T  47737673 aagaatatgttcttcacttaatctaatcattgaatccaacattcccatggtgggaaatgattaacct 47737739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 50675128 - 50675206
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    ||||||||||||||||||| |||||||| ||| |||||||| ||| |||  ||||||||||||||||| ||||||||||    
T  50675128 aatatgttcttcacttaatctaatcattgaattcaactttcccattgtgaaaaaggattaacctttcccatgtgaaatg 50675206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 48219235 - 48219319
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||| ||| ||||||||| |||||||| ||||||| |||| ||||||| ||||| |||||||||||| |||| ||||||||    
T  48219235 aagaatatattcatcacttaatctaatcattgaatccaattttcccatggtgagaaagaattaacctttcccatgtaaaatgcca 48219319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 24220665 - 24220587
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| | |||||| ||||||| |||  |||||| |||||| |||||||||||| |||||||    
T  24220665 aagaatatgttcttcacttaatctgatcattgaatccaatttttccatggtaggaaagaattaacctttcccatgtgaa 24220587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 48218677 - 48218599
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||| |||||||||| |||||||| |||||||||||  ||| |||||||| ||||||||||||  |||||||    
T  48218677 aagaatatgttattcacttaatctaatcattgaatccaacttttccatagtgggaaaagattaacctttctcatgtgaa 48218599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 19555923 - 19556004
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatc---caactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| ||||   | |||||| |||| ||||||||||||||||||||  |||||||    
T  19555923 aagaatatgttcttcacttaatctaatcattgaatcctactactttcccatgatgggaaaggattaacctttctcatgtgaa 19556004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 37374609 - 37374684
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||||||||||| |||||||| ||||||||||||  ||| ||||||| | ||||| ||||| |||||||    
T  37374609 aatatgttcttcacttaatctaatcattgaatccaactttcctatgatgggaaaaggttaacatttcccatgtgaa 37374684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 38575642 - 38575684
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaacttt 52  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  38575642 aagaatatgttcttcacttaatttaatcattgaatccaacttt 38575684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 43658895 - 43658943
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatg 58  Q
    |||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  43658895 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 43658943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 24221172 - 24221215
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttc 53  Q
    |||||| ||||||||||||||| |||||||||||||||||||||    
T  24221172 aagaatgtgttcttcacttaatataatcattaaatccaactttc 24221215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 49752913 - 49752968
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaagg 68  Q
    ||||| ||||||||||||| |||||||| |||||||||||| |||||| |||||||    
T  49752913 aatatattcttcacttaatctaatcattgaatccaactttcccatggtaggaaagg 49752968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 29342993 - 29343035
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaacttt 52  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  29342993 aagaatatgttcttcacttaatctaatcattgaatccaacttt 29343035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 41875616 - 41875666
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggt 60  Q
    |||||||||||||||||||||| |||||||| || ||||||||| ||||||    
T  41875616 aagaatatgttcttcacttaatctaatcattgaacccaactttcccatggt 41875666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 47737149 - 47737080
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcc 80  Q
    ||||||||||||| |||||||| ||||| || |||||||||| | || |||||||||||| ||||||||||    
T  47737149 aagaatatgttctccacttaatctaatcgttgaatccaacttaccca-ggtgggaaaggaataacctttcc 47737080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 32672783 - 32672824
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactt 51  Q
    ||||||||||||||| |||||| |||||||||||||||||||    
T  32672783 aagaatatgttcttcgcttaatctaatcattaaatccaactt 32672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 38575107 - 38575059
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatg 58  Q
    |||||||||||||||| ||||| |||||||| |||||||||||| ||||    
T  38575107 aagaatatgttcttcatttaatctaatcattgaatccaactttcccatg 38575059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 49752973 - 49753009
Alignment:
Q  58 ggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||||||||||||||||||| |||||||||||||    
T  49752973 ggtgggaaaggattaacctttcccatgtgaaatgcca 49753009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 53269393 - 53269429
Alignment:
Q  55 catggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    |||||||||||||||||||||||||| ||||||||||    
T  53269393 catggtgggaaaggattaacctttcccatgtgaaatg 53269429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 41040620 - 41040573
Alignment:
Q  47 aactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||| |||||||| ||||||||| |||||||| |||||||||||||    
T  41040620 aactttttcatggtgagaaaggattcacctttcccatgtgaaatgcca 41040573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 49752359 - 49752316
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttc 53  Q
    |||||||||||||||||||||| |||||||| ||||| ||||||    
T  49752359 aagaatatgttcttcacttaatctaatcattgaatcctactttc 49752316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 50674707 - 50674637
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||| |||||||| ||||     |||||||||||| |||||||||||| ||||||||||||  |||||||    
T  50674707 aatatgttctacacttaatctaat-----aatccaactttcccatggtgggaaaagattaacctttctcatgtgaa 50674637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 50687182 - 50687124
Alignment:
Q  16 atgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaac 74  Q
    ||||| |||||||||| |||| ||| |||||||||||||||| |||| |||| ||||||    
T  50687182 atgttattcacttaatctaattattgaatccaactttctcatagtggaaaagtattaac 50687124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 38279458 - 38279417
Alignment:
Q  47 aactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||| ||||||||||||||||| |||||||| |||||||    
T  38279458 aactttcccatggtgggaaaggattcacctttcccatgtgaa 38279417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 43103985 - 43103928
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaag 67  Q
    ||||||||||| ||||||||||  |||| || ||||||||||||  ||||||||||||    
T  43103985 aagaatatgttattcacttaatccaatcgttgaatccaactttcctatggtgggaaag 43103928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 40887941 - 40887981
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaact 50  Q
    |||||||||||||||||||||| |||||||| ||| |||||    
T  40887941 aagaatatgttcttcacttaatctaatcattgaatacaact 40887981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 5e-31; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 4386960 - 4387044
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  4386960 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgcca 4387044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 9224352 - 9224268
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  9224352 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgcca 9224268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 7716757 - 7716673
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||| |||||||||||||    
T  7716757 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacatttcccatgtgaaatgcca 7716673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 20244171 - 20244255
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  20244171 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaaatgcca 20244255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 28223874 - 28223790
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| ||||||||||||  ||||||||||||||||||||||||| |||||||||||||    
T  28223874 aagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtgggaaaggattaacctttcccatgtgaaatgcca 28223790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 28224388 - 28224466
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  28224388 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 28224466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 16571204 - 16571123
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    ||||||||||| |||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  16571204 aagaatatgtttttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatg 16571123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 6849371 - 6849296
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  6849371 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 6849296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 7583218 - 7583140
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||    
T  7583218 aagaatatgttcttcacctaatctaatcattgaatccaattttctcatggtgggaaaggattaacctttccgatgtgaa 7583140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 10883373 - 10883295
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  10883373 aagaatatgttctttacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 10883295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 16887669 - 16887591
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| ||||||||| || |||||||||||||||||||||||||| |||||||    
T  16887669 aagaatatgttcttcacttaatctaatcattgaatccaactatcccatggtgggaaaggattaacctttcccatgtgaa 16887591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 6849545 - 6849626
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||| | |||| ||||||||    
T  6849545 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgtaaaatgcca 6849626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 7583793 - 7583877
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||  |||||||| |||||||||||| ||| |||||||| ||||||||||||| |||||||||||||    
T  7583793 aagaatatgttcttcacttaagctaatcattgaatccaactttcccatagtgggaaaagattaacctttcccatgtgaaatgcca 7583877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 8113300 - 8113383
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcc 93  Q
    ||||||||||||||||| |||| |||||||  |||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  8113300 aagaatatgttcttcacataatctaatcatcgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaaatgcc 8113383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 3595332 - 3595254
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||||||||||| || |||||||| |||||||||||| ||||||||||||| |||||||||||| |||||||    
T  3595332 aagaatatgttcttcactttatctaatcattgaatccaactttcccatggtgggaaagaattaacctttcccatgtgaa 3595254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 16903092 - 16903170
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| |||| |||||    
T  16903092 aatatgttattcacttaatctaatcattgaatccaactttctcatggtggaaaaggattaacctttcccatgtaaaatg 16903170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 39477325 - 39477395
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcc 80  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||| |||||||||||||    
T  39477325 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcc 39477395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 40166846 - 40166920
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtga 87  Q
    ||||||||||| ||||||| |||||||| ||||||| |||| |||||||||||||||||||||||||||||||||    
T  40166846 aatatgttcttgacttaatctaatcattgaatccaattttcccatggtgggaaaggattaacctttcctatgtga 40166920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 11256740 - 11256824
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||||||||||| ||| ||||||||||| | |||| ||||||||    
T  11256740 aagaatatattcttcacttaatctaatcattgaatccaactttctcatggtggaaaatgattaaccttttccatgtaaaatgcca 11256824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 30162019 - 30161935
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||  |||| ||||||||||||||| ||||| | |||||||||||    
T  30162019 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatgatgggaaaggattaacttttcccacgtgaaatgcca 30161935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 7717285 - 7717362
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| ||||||| |||||||||||||||||| |||||||    
T  7717285 aagaatatgttcttcacttaatataatcattgaatc-aactttcccatggtgagaaaggattaacctttcccatgtgaa 7717362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 11256202 - 11256124
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||||||||||  ||||||| |||| ||||||||||||| |||||||    
T  11256202 aagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtgagaaatgattaacctttcccatgtgaa 11256124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 16571726 - 16571804
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||||||||||| || |||||||| ||||||| |||| |||| ||||||||||||||||||||| |||||||    
T  16571726 aagaatatgttcttcacttgatctaatcattgaatccaattttcccatgatgggaaaggattaacctttcccatgtgaa 16571804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 8963587 - 8963506
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||| |||||||||| |||||||| |||||||||||| |||| | | ||||||||||||||||| |||||||||||||    
T  8963587 aatatgtttttcacttaatctaatcattgaatccaactttcccatgatagaaaaggattaacctttcccatgtgaaatgcca 8963506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 467191 - 467134
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaag 67  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||    
T  467191 aagaatatgttcttcacttaatttaatcattgaatccaactttcccatggtggaaaag 467134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 33847959 - 33847870
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgccatccaa 99  Q
    |||||||||||||||||||||| ||||  || |||||| ||||| |||||||| ||||||||  ||||||| ||||||||||||| ||||    
T  33847959 aagaatatgttcttcacttaatctaattgttgaatccatctttcccatggtggaaaaggattggcctttcccatgtgaaatgccacccaa 33847870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 20243639 - 20243579
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggat 70  Q
    |||||||| ||||||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  20243639 aagaatatattcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggat 20243579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 467341 - 467411
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcc 80  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||| ||| ||||| ||| |||||||||||||    
T  467341 aagaatatgttcttcacttaatttaattattgaattcaactttttcacggtggaaaatgattaacctttcc 467411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 12206839 - 12206793
Alignment:
Q  45 ccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  12206839 ccaactttctcatggtgggaaaggattaacctttcccatgtgaaatg 12206793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 3595895 - 3595976
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    ||||||||||| |||||||||| |||||||| |||||||||||  |||| ||  ||||||||||| ||||| ||||||||||    
T  3595895 aagaatatgtttttcacttaatctaatcattgaatccaacttttccatgatgaaaaaggattaacatttcccatgtgaaatg 3595976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 40165959 - 40165878
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    ||||||||||||||||||||||  ||||||| |||||||||||| |||||||| ||| ||||   |||||| ||||||||||    
T  40165959 aagaatatgttcttcacttaatccaatcattgaatccaactttcccatggtggaaaatgattggtctttcccatgtgaaatg 40165878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 39476601 - 39476534
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctt 77  Q
    |||||||| ||||||||||||| |||||||| |||  ||||||| ||| |||||||||||||||||||    
T  39476601 aagaatatattcttcacttaatctaatcattgaattaaactttcccatagtgggaaaggattaacctt 39476534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 8112754 - 8112688
Alignment:
Q  22 ttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||| |||||||| |||||||||||| ||||||| |||||||||||| ||||  |||||||    
T  8112754 ttcacttaatctaatcattgaatccaactttcccatggtgagaaaggattaacatttctcatgtgaa 8112688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 4386418 - 4386363
Alignment:
Q  33 taatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||| ||||||||||||  |||||||||||| |||||||||||| |||||||    
T  4386418 taatcattgaatccaactttcctatggtgggaaagtattaacctttcccatgtgaa 4386363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 18950534 - 18950579
Alignment:
Q  49 ctttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||| |||||||||||||||||||||||| | || ||||||||||    
T  18950534 ctttcccatggtgggaaaggattaaccttttccatatgaaatgcca 18950579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 43743842 - 43743883
Alignment:
Q  50 tttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    |||| ||||||||||||||||| |||||||| ||||||||||    
T  43743842 tttcccatggtgggaaaggattcacctttcccatgtgaaatg 43743883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 15233 - 15317
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  15233 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgtgaaatgcca 15317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 36682921 - 36682837
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||| ||||||||||||| |||||||||||||    
T  36682921 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaaatgcca 36682837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 42456007 - 42455923
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| | |||||||||||||||||||||||| |||||||||||||    
T  42456007 aagaatatgttcttcacttaatttaatcattgaatccaattttcccgtggtgggaaaggattaacctttcccatgtgaaatgcca 42455923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 27855651 - 27855568
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||||||||||||| ||||||||||||| |||||||||||||    
T  27855651 aagaatatgttcttcacttaatctaatcattgaatc-aactttctcatggtgggaaatgattaacctttcccatgtgaaatgcca 27855568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 36683467 - 36683542
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  36683467 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 36683542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 42456519 - 42456594
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  42456519 aatatgttcttcacttaatgtaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 42456594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 34853477 - 34853399
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| ||| |||||||| |||||||||||||||||||||||||| |||||||    
T  34853477 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcccatgtgaa 34853399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 47814635 - 47814713
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||| |||||| |||||||    
T  47814635 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaagctttcccatgtgaa 47814713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 19816895 - 19816975
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcc 93  Q
    ||||||||||||||||||| |||||||| |||||||||||| |||||||| ||||||||||||||||| || |||||||||    
T  19816895 aatatgttcttcacttaatctaatcatttaatccaactttcccatggtggaaaaggattaacctttcccatatgaaatgcc 19816975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 47814057 - 47813973
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||  |||||||||||||||||||||||||| |  ||||||||||    
T  47814057 aagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccacatgaaatgcca 47813973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 4895082 - 4895165
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcc 93  Q
    |||||||||||||||||||||| |||| ||| |||||||||||| |||||||| ||| ||||||||||||| ||||||||||||    
T  4895082 aagaatatgttcttcacttaatctaataattgaatccaactttcccatggtggaaaatgattaacctttcccatgtgaaatgcc 4895165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 4894585 - 4894515
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcc 80  Q
    |||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  4894585 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcc 4894515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 19816350 - 19816272
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||| | |||||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  19816350 aagaatatgttttacacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 19816272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 24044043 - 24044121
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||  ||||||| |||||||||||||||||||||||||| |||||||    
T  24044043 aagaatatgttcttcacttaatctaatcattgaataaaactttcccatggtgggaaaggattaacctttcccatgtgaa 24044121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 22276079 - 22276156
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaat 90  Q
    ||||||||||||| ||||| |||||||| |||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  22276079 aatatgttcttcatttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtaaaat 22276156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 34853996 - 34854077
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    |||||||||||||||||||||| |||||||| | || |||||||  ||||||||||||||||||||||||| ||||||||||    
T  34853996 aagaatatgttcttcacttaatctaatcattgactctaactttcctatggtgggaaaggattaacctttcccatgtgaaatg 34854077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 46732653 - 46732569
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||||||| |||||||||| |||||||| |||||||||||  ||| ||||||||| |||||||||||| |||||||||||||    
T  46732653 aagaatatgttattcacttaatctaatcattgaatccaacttttccatagtgggaaagaattaacctttcccatgtgaaatgcca 46732569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 46814491 - 46814416
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgt 85  Q
    |||||||||||||||||||||| ||||| || ||| |||||||| |||||||||||||||||||||||||| ||||    
T  46814491 aagaatatgttcttcacttaatctaatcgttgaattcaactttcccatggtgggaaaggattaacctttcccatgt 46814416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 46815062 - 46815145
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||| ||||| |||||||| |||||||||||| ||||||||||||  |||||| ||||| |||||||||||||    
T  46815062 aagaatatgttcttcatttaatctaatcattgaatccaactttcccatggtgggaaataattaacttttcc-atgtgaaatgcca 46815145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 22275510 - 22275433
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| ||| |||||||| |||||||||||| ||||||||||| | |||||||    
T  22275510 aagaatatgttcttcacttaatctaatcattgaat-caactttcccatggtgggaaatgattaaccttttccatgtgaa 22275433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 33806055 - 33805969
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgccatc 96  Q
    ||||||||||||||||||||||||||||||| |||||||||||  |||||||| ||| ||||   |||||| |||||||||| ||||    
T  33806055 aagaatatgttcttcacttaatttaatcattgaatccaacttttccatggtggaaaatgattggtctttcccatgtgaaatgtcatc 33805969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 36620201 - 36620120
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||||| | | ||| ||||||||||||| || ||||||||||    
T  36620201 aatatgtttttcacttaatttaatcattgaattcaactttctcatgatagaaaaagattaacctttcccatatgaaatgcca 36620120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 24323982 - 24324059
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||| ||| ||||||| |||| ||| |||||||| ||||||||||||| |||||||    
T  24323982 aagaatatgttcttcacttaatctaattattgaatccaa-tttcccatagtgggaaatgattaacctttcccatgtgaa 24324059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 30711874 - 30711796
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||| ||| |||||||||||  ||||||||||||  |||||||||| | |||||||    
T  30711874 aagaatatgttcttcacttaatctaataattgaatccaacttttccatggtgggaaaaaattaaccttttccatgtgaa 30711796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 32499872 - 32499936
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaac 74  Q
    |||||||||||||||||||||| |||||||| |||||||||||| | | ||||||||| ||||||    
T  32499872 aagaatatgttcttcacttaatctaatcattgaatccaactttcccgttgtgggaaagaattaac 32499936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 32499335 - 32499287
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatg 58  Q
    |||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  32499335 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 32499287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 18520943 - 18520900
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttc 53  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  18520943 aagaatatgttcttcacttaatctaatcattgaatccaactttc 18520900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 33806602 - 33806650
Alignment:
Q  45 ccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcc 93  Q
    |||||||||  |||||||||||||||| |||||||| ||||||||||||    
T  33806602 ccaactttccaatggtgggaaaggattgacctttcccatgtgaaatgcc 33806650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 94
Target Start/End: Original strand, 85094 - 85133
Alignment:
Q  55 catggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||||||||||||| |||||||| |||||||||||||    
T  85094 catggtgggaaaggattcacctttcccatgtgaaatgcca 85133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 27856162 - 27856208
Alignment:
Q  42 aatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||  |||||||||||| ||||||||||||| |||||||    
T  27856162 aatccaacttttccatggtgggaaatgattaacctttcccatgtgaa 27856208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 30422782 - 30422826
Alignment:
Q  49 ctttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||    
T  30422782 ctttctcatggtgggaaa-gattcacctttcccatgtgaaatgcca 30422826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 36620743 - 36620780
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaact 50  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  36620743 aatatgttcttcacttaatctaatcattgaatccaact 36620780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 1403126 - 1403042
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  1403126 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgtgaaatgcca 1403042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 6288204 - 6288295
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgccatccaaat 101  Q
    |||||||||||||||||||||| |||||||| ||||||||||   ||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  6288204 aagaatatgttcttcacttaatctaatcattgaatccaacttctccatggtgagaaaggattaacctttcccatgtgaaatgccacccaaat 6288295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 1403688 - 1403765
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  1403688 aagaatatgttcttcacttaatctaatcattgaatc-aactttcccatggtgggaaaggattaacctttcctatgtgaa 1403765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 8560242 - 8560152
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgccatccaaa 100  Q
    |||||||||||||||||||||| ||||| || |||||||| ||| |||||||| ||||||||||||||||| ||||||||||||| |||||    
T  8560242 aagaatatgttcttcacttaatctaatctttgaatccaacattcccatggtggaaaaggattaacctttcccatgtgaaatgccacccaaa 8560152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 27817006 - 27817088
Alignment:
Q  12 gaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||| |||||||| |||||||||||  ||||||||||||||||||||||| || |||||||||||||    
T  27817006 gaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaaccttacccatgtgaaatgcca 27817088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 49533829 - 49533751
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||||| ||||||||||    
T  49533829 aagaatatgttcttcacttaatctaatcattgaatccaactttcccgtggtgggaaaggattaaccttccctatgtgaa 49533751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 49534396 - 49534480
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||||||| || ||||||| |||||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  49534396 aagaatatgtttttaacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaaatgcca 49534480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 42839548 - 42839618
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcc 80  Q
    |||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  42839548 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcc 42839618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 43368276 - 43368206
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcc 80  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||| ||||||||||||||||||||||||||    
T  43368276 aagaatatgttcttcacttaatttaatcattgaatctaacattcccatggtgggaaaggattaacctttcc 43368206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 43368835 - 43368913
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||| |||||||||||| |||||||    
T  43368835 aagaatatgttcttcacttaatctaatcattgaatacaactttcccatggtgggaaagaattaacctttcccatgtgaa 43368913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 52859788 - 52859866
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| ||| |||||||| |||||| ||||||||||||||||||| |||||||    
T  52859788 aagaatatgttcttcacttaatctaatcattgaattcaactttcccatggttggaaaggattaacctttcccatgtgaa 52859866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 42839023 - 42838942
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    |||||||||||||||||||||| |||||||| | || ||||||| |||||||||||||||||||||||| | ||||||||||    
T  42839023 aagaatatgttcttcacttaatctaatcattgactctaactttcccatggtgggaaaggattaacctttaccatgtgaaatg 42838942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 7219648 - 7219725
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| ||||||| |||| |||| ||||||||||||||||||||| |||||||    
T  7219648 aagaatatgttcttcacttaatctaatcattgaatccaa-tttcccatgatgggaaaggattaacctttcccatgtgaa 7219725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 8560743 - 8560820
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| |||| ||||||  |||||||||||||||||||||||||| |||||||    
T  8560743 aagaatatgttcttcacttaatctaatcattgaatc-aacttttccatggtgggaaaggattaacctttcccatgtgaa 8560820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 27797203 - 27797125
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| |||||||| ||| |||| ||| |||||||||||||||||||||||| | |||||||    
T  27797203 aagaatatgttcttcacttaatctaatcattgaattcaaccttcccatggtgggaaaggattaaccttttccatgtgaa 27797125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 42839787 - 42839709
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    |||||||||||||||||||||| | |||||| | || ||||||| |||||||||||||||||||||||||| |||||||    
T  42839787 aagaatatgttcttcacttaatctgatcattgactctaactttcccatggtgggaaaggattaacctttcccatgtgaa 42839709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 27797736 - 27797817
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    |||||||||||||||||||||| |||||||| | || ||||||| ||| |||| ||||||||||||||||| ||||||||||    
T  27797736 aagaatatgttcttcacttaatctaatcattgactctaactttcccatagtggaaaaggattaacctttcccatgtgaaatg 27797817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 7782691 - 7782775
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||||||||||||||| ||  ||||||| |||||||||||| |||||| ||||||||||  ||||||| |||||||||||||    
T  7782691 aagaatatgttcttcacttgatccaatcattgaatccaactttcccatggtaggaaaggattggcctttcccatgtgaaatgcca 7782775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 48843666 - 48843588
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||| |||||||||| |||||||| ||||||||||||  |||||| |||| ||||||||||||| |||||||    
T  48843666 aagaatatgttattcacttaatataatcattgaatccaactttcctatggtgtgaaaagattaacctttcccatgtgaa 48843588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 42840316 - 42840388
Alignment:
Q  13 aatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgt 85  Q
    ||||||||||||||||||| |||||||| ||| |||||||| ||| |||| ||| ||||||||||||| ||||    
T  42840316 aatatgttcttcacttaatctaatcattgaattcaactttcccatagtggaaaatgattaacctttcccatgt 42840388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 51248483 - 51248553
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcc 80  Q
    |||||||||||||||||||||| |||| ||| |||| ||||||  ||||||||||||  ||||||||||||    
T  51248483 aagaatatgttcttcacttaatctaattattgaatcaaacttttccatggtgggaaaaaattaacctttcc 51248553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 48843962 - 48844010
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatg 58  Q
    |||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  48843962 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 48844010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 29148989 - 29148942
Alignment:
Q  47 aactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    ||||||| ||||||||||||||||||||||||||  ||| ||||||||    
T  29148989 aactttcccatggtgggaaaggattaacctttcccgtgttaaatgcca 29148942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 48369568 - 48369525
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttc 53  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||    
T  48369568 aagaatatgttcttcacttaatccaatcattgaatccaactttc 48369525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 37725465 - 37725423
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaacttt 52  Q
    |||||||||||||||||||||| |||| ||| |||||||||||    
T  37725465 aagaatatgttcttcacttaatctaatgattgaatccaacttt 37725423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 41563265 - 41563195
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcc 80  Q
    ||||||| |||||||| ||||| |||| ||| |||||||||||| |||||| | |||| |||||| |||||    
T  41563265 aagaatacgttcttcatttaatctaataattgaatccaactttcccatggtagaaaagaattaacatttcc 41563195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 41563792 - 41563833
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactt 51  Q
    |||||||||||||||||||||| |||| ||| ||||||||||    
T  41563792 aagaatatgttcttcacttaatctaataattgaatccaactt 41563833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 27934295 - 27934358
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaac 74  Q
    ||||||||||||||| |||||| ||||||||  ||||||||||| |||| ||| |||| ||||||    
T  27934295 aagaatatgttcttctcttaatctaatcatt-gatccaactttcccatgttggaaaagaattaac 27934358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 11351 - 11268
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatgcca 94  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||| ||||| ||||||||||||| |||||||||||||    
T  11351 aagaatatgttcttcacttaatctaatcattgaatccaactttcccatggt-ggaaaagattaacctttcccatgtgaaatgcca 11268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 11784 - 11865
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaaatg 91  Q
    |||||||||||||||||||||| | |||||| | || ||||||| |||||||||||||||||||||||| | ||||||||||    
T  11784 aagaatatgttcttcacttaatctgatcattgactctaactttcccatggtgggaaaggattaacctttaccatgtgaaatg 11865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 1571 - 1493
Alignment:
Q  10 aagaatatgttcttcacttaatttaatcattaaatccaactttctcatggtgggaaaggattaacctttcctatgtgaa 88  Q
    ||||||||||| |||||||||| |||||||| |||||||||||  ||||||| |||| |||||| |||||| |||||||    
T  1571 aagaatatgttattcacttaatctaatcattgaatccaacttttccatggtgcgaaatgattaagctttcccatgtgaa 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University