View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2756_high_2 (Length: 588)

Name: NF2756_high_2
Description: NF2756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2756_high_2
NF2756_high_2
[»] chr3 (23 HSPs)
chr3 (292-575)||(24680459-24680742)
chr3 (16-158)||(19435930-19436072)
chr3 (17-164)||(19423630-19423774)
chr3 (16-147)||(19413238-19413370)
chr3 (171-256)||(19435801-19435886)
chr3 (186-259)||(19413099-19413172)
chr3 (16-93)||(19333091-19333168)
chr3 (16-93)||(18143398-18143475)
chr3 (16-93)||(18021972-18022049)
chr3 (16-93)||(18115059-18115136)
chr3 (18-93)||(19374788-19374863)
chr3 (16-93)||(19398838-19398915)
chr3 (174-250)||(19423514-19423593)
chr3 (16-93)||(19460629-19460703)
chr3 (35-93)||(18102557-18102615)
chr3 (16-93)||(24494226-24494303)
chr3 (37-143)||(25462078-25462179)
chr3 (16-86)||(18145961-18146028)
chr3 (307-386)||(30129803-30129882)
chr3 (217-259)||(18107375-18107417)
chr3 (217-258)||(19379831-19379872)
chr3 (16-48)||(16653311-16653343)
chr3 (16-48)||(19012206-19012238)
[»] chr7 (2 HSPs)
chr7 (361-575)||(11829467-11829670)
chr7 (292-353)||(11830829-11830890)
[»] chr4 (5 HSPs)
chr4 (16-140)||(15531434-15531555)
chr4 (172-259)||(15529933-15530020)
chr4 (294-368)||(19876921-19876994)
chr4 (292-353)||(29632976-29633036)
chr4 (292-353)||(44168385-44168445)
[»] chr2 (1 HSPs)
chr2 (311-386)||(6310243-6310318)
[»] chr6 (1 HSPs)
chr6 (16-93)||(13667678-13667755)


Alignment Details
Target: chr3 (Bit Score: 236; Significance: 1e-130; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 292 - 575
Target Start/End: Original strand, 24680459 - 24680742
Alignment:
Q  292 agagtgatgataggtatacacacttaggtggcaaacccccattgtacaccccttatgtggcaatttttaattaatttgttaggggtaattttgtctattt 391  Q
    |||||||||| ||  |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24680459 agagtgatgacagaaatacacacttaggtggcaaacctccattatacactccttatgtggcaatttttaattaatttgttaggggtaattttgtctattt 24680558  T
Q  392 acactcacttctctctcttccttcccatcccatctctctcagaccgtctcctccaagttccaaccctcttccacctcatcatcttattatttcctgtcga 491  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24680559 acactcacttctctctcttccttcccatcctatctctctcagactgtctcctccaagttccaaccctcttccacctcatcatcttcttatttcctgtcga 24680658  T
Q  492 ccaccgtcatccaccaccgctgttcaccgtcgccgcttttcctcactaatcatccacgtcgccatttcaccatctcccacgttc 575  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  24680659 ccaccgtcatccaccaccgccgttcaccgtcgccgcttttcctcactaatcatccacgtcgccatctcaccatctctcacgttc 24680742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 19436072 - 19435930
Alignment:
Q  16 agaatggtcatcatgaataattgtttgaatcagatagaaagatctaattcaaatgagattatgatttgttaagagattcttgctagtgtggttaaataag 115  Q
    |||||||||||| ||||||||||||||||||||| |  ||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||| |||||    
T  19436072 agaatggtcatcttgaataattgtttgaatcagagaagaagatctaattcaaatgggattgtgacttgttaagagattcttgctagtgtggttatataag 19435973  T
Q  116 atgttggcacatgggaaagtttgaaaaatgcacgagaagactt 158  Q
    ||||||||||||| |||||||||||||||||||| ||||||||    
T  19435972 atgttggcacatgagaaagtttgaaaaatgcacgggaagactt 19435930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 17 - 164
Target Start/End: Complemental strand, 19423774 - 19423630
Alignment:
Q  17 gaatggtcatcatgaataattgtttgaatcagatagaaagatctaattcaaatgagattatgatttgttaagagattcttgctagtgtggttaaataaga 116  Q
    ||||| ||||||||||||||||||||||||||  |   |||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||    
T  19423774 gaatgatcatcatgaataattgtttgaatcagtga---agatctaattcaaatgaatttatgatttgttaagagattcttgctagtgtggttatataaga 19423678  T
Q  117 tgttggcacatgggaaagtttgaaaaatgcacgagaagacttgcaatt 164  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  19423677 tgttggcacatgggaaagtttgaaaaatgcacgggaagacttggaatt 19423630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 19413370 - 19413238
Alignment:
Q  16 agaatggtcatcatgaataattgtttgaatcagatagaaagatctaattcaaatgagattatgatttgttaagagattcttgct--agtgtggttaaata 113  Q
    ||||||||||||| |||||||||||||||||||| || |||||||| |||||||||| ||||||||||||||||||||||||||  |||||||||| |||    
T  19413370 agaatggtcatcacgaataattgtttgaatcagagaggaagatctagttcaaatgag-ttatgatttgttaagagattcttgctgtagtgtggttatata 19413272  T
Q  114 agatgttggcacatgggaaagtttgaaaaatgca 147  Q
    ||||||||||||||||||||||||||||||||||    
T  19413271 agatgttggcacatgggaaagtttgaaaaatgca 19413238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 171 - 256
Target Start/End: Complemental strand, 19435886 - 19435801
Alignment:
Q  171 atggggtctgattgttagaaatattaaatagctttaaataaaaagaaagactttgaaaaagtaggaaagacttggaattatagaat 256  Q
    |||||||||||||| |||||| |||||||||||  |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  19435886 atggggtctgattgatagaaaaattaaatagctccaaattaaaagtaagactttgaaaaagtaggaaagacttggaattatagaat 19435801  T

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Target: chr3; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 19413172 - 19413099
Alignment:
Q  186 tagaaatattaaatagctttaaataaaaagaaagactttgaaaaagtaggaaagacttggaattatagaatttc 259  Q
    |||||| |||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19413172 tagaaaaattaaatagcttcaaattaaaagaaagactttgaaaaagcaggaaagacttggaattatagaatttc 19413099  T

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Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 19333168 - 19333091
Alignment:
Q  16 agaatggtcatcatgaataattgtttgaatcagatagaaagatctaattcaaatgagattatgatttgttaagagatt 93  Q
    |||||||||||||||||||||||||||||||| | |  || |||||||||||||| ||||||||||||||| ||||||    
T  19333168 agaatggtcatcatgaataattgtttgaatcaaagaagaatatctaattcaaatgggattatgatttgttatgagatt 19333091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 18143475 - 18143398
Alignment:
Q  16 agaatggtcatcatgaataattgtttgaatcagatagaaagatctaattcaaatgagattatgatttgttaagagatt 93  Q
    |||||||||||||||||||||||||||||||||| |  || ||||||||||||||  ||||||| |||||| ||||||    
T  18143475 agaatggtcatcatgaataattgtttgaatcagagaagaatatctaattcaaatggaattatgagttgttatgagatt 18143398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 18022049 - 18021972
Alignment:
Q  16 agaatggtcatcatgaataattgtttgaatcagatagaaagatctaattcaaatgagattatgatttgttaagagatt 93  Q
    |||||| ||||| ||||||||||||||||||||| |  |||||||||||||| ||  |||||||||||||| ||||||    
T  18022049 agaatgatcatcgtgaataattgtttgaatcagagaagaagatctaattcaattggtattatgatttgttatgagatt 18021972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 18115136 - 18115059
Alignment:
Q  16 agaatggtcatcatgaataattgtttgaatcagatagaaagatctaattcaaatgagattatgatttgttaagagatt 93  Q
    |||||||||||||||||| ||||||||||||||| |  ||||| |||||||||||| | ||||||||| || ||||||    
T  18115136 agaatggtcatcatgaatgattgtttgaatcagagaagaagatgtaattcaaatgaaaatatgatttggtatgagatt 18115059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 19374863 - 19374788
Alignment:
Q  18 aatggtcatcatgaataattgtttgaatcagatagaaagatctaattcaaatgagattatgatttgttaagagatt 93  Q
    ||||||||| |||||||||||||||||||| | |  ||  ||||||||||||| ||||||||||||||| ||||||    
T  19374863 aatggtcatgatgaataattgtttgaatcaaagaagaatgtctaattcaaatgggattatgatttgttatgagatt 19374788  T

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Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 19398915 - 19398838
Alignment:
Q  16 agaatggtcatcatgaataattgtttgaatcagatagaaagatctaattcaaatgagattatgatttgttaagagatt 93  Q
    |||||||||||||||||||||||||||||||| | |  ||  ||||||||||||  ||||||||||| ||| ||||||    
T  19398915 agaatggtcatcatgaataattgtttgaatcaaagaagaatgtctaattcaaattggattatgatttattatgagatt 19398838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 19423593 - 19423514
Alignment:
Q  174 gggtctgattgttagaaatattaaata---gctttaaataaaaagaaagactttgaaaaagtaggaaagacttggaatta 250  Q
    ||||||||||| |||||||||||||||   |||  | || ||||| |||||||||| |||||||||||||||||||||||    
T  19423593 gggtctgattgatagaaatattaaatattagctccacattaaaagcaagactttgataaagtaggaaagacttggaatta 19423514  T

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Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 19460703 - 19460629
Alignment:
Q  16 agaatggtcatcatgaataattgtttgaatcagatagaaagatctaattcaaatgagattatgatttgttaagagatt 93  Q
    |||||||||||||||||| |||||||||||||||    ||||| |||||||||||| | ||||||||| || ||||||    
T  19460703 agaatggtcatcatgaatgattgtttgaatcaga---gaagatttaattcaaatgaaaatatgatttggtatgagatt 19460629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 18102615 - 18102557
Alignment:
Q  35 attgtttgaatcagatagaaagatctaattcaaatgagattatgatttgttaagagatt 93  Q
    ||||||||||||||| |  |||||||||||||||||| ||||||||||| || ||||||    
T  18102615 attgtttgaatcagagaagaagatctaattcaaatgaaattatgatttggtatgagatt 18102557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 24494226 - 24494303
Alignment:
Q  16 agaatggtcatcatgaataattgtttgaatcagatagaaagatctaattcaaatgagattatgatttgttaagagatt 93  Q
    |||||||||||||||||| ||| |||| || ||| |  ||||| ||||||||||| || |||||||||||| ||||||    
T  24494226 agaatggtcatcatgaatgattatttggattagaaaagaagatgtaattcaaatgggagtatgatttgttacgagatt 24494303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 37 - 143
Target Start/End: Complemental strand, 25462179 - 25462078
Alignment:
Q  37 tgtttgaatcagatagaaagatctaattcaaatgagattatgatttgttaagagattcttgctagtgtggttaaataagatgttggcacatgggaaagtt 136  Q
    |||||| |||||| |  ||||||||||| ||||| || |||||||||||||||||||    |||||||| ||| |||||||| |||  |||||||||| |    
T  25462179 tgtttggatcagagaagaagatctaatttaaatg-gagtatgatttgttaagagatt----ctagtgtgtttatataagatgctgggtcatgggaaagct 25462085  T
Q  137 tgaaaaa 143  Q
    |||||||    
T  25462084 tgaaaaa 25462078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 18146028 - 18145961
Alignment:
Q  16 agaatggtcatcatgaataattgtttgaatcagatagaaagatctaattcaaatgagattatgatttgtta 86  Q
    ||||| |||||||||||| |||||||||||| || |   ||||||||||||||||  ||||||||||||||    
T  18146028 agaatagtcatcatgaatgattgtttgaatctgaga---agatctaattcaaatggtattatgatttgtta 18145961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 386
Target Start/End: Complemental strand, 30129882 - 30129803
Alignment:
Q  307 atacacacttaggtggcaaacccccattgtacaccccttatgtggcaatttttaattaatttg-ttaggggtaattttgtc 386  Q
    ||||||| |||| || |||| |||| ||||||||||| ||||||||| ||||||||||||||  ||| |||||||||||||    
T  30129882 atacacatttagctgacaaatcccctttgtacaccccatatgtggca-tttttaattaattttattaagggtaattttgtc 30129803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 18107417 - 18107375
Alignment:
Q  217 aagactttgaaaaagtaggaaagacttggaattatagaatttc 259  Q
    ||||||||||||| | | |||||||||||||||||||||||||    
T  18107417 aagactttgaaaaggcaagaaagacttggaattatagaatttc 18107375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 19379872 - 19379831
Alignment:
Q  217 aagactttgaaaaagtaggaaagacttggaattatagaattt 258  Q
    ||||||||||||| | | ||||||||||||||||||||||||    
T  19379872 aagactttgaaaaggcaagaaagacttggaattatagaattt 19379831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 16653311 - 16653343
Alignment:
Q  16 agaatggtcatcatgaataattgtttgaatcag 48  Q
    |||||||||||||||||||||||| ||||||||    
T  16653311 agaatggtcatcatgaataattgtatgaatcag 16653343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 19012206 - 19012238
Alignment:
Q  16 agaatggtcatcatgaataattgtttgaatcag 48  Q
    |||||||||||||||||||||||| ||||||||    
T  19012206 agaatggtcatcatgaataattgtatgaatcag 19012238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 2e-63; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 361 - 575
Target Start/End: Complemental strand, 11829670 - 11829467
Alignment:
Q  361 attaatttgttaggggtaattttgtctatttacactcacttctctctcttccttcccatcccatctctctcagaccgtctcctccaagttccaaccctct 460  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||          |||||||||||||||||||| |||    
T  11829670 attaatttgttaggggtaattttatctatttacactcacttctctctcttccttcccatctcttct----------gtctcctccaagttccaaccgtct 11829581  T
Q  461 tccacctcatcatcttattatttcctgtcgaccaccgtcatccaccaccgctgttcaccgtcgccgcttttcctcactaatcatccacgtcgccatttca 560  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||  | |||||||||| || ||||||||||||||||||||||||||| |||    
T  11829580 tccaccccatcatcttcttatttcctgtcgaccaccgtcatccaccaccgc-ctccaccgtcgccactcttcctcactaatcatccacgtcgccatctca 11829482  T
Q  561 ccatctcccacgttc 575  Q
    ||||||| |||||||    
T  11829481 ccatctctcacgttc 11829467  T

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Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 11830890 - 11830829
Alignment:
Q  292 agagtgatgataggtatacacacttaggtggcaaacccccattgtacaccccttatgtggca 353  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  11830890 agagtgatgataggtatgcacacttaggtggcaaacccccattgtacacccctcatgtggca 11830829  T

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Target: chr4 (Bit Score: 71; Significance: 7e-32; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 15531555 - 15531434
Alignment:
Q  16 agaatggtcatcatgaataattgtttgaatcagatagaaagatctaattcaaatgagattatgatttgttaagagattcttgctagtgtggttaaataag 115  Q
    ||||||||||| |||||  |||||||| |||||| |   |||||||||||||||| |||||||||||  ||||||||||| ||||||||||||| |||||    
T  15531555 agaatggtcattatgaaggattgtttggatcagaga---agatctaattcaaatgggattatgatttactaagagattctagctagtgtggttatataag 15531459  T
Q  116 atgttggcacatgggaaagtttgaa 140  Q
    |||||||||||||||||||||||||    
T  15531458 atgttggcacatgggaaagtttgaa 15531434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 15530020 - 15529933
Alignment:
Q  172 tggggtctgattgttagaaatattaaatagctttaaataaaaagaaagactttgaaaaagtaggaaagacttggaattatagaatttc 259  Q
    |||| |||||||||| |||| |||||||||||  |||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  15530020 tgggatctgattgtttgaaaaattaaatagctccaaattaaaagcaagactttgaaaaaggaggaaagacttggaattatacaatttc 15529933  T

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Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 368
Target Start/End: Original strand, 19876921 - 19876994
Alignment:
Q  294 agtgatgataggtatacacacttaggtggcaaacccccattgtacacccct-tatgtggcaatttttaattaattt 368  Q
    |||||||||||| | |||  |||||||||||||||||| |||||||||||| |||||||| |||||||||||||||    
T  19876921 agtgatgataggcaaacaaccttaggtggcaaaccccc-ttgtacacccctctatgtggc-atttttaattaattt 19876994  T

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Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 29632976 - 29633036
Alignment:
Q  292 agagtgatgataggtatacacacttaggtggcaaacccccattgtacaccccttatgtggca 353  Q
    ||||||||||||| |||||||||| | |||||||| | ||||| ||||||||||||||||||    
T  29632976 agagtgatgatagatatacacactaatgtggcaaa-caccattctacaccccttatgtggca 29633036  T

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Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 44168445 - 44168385
Alignment:
Q  292 agagtgatgataggtatacacacttaggtggcaaacccccattgtacaccccttatgtggca 353  Q
    |||||| |||||  |||||||||||| ||||||||| || ||| ||||||||||||||||||    
T  44168445 agagtggtgatacatatacacacttatgtggcaaacacc-attctacaccccttatgtggca 44168385  T

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Target: chr2 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 6310318 - 6310243
Alignment:
Q  311 acacttaggtggcaaacccccattgtacaccccttatgtggcaatttttaattaatttg-ttaggggtaattttgtc 386  Q
    |||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||||  ||| |||||||||||||    
T  6310318 acacttagctggcaaaccccctttgtacaccccatatgtggca-tttttaattaattttattaagggtaattttgtc 6310243  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 13667678 - 13667755
Alignment:
Q  16 agaatggtcatcatgaataattgtttgaatcagatagaaagatctaattcaaatgagattatgatttgttaagagatt 93  Q
    ||||| ||||||||||||||||||||||  |||| |  ||||||||||||||||  | ||||||||||| | ||||||    
T  13667678 agaattgtcatcatgaataattgtttgacccagagaagaagatctaattcaaatatggttatgatttgtgatgagatt 13667755  T

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