View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2761_high_19 (Length: 351)
Name: NF2761_high_19
Description: NF2761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2761_high_19 |
 |  |
|
| [»] chr4 (12 HSPs) |
 |  |
|
| [»] scaffold0802 (1 HSPs) |
 |  |  |
|
| [»] scaffold0319 (1 HSPs) |
 |  |  |
|
| [»] scaffold1221 (1 HSPs) |
 |  |  |
|
| [»] scaffold0192 (1 HSPs) |
 |  |  |
|
| [»] scaffold0110 (1 HSPs) |
 |  |  |
|
| [»] scaffold0002 (1 HSPs) |
 |  |  |
|
| [»] scaffold0598 (1 HSPs) |
 |  |  |
|
| [»] scaffold0001 (1 HSPs) |
 |  |  |
|
| [»] scaffold0015 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 114; Significance: 9e-58; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 6373379 - 6373492
Alignment:
| Q |
238 |
caagaacaaatatgtttaacaaataatgttagtcactctttccaaagaaaaacatctataaaaatgaaattatatatccaaaacaagtataagcagatca |
337 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6373379 |
caagaacaaatatgtttaacaaataatgttagtcactctttccaaagaaaaacatctataaaaatgaaattatatatccaaaacaagtataagcagatca |
6373478 |
T |
 |
| Q |
338 |
aggcaagaacaaat |
351 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
6373479 |
aggcaagaacaaat |
6373492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 6373255 - 6373357
Alignment:
| Q |
140 |
aagattaaattatagaaggattaaaattaggtttagattaaattgaaatttagctttaagaaactaaaacacacttaattttctttaattttcatcatca |
239 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
6373255 |
aagattaaattgtagaaggattaaaattaggtttagattaaattgaaatttagctttaagaaaccaaaacacacttaattttctttaattttcatcatca |
6373354 |
T |
 |
| Q |
240 |
aga |
242 |
Q |
| |
|
||| |
|
|
| T |
6373355 |
aga |
6373357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 11241578 - 11241688
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcac |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
11241578 |
cgcacaattagcaaaaagataaggggcaaaagtgaaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcccac |
11241677 |
T |
 |
| Q |
101 |
aattggcaaaa |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
11241678 |
aattggcaaaa |
11241688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3930368 - 3930462
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
3930368 |
cgcacaattagcaaaaagataagggacaaaagtgcaattggacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
3930462 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 16555705 - 16555799
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
16555705 |
cgcacaattagcaaaaagataagggggaaaagtgcaattgaacacaaagatggggtgtaaaatcagaaagggggcaaaaagatggggtgcaaaat |
16555799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 5206147 - 5206250
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcac |
100 |
Q |
| |
|
|||||||||||| ||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||| |
|
|
| T |
5206147 |
cgcacaattagcaaaaagatagggggaagaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatagggtgcaaaatcgcac |
5206246 |
T |
 |
| Q |
101 |
aatt |
104 |
Q |
| |
|
|||| |
|
|
| T |
5206247 |
aatt |
5206250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 13198770 - 13198676
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13198770 |
cgcacaattagaaaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
13198676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 22681745 - 22681652
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |
|
|
| T |
22681745 |
cgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatggggtgcaaaattagaaa-ggggcaaaaagatggggtgcaaaat |
22681652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 35393642 - 35393545
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgc |
98 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||||| |||| |||||||||||||||||| |
|
|
| T |
35393642 |
cgcacaattagcaaaaagatagggggcaaaagttcaattgaacacaaagatagggtgcaaaatcaaaaagggggtaaaaagatggggtgcaaaattgc |
35393545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 8488349 - 8488278
Alignment:
| Q |
2 |
gcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggg |
73 |
Q |
| |
|
||||||||||| ||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
8488349 |
gcacaattagcaaaaacatagggggcaaaagtgcaattgaacacaaagacggggtgcaaaatcagaaagggg |
8488278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 27304905 - 27304983
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaa |
79 |
Q |
| |
|
|||||||||||| ||||||| |||| |||||||||||||||| |||| |||||||||||||||||||| ||||||||| |
|
|
| T |
27304905 |
cgcacaattagcaaaaagatagggggaaaaagtgcaattgaactcaaatatggggtgcaaaatcagaaaaggggcaaaa |
27304983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 49178682 - 49178636
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaa |
47 |
Q |
| |
|
||||||||| || ||||||| ||||||||||||||||||||||||| |
|
|
| T |
49178682 |
cgcacaattggcaaaaagatagggggcaaaagtgcaattgaacacaa |
49178636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 14)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 8108910 - 8109020
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcac |
100 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||| |
|
|
| T |
8108910 |
cgcacaattagcaaaaagatatggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcaaaaagggggcaaaaagatggggtgcaaaatcgcac |
8109009 |
T |
 |
| Q |
101 |
aattggcaaaa |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
8109010 |
aattggcaaaa |
8109020 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 17518492 - 17518588
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgc |
98 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
17518492 |
cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagat-gggtgcaaaattgc |
17518588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 41083074 - 41082980
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
41083074 |
cgcacaattagtaaaaagataaggggcaaaagtacaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
41082980 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 47955472 - 47955378
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
47955472 |
cgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
47955378 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 22149590 - 22149683
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
22149590 |
cgcacaattagcaaaaagataaggggcaaaagtgcaattaaacacaaagatggggtgcaaaatcagaaa-ggggcaaaaagatggggtgcaaaat |
22149683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 48190848 - 48190798
Alignment:
| Q |
60 |
aaatcagaaagggggcaaaaggatggggtgcaaaattgcacaattggcaaaa |
111 |
Q |
| |
|
|||| |||||||||| ||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
48190848 |
aaattagaaagggggaaaaag-atggggtgcaaaatcgcacaattggcaaaa |
48190798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 24671318 - 24671281
Alignment:
| Q |
76 |
aaaaggatggggtgcaaaattgcacaattggcaaaaaa |
113 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
24671318 |
aaaaggatggagtgcaaaatcgcacaattggcaaaaaa |
24671281 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 110
Target Start/End: Original strand, 4692431 - 4692459
Alignment:
| Q |
82 |
atggggtgcaaaattgcacaattggcaaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
4692431 |
atggggtgcaaaattgcacaattggcaaa |
4692459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 110
Target Start/End: Original strand, 6703892 - 6703920
Alignment:
| Q |
82 |
atggggtgcaaaattgcacaattggcaaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
6703892 |
atggggtgcaaaattgcacaattggcaaa |
6703920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 110
Target Start/End: Original strand, 9347549 - 9347577
Alignment:
| Q |
82 |
atggggtgcaaaattgcacaattggcaaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
9347549 |
atggggtgcaaaattgcacaattggcaaa |
9347577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 110
Target Start/End: Complemental strand, 32162785 - 32162757
Alignment:
| Q |
82 |
atggggtgcaaaattgcacaattggcaaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
32162785 |
atggggtgcaaaattgcacaattggcaaa |
32162757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 39690872 - 39690825
Alignment:
| Q |
59 |
aaaatcagaaagggggcaaaaggatggggtgcaaaattgcacaattggc |
107 |
Q |
| |
|
|||||||||||||| | |||||||| ||||||||||| ||||||||||| |
|
|
| T |
39690872 |
aaaatcagaaagggag-aaaaggatagggtgcaaaatcgcacaattggc |
39690825 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 110
Target Start/End: Original strand, 46824276 - 46824304
Alignment:
| Q |
82 |
atggggtgcaaaattgcacaattggcaaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
46824276 |
atggggtgcaaaattgcacaattggcaaa |
46824304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 48191333 - 48191382
Alignment:
| Q |
60 |
aaatcagaaagggggcaaaaggatggggtgcaaaattgcacaattggcaaaa |
111 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||||| |||| |||||||||| |
|
|
| T |
48191333 |
aaatcagaaagggggaaaa--gatggggtgcaaaatcgcaccattggcaaaa |
48191382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0802 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0802
Description:
Target: scaffold0802; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 1308 - 1402
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
1308 |
cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
1402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 6585 - 6679
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
6585 |
cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
6679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 16)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 15156073 - 15156167
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
15156073 |
cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
15156167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 37752280 - 37752186
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
37752280 |
cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
37752186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 43246037 - 43245943
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
43246037 |
cgcacaattagcaaaaagataaggggcaaaagtgtaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
43245943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12281290 - 12281196
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
12281290 |
cgcacagttagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatctgaaagggggcaaaaagatggggtgcaaaat |
12281196 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 41662291 - 41662385
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
41662291 |
cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagataaggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
41662385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 765886 - 765806
Alignment:
| Q |
15 |
aaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
765886 |
aaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatctgaaagggggcaaaaagatggggtgcaaaat |
765806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 43162425 - 43162521
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattg |
97 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| |
|
|
| T |
43162425 |
cgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgaggtgcaaaattg |
43162521 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 16929091 - 16929013
Alignment:
| Q |
15 |
aaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaa |
94 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
16929091 |
aaagataaggggcaaaagtgcaatt-aacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaa |
16929013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 34313955 - 34314046
Alignment:
| Q |
4 |
acaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
34313955 |
acaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaaaggggcaaaaagatggggtgcaaaat |
34314046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 74887 - 74967
Alignment:
| Q |
15 |
aaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
||||||| ||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
74887 |
aaagataggggacaaaagtgcaattaaacacaaagatgtggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
74967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18019953 - 18019875
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaa |
79 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
18019953 |
cgcacaattaggaaaaagatagggggcaaaagtgcaattgaacacaaagatgcggtgcaaaatcagaaagggggcaaaa |
18019875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 7127843 - 7127940
Alignment:
| Q |
5 |
caattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcacaa |
102 |
Q |
| |
|
|||||||| ||||||| |||| ||||||||||||||||||||| ||||| |||||||||||||| |||| |||| ||| ||||||||||| |||||| |
|
|
| T |
7127843 |
caattagcaaaaagatagggggtaaaagtgcaattgaacacaaaaatgggatgcaaaatcagaaaaggggtaaaaagatagggtgcaaaatcgcacaa |
7127940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9465738 - 9465675
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc |
64 |
Q |
| |
|
|||||| ||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
9465738 |
cgcacagttagcaaaaagatagggggcaaaagtgcaattgaacacaaagatagggtgcaaaatc |
9465675 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 37670169 - 37670221
Alignment:
| Q |
27 |
caaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaa |
79 |
Q |
| |
|
||||| ||||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
37670169 |
caaaaatgcaattaaacacaaagatggggtgctaaatcagaaagggggcaaaa |
37670221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 33748196 - 33748236
Alignment:
| Q |
23 |
ggggcaaaagtgcaattgaacacaaagatggggtgcaaaat |
63 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
33748196 |
ggggcaaaagtgcaattgaacacaaagatgaggtgcaaaat |
33748236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 43597956 - 43597892
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatca |
65 |
Q |
| |
|
|||||||||||| ||||||| |||||||||| ||||||||||||||| || | |||||||||| |
|
|
| T |
43597956 |
cgcacaattagcaaaaagatagggggcaaaagcacaattgaacacaaagttgagatgcaaaatca |
43597892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3403877 - 3403971
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
3403877 |
cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
3403971 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 18242044 - 18242138
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
18242044 |
cgcacaattaacaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
18242138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 30388252 - 30388346
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
30388252 |
cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggtaaaaagatggggtgcaaaat |
30388346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 2762649 - 2762555
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||| |
|
|
| T |
2762649 |
cgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcaaaaagggggcaaaaagatgaggtgcaaaat |
2762555 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 13579541 - 13579634
Alignment:
| Q |
2 |
gcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
||||||||||| ||| ||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||| |
|
|
| T |
13579541 |
gcacaattagcaaaaatatagggggcaaaagtgcaattgaacacaaatatggggtgcaaaataagaaaggggccaaaaaaatggggtgcaaaat |
13579634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10039855 - 10039918
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc |
64 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10039855 |
cgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc |
10039918 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 11656646 - 11656583
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc |
64 |
Q |
| |
|
|||||||||| | || |||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11656646 |
cgcacaattatcaaaacgatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc |
11656583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 33972203 - 33972249
Alignment:
| Q |
3 |
cacaattagctgaaagataaggggcaaaagtgcaattgaacacaaag |
49 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
33972203 |
cacaattagcaaaaagatatggggcaaaagtgcaattgaacacaaag |
33972249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 18433181 - 18433087
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
18433181 |
cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
18433087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25115923 - 25115829
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
25115923 |
cgcacaattagcaaaatgataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
25115829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25175015 - 25174921
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
25175015 |
cgcacaattagcaaaatgataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
25174921 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 34577031 - 34576937
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
34577031 |
cgcacaattagcaaaaagataaggggcaaaagtgcaattaaacacaaagatggggtggaaaatcagaaagggggcaaaaagatggggtgcaaaat |
34576937 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 22429138 - 22429223
Alignment:
| Q |
26 |
gcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcacaattggcaaaa |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||| |
|
|
| T |
22429138 |
gcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgcacaattagcaaaa |
22429223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 5187688 - 5187574
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcac |
100 |
Q |
| |
|
|||| ||||||| ||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||| |||| |
|
|
| T |
5187688 |
cgcataattagcaaaaagataggggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaaggggacaaaaagatggggtgcaaaatcgcac |
5187589 |
T |
 |
| Q |
101 |
aattggcaaaaaata |
115 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
5187588 |
gattagcaaaaaata |
5187574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 9665692 - 9665582
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcac |
100 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
9665692 |
cgcacaattagcaaaaagatagggggcaaaaacacaattgaacacaaagatgaggtgcaaaatcagaaagggagcaaaaagatggggtgcaaaattgcac |
9665593 |
T |
 |
| Q |
101 |
aattggcaaaa |
111 |
Q |
| |
|
|||| |||||| |
|
|
| T |
9665592 |
aattagcaaaa |
9665582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 26020616 - 26020522
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
26020616 |
cgcacaattaacaaaaagataagggacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatgcggtgcaaaat |
26020522 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 5779750 - 5779844
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||| | | |||||||||||||||||||||| ||| | ||||||||||||||| || |||| ||||| |||||||| |
|
|
| T |
5779750 |
cgcacaattagcaaaaagataggagacaaaagtgcaattgaacacaaaaatgagatgcaaaatcagaaagaggaaaaaaagatggaatgcaaaat |
5779844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 6171345 - 6171442
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgc |
98 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
6171345 |
cgcacaattaacaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaattgc |
6171442 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11883789 - 11883692
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgc |
98 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||| |
|
|
| T |
11883789 |
cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcataaagggggcaaaaagatgaggtgcaaaattgc |
11883692 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 20347352 - 20347446
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
20347352 |
cgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatggggtgcaaaat |
20347446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 30191089 - 30190995
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
30191089 |
cgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
30190995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 32673031 - 32673125
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||| |
|
|
| T |
32673031 |
cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagagggcgaaaagatggggtgcaaaat |
32673125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 40469617 - 40469711
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
40469617 |
cgcacaattagcaaaacgataagggggaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
40469711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 26737668 - 26737763
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaatt-gaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
26737668 |
cgcacaattagcaaaaagatagggggcaaaagtgcaatttgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgtaaaat |
26737763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 15920923 - 15920991
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaa |
69 |
Q |
| |
|
|||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15920923 |
cgcacaattagcaaaaagttagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaa |
15920991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 17345897 - 17345803
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||| | ||| ||| ||||||||||||||||||||||||||||||| ||||||||||| || |||| ||||| ||| ||||||||||| |
|
|
| T |
17345897 |
cgcacaattaacaaaaatatagggggcaaaagtgcaattgaacacaaagatggagtgcaaaatcaaaagggggccaaaaagatagggtgcaaaat |
17345803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 40221500 - 40221563
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc |
64 |
Q |
| |
|
|||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
40221500 |
cgcacaattagcaaaaagatagggggcaaaagcgcaattgaacacaaagatggggtgcaaaatc |
40221563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 18296670 - 18296720
Alignment:
| Q |
60 |
aaatcagaaagggggcaaaaggatggggtgcaaaattgcacaattggcaaaa |
111 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
18296670 |
aaatcagaaagggggaaaaag-atggggtgcaaaatcgcacaattggcaaaa |
18296720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1221 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold1221
Description:
Target: scaffold1221; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 1647 - 1537
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcac |
100 |
Q |
| |
|
|||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||| |
|
|
| T |
1647 |
cgcacaattagcaaaaagataagagacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaataagatggggtgcaaaatcacac |
1548 |
T |
 |
| Q |
101 |
aattggcaaaa |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
1547 |
aattggcaaaa |
1537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0192 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0192
Description:
Target: scaffold0192; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 25257 - 25351
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
25257 |
cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaatggggcaaaaagatggggtgcaaaat |
25351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 79; Significance: 7e-37; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 18875055 - 18874961
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
18875055 |
cgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
18874961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 20968908 - 20969002
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
20968908 |
cgcacaattagcaaaatgataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
20969002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 10293773 - 10293680
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10293773 |
cgcacaattaacaaaaagataaggggcaaaagtgcaattgaacacaaagat-gggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
10293680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9026898 - 9026805
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
9026898 |
cgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagacggggggcaaaatcagaaaggggg-aaaaagatggggtgcaaaat |
9026805 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 3644755 - 3644795
Alignment:
| Q |
24 |
gggcaaaagtgcaattgaacacaaagatggggtgcaaaatc |
64 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
3644755 |
gggcaaaagtgcaattaaacacaaagatggggtgcaaaatc |
3644795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 21895736 - 21895657
Alignment:
| Q |
59 |
aaaatcagaaagggggcaaaaggatggggtgcaaaattgcacaattggcaaaaaatannnnnnnaaaagtgcaattaagcc |
139 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| |||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
21895736 |
aaaatcagaaaggggaaaaaag-atggggtgcaaaatcacacaattggcaaaacatagtggggaaaaagtgcaattaagcc |
21895657 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 110
Target Start/End: Original strand, 47666333 - 47666361
Alignment:
| Q |
82 |
atggggtgcaaaattgcacaattggcaaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
47666333 |
atggggtgcaaaattgcacaattggcaaa |
47666361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0110 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0110
Description:
Target: scaffold0110; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 45695 - 45789
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
45695 |
cgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
45789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3687545 - 3687639
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
3687545 |
cgcacaattagcaaaaaaataagggacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat |
3687639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 9412213 - 9412307
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
9412213 |
cgcacagttagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatctgaaagggggcaaaaagatggggtgcaaaat |
9412307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 35080140 - 35080243
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcac |
100 |
Q |
| |
|
||||||||||||| ||||||| |||||||||| |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||| |||| |
|
|
| T |
35080140 |
cgcacaattagcttaaagatagggggcaaaagcacaattgaacacaaagatgaggtgcaaaatcagaaaggaggcaaaaagatggggtgcaaaatcgcac |
35080239 |
T |
 |
| Q |
101 |
aatt |
104 |
Q |
| |
|
|||| |
|
|
| T |
35080240 |
aatt |
35080243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 6908402 - 6908515
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcac |
100 |
Q |
| |
|
|||||||||||| ||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| |||| |
|
|
| T |
6908402 |
cgcacaattagcaaaaagatagggggtaaaagcgcaattgaacacaaagatggggtgcaaaatcagaaaggaggcaaaaagat-gggtgcaaaatcgcac |
6908500 |
T |
 |
| Q |
101 |
aattggcaaaaaata |
115 |
Q |
| |
|
|||| |||||||||| |
|
|
| T |
6908501 |
aattagcaaaaaata |
6908515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 5349664 - 5349753
Alignment:
| Q |
15 |
aaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcacaatt |
104 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| |
|
|
| T |
5349664 |
aaagatagggggcaaaagtgcaattgaatacaaagatggggtgcaaaatcagaaagggggtaaaaagatggggtgcaaaatcgcacaatt |
5349753 |
T |
 |
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Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13772803 - 13772881
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaa |
79 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||| |||||| |
|
|
| T |
13772803 |
cgcacaattagcaaaaagataaggggcaaaagtgtaattgaacacaaagatggggtgaaaaattagaaagggtgcaaaa |
13772881 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 15567179 - 15567255
Alignment:
| Q |
3 |
cacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaa |
79 |
Q |
| |
|
|||||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
15567179 |
cacaattagcaaaaagagagggggcaaacgtgcaattgaacacaaagatggggtgcaaaatcagaaagggtgcaaaa |
15567255 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 34235881 - 34235961
Alignment:
| Q |
15 |
aaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| || || ||||||||| |
|
|
| T |
34235881 |
aaagatagggggcaaaagtgcaattaaacacaaagatggggtgcagaatcagaaatggggcaaaaagacggcgtgcaaaat |
34235961 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 33628543 - 33628466
Alignment:
| Q |
2 |
gcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaa |
79 |
Q |
| |
|
||||||||||| ||||||| || ||||| |||||||||||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
33628543 |
gcacaattagcaaaaagatagggtgcaaatgtgcaattgaacacaaggatggggtgcaaaatcagaaagggtgcaaaa |
33628466 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 29291982 - 29292025
Alignment:
| Q |
52 |
ggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||| ||||||||||| |
|
|
| T |
29291982 |
ggggtgcaaaatcagaaatggggcaaaaagatagggtgcaaaat |
29292025 |
T |
 |
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Target: scaffold0002 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 412087 - 411993
Alignment:
| Q |
1 |
cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
412087 |
cgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatagggtgcaaaatcagaaagggggcaaaaagatagggtgcaaaat |
411993 |
T |
 |
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Target: scaffold0598 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0598
Description:
Target: scaffold0598; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 6768 - 6850
Alignment:
| Q |
6 |
aattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggt |
88 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
6768 |
aattagcaaaaaaataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggagcaaaaagatggggt |
6850 |
T |
 |
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Target: scaffold0001 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 439063 - 439001
Alignment:
| Q |
2 |
gcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc |
64 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
439063 |
gcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc |
439001 |
T |
 |
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Target: scaffold0015 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 17005 - 16925
Alignment:
| Q |
15 |
aaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat |
95 |
Q |
| |
|
||||||| ||| |||||||||||||||||| ||||| || |||||||||||||||||| | |||| ||||||||||||||| |
|
|
| T |
17005 |
aaagataggggacaaaagtgcaattgaacaaaaagacggagtgcaaaatcagaaagggaggaaaaagatggggtgcaaaat |
16925 |
T |
 |
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