View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2761_low_12 (Length: 488)

Name: NF2761_low_12
Description: NF2761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2761_low_12
NF2761_low_12
[»] chr8 (74 HSPs)
chr8 (52-289)||(13906500-13906737)
chr8 (51-192)||(10161947-10162088)
chr8 (62-180)||(1032564-1032677)
chr8 (61-179)||(41454816-41454929)
chr8 (66-192)||(1360111-1360231)
chr8 (61-192)||(4259852-4259978)
chr8 (203-289)||(10162112-10162198)
chr8 (206-289)||(11919139-11919222)
chr8 (61-192)||(44828408-44828535)
chr8 (61-128)||(30466672-30466739)
chr8 (64-192)||(38289211-38289334)
chr8 (68-192)||(39104607-39104725)
chr8 (355-423)||(13904493-13904561)
chr8 (60-192)||(22652675-22652802)
chr8 (62-192)||(5904350-5904475)
chr8 (355-423)||(13906313-13906383)
chr8 (69-191)||(43456630-43456746)
chr8 (65-131)||(41845461-41845527)
chr8 (80-192)||(43413862-43413969)
chr8 (61-192)||(19733045-19733171)
chr8 (61-180)||(38063970-38064084)
chr8 (66-130)||(36103955-36104019)
chr8 (61-180)||(23139067-23139183)
chr8 (363-423)||(11919351-11919410)
chr8 (64-182)||(45536714-45536827)
chr8 (61-192)||(36587626-36587752)
chr8 (68-129)||(40103522-40103583)
chr8 (61-192)||(8350429-8350556)
chr8 (75-175)||(279990-280084)
chr8 (75-175)||(635768-635862)
chr8 (75-175)||(821571-821665)
chr8 (61-126)||(12831563-12831628)
chr8 (72-186)||(19957303-19957412)
chr8 (64-124)||(29114098-29114158)
chr8 (203-242)||(32328141-32328180)
chr8 (69-110)||(38544977-38545018)
chr8 (70-192)||(8349459-8349576)
chr8 (89-192)||(31153505-31153604)
chr8 (67-192)||(11052560-11052680)
chr8 (77-132)||(16973031-16973086)
chr8 (62-132)||(11875884-11875953)
chr8 (62-132)||(11890891-11890960)
chr8 (64-126)||(12927802-12927864)
chr8 (60-130)||(13059182-13059251)
chr8 (62-132)||(23178894-23178963)
chr8 (61-99)||(32822109-32822147)
chr8 (68-126)||(33820432-33820490)
chr8 (64-114)||(34037997-34038047)
chr8 (64-191)||(3311436-3311558)
chr8 (62-130)||(16449123-16449190)
chr8 (62-130)||(26022245-26022312)
chr8 (68-112)||(40444705-40444749)
chr8 (60-177)||(10201254-10201366)
chr8 (61-132)||(11231417-11231487)
chr8 (61-132)||(12770365-12770435)
chr8 (68-131)||(30623294-30623356)
chr8 (61-112)||(31220337-31220388)
chr8 (138-177)||(38402732-38402771)
chr8 (62-132)||(2792777-2792846)
chr8 (70-132)||(5328570-5328631)
chr8 (62-132)||(10736877-10736946)
chr8 (62-132)||(24458315-24458384)
chr8 (62-132)||(29716858-29716927)
chr8 (64-110)||(31821084-31821130)
chr8 (62-132)||(34413060-34413129)
chr8 (70-132)||(34894375-34894436)
chr8 (68-132)||(2787084-2787147)
chr8 (61-129)||(2908097-2908164)
chr8 (68-128)||(14583200-14583260)
chr8 (62-126)||(20540115-20540178)
chr8 (64-132)||(22274614-22274681)
chr8 (68-132)||(30300333-30300396)
chr8 (61-132)||(37708687-37708758)
chr8 (88-132)||(44444567-44444611)
[»] chr6 (59 HSPs)
chr6 (51-289)||(15716889-15717125)
chr6 (61-192)||(6228236-6228362)
chr6 (51-175)||(5948848-5948973)
chr6 (61-192)||(18903343-18903469)
chr6 (154-289)||(30260677-30260812)
chr6 (154-289)||(20821624-20821758)
chr6 (71-192)||(19748102-19748217)
chr6 (62-185)||(20415545-20415663)
chr6 (63-192)||(17216953-17217077)
chr6 (67-192)||(24794871-24794991)
chr6 (61-192)||(4854282-4854408)
chr6 (65-192)||(25045737-25045863)
chr6 (61-192)||(29321952-29322078)
chr6 (323-423)||(30260827-30260927)
chr6 (355-423)||(173856-173924)
chr6 (355-423)||(20821431-20821499)
chr6 (203-289)||(5949006-5949092)
chr6 (355-423)||(15716702-15716772)
chr6 (64-192)||(30422084-30422207)
chr6 (61-192)||(3974435-3974560)
chr6 (61-192)||(11552864-11552990)
chr6 (64-192)||(1128392-1128518)
chr6 (62-160)||(21874230-21874322)
chr6 (68-186)||(7954904-7955018)
chr6 (75-188)||(9357163-9357271)
chr6 (61-132)||(18618570-18618641)
chr6 (64-180)||(31637340-31637451)
chr6 (62-132)||(9435624-9435693)
chr6 (62-115)||(28536216-28536269)
chr6 (64-182)||(19221696-19221809)
chr6 (145-192)||(9763506-9763553)
chr6 (62-128)||(4408356-4408421)
chr6 (64-192)||(11611354-11611488)
chr6 (389-423)||(13000715-13000749)
chr6 (63-132)||(2251837-2251905)
chr6 (62-130)||(6210052-6210119)
chr6 (61-129)||(7273044-7273112)
chr6 (61-129)||(24466825-24466892)
chr6 (62-130)||(30885575-30885642)
chr6 (64-132)||(32611557-32611624)
chr6 (60-131)||(20568289-20568359)
chr6 (138-176)||(1194696-1194734)
chr6 (62-132)||(1968994-1969063)
chr6 (65-107)||(3200139-3200181)
chr6 (139-192)||(5757847-5757901)
chr6 (62-132)||(7207842-7207911)
chr6 (62-132)||(10934597-10934666)
chr6 (62-132)||(15091446-15091515)
chr6 (62-132)||(17441842-17441911)
chr6 (62-132)||(19953831-19953900)
chr6 (148-192)||(3200059-3200104)
chr6 (136-192)||(5641666-5641723)
chr6 (62-131)||(7545327-7545395)
chr6 (68-129)||(15963949-15964009)
chr6 (61-130)||(32670059-32670127)
chr6 (68-132)||(3294768-3294831)
chr6 (65-93)||(4096633-4096661)
chr6 (62-130)||(7177293-7177360)
chr6 (62-130)||(8857088-8857155)
[»] chr5 (64 HSPs)
chr5 (51-289)||(12375286-12375524)
chr5 (52-289)||(15696191-15696428)
chr5 (62-185)||(31250141-31250259)
chr5 (154-288)||(36037474-36037607)
chr5 (154-289)||(7671823-7671958)
chr5 (61-192)||(38503233-38503359)
chr5 (62-181)||(43227860-43227974)
chr5 (154-289)||(11784847-11784984)
chr5 (154-289)||(30487085-30487222)
chr5 (67-192)||(17077360-17077480)
chr5 (64-192)||(42208913-42209035)
chr5 (355-423)||(15696535-15696603)
chr5 (356-423)||(7671660-7671727)
chr5 (355-423)||(30487342-30487410)
chr5 (355-423)||(36037258-36037326)
chr5 (355-423)||(16437916-16437986)
chr5 (60-192)||(4395827-4395954)
chr5 (61-181)||(15470608-15470723)
chr5 (61-192)||(5039674-5039799)
chr5 (73-191)||(1572115-1572228)
chr5 (355-423)||(11785117-11785185)
chr5 (61-128)||(930973-931040)
chr5 (70-192)||(5263171-5263288)
chr5 (73-192)||(33545363-33545476)
chr5 (61-129)||(461999-462067)
chr5 (61-114)||(42643852-42643908)
chr5 (64-132)||(15106918-15106986)
chr5 (203-242)||(17087068-17087107)
chr5 (203-242)||(17087279-17087318)
chr5 (61-127)||(87784-87850)
chr5 (61-126)||(31991798-31991863)
chr5 (61-114)||(43263206-43263259)
chr5 (203-242)||(3517790-3517829)
chr5 (388-423)||(12375113-12375148)
chr5 (61-104)||(13576316-13576359)
chr5 (85-191)||(26671600-26671701)
chr5 (85-191)||(26943197-26943298)
chr5 (61-103)||(1984249-1984291)
chr5 (62-132)||(6518779-6518848)
chr5 (62-132)||(17545175-17545244)
chr5 (90-132)||(29530796-29530838)
chr5 (65-114)||(15254204-15254253)
chr5 (67-132)||(16386744-16386808)
chr5 (77-174)||(34729481-34729572)
chr5 (61-132)||(3198324-3198394)
chr5 (62-129)||(21918050-21918116)
chr5 (62-132)||(4417688-4417757)
chr5 (62-132)||(8241048-8241117)
chr5 (62-132)||(9835031-9835100)
chr5 (68-126)||(12256524-12256582)
chr5 (62-132)||(12463754-12463823)
chr5 (62-132)||(12891555-12891624)
chr5 (62-132)||(13621949-13622018)
chr5 (68-192)||(20191442-20191560)
chr5 (62-132)||(32505686-32505755)
chr5 (61-126)||(3294076-3294141)
chr5 (136-192)||(15680877-15680934)
chr5 (65-114)||(39405309-39405358)
chr5 (62-131)||(41477362-41477430)
chr5 (68-132)||(6489008-6489071)
chr5 (68-132)||(8968753-8968816)
chr5 (68-112)||(9628117-9628161)
chr5 (69-137)||(24033082-24033149)
chr5 (68-132)||(35515516-35515579)
[»] scaffold0018 (1 HSPs)
scaffold0018 (52-289)||(121674-121910)
[»] chr4 (83 HSPs)
chr4 (51-289)||(13210039-13210276)
chr4 (64-192)||(16556447-16556570)
chr4 (154-289)||(39719683-39719819)
chr4 (62-185)||(40406943-40407062)
chr4 (154-289)||(45281951-45282087)
chr4 (61-192)||(46283115-46283241)
chr4 (154-289)||(45630496-45630635)
chr4 (203-289)||(35012554-35012640)
chr4 (61-192)||(50815700-50815826)
chr4 (64-186)||(36993037-36993154)
chr4 (61-192)||(51974740-51974866)
chr4 (61-132)||(27862862-27862933)
chr4 (69-192)||(11491195-11491313)
chr4 (61-169)||(23448966-23449068)
chr4 (355-423)||(35012355-35012423)
chr4 (355-423)||(45282173-45282241)
chr4 (65-192)||(45355694-45355817)
chr4 (65-192)||(45369435-45369558)
chr4 (61-192)||(37574266-37574391)
chr4 (65-192)||(48404113-48404235)
chr4 (61-183)||(2832056-2832173)
chr4 (355-423)||(45630754-45630822)
chr4 (64-192)||(26885376-26885499)
chr4 (62-186)||(38690660-38690779)
chr4 (64-171)||(43362165-43362267)
chr4 (66-192)||(42154564-42154685)
chr4 (65-185)||(45847909-45848024)
chr4 (78-173)||(22096386-22096476)
chr4 (65-191)||(37889583-37889704)
chr4 (65-128)||(52366204-52366267)
chr4 (61-111)||(8716442-8716492)
chr4 (75-191)||(25234835-25234946)
chr4 (61-111)||(41971351-41971401)
chr4 (65-114)||(35909078-35909127)
chr4 (61-110)||(49635425-49635474)
chr4 (61-113)||(8716547-8716599)
chr4 (64-115)||(39387474-39387525)
chr4 (65-128)||(51707117-51707180)
chr4 (81-131)||(24570223-24570273)
chr4 (68-192)||(13539816-13539933)
chr4 (61-113)||(25104320-25104372)
chr4 (68-136)||(29771298-29771365)
chr4 (62-130)||(48569181-48569248)
chr4 (203-242)||(20378686-20378725)
chr4 (65-178)||(43084444-43084552)
chr4 (62-132)||(8965092-8965161)
chr4 (62-132)||(49901480-49901549)
chr4 (67-128)||(19687629-19687690)
chr4 (75-132)||(24253139-24253196)
chr4 (62-127)||(37935859-37935923)
chr4 (136-192)||(44251303-44251360)
chr4 (62-130)||(3764013-3764080)
chr4 (387-423)||(13209995-13210031)
chr4 (62-130)||(25235802-25235869)
chr4 (387-423)||(39719552-39719588)
chr4 (156-187)||(19688851-19688882)
chr4 (64-123)||(22341902-22341961)
chr4 (68-127)||(29889814-29889873)
chr4 (61-132)||(56497605-56497675)
chr4 (145-182)||(2931135-2931173)
chr4 (62-132)||(6371112-6371181)
chr4 (62-132)||(9761113-9761182)
chr4 (62-132)||(11375892-11375961)
chr4 (70-132)||(21935483-21935544)
chr4 (62-132)||(23705156-23705225)
chr4 (62-132)||(26919471-26919540)
chr4 (64-114)||(31261753-31261803)
chr4 (62-132)||(43147387-43147456)
chr4 (62-132)||(43596893-43596962)
chr4 (62-132)||(46105533-46105602)
chr4 (62-132)||(46775033-46775102)
chr4 (62-132)||(47934075-47934144)
chr4 (62-132)||(55251354-55251423)
chr4 (140-177)||(21200596-21200633)
chr4 (62-127)||(24680094-24680158)
chr4 (61-130)||(46676497-46676565)
chr4 (68-132)||(3815064-3815127)
chr4 (68-132)||(22230437-22230500)
chr4 (61-125)||(33933749-33933812)
chr4 (62-130)||(44602483-44602550)
chr4 (68-132)||(50457717-50457780)
chr4 (136-192)||(54593738-54593794)
chr4 (61-137)||(55055913-55055988)
[»] chr3 (94 HSPs)
chr3 (51-289)||(36590373-36590610)
chr3 (54-289)||(30162643-30162876)
chr3 (154-289)||(23156515-23156650)
chr3 (61-192)||(33528181-33528307)
chr3 (63-192)||(47864631-47864755)
chr3 (64-192)||(39739270-39739393)
chr3 (154-289)||(23155869-23156003)
chr3 (62-185)||(25165434-25165556)
chr3 (154-289)||(35343595-35343729)
chr3 (154-289)||(53733894-53734031)
chr3 (203-289)||(33543709-33543795)
chr3 (61-192)||(11483606-11483732)
chr3 (61-192)||(46247253-46247381)
chr3 (154-289)||(31902842-31902979)
chr3 (61-185)||(50381707-50381826)
chr3 (60-192)||(55426106-55426229)
chr3 (61-192)||(27817044-27817169)
chr3 (62-174)||(29226320-29226427)
chr3 (61-192)||(46798575-46798701)
chr3 (355-423)||(33543924-33543992)
chr3 (355-423)||(36590740-36590808)
chr3 (355-423)||(37472471-37472539)
chr3 (65-172)||(34225192-34225296)
chr3 (61-130)||(2259150-2259219)
chr3 (77-192)||(27471513-27471623)
chr3 (362-423)||(35343857-35343918)
chr3 (355-422)||(53733696-53733763)
chr3 (61-192)||(166781-166907)
chr3 (61-192)||(29645803-29645933)
chr3 (61-182)||(985905-986021)
chr3 (75-192)||(31435477-31435589)
chr3 (65-192)||(9320935-9321057)
chr3 (61-192)||(16141329-16141455)
chr3 (73-192)||(22602179-22602293)
chr3 (62-192)||(27394502-27394626)
chr3 (61-128)||(32421341-32421408)
chr3 (61-131)||(8258145-8258215)
chr3 (68-130)||(31419583-31419645)
chr3 (60-192)||(49429453-49429579)
chr3 (62-131)||(7517934-7518003)
chr3 (363-423)||(23155688-23155746)
chr3 (91-192)||(44062018-44062113)
chr3 (73-128)||(33780308-33780363)
chr3 (75-192)||(38668135-38668247)
chr3 (61-186)||(45431620-45431740)
chr3 (61-127)||(42913431-42913497)
chr3 (61-114)||(1084077-1084130)
chr3 (72-192)||(1102672-1102787)
chr3 (62-130)||(6488122-6488189)
chr3 (62-130)||(19999865-19999932)
chr3 (62-130)||(22501936-22502003)
chr3 (387-423)||(23156765-23156801)
chr3 (387-423)||(30162976-30163012)
chr3 (74-130)||(37756446-37756502)
chr3 (57-129)||(53207960-53208031)
chr3 (388-423)||(11235630-11235665)
chr3 (75-192)||(1325307-1325420)
chr3 (61-99)||(50271723-50271761)
chr3 (61-114)||(7239799-7239852)
chr3 (62-130)||(25938935-25939002)
chr3 (61-129)||(45118637-45118704)
chr3 (62-130)||(48739749-48739816)
chr3 (62-130)||(53347295-53347362)
chr3 (62-129)||(882387-882453)
chr3 (77-116)||(33830415-33830454)
chr3 (72-131)||(38869223-38869282)
chr3 (68-130)||(2368940-2369001)
chr3 (62-132)||(3748605-3748674)
chr3 (62-132)||(7269953-7270022)
chr3 (62-132)||(17218486-17218555)
chr3 (60-130)||(28951712-28951781)
chr3 (62-132)||(31327504-31327573)
chr3 (62-132)||(31327721-31327790)
chr3 (62-132)||(32256557-32256626)
chr3 (62-132)||(34102614-34102683)
chr3 (62-132)||(37800614-37800683)
chr3 (62-132)||(40548301-40548370)
chr3 (62-132)||(40933834-40933903)
chr3 (70-132)||(41936410-41936471)
chr3 (62-132)||(45701342-45701411)
chr3 (68-130)||(47098736-47098797)
chr3 (62-132)||(50496817-50496886)
chr3 (62-132)||(53163592-53163661)
chr3 (68-192)||(54457153-54457272)
chr3 (136-192)||(8930953-8931010)
chr3 (68-129)||(9489477-9489538)
chr3 (61-130)||(21914070-21914138)
chr3 (138-174)||(40415556-40415593)
chr3 (68-132)||(4139004-4139067)
chr3 (63-131)||(6919967-6920034)
chr3 (61-129)||(25505701-25505768)
chr3 (68-132)||(32776215-32776278)
chr3 (62-130)||(34898772-34898839)
chr3 (68-132)||(39719939-39720002)
[»] chr1 (91 HSPs)
chr1 (52-289)||(27054674-27054914)
chr1 (62-185)||(24134607-24134725)
chr1 (61-192)||(34702289-34702415)
chr1 (65-192)||(43109214-43109336)
chr1 (154-286)||(34661096-34661228)
chr1 (64-192)||(47651868-47651990)
chr1 (60-192)||(15417793-15417920)
chr1 (203-289)||(46602406-46602492)
chr1 (61-181)||(2017672-2017786)
chr1 (61-192)||(49619965-49620091)
chr1 (61-176)||(50011500-50011610)
chr1 (203-289)||(15551007-15551093)
chr1 (203-289)||(48813803-48813889)
chr1 (61-192)||(40061436-40061562)
chr1 (61-186)||(50065003-50065123)
chr1 (64-192)||(14262697-14262820)
chr1 (64-192)||(48497189-48497312)
chr1 (355-423)||(34661355-34661423)
chr1 (64-192)||(7438617-7438740)
chr1 (60-130)||(22386269-22386339)
chr1 (64-192)||(47428871-47428994)
chr1 (65-192)||(10123029-10123150)
chr1 (78-185)||(25031480-25031582)
chr1 (61-183)||(8893853-8893970)
chr1 (67-192)||(30735827-30735947)
chr1 (60-192)||(4126891-4127018)
chr1 (72-192)||(19424050-19424165)
chr1 (61-192)||(12973254-12973380)
chr1 (61-130)||(25421847-25421916)
chr1 (73-182)||(50302837-50302941)
chr1 (56-108)||(15550874-15550926)
chr1 (61-113)||(39304253-39304305)
chr1 (61-185)||(3347686-3347805)
chr1 (64-192)||(23368708-23368831)
chr1 (62-192)||(16985911-16986027)
chr1 (52-108)||(48813718-48813774)
chr1 (61-108)||(35527390-35527437)
chr1 (62-116)||(25585353-25585407)
chr1 (356-405)||(46602153-46602202)
chr1 (64-182)||(12148559-12148672)
chr1 (61-129)||(47683646-47683714)
chr1 (64-174)||(52164365-52164470)
chr1 (203-242)||(33616543-33616582)
chr1 (57-192)||(49239823-49239946)
chr1 (61-181)||(4684164-4684279)
chr1 (62-132)||(7166230-7166299)
chr1 (355-397)||(15551224-15551266)
chr1 (355-397)||(48814006-48814048)
chr1 (68-128)||(27160495-27160555)
chr1 (80-182)||(42937215-42937312)
chr1 (62-129)||(3269617-3269683)
chr1 (61-128)||(24253678-24253745)
chr1 (60-192)||(29332278-29332403)
chr1 (61-132)||(33931185-33931256)
chr1 (61-96)||(35309718-35309753)
chr1 (61-96)||(35527568-35527603)
chr1 (87-192)||(42946443-42946543)
chr1 (203-242)||(50593383-50593422)
chr1 (68-130)||(19011359-19011420)
chr1 (62-132)||(21265654-21265723)
chr1 (62-132)||(22563384-22563453)
chr1 (62-132)||(25999848-25999917)
chr1 (62-132)||(33207203-33207272)
chr1 (61-192)||(25800309-25800435)
chr1 (136-192)||(29491532-29491586)
chr1 (70-130)||(2556562-2556621)
chr1 (63-127)||(17916702-17916766)
chr1 (62-130)||(18467203-18467270)
chr1 (67-178)||(21947191-21947296)
chr1 (62-130)||(48638530-48638597)
chr1 (142-182)||(50593499-50593539)
chr1 (68-99)||(40513237-40513268)
chr1 (62-132)||(1570195-1570264)
chr1 (62-132)||(6438067-6438136)
chr1 (62-132)||(6463039-6463108)
chr1 (68-130)||(11215005-11215066)
chr1 (143-192)||(15550938-15550988)
chr1 (62-132)||(15819604-15819673)
chr1 (62-132)||(42490413-42490482)
chr1 (62-132)||(46965738-46965807)
chr1 (62-132)||(50899513-50899582)
chr1 (63-132)||(16343027-16343095)
chr1 (63-132)||(36666579-36666647)
chr1 (68-132)||(2277758-2277821)
chr1 (88-132)||(7191055-7191099)
chr1 (136-191)||(29936658-29936714)
chr1 (60-132)||(31124641-31124712)
chr1 (62-130)||(40520828-40520895)
chr1 (88-136)||(40634224-40634272)
chr1 (62-130)||(45333717-45333783)
chr1 (62-130)||(51050188-51050255)
[»] scaffold0001 (1 HSPs)
scaffold0001 (59-192)||(419703-419831)
[»] chr7 (70 HSPs)
chr7 (154-289)||(36388598-36388733)
chr7 (61-192)||(48433686-48433812)
chr7 (154-289)||(25965033-25965167)
chr7 (61-177)||(40273814-40273925)
chr7 (61-183)||(23824577-23824693)
chr7 (61-192)||(31793461-31793587)
chr7 (65-181)||(12166079-12166190)
chr7 (65-189)||(42554631-42554750)
chr7 (61-192)||(38378212-38378338)
chr7 (64-192)||(27454007-27454131)
chr7 (81-192)||(4956068-4956174)
chr7 (355-423)||(36388862-36388930)
chr7 (61-177)||(24029978-24030089)
chr7 (61-192)||(3961384-3961510)
chr7 (60-192)||(33248778-33248905)
chr7 (62-132)||(42338278-42338348)
chr7 (61-130)||(1575687-1575756)
chr7 (363-423)||(25964838-25964898)
chr7 (60-131)||(3902306-3902376)
chr7 (59-130)||(26456038-26456109)
chr7 (62-189)||(43440683-43440805)
chr7 (61-132)||(14707286-14707356)
chr7 (61-132)||(36528250-36528321)
chr7 (61-128)||(46266661-46266728)
chr7 (73-192)||(28914853-28914968)
chr7 (61-122)||(34322065-34322126)
chr7 (61-130)||(44986587-44986656)
chr7 (61-191)||(15025149-15025274)
chr7 (61-127)||(8249698-8249764)
chr7 (68-192)||(23602274-23602393)
chr7 (68-130)||(24315386-24315448)
chr7 (66-192)||(3889776-3889898)
chr7 (61-181)||(37918673-37918788)
chr7 (136-192)||(32986407-32986463)
chr7 (64-186)||(48619793-48619909)
chr7 (61-132)||(46570002-46570073)
chr7 (61-192)||(5228064-5228189)
chr7 (68-192)||(9668792-9668909)
chr7 (62-130)||(25833553-25833620)
chr7 (61-113)||(28712361-28712413)
chr7 (60-182)||(37665736-37665853)
chr7 (68-132)||(44662494-44662558)
chr7 (62-132)||(9877270-9877339)
chr7 (62-132)||(15238887-15238956)
chr7 (62-132)||(23102561-23102630)
chr7 (64-130)||(25965742-25965808)
chr7 (155-192)||(1576388-1576425)
chr7 (144-192)||(33413902-33413951)
chr7 (77-192)||(48525586-48525696)
chr7 (156-192)||(10091433-10091469)
chr7 (64-104)||(10900070-10900110)
chr7 (154-190)||(34238814-34238850)
chr7 (61-129)||(47440816-47440884)
chr7 (62-130)||(47641043-47641110)
chr7 (62-129)||(19752974-19753040)
chr7 (68-99)||(38110246-38110277)
chr7 (67-110)||(41468835-41468878)
chr7 (68-99)||(46243291-46243322)
chr7 (139-177)||(10624789-10624827)
chr7 (62-132)||(21388521-21388590)
chr7 (62-128)||(27424837-27424902)
chr7 (62-132)||(29617403-29617472)
chr7 (68-130)||(30388512-30388573)
chr7 (92-128)||(7608758-7608794)
chr7 (62-130)||(12640594-12640661)
chr7 (68-132)||(24781034-24781097)
chr7 (68-132)||(32676945-32677008)
chr7 (68-132)||(34267554-34267617)
chr7 (68-132)||(36174394-36174457)
chr7 (68-132)||(46987087-46987150)
[»] chr2 (61 HSPs)
chr2 (154-289)||(32342604-32342738)
chr2 (61-192)||(34107488-34107613)
chr2 (63-186)||(18424134-18424249)
chr2 (61-192)||(3330177-3330303)
chr2 (61-192)||(41749940-41750065)
chr2 (203-289)||(30777833-30777923)
chr2 (355-423)||(32342398-32342466)
chr2 (62-192)||(43027149-43027274)
chr2 (67-192)||(33065233-33065353)
chr2 (154-249)||(4631988-4632083)
chr2 (355-423)||(4631817-4631885)
chr2 (61-129)||(11069379-11069447)
chr2 (62-192)||(31149078-31149202)
chr2 (61-186)||(19843345-19843465)
chr2 (65-115)||(16403522-16403572)
chr2 (80-192)||(17543066-17543173)
chr2 (64-192)||(18949661-18949783)
chr2 (70-192)||(6866510-6866627)
chr2 (61-127)||(25553181-25553247)
chr2 (65-129)||(27463560-27463624)
chr2 (204-289)||(30778107-30778196)
chr2 (61-132)||(24202143-24202214)
chr2 (63-192)||(29090411-29090534)
chr2 (64-131)||(32084841-32084908)
chr2 (79-191)||(5901808-5901915)
chr2 (61-131)||(43684272-43684341)
chr2 (64-182)||(42678310-42678423)
chr2 (203-242)||(3402571-3402610)
chr2 (203-242)||(3402782-3402821)
chr2 (60-99)||(41541579-41541618)
chr2 (62-128)||(33482677-33482743)
chr2 (74-130)||(466771-466827)
chr2 (68-186)||(25783196-25783308)
chr2 (61-191)||(40203256-40203381)
chr2 (62-132)||(19281606-19281675)
chr2 (62-132)||(28194630-28194699)
chr2 (62-132)||(33228936-33229005)
chr2 (142-192)||(34235852-34235902)
chr2 (62-131)||(19684071-19684139)
chr2 (63-132)||(34613978-34614046)
chr2 (62-99)||(38790145-38790182)
chr2 (77-192)||(42541165-42541274)
chr2 (68-132)||(3287059-3287122)
chr2 (138-181)||(6270495-6270539)
chr2 (62-130)||(8250306-8250373)
chr2 (138-192)||(41541516-41541571)
chr2 (62-132)||(11050760-11050829)
chr2 (59-129)||(23405191-23405260)
chr2 (62-132)||(25857298-25857367)
chr2 (64-130)||(31223620-31223685)
chr2 (62-132)||(40535452-40535521)
chr2 (73-130)||(1500970-1501026)
chr2 (68-137)||(6635965-6636033)
chr2 (68-129)||(15654869-15654929)
chr2 (68-129)||(27152354-27152414)
chr2 (142-189)||(3402678-3402726)
chr2 (72-132)||(17487712-17487771)
chr2 (68-132)||(36182646-36182709)
chr2 (68-132)||(41509520-41509583)
chr2 (156-192)||(42998718-42998754)
chr2 (68-132)||(44857237-44857300)
[»] scaffold0008 (1 HSPs)
scaffold0008 (209-287)||(122604-122685)
[»] scaffold0339 (2 HSPs)
scaffold0339 (203-242)||(12745-12784)
scaffold0339 (142-182)||(12648-12689)
[»] scaffold0121 (1 HSPs)
scaffold0121 (62-130)||(46524-46591)
[»] scaffold0108 (3 HSPs)
scaffold0108 (203-242)||(18224-18263)
scaffold0108 (203-242)||(18429-18468)
scaffold0108 (142-189)||(18325-18373)
[»] scaffold0128 (1 HSPs)
scaffold0128 (62-132)||(17618-17687)
[»] scaffold0088 (1 HSPs)
scaffold0088 (62-132)||(10829-10898)
[»] scaffold0204 (1 HSPs)
scaffold0204 (68-104)||(10576-10612)
[»] scaffold0519 (1 HSPs)
scaffold0519 (61-132)||(2965-3035)
[»] scaffold0054 (1 HSPs)
scaffold0054 (71-130)||(22462-22521)
[»] scaffold0024 (1 HSPs)
scaffold0024 (62-132)||(59781-59850)
[»] scaffold0460 (1 HSPs)
scaffold0460 (71-132)||(13206-13266)
[»] scaffold0072 (1 HSPs)
scaffold0072 (138-174)||(17727-17764)
[»] scaffold0036 (1 HSPs)
scaffold0036 (56-132)||(25014-25090)
[»] scaffold0007 (1 HSPs)
scaffold0007 (64-113)||(146769-146818)
[»] scaffold0366 (1 HSPs)
scaffold0366 (68-132)||(863-926)


Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 52 - 289
Target Start/End: Complemental strand, 13906737 - 13906500
Alignment:
Q  52 aaatatagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13906737 aaatatagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccgggcacggacacctcacttat 13906638  T
Q  152 tcattttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaaa 251  Q
    |||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13906637 tcattttaaggtgaatttctctagccactaggctatttgacaaaaaaaaaatataggagattttataattttaattggattctagattttactttgaaaa 13906538  T
Q  252 attactccaatatgaacaaattctagattttattttga 289  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13906537 attactccaatatgaacaaattctagattttattttga 13906500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 51 - 192
Target Start/End: Original strand, 10161947 - 10162088
Alignment:
Q  51 taaatatagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcactta 150  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  10161947 taaatatagggtccccatgagcttagctcatctggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccgggcacgggcacctcactta 10162046  T
Q  151 ttcattttaaggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||||||||||| || |||||    
T  10162047 ttcattttaaggtgaatttctctagccactaggttacttgac 10162088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 62 - 180
Target Start/End: Original strand, 1032564 - 1032677
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaa 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      | |||||| ||||||||||| |||||    
T  1032564 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc------cagacaccccacttattcatctttaa 1032657  T
Q  161 ggtgaatttctctagccact 180  Q
    ||||||||||||||||||||    
T  1032658 ggtgaatttctctagccact 1032677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 61 - 179
Target Start/End: Complemental strand, 41454929 - 41454816
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||      |||||||| ||||||||||| ||||    
T  41454929 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccc------cggacaccccacttattcatcttta 41454836  T
Q  160 aggtgaatttctctagccac 179  Q
    | ||||||||||||||||||    
T  41454835 atgtgaatttctctagccac 41454816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 1360231 - 1360111
Alignment:
Q  66 catgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcattttaaggtga 165  Q
    |||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||      |||||||| |||||||||||||||| ||||    
T  1360231 catgagcttagctcatttggcaaaggataatgcacaatatgtgtaggggctggggttcgaaccc------cggacaccccacttattcattttaaagtga 1360138  T
Q  166 atttctctagccactaggctatttgac 192  Q
    ||||||||| ||||||||||| |||||    
T  1360137 atttctctaaccactaggctacttgac 1360111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 4259852 - 4259978
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||      ||||| || ||||||||||| ||||    
T  4259852 gtccgcatgagcttaactcatttggtaagggataatgcacaatatgtgcaggggccggggttccaaccc------cggactccccacttattcatcttta 4259945  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||||| |||||    
T  4259946 aggtgaatttctctagccactaggctacttgac 4259978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 203 - 289
Target Start/End: Original strand, 10162112 - 10162198
Alignment:
Q  203 tataggagattttataattttaattggattctagattttactttgaaaaattactccaatatgaacaaattctagattttattttga 289  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||    
T  10162112 tataggagattttataattttaattggattctagattttagtttgaaaaattactagaatatgaacaaaatctagattttattttga 10162198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 206 - 289
Target Start/End: Original strand, 11919139 - 11919222
Alignment:
Q  206 aggagattttataattttaattggattctagattttactttgaaaaattactccaatatgaacaaattctagattttattttga 289  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  11919139 aggagattttataattttaattggattctatattttattttgaaaaattactcgaatatgaacaaaatctagattttattttga 11919222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 44828535 - 44828408
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca--tttt 158  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||      | |||||| ||||||||||  ||||    
T  44828535 gtccccatgagcttagctcatttggtaagggataatgcacaatttgtgcagggtctggggttcgaaccc------cagacaccacacttattcatctttt 44828442  T
Q  159 aaggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||| |||||| ||| ||| |||||    
T  44828441 aaggtgaatttctttagccattagactacttgac 44828408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 30466672 - 30466739
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacc 128  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30466672 gtccccatgagcttagctcatttggtaagggctaatgcacaatatgtgcaggggctggggttcgaacc 30466739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 64 - 192
Target Start/End: Complemental strand, 38289334 - 38289211
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 162  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||      | |  ||||| ||||||||||| |||||||    
T  38289334 cccataagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaac------ctcaaacaccccacttattcatctttaagg 38289241  T
Q  163 tgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||| |||| |||||    
T  38289240 tgaatttctctagccactaagctacttgac 38289211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 39104607 - 39104725
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaa 166  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||      |||||||| ||||||||||| ||||||||| |    
T  39104607 tgagtttagctcatttggtaagggataatgcacaatatgtgcagcggccggggttcgaaccc------cggacacc-cacttattcatctttaaggtgga 39104699  T
Q  167 tttctctagccactaggctatttgac 192  Q
    |||||||||||||||| ||| |||||    
T  39104700 tttctctagccactagactacttgac 39104725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 13904561 - 13904493
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13904561 ttattttttcggataatttttcaccgataaattatatatatattcgtcggagatcctaaattatccaat 13904493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 60 - 192
Target Start/End: Original strand, 22652675 - 22652802
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttt 158  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||| || ||||||||||      |||||||| || |||||||| ||     
T  22652675 ggtcaccatgagcttagctcatttgataagggataatgcataatttgtgcaggggccggtgttcgaaccc------cggacaccccaattattcatgtta 22652768  T
Q  159 aaggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||| |||| |||||    
T  22652769 aaggtgaatttctctagccactaagctacttgac 22652802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 5904475 - 5904350
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaa 160  Q
    ||||||| || ||||||||||||||||  ||||||||||||||||||||||||  |||||||||||||      |||||| | ||||||||||| |||||    
T  5904475 tccccataagtttagctcatttggtaaaagataatgcacaatatgtgcaggggacggggttcgaaccc------cggacatcccacttattcatctttaa 5904382  T
Q  161 ggtgaatttctctagccactaggctatttgac 192  Q
    | |||||||||||||| |||| ||||||||||    
T  5904381 gatgaatttctctagctactaagctatttgac 5904350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 13906383 - 13906313
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatat--atattcgtcggagatcctaaattatccaat 423  Q
    ||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  13906383 ttattttgtcggataatttttcaccgataaattatatatatatattcgtcggagatcctaaattatccaat 13906313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 43456746 - 43456630
Alignment:
Q  69 gagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcattttaaggtgaatt 168  Q
    ||||||||||||||||||||||||||||||||||||| || | |||  |||||||||||||      |||||||| ||||||||||||||||||||| ||    
T  43456746 gagcttagctcatttggtaagggataatgcacaatatatgtaagggtcggggttcgaaccc------cggacaccccacttattcattttaaggtgattt 43456653  T
Q  169 tctctagccactaggctatttga 191  Q
    |||||  ||||||| ||| ||||    
T  43456652 tctctgtccactagactacttga 43456630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 41845527 - 41845461
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccg 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  41845527 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggatcggggttcgaaccccg 41845461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 43413969 - 43413862
Alignment:
Q  80 atttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttctctagcca 178  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||| |||        ||||| ||||||||||| |||||||||||||||||||||||    
T  43413969 attttgtaagggataatgcacaatttgtgcaggggctggggttcgaatcccaa------acaccccacttattcatctttaaggtgaatttctctagcca 43413876  T
Q  179 ctaggctatttgac 192  Q
    |||||||| |||||    
T  43413875 ctaggctacttgac 43413862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 19733171 - 19733045
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    |||||||| |||||||||||||||||||||||||||||| ||||| ||||||||  |||||||||| ||      || |||||| | |||||||| ||||    
T  19733171 gtccccataagcttagctcatttggtaagggataatgcataatatatgcaggggtcggggttcgaatcc------cgaacacctaaattattcatcttta 19733078  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||| |||||| |||| |||||    
T  19733077 aggtgaatttctctaaccactaagctacttgac 19733045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 38063970 - 38064084
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    |||||||||||||||  |||||||||||||||||||||||||| ||||||||| |||||| | ||||||      | |||||| ||||||||||| ||||    
T  38063970 gtccccatgagcttaattcatttggtaagggataatgcacaatttgtgcagggactgggggttgaaccc------cagacaccccacttattcatcttta 38064063  T
Q  160 aggtgaatttctctagccact 180  Q
    ||||||||||||||| |||||    
T  38064064 aggtgaatttctctaaccact 38064084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 36104019 - 36103955
Alignment:
Q  66 catgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  36104019 catgagcttaactcatttggtaaaggataatgcacaatatgtgcaggggccggggttcgaacccc 36103955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 23139067 - 23139183
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcatt---t 157  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||||||||||| | ||||||||| |      | |||||| ||||||||||||   |    
T  23139067 gtccccatgagcttagctcatttgacaagggataatgcacaatgtgtgcaggggccgaggttcgaacac------cagacaccccacttattcattttat 23139160  T
Q  158 taaggtgaatttctctagccact 180  Q
    |||||||||||||||||| ||||    
T  23139161 taaggtgaatttctctagtcact 23139183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 363 - 423
Target Start/End: Original strand, 11919351 - 11919410
Alignment:
Q  363 tcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  11919351 tcggataatttt-caccgataaattatatatatattcgtcggagatcctaaattatccaat 11919410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 45536714 - 45536827
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcattttaa-gg 162  Q
    |||||||| |||| ||||||| |||||||||||||| ||| ||||||||||| || ||||||||||      |||||||| ||||||||||| ||||  |    
T  45536714 cccatgaggttaggtcatttgataagggataatgcaaaatttgtgcaggggccggagttcgaaccc------cggacaccccacttattcatcttaatag 45536807  T
Q  163 tgaatttctctagccactag 182  Q
    ||||||||||||||||||||    
T  45536808 tgaatttctctagccactag 45536827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 36587752 - 36587626
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||| ||||||||||||| |||||  ||||||||||| |||||  ||||||| |||||      || ||||| |||||||| || ||||    
T  36587752 gtccccatgagcttaactcatttggtaagagataaaacacaatatgtgtaggggtcggggttccaaccc------cgaacaccccacttatttatcttta 36587659  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    || |||||||||| ||||||||||||| |||||    
T  36587658 agatgaatttctcgagccactaggctacttgac 36587626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 40103522 - 40103583
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||||||| |||||||||||    
T  40103522 tgagcttagctcatttgataagggataatgcacaatataagcaggggctgaggttcgaaccc 40103583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 8350429 - 8350556
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca--tttt 158  Q
    |||||||| |||||| ||||||||||||| |||||| |||||||| ||||||||| || ||||||||      | |||||||| ||||||||||  ||||    
T  8350429 gtccccataagcttaactcatttggtaagtgataatacacaatatatgcaggggccggagttcgaac------ctcggacaccccacttattcatctttt 8350522  T
Q  159 aaggtgaatttctctagccactaggctatttgac 192  Q
    ||| ||||||| |||| ||||||| ||| |||||    
T  8350523 aagatgaatttatctaaccactagactacttgac 8350556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 175
Target Start/End: Complemental strand, 280084 - 279990
Alignment:
Q  75 agctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaaggtgaatttctct 173  Q
    ||||||||||||||||||||||| |||||||||||||||| | ||||||||||||      ||||||||  | ||||||| |||||||||||||||||||    
T  280084 agctcatttggtaagggataatgtacaatatgtgcagggg-tagggttcgaaccc------cggacacccaatttattcatttttaaggtgaatttctct 279992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 175
Target Start/End: Original strand, 635768 - 635862
Alignment:
Q  75 agctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaaggtgaatttctct 173  Q
    ||||||||||||||||||||||| |||||||||||||||| | ||||||||||||      ||||||||  | ||||||| |||||||||||||||||||    
T  635768 agctcatttggtaagggataatgtacaatatgtgcagggg-tagggttcgaaccc------cggacacccaatttattcatttttaaggtgaatttctct 635860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 175
Target Start/End: Original strand, 821571 - 821665
Alignment:
Q  75 agctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaaggtgaatttctct 173  Q
    ||||||||||||||||||||||| |||||||||||||||| | ||||||||||||      ||||||||  | ||||||| |||||||||||||||||||    
T  821571 agctcatttggtaagggataatgtacaatatgtgcagggg-tagggttcgaaccc------cggacacccaatttattcatttttaaggtgaatttctct 821663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 12831563 - 12831628
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaa 126  Q
    ||||||||||| ||| |||||||||||| ||| |||||||||||||||||||| |||| |||||||    
T  12831563 gtccccatgagtttaactcatttggtaaaggacaatgcacaatatgtgcagggtctggagttcgaa 12831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 19957412 - 19957303
Alignment:
Q  72 cttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaaggtgaatttc 170  Q
    ||||||||| |||||||||||||||||| | ||| ||||||||  | |||||||||||      |||||||| ||||||||||  |||||||||||||||    
T  19957412 cttagctcacttggtaagggataatgcatattatatgcaggggacgaggttcgaaccc------cggacaccccacttattcacctttaaggtgaatttc 19957319  T
Q  171 tctagccactaggcta 186  Q
    ||||||  ||||||||    
T  19957318 tctagcagctaggcta 19957303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 29114098 - 29114158
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcg 124  Q
    ||||||| ||||||||||||| |||||||||||||||||| ||||||||||| | ||||||    
T  29114098 cccatgaacttagctcatttgataagggataatgcacaatttgtgcaggggccgcggttcg 29114158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 32328141 - 32328180
Alignment:
Q  203 tataggagattttataattttaattggattctagatttta 242  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32328141 tataggagattttataattttaattggattctagatttta 32328180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 110
Target Start/End: Complemental strand, 38545018 - 38544977
Alignment:
Q  69 gagcttagctcatttggtaagggataatgcacaatatgtgca 110  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  38545018 gagcttacctcatttggtaagggataatgcacaatatgtgca 38544977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 192
Target Start/End: Complemental strand, 8349576 - 8349459
Alignment:
Q  70 agcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatt 168  Q
    |||||||||||||||||||| |||||| || ||||| ||||||||| || |||||||| |      || ||||| ||||||||||| |||||| ||||||    
T  8349576 agcttagctcatttggtaagtgataatacagaatatatgcaggggccggagttcgaactc------cgaacaccccacttattcatctttaagatgaatt 8349483  T
Q  169 tctctagccactaggctatttgac 192  Q
    | |||| ||||||| ||| |||||    
T  8349482 tatctaaccactagactacttgac 8349459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 192
Target Start/End: Original strand, 31153505 - 31153604
Alignment:
Q  89 gggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttctctagccactaggctat 187  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||| |||     || || |||||||| ||||||||| ||||||||||| ||||| |||     
T  31153505 gggataatgcacaatatgtgcaggggccgggattcgaacctcggacac-----ccccatttattcatctttaaggtggatttctctagctactagactac 31153599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 11052680 - 11052560
Alignment:
Q  67 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtga 165  Q
    ||||||||| |||||||||||||||||||||||||   |||||||||||   |||  ||||||         ||||| ||||||||||| ||||||||||    
T  11052680 atgagcttaactcatttggtaagggataatgcacatattgtgcaggggccaaggtgtgaaccctaa------acaccccacttattcatctttaaggtga 11052587  T
Q  166 atttctctagccactaggctatttgac 192  Q
    |||||||||||||||||| || |||||    
T  11052586 atttctctagccactaggttacttgac 11052560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 16973031 - 16973086
Alignment:
Q  77 ctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||||||| |||||||||||||||||||||||||||||  || |||||||| ||||    
T  16973031 ctcatttgttaagggataatgcacaatatgtgcaggggtcggtgttcgaactccgg 16973086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 11875884 - 11875953
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| |||||||||||||||||||    
T  11875884 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagctggggttcgaaccccgg 11875953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 11890891 - 11890960
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| |||||||||||||||||||    
T  11890891 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagctggggttcgaaccccgg 11890960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 12927802 - 12927864
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaa 126  Q
    |||||||||||| ||||||| ||| ||||||||||||||| |||||||||   ||||||||||    
T  12927802 cccatgagcttaactcatttagtaggggataatgcacaatttgtgcagggttcggggttcgaa 12927864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 13059251 - 13059182
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||||| ||||||||||||| |||||| |||| |||||| ||| | ||||||||| ||||||||||||||    
T  13059251 ggtccccgtgagcttagctcagttggta-gggacaatgcataatttatgcaggggcaggggttcgaacccc 13059182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 23178963 - 23178894
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  23178963 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 23178894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 32822109 - 32822147
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgca 99  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  32822109 gtccccatgagcttaactcatttggtaagggataatgca 32822147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 33820490 - 33820432
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaa 126  Q
    |||||||||||||||||||| |||||||| |||||| ||||||| ||  ||||||||||    
T  33820490 tgagcttagctcatttggtatgggataatacacaatttgtgcagaggtcggggttcgaa 33820432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 34038047 - 34037997
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggg 114  Q
    |||||||||||| || ||||| ||||||||||| |||||||||||||||||    
T  34038047 cccatgagcttaacttatttgataagggataatacacaatatgtgcagggg 34037997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 3311436 - 3311558
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 162  Q
    |||||||||||| ||||||||| ||||||||||| ||||| | |||||||    ||||||||||||      |||||||| ||||||||||| || |||     
T  3311436 cccatgagcttaactcatttggcaagggataatgtacaatttatgcagggatcagggttcgaaccc------cggacaccccacttattcatcttaaaga 3311529  T
Q  163 tgaatttctctagccactaggctatttga 191  Q
    ||||||| |||||||| || |||| ||||    
T  3311530 tgaatttttctagccagtatgctacttga 3311558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 16449123 - 16449190
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||||| |||||||||||||||    
T  16449123 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggttggggttcgaacccc 16449190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 26022245 - 26022312
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||    
T  26022245 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaacccc 26022312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 40444705 - 40444749
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcagg 112  Q
    ||||||||||||| |||||||||||||||||| ||||| ||||||    
T  40444705 tgagcttagctcacttggtaagggataatgcataatatatgcagg 40444749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 177
Target Start/End: Original strand, 10201254 - 10201366
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-tttt 158  Q
    |||| ||||||| |||| | | |||||||| ||||||||| ||||| || |||||  |||||||||||||      ||||||||||| |||||||  |||    
T  10201254 ggtcaccatgagtttagtttagttggtaagagataatgcataatatatgtaggggtcggggttcgaaccc------cggacacctcatttattcaccttt 10201347  T
Q  159 aaggtgaatttctctagcc 177  Q
    || ||||||||||||||||    
T  10201348 aaagtgaatttctctagcc 10201366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 11231417 - 11231487
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||||||||||||||||||| |||  |||||| | |||| ||| | ||||||||| ||||||||||||||||    
T  11231417 gtccccatgagcttagctcagttga-aagggacattgcataatttatgcaggggccggggttcgaaccccgg 11231487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 12770365 - 12770435
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||||||||||||||||||| ||| || |||| | |||| ||| | ||||||||| ||||||||||||||||    
T  12770365 gtccccatgagcttagctcagttgata-gggacattgcataatttatgcaggggccggggttcgaaccccgg 12770435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 30623294 - 30623356
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccg 131  Q
    ||||||||||||| ||||||||| | |||||| ||||| |||| || |||||||||||||||||    
T  30623294 tgagcttagctcagttggtaagg-acaatgcataatatatgcaaggtctggggttcgaaccccg 30623356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 31220337 - 31220388
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcagg 112  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||| ||||||    
T  31220337 gtccccgtgagcttagctcacttggtaagggataatgcattatatatgcagg 31220388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 38402732 - 38402771
Alignment:
Q  138 gacacctcacttattcattttaaggtgaatttctctagcc 177  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  38402732 gacacctcacttattcattttaaggtaaatttctttagcc 38402771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 2792777 - 2792846
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| ||| || |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  2792777 tccccgtgagcttagctcagttgata-gggatattgcatattatatgcaggggccggggttcgaaccccgg 2792846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 5328631 - 5328570
Alignment:
Q  70 agcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  5328631 agcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 5328570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 10736946 - 10736877
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  10736946 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 10736877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 24458315 - 24458384
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||| |||||||| || | | ||| ||||||||| ||||||||||||||||    
T  24458315 tccccgtgagcttagctcagttgg-aagggatattgtatattatatgcaggggccggggttcgaaccccgg 24458384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 29716858 - 29716927
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  29716858 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 29716927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 31821130 - 31821084
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgca 110  Q
    |||||||||||| ||||||||||||  ||||||||||||| ||||||    
T  31821130 cccatgagcttatctcatttggtaaaagataatgcacaatttgtgca 31821084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 34413060 - 34413129
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  34413060 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 34413129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 34894375 - 34894436
Alignment:
Q  70 agcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  34894375 agcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 34894436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 2787147 - 2787084
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  2787147 tgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 2787084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 2908164 - 2908097
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    ||||| |||||||||||| | || ||| |||| |||||| ||||| ||||||||| |||||||||||||    
T  2908164 gtccctatgagcttagcttagttagta-gggacaatgcataatatatgcaggggccggggttcgaaccc 2908097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 14583200 - 14583260
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacc 128  Q
    |||||||| |||| |||||| ||   |||||| ||||| ||||||||||||||||||||||    
T  14583200 tgagcttaactcagttggtagggacaaatgcataatatatgcaggggctggggttcgaacc 14583260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 20540178 - 20540115
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaa 126  Q
    ||||| ||||||||||||| ||| || |||||| |||| | ||| ||||||||||||||||||||    
T  20540178 tccccgtgagcttagctcagttgtta-gggatattgcatattatatgcaggggctggggttcgaa 20540115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 22274681 - 22274614
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||||||| |||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  22274681 cccatgagtttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 22274614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 30300333 - 30300396
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||| ||| ||  ||||| ||||| ||||||||| ||||||||||||||||    
T  30300333 tgagcttagctcagttgg-aagagacgatgcataatatatgcaggggccggggttcgaaccccgg 30300396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 37708687 - 37708758
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataa-tgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||||| ||||||||||||| |||||| ||||||| ||||   ||| ||||||||| ||||||||||||||||    
T  37708687 gtccccgtgagcttagctcaattggta-gggataagtgcattttatatgcaggggccggggttcgaaccccgg 37708758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 44444567 - 44444611
Alignment:
Q  88 agggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||| |||| | ||| ||||||||||||||||||||||||||    
T  44444567 agggatattgcatattatatgcaggggctggggttcgaaccccgg 44444611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 51 - 289
Target Start/End: Complemental strand, 15717125 - 15716889
Alignment:
Q  51 taaatatagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcactta 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15717125 taaatatagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccgggcacggacacctcactta 15717026  T
Q  151 ttcattttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaa 250  Q
    ||||||||||||||||||||||||||||||||||||||||||           | |||||||||||||||||||||||||||||||||||||||||||||    
T  15717025 ttcattttaaggtgaatttctctagccactaggctatttgacaaaaaaaaa--aaaggagattttataattttaattggattctagattttactttgaaa 15716928  T
Q  251 aattactccaatatgaacaaattctagattttattttga 289  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15716927 aattactccaatatgaacaaattctagattttattttga 15716889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 6228362 - 6228236
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||      |||||||| ||||||||||| ||||    
T  6228362 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccc------cggacaccccacttattcatcttta 6228269  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||||| |||||    
T  6228268 aggtgaatttctctagccactaggctacttgac 6228236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 5948848 - 5948973
Alignment:
Q  51 taaatatagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcactta 150  Q
    ||||||||||||||| || |||||| || |||| |||||||||||||||| |||||||||||||  |||||||||||||||||||||| |||||||||||    
T  5948848 taaatatagggtccctataagcttaccttattttgtaagggataatgcacgatatgtgcaggggtcggggttcgaaccccgggcacgggcacctcactta 5948947  T
Q  151 ttcat-tttaaggtgaatttctctag 175  Q
    ||||| ||||||||||||||||||||    
T  5948948 ttcatctttaaggtgaatttctctag 5948973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 18903469 - 18903343
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||      |||||||| ||||||||||| ||||    
T  18903469 gtccccatgagcttagctcatttggcaagggataatacacaatatgtgcaggggccggggttcgaaccc------cggacaccccacttattcatcttta 18903376  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||||| |||||    
T  18903375 aggtgaatttctctagccactaggctacttgac 18903343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 30260677 - 30260812
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaaaat 253  Q
    |||||||||| |||||||||||| |||||||||||||||          |||||||||||||||||||||||| |||||||| |||||| ||||||||||    
T  30260677 attttaaggtaaatttctctagctactaggctatttgacaaaaaaaaaatataggagattttataattttaatgggattctatattttattttgaaaaat 30260776  T
Q  254 tactccaatatgaacaaattctagattttattttga 289  Q
    ||||| |||||||||||| |||||||||||||||||    
T  30260777 tactcgaatatgaacaaaatctagattttattttga 30260812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 20821758 - 20821624
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaaaat 253  Q
    |||||||||| |||||||||||| |||||||||||||||          ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  20821758 attttaaggtaaatttctctagctactaggctatttgacaaaaaaaaa-tataggagattttataattttaattggattctatattttattttgaaaaat 20821660  T
Q  254 tactccaatatgaacaaattctagattttattttga 289  Q
    ||||| |||||||||||| |||||||||||||||||    
T  20821659 tactcgaatatgaacaaaatctagattttattttga 20821624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 192
Target Start/End: Original strand, 19748102 - 19748217
Alignment:
Q  71 gcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcattttaaggtgaatttc 170  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||      |||||||||| ||||||||||||||||||||||||||    
T  19748102 gcttagctcatttggtaagggataatgcacaatatgtgcagggattggggttcgaac------cacggacaccccacttattcattttaaggtgaatttc 19748195  T
Q  171 tctagccactaggctatttgac 192  Q
    |||  ||||||||||| |||||    
T  19748196 tctgaccactaggctacttgac 19748217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 20415663 - 20415545
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaa 160  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||      |||||||| ||||||||||| |||||    
T  20415663 tccccatgagtttagctcattttgtaagggataatgcacaatatgtgcaggggccagggttcgaaccc------cggacaccccacttattcatctttaa 20415570  T
Q  161 ggtgaatttctctagccactaggct 185  Q
    |||||||||||||||||||||||||    
T  20415569 ggtgaatttctctagccactaggct 20415545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 63 - 192
Target Start/End: Original strand, 17216953 - 17217077
Alignment:
Q  63 ccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaag 161  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||  || |||||||| |      |||||||| ||||||||||| ||||||    
T  17216953 ccccatgagcttagctcatttggtaagggataatgcataatatgtgtaggggtcggagttcgaactc------cggacaccccacttattcatctttaag 17217046  T
Q  162 gtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||| |||||    
T  17217047 gtgaatttctctagccactaggctacttgac 17217077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 24794991 - 24794871
Alignment:
Q  67 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtga 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||      |||||| | ||||||||||| |||||| |||    
T  24794991 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggttgggattcgaaccc------cggacatcccacttattcatatttaagatga 24794898  T
Q  166 atttctctagccactaggctatttgac 192  Q
    ||||||||||||||||| |||| ||||    
T  24794897 atttctctagccactagactatctgac 24794871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 4854408 - 4854282
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||      |||||||| ||||||||||| ||||    
T  4854408 gtccccatgagcttagctcatttggcaagggataatgtacaatgtgtgcaggggccggggttcgaaccc------cggacaccccacttattcatcttta 4854315  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    |||| |||||||||| ||||||| ||| |||||    
T  4854314 aggtaaatttctctaaccactagcctacttgac 4854282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 65 - 192
Target Start/End: Original strand, 25045737 - 25045863
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggt 163  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| || |  || ||||||||||||||||||  |||| ||    
T  25045737 ccatgagcttagctcatttggtaagggataattcacaatatgtgcaggggctgaggttcaaactccag--acagacacctcacttattcatcattaacgt 25045834  T
Q  164 gaatttctctagccactaggctatttgac 192  Q
    |||||| |||| ||||||||||| |||||    
T  25045835 gaatttttctaaccactaggctacttgac 25045863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 29322078 - 29321952
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||      | |||| | |||||||| || ||||    
T  29322078 gtcctcatgaacttagatcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc------cagacatcccacttatttatcttta 29321985  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||| ||| |||||    
T  29321984 aggtgaatttctctagccactagactacttgac 29321952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 323 - 423
Target Start/End: Original strand, 30260827 - 30260927
Alignment:
Q  323 catttcgtcggataatttatcggtgnnnnnnnttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaa 422  Q
    |||||| ||||||||||||||||||       ||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30260827 catttcatcggataatttatcggtgaaaaaaattatttcatcggataatttttcaccgataaattatatatatattcgtcggagatcctaaattatccaa 30260926  T
Q  423 t 423  Q
    |    
T  30260927 t 30260927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 173924 - 173856
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  173924 ttatttcgtcggataatttttcaccgataaattatatatatattcgtcggagatcctaaattatccaat 173856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 20821499 - 20821431
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20821499 ttatttcgtcggataatttttcaccgataaattatatatatattcgtcggagatcctaaattatccaat 20821431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 203 - 289
Target Start/End: Original strand, 5949006 - 5949092
Alignment:
Q  203 tataggagattttataattttaattggattctagattttactttgaaaaattactccaatatgaacaaattctagattttattttga 289  Q
    |||| ||||||||||||||||||||| ||||| | ||||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  5949006 tatatgagattttataattttaattgaattctggtttttattttgaaaaattactcgaatatgaacaaaatctagattttattttga 5949092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 15716772 - 15716702
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatat--atattcgtcggagatcctaaattatccaat 423  Q
    ||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  15716772 ttattttgtcggataatttttcaccgataaattatatatatatattcgtcggagatcctaaattatccaat 15716702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 64 - 192
Target Start/End: Complemental strand, 30422207 - 30422084
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaagg 162  Q
    |||||||||||| ||||||||||||||||||||| |||||||||| |||||   |||||||||| |      |||||||| || ||||| | ||||||||    
T  30422207 cccatgagcttaactcatttggtaagggataatgtacaatatgtgtaggggtccgggttcgaactc------cggacaccacatttatttatttttaagg 30422114  T
Q  163 tgaatttctctagccactaggctatttgac 192  Q
    ||||||||||| |||||||||||| |||||    
T  30422113 tgaatttctctggccactaggctacttgac 30422084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 3974435 - 3974560
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||  |||||||||||        ||||| || ||||||||||| ||||    
T  3974435 gtccccatgagcttaactcatttggtatggg-taatgcagaatatgtgcaggggtcggggttcgaac------ttcggactccccacttattcatcttta 3974527  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||| | |||||||||||||||    
T  3974528 aggtgaatttctctaactactaggctatttgac 3974560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 11552864 - 11552990
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    |||||| | |||||||||||||||| ||||||||| | ||||| ||||||||||| |||||||||||||| ||      |||| ||||||||||| ||||    
T  11552864 gtccccttaagcttagctcatttggcaagggataacgtacaatgtgtgcaggggccggggttcgaaccccagg------caccccacttattcatcttta 11552957  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    |||| ||||| |||||||||||| ||| |||||    
T  11552958 aggtaaatttttctagccactagtctacttgac 11552990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 64 - 192
Target Start/End: Complemental strand, 1128518 - 1128392
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat----ttta 159  Q
    ||||||| |||| |||||||| |||||||||||||| |||||||||||||| ||||||||||||||      | |||||| || ||||||||    ||||    
T  1128518 cccatgaccttaactcatttgataagggataatgcataatatgtgcaggggttggggttcgaaccc------cagacaccccatttattcatcatcttta 1128425  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    |||||||||||||||| |||||| ||| |||||    
T  1128424 aggtgaatttctctagtcactagactacttgac 1128392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 21874322 - 21874230
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcattttaa 160  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||| |||| || ||||||| ||      || ||||||||||||||||||||||    
T  21874322 tccccataagcttaactcatttggtaagggataatgcacaatatgtgcatgggcaggagttcgaatcc------cgaacacctcacttattcattttaa 21874230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 7955018 - 7954904
Alignment:
Q  68 tgagcttagctcattt-ggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtga 165  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||  | ||| |||||||      || ||| | ||||||||||| |||||| |||    
T  7955018 tgagcttaactcattttggtaagggataatgcacaatatgtgcagggggcgaggtgcgaaccc------cgaacatcccacttattcatctttaagatga 7954925  T
Q  166 atttctctagccactaggcta 186  Q
    |||||||||||||||||||||    
T  7954924 atttctctagccactaggcta 7954904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 9357163 - 9357271
Alignment:
Q  75 agctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaaggtgaatttctct 173  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||||||||| |      | ||||||| | |||||||  ||||||||||||||||||    
T  9357163 agctcatttgataagggataatgtacaatttgtgcaggggctggggttcgaactc------cagacacctaatttattcacctttaaggtgaatttctct 9357256  T
Q  174 agccactaggctatt 188  Q
    |  ||||||||||||    
T  9357257 aatcactaggctatt 9357271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 18618641 - 18618570
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||  | ||| ||||||||||| |||||    
T  18618641 gtccccatgagcttagctcatttggtaaaagataatgcacaatatgtataagggttggggttcgaatcccgg 18618570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 31637340 - 31637451
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaagg 162  Q
    |||| ||||||| ||||||||||| ||||||||||||||||| ||||||||  |||||||||      | | ||||||||  ||||||| | ||||||||    
T  31637340 cccacgagcttaactcatttggtatgggataatgcacaatatttgcaggggtcggggttcga------gcctcggacaccctacttatttatttttaagg 31637433  T
Q  163 tgaatttctctagccact 180  Q
    ||||||||||||||||||    
T  31637434 tgaatttctctagccact 31637451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 9435624 - 9435693
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||||||||||||||||||||    
T  9435624 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggctggggttcgaaccccgg 9435693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 28536269 - 28536216
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggc 115  Q
    |||||||||||||||||||||||| |||||| |||  |||||||||||||||||    
T  28536269 tccccatgagcttagctcatttggcaagggaaaatatacaatatgtgcaggggc 28536216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 19221696 - 19221809
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaagg 162  Q
    |||||||| ||| |||||||||| | | |||||||| || |||||||||||||| ||||||||| |      | |||||| || || |||| ||||||||    
T  19221696 cccatgagtttaactcatttggtgaagaataatgcataacatgtgcaggggctgaggttcgaactc------cagacaccccatttgttcatttttaagg 19221789  T
Q  163 tgaatttctctagccactag 182  Q
    ||||||||||||||||||||    
T  19221790 tgaatttctctagccactag 19221809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 9763506 - 9763553
Alignment:
Q  145 cacttattcattttaaggtgaatttctctagccactaggctatttgac 192  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||    
T  9763506 cacttattcactttaaggtgaatttctctagccactatgctacttgac 9763553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 4408356 - 4408421
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacc 128  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||||||||||||||||    
T  4408356 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggctggggttcgaacc 4408421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 11611354 - 11611488
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcac-aatatgtgc----------aggggctggggttcgaaccccgggcacggacacctcacttatt 152  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||||          ||||||||||||||||||||       ||||||| ||||||||    
T  11611354 cccatgagcttagttcatttggtaagggacaatgcacaaatatgtgcaggagttgggaggggctggggttcgaaccc------tggacaccccacttatt 11611447  T
Q  153 cat-tttaaggtgaatttctctagccactaggctatttgac 192  Q
    ||| ||||| ||||||||||||||| | ||||||| |||||    
T  11611448 catctttaatgtgaatttctctagcaattaggctacttgac 11611488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 423
Target Start/End: Complemental strand, 13000749 - 13000715
Alignment:
Q  389 tatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||||||||||||||||||||||||||||||||    
T  13000749 tatatatattcgtcggagatcctaaattatccaat 13000715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 2251837 - 2251905
Alignment:
Q  63 ccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  2251837 ccccgtgagcttagctcagttggta-gggatattgcatactatatgcaggggccggggttcgaaccccgg 2251905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 6210052 - 6210119
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||| ||||||||| |||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  6210052 tccccgtgaacttagctcagttggta-gggatattgcatattatatgcaggggctggggttcgaacccc 6210119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 7273044 - 7273112
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    |||||| |||||||| |||| |||||||||||||||| | ||||| |||| || ||| |||||||||||    
T  7273044 gtccccgtgagcttaactcagttggtaagggataatgaataatatatgcaaggtctgtggttcgaaccc 7273112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 24466825 - 24466892
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    |||||||| ||||||||||||||||| | ||||||||||  |||| ||||||||  |||||||||||||    
T  24466825 gtccccataagcttagctcatttggtgaaggataatgca-tatatatgcaggggacggggttcgaaccc 24466892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 30885642 - 30885575
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| | ||||||||||||||||||||||    
T  30885642 tccccgtgagcttagctcagttggta-gggatattgcatattatatacaggggctggggttcgaacccc 30885575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 32611624 - 32611557
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  32611624 cccatgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 32611557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 20568359 - 20568289
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccg 131  Q
    ||||||| ||||||||||||| ||||||| ||| | |||| ||||| ||||||||  |||||||||||||||    
T  20568359 ggtccccgtgagcttagctcagttggtaa-ggacattgcataatatatgcaggggtcggggttcgaaccccg 20568289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 1194734 - 1194696
Alignment:
Q  138 gacacctcacttattcattttaaggtgaatttctctagc 176  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  1194734 gacaccccacttattcactttaaggtgaatttctctagc 1194696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 1968994 - 1969063
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| | || | ||| ||||||||| ||||||||||||||||    
T  1968994 tccccgtgagcttagctcagttggta-gggatattacatattatatgcaggggccggggttcgaaccccgg 1969063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 107
Target Start/End: Complemental strand, 3200181 - 3200139
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgt 107  Q
    ||||||||||| || ||||||||||| ||||||||||||||||    
T  3200181 ccatgagcttaacttatttggtaaggaataatgcacaatatgt 3200139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 5757901 - 5757847
Alignment:
Q  139 acacctcacttattcat-tttaaggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||  |||||||||||||||||||||| | |||||| |||||    
T  5757901 acacctcacttattcacatttaaggtgaatttctctagccgccaggctacttgac 5757847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 7207842 - 7207911
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  7207842 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 7207911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 10934597 - 10934666
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  10934597 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 10934666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 15091446 - 15091515
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| ||||| ||||||| |||| | ||| ||||||||| |||||||||| |||||    
T  15091446 tccccgtgagcttagctcagttggt-agggatattgcatattatatgcaggggccggggttcgaatcccgg 15091515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 17441911 - 17441842
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  17441911 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 17441842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 19953900 - 19953831
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  19953900 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 19953831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 3200104 - 3200059
Alignment:
Q  148 ttattcat-tttaaggtgaatttctctagccactaggctatttgac 192  Q
    |||||||| ||||||||||||||||||||||| ||||||| |||||    
T  3200104 ttattcatctttaaggtgaatttctctagccaataggctacttgac 3200059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 5641723 - 5641666
Alignment:
Q  136 cggacacctcacttattcat-tttaaggtgaatttctctagccactaggctatttgac 192  Q
    |||||||| ||||||||||  |||||||||||||||||||||| |||| ||| |||||    
T  5641723 cggacaccccacttattcacctttaaggtgaatttctctagccgctagactacttgac 5641666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 7545327 - 7545395
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccg 131  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||||||  ||||||||||||||    
T  7545327 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccagggttcgaaccccg 7545395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 15964009 - 15963949
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    ||||||||||||| |||||| |||||| |||| | | | |||||||||||||||||||||||    
T  15964009 tgagcttagctcagttggta-gggatattgcatattttatgcaggggctggggttcgaaccc 15963949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 32670127 - 32670059
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    |||||| ||||||||||||| |||||| || ||| |||| ||| | ||||||||| ||||||||||||||    
T  32670127 gtccccttgagcttagctcaattggta-ggaatattgcataatttatgcaggggcaggggttcgaacccc 32670059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 3294768 - 3294831
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||||| |||||| |||| | ||| ||||||||  ||||||||||||||||    
T  3294768 tgagcttagctcagttggta-gggatattgcatattatatgcaggggtcggggttcgaaccccgg 3294831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 93
Target Start/End: Complemental strand, 4096661 - 4096633
Alignment:
Q  65 ccatgagcttagctcatttggtaagggat 93  Q
    |||||||||||||||||||||||||||||    
T  4096661 ccatgagcttagctcatttggtaagggat 4096633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 7177293 - 7177360
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| || |   ||| ||||||||||||||||||||||||    
T  7177293 tccccgtgagcttagctcagttggta-gggatattgtattttatatgcaggggctggggttcgaacccc 7177360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 8857088 - 8857155
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| | || | ||| ||||||||| ||||||||||||||    
T  8857088 tccccgtgagcttagctcagttggta-gggatattacatattatatgcaggggccggggttcgaacccc 8857155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 51 - 289
Target Start/End: Complemental strand, 12375524 - 12375286
Alignment:
Q  51 taaatatagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcactta 150  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12375524 taaatatagggtccccatgagcttagctcatttggtaatggataatgcacaatatgtgcaggggccggggttcgaaccccgggcacggacacctcactta 12375425  T
Q  151 ttcattttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaa 250  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| |||||||    
T  12375424 ttcattttaaggtgaatttctctagccactaggctatttgacaaaaaaaaaatataggagattttataattttaattggattctagattttattttgaaa 12375325  T
Q  251 aattactccaatatgaacaaattctagattttattttga 289  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  12375324 aattactcgaatatgaacaaaatctagattttattttga 12375286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 52 - 289
Target Start/End: Original strand, 15696191 - 15696428
Alignment:
Q  52 aaatatagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttat 151  Q
    |||||||||| || |||||| |||||||||||| ||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||||||||||    
T  15696191 aaatatagggccctcatgagtttagctcatttgataagggataatgcacaatatgtgtaggggccgggattcga-ccccgggcacggacacctcacttat 15696289  T
Q  152 tcattttaaggtgaatttctctagccactaggctatttgac-nnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaa 250  Q
    |||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||| |||||||    
T  15696290 tcattttaaggtgaatttctctagccactaggctatttgacaaaaaaaaaaatataggagattttataattttaattggattctagattttattttgaaa 15696389  T
Q  251 aattactccaatatgaacaaattctagattttattttga 289  Q
    |||||||| |||||| ||||| |||||||||||||||||    
T  15696390 aattactcgaatatgtacaaaatctagattttattttga 15696428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 31250141 - 31250259
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaa 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||      |||||||| ||||||||||| |||||    
T  31250141 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccc------cggacaccccacttattcatctttaa 31250234  T
Q  161 ggtgaatttctctagccactaggct 185  Q
    |||||||||||||||||||||||||    
T  31250235 ggtgaatttctctagccactaggct 31250259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 154 - 288
Target Start/End: Complemental strand, 36037607 - 36037474
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaaaat 253  Q
    |||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  36037607 attttaaggtgaatttctctagccactaggctatttgacaaaaaaaaa-tataggagattttataattttaattggattctatattttattttgaaaaat 36037509  T
Q  254 tactccaatatgaacaaattctagattttattttg 288  Q
    ||||| |||||||||||| ||||||||||||||||    
T  36037508 tactcgaatatgaacaaaatctagattttattttg 36037474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 7671958 - 7671823
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaaaat 253  Q
    ||||||| ||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  7671958 attttaaagtgaatttctctaaccactaggctatttgacaaaaaaaaaatataggagattttataattttaattggattctatattttattttgaaaaat 7671859  T
Q  254 tactccaatatgaacaaattctagattttattttga 289  Q
    ||||| |||||||||||| |||||||||||||||||    
T  7671858 tactcgaatatgaacaaaatctagattttattttga 7671823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 38503359 - 38503233
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||      |||||||| ||||||||||| ||||    
T  38503359 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccc------cggacaccccacttattcatcttta 38503266  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||| ||| ||| |||||    
T  38503265 aggtgaatttctctagccaatagactacttgac 38503233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 43227860 - 43227974
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaa 160  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||      |||||||| ||||||||||| |||||    
T  43227860 tccctatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccc------cggacaccccacttattcatctttaa 43227953  T
Q  161 ggtgaatttctctagccacta 181  Q
    |||||||||||||||||||||    
T  43227954 ggtgaatttctctagccacta 43227974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 11784847 - 11784984
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnn--tataggagattttataattttaattggattctagattttactttgaaaa 251  Q
    ||||||||||||||||||||| |||||||||||||||||            ||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  11784847 attttaaggtgaatttctctaaccactaggctatttgacaaaaaaaaaaaatataggagattttataattttaattggattctatattttattttgaaaa 11784946  T
Q  252 attactccaatatgaacaaattctagattttattttga 289  Q
    ||||||| |||||||||||| ||| |||||||||||||    
T  11784947 attactcgaatatgaacaaaatcttgattttattttga 11784984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 30487085 - 30487222
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnnta--taggagattttataattttaattggattctagattttactttgaaaa 251  Q
    |||||||||| |||||||||||| |||||||||||||||          ||  ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  30487085 attttaaggtaaatttctctagctactaggctatttgacaaaaaaaaaataaataggagattttataattttaattggattctatattttattttgaaaa 30487184  T
Q  252 attactccaatatgaacaaattctagattttattttga 289  Q
    ||||||  |||||||||||| |||||||||||||||||    
T  30487185 attacttgaatatgaacaaaatctagattttattttga 30487222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 17077360 - 17077480
Alignment:
Q  67 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtga 165  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||||      |||||||| ||||||||||| || |||||||    
T  17077360 atgagcttagctcatttggtaagggataatgcacaatttgtgcaggggtcgggattcgaaccc------cggacaccccacttattcatcttaaaggtga 17077453  T
Q  166 atttctctagccactaggctatttgac 192  Q
    |||| |||||||||||||||| |||||    
T  17077454 atttatctagccactaggctacttgac 17077480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 42208913 - 42209035
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 162  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||| |||| | ||||||||| |      |||||||||||||||||||| |||||||    
T  42208913 cccatgagcttagctcatttagtaagggataatacacaatatgtgca-gggccgaggttcgaactc------cggacacctcacttattcatctttaagg 42209005  T
Q  163 tgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||| |||||||||| |||||    
T  42209006 tgaatttctctagtcactaggctacttgac 42209035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 15696535 - 15696603
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  15696535 ttattttgtcggataatttttcaccgataaattaaatatatattcgtcggagatcctaaattatccaat 15696603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 356 - 423
Target Start/End: Complemental strand, 7671727 - 7671660
Alignment:
Q  356 tattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7671727 tatttcgtcggataatttttcaccgataaattatatatatattcgtcggagatcctaaattatccaat 7671660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 30487342 - 30487410
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  30487342 ttatttcgtcggataatttttcacagataaattatatatatattcgtcggagatcctaaattatccaat 30487410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 36037326 - 36037258
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  36037326 ttatttcgtcggataattttttaccgataaattatatatatattcgtcggagatcctaaattatccaat 36037258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 16437916 - 16437986
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaat--tatatatatattcgtcggagatcctaaattatccaat 423  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  16437916 ttattttgtcggataatttttcaccgataaattatatatatatattcgtcggagatcctaaattatccaat 16437986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 4395954 - 4395827
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttt 158  Q
    |||||||||||||||| ||||||||| ||  ||||||||| ||| ||||||||||| || ||||||||||      | |||||| || |||||||| |||    
T  4395954 ggtccccatgagcttaactcatttggcaaatgataatgcataatgtgtgcaggggccggagttcgaaccc------ctgacaccccatttattcatcttt 4395861  T
Q  159 aaggtgaatttctctagccactaggctatttgac 192  Q
    |||||||||||||||||||| |||||||||||||    
T  4395860 aaggtgaatttctctagccaataggctatttgac 4395827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 15470723 - 15470608
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||| |||||||||  ||||||||||||||||||||||||||||||||| |||||| | |||||||||      | |||||| || |||||||| ||||    
T  15470723 gtccctatgagcttaattcatttggtaagggataatgcacaatatgtgcaagggctgagattcgaaccc------cagacaccccatttattcatcttta 15470630  T
Q  160 aggtgaatttctctagccacta 181  Q
    ||||||||||||||||||||||    
T  15470629 aggtgaatttctctagccacta 15470608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 5039674 - 5039799
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||||||| |||| |||||||||||        |||||||| ||||||||||| ||||    
T  5039674 gtccccatgagcttaactcatttggtaa-ggataatgtacaatatgtgcaagggccggggttcgaac------ttcggacaccccacttattcatcttta 5039766  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    |||| |||||||||||||||||| ||| |||||    
T  5039767 aggtaaatttctctagccactagactacttgac 5039799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 191
Target Start/End: Original strand, 1572115 - 1572228
Alignment:
Q  73 ttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttct 171  Q
    |||||||||||| |||||||| ||||||| | |||||||||||||||||||||||||      ||||| || ||||||||||| || |||||||||||||    
T  1572115 ttagctcatttgttaagggattatgcacattttgtgcaggggctggggttcgaaccc------cggactccccacttattcatcttaaaggtgaatttct 1572208  T
Q  172 ctagccactaggctatttga 191  Q
    ||||||||||| ||| ||||    
T  1572209 ctagccactagactacttga 1572228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 11785117 - 11785185
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||| |||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||    
T  11785117 ttatttcgtcggataatttttcactgataagttatatatatattcgtcggagatcctaaattatccaat 11785185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 128
Target Start/End: Complemental strand, 931040 - 930973
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacc 128  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||    
T  931040 gtccccatgagcatagctcattcggtaagggacaatgcacaatatgtgcaggggttggggttcgaacc 930973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 70 - 192
Target Start/End: Original strand, 5263171 - 5263288
Alignment:
Q  70 agcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatt 168  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| ||  ||||||||||        |||||| || |||||||| |||||| ||||||    
T  5263171 agcttagctcatttggtaatggataatgcacaatatgtgtagggggtgatgttcgaaccc------gagacaccacatttattcatctttaagctgaatt 5263264  T
Q  169 tctctagccactaggctatttgac 192  Q
    |||||||||||||||||| |||||    
T  5263265 tctctagccactaggctacttgac 5263288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 33545476 - 33545363
Alignment:
Q  73 ttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttct 171  Q
    |||||||||||| || ||||||||||||||||||||||||||  || ||| ||||| |||      ||||| | ||||||||| ||||||||||||||||    
T  33545476 ttagctcatttgctatgggataatgcacaatatgtgcaggggtcggagtttgaacctcgg------acacccc-cttattcatctttaaggtgaatttct 33545384  T
Q  172 ctagccactaggctatttgac 192  Q
    ||||||||||||||| |||||    
T  33545383 ctagccactaggctacttgac 33545363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 461999 - 462067
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    ||||| |||| |||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||||    
T  461999 gtccctatgaacttagctcatttggtaaggggtaatgcacaatatgtgtaggagctagggttcgaaccc 462067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 42643908 - 42643852
Alignment:
Q  61 gtccccatgagcttagc---tcatttggtaagggataatgcacaatatgtgcagggg 114  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  42643908 gtccccatgagcttagcagctcatttggtaagggataatgcacaatatgtgcagggg 42643852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 15106986 - 15106918
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| |||||| || |||||||||||||||||||||||| ||||||| ||  ||||||||||||||||    
T  15106986 cccattagcttaacttatttggtaagggataatgcacaatttgtgcagaggtcggggttcgaaccccgg 15106918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 17087107 - 17087068
Alignment:
Q  203 tataggagattttataattttaattggattctagatttta 242  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17087107 tataggagattttataattttaattggattctagatttta 17087068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 17087279 - 17087318
Alignment:
Q  203 tataggagattttataattttaattggattctagatttta 242  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17087279 tataggagattttataattttaattggattctagatttta 17087318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 87784 - 87850
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaac 127  Q
    ||||||||||||| | ||||||||||||||||||||||||||||| |||| |||  || ||||||||    
T  87784 gtccccatgagctcaactcatttggtaagggataatgcacaatatatgcaagggtcggagttcgaac 87850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 31991863 - 31991798
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaa 126  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||| ||||||||  ||||||||||    
T  31991863 gtccccttgagcttagctcacttggtaagggataatgcattatatatgcaggggtcggggttcgaa 31991798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 43263206 - 43263259
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggg 114  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |||| ||||||    
T  43263206 gtccccatgagcttaactcatttggtaagagataatgcacaacatgtacagggg 43263259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 3517829 - 3517790
Alignment:
Q  203 tataggagattttataattttaattggattctagatttta 242  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  3517829 tatagaagattttataattttaattggattctagatttta 3517790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 423
Target Start/End: Complemental strand, 12375148 - 12375113
Alignment:
Q  388 atatatatattcgtcggagatcctaaattatccaat 423  Q
    ||||||||||||||||||||||||||||||||||||    
T  12375148 atatatatattcgtcggagatcctaaattatccaat 12375113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 13576316 - 13576359
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaata 104  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  13576316 gtcctcatgagcttaactcatttggtaagggataatgcacaata 13576359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 191
Target Start/End: Original strand, 26671600 - 26671701
Alignment:
Q  85 gtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcatttt--aaggtgaatttctctagccactag 182  Q
    ||||||||||||||||||| ||||||||||||| | |||||| |       | |||||| ||||||||||| ||  ||||||||||||||||||||||||    
T  26671600 gtaagggataatgcacaatttgtgcaggggctgagtttcgaatc-------cagacaccccacttattcatcttaaaaggtgaatttctctagccactag 26671692  T
Q  183 gctatttga 191  Q
     ||| ||||    
T  26671693 actacttga 26671701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 191
Target Start/End: Original strand, 26943197 - 26943298
Alignment:
Q  85 gtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcatttt--aaggtgaatttctctagccactag 182  Q
    ||||||||||||||||||| ||||||||||||| | |||||| |       | |||||| ||||||||||| ||  ||||||||||||||||||||||||    
T  26943197 gtaagggataatgcacaatttgtgcaggggctgagtttcgaatc-------cagacaccccacttattcatcttaaaaggtgaatttctctagccactag 26943289  T
Q  183 gctatttga 191  Q
     ||| ||||    
T  26943290 actacttga 26943298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 1984291 - 1984249
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaat 103  Q
    |||| |||||||||| |||||||||||||||||||||||||||    
T  1984291 gtccacatgagcttaactcatttggtaagggataatgcacaat 1984249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 6518848 - 6518779
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| |||||||||||||||||||    
T  6518848 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagctggggttcgaaccccgg 6518779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 17545244 - 17545175
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  17545244 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 17545175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 29530796 - 29530838
Alignment:
Q  90 ggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  29530796 ggataatgcacaatttgtgcaggggccggggttcgaaccccgg 29530838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 15254253 - 15254204
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggg 114  Q
    |||||||||||||||||||| |||| ||||||||||||||| || |||||    
T  15254253 ccatgagcttagctcatttgttaagagataatgcacaatatatgtagggg 15254204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 16386808 - 16386744
Alignment:
Q  67 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||||||||||||| |||||| |||||| |||| | ||| |||||| |||||||||||||||||||    
T  16386808 atgagcttagctcagttggta-gggatattgcatattatatgcaggagctggggttcgaaccccgg 16386744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 174
Target Start/End: Original strand, 34729481 - 34729572
Alignment:
Q  77 ctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaaggtgaatttctcta 174  Q
    |||| |||||||||||||||||| | ||| ||||||||  ||||||||||||       |||||||| ||||||||||  |||||||||||||||||||    
T  34729481 ctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaacc-------cggacaccccacttattcacctttaaggtgaatttctcta 34729572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 3198324 - 3198394
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||||| ||||||||||||| |||||| |||| | |||| ||||| |||||||| || ||||||||||||||    
T  3198324 gtccccgtgagcttagctcagttggta-gggacattgcataatatatgcaggggttgaggttcgaaccccgg 3198394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 21918050 - 21918116
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| ||||||||||||||||    
T  21918050 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagctggggttcgaaccc 21918116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 4417757 - 4417688
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  4417757 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 4417688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 8241048 - 8241117
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||||||||| ||||| ||||||| |||| | ||| |||| |||  ||||||||||||||||    
T  8241048 tccccatgagcttagctcagttggt-agggatattgcatattatatgcaagggtcggggttcgaaccccgg 8241117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 9835031 - 9835100
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  9835031 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 9835100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 12256582 - 12256524
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaa 126  Q
    ||||||||||||| |||||| | ||||||||| ||||| ||||||||  ||||||||||    
T  12256582 tgagcttagctcacttggtatgagataatgcataatatatgcaggggtcggggttcgaa 12256524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 12463754 - 12463823
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  12463754 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 12463823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 12891555 - 12891624
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| || |||||| ||||||||||||||||    
T  12891555 tccccgtgagcttagctcagttggta-gggatattgcatattatatgtaggggccggggttcgaaccccgg 12891624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 13622018 - 13621949
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| ||||||  ||| | ||| ||||||||| ||||||||||||||||    
T  13622018 tccccgtgagcttagctcagttggta-gggatatcgcatattatatgcaggggccggggttcgaaccccgg 13621949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 20191442 - 20191560
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaaggtgaa 166  Q
    |||||||| |||| ||||||||||||||||||   ||| ||||||||  |||||||||||||      |||||||  ||||||||||  |||||||| ||    
T  20191442 tgagcttaactcacttggtaagggataatgca-tttatatgcaggggtcggggttcgaaccc------cggacactccacttattcacctttaaggtaaa 20191534  T
Q  167 tttctctagccactaggctatttgac 192  Q
    ||||||| |||||||| ||| |||||    
T  20191535 tttctctggccactagactacttgac 20191560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 32505686 - 32505755
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  32505686 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 32505755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 3294076 - 3294141
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaa 126  Q
    |||||| |||||||| || | ||| |||||||||||||| ||| | ||||||||| ||||||||||    
T  3294076 gtccccgtgagcttaacttacttgttaagggataatgcataatttatgcaggggccggggttcgaa 3294141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 15680934 - 15680877
Alignment:
Q  136 cggacacctcacttattcat-tttaaggtgaatttctctagccactaggctatttgac 192  Q
    |||||||| ||||||||||  ||||||||||||||||||| || |||||||| |||||    
T  15680934 cggacaccccacttattcacctttaaggtgaatttctctaaccgctaggctacttgac 15680877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 39405309 - 39405358
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggg 114  Q
    ||||||| ||| ||||||||||||||||||||||| || ||||| |||||    
T  39405309 ccatgaggttacctcatttggtaagggataatgcataacatgtgtagggg 39405358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 41477430 - 41477362
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccg 131  Q
    ||||| ||||||||||||| |||||| ||||||  |||   ||| |||||||||||||||||||||||||    
T  41477430 tccccgtgagcttagctcagttggta-gggatatcgcattttatatgcaggggctggggttcgaaccccg 41477362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 6489008 - 6489071
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| ||||| ||||| |||||| ||||| |||| || ||||||||| ||||||||    
T  6489008 tgagcttagctcagttggt-agggacaatgcataatatatgcaaggtctggggttcaaaccccgg 6489071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 8968753 - 8968816
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  8968753 tgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 8968816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 9628117 - 9628161
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcagg 112  Q
    |||||||| ||||||||||||| ||||||||| ||||| ||||||    
T  9628117 tgagcttaactcatttggtaagagataatgcataatatatgcagg 9628161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 24033082 - 24033149
Alignment:
Q  69 gagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacg 137  Q
    |||||||||||| |||||| |||||| ||||   ||| ||||||||| |||||||||||||||| ||||    
T  24033082 gagcttagctcagttggta-gggatattgcattttatatgcaggggccggggttcgaaccccggacacg 24033149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 35515516 - 35515579
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  35515516 tgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 35515579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 52 - 289
Target Start/End: Complemental strand, 121910 - 121674
Alignment:
Q  52 aaatatagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttat 151  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  121910 aaatatagggtccccatgagcttagctcatttggtaggggataatgcacaatatgtgcagggaccggggttcgaaccccgggcacggacacctcacttat 121811  T
Q  152 tcattttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaaa 251  Q
    |||||||||||||||||| ||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||    
T  121810 tcattttaaggtgaatttatctagccactaggctatttgac-aaaaaaaaatataggagattttataattttaattggattctagattttactttgaaaa 121712  T
Q  252 attactccaatatgaacaaattctagattttattttga 289  Q
    ||||||||||||||||||||||||||||||||||||||    
T  121711 attactccaatatgaacaaattctagattttattttga 121674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 180; Significance: 5e-97; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 51 - 289
Target Start/End: Complemental strand, 13210276 - 13210039
Alignment:
Q  51 taaatatagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcactta 150  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  13210276 taaatatagggtccctatgagcttagctcatttggtcagggataatgcacaatatgtgcaggggccggggttcgaaccccgggtacggacacctcactta 13210177  T
Q  151 ttcattttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaa 250  Q
    ||||||||||||||||||||||||||||||| || |||||||          ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13210176 ttcattttaaggtgaatttctctagccactacgcaatttgac-aaaaaaaaatataggagattttataattttaattggattctagattttactttgaaa 13210078  T
Q  251 aattactccaatatgaacaaattctagattttattttga 289  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13210077 aattactccaatatgaacaaattctagattttattttga 13210039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 16556447 - 16556570
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||      || ||||| ||||||||||| |||||||    
T  16556447 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccc------cgaacaccccacttattcatctttaagg 16556540  T
Q  163 tgaatttctctagccactaggctatttgac 192  Q
    |||||||||||||||||||||||| |||||    
T  16556541 tgaatttctctagccactaggctacttgac 16556570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 39719819 - 39719683
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnn-tataggagattttataattttaattggattctagattttactttgaaaaa 252  Q
    |||||||||||||||||||||||||||||||||||||||           |||||||||||| |||||||||||||||||||| |||||| |||||||||    
T  39719819 attttaaggtgaatttctctagccactaggctatttgacaaaaaaaaatatataggagatttaataattttaattggattctatattttattttgaaaaa 39719720  T
Q  253 ttactccaatatgaacaaattctagattttattttga 289  Q
    |||||| |||||||||||| |||||||||||||||||    
T  39719719 ttactcgaatatgaacaaaatctagattttattttga 39719683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 40407062 - 40406943
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggg-ctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||      |||||||| ||||||||||| ||||    
T  40407062 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccgggggttcgaaccc------cggacaccccacttattcatcttta 40406969  T
Q  160 aggtgaatttctctagccactaggct 185  Q
    ||||||||||||||||||||||||||    
T  40406968 aggtgaatttctctagccactaggct 40406943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 45281951 - 45282087
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnn-tataggagattttataattttaattggattctagattttactttgaaaaa 252  Q
    ||||||||||||||||||||| |||||||||||||||||           ||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  45281951 attttaaggtgaatttctctaaccactaggctatttgacaaaaaaaaaaatataggagattttataattttaattggattctatattttattttgaaaaa 45282050  T
Q  253 ttactccaatatgaacaaattctagattttattttga 289  Q
    |||||| |||||||||||| |||||||||||||||||    
T  45282051 ttactcgaatatgaacaaaatctagattttattttga 45282087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 46283115 - 46283241
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||      |||||||| ||||||||||| ||||    
T  46283115 gtccccatgagcttacctcatttggtaagggataatgcacaatatgtgcagcggccggggttcgaaccc------cggacaccccacttattcatcttta 46283208  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    |||||||||||||||| |||||| ||| |||||    
T  46283209 aggtgaatttctctagtcactagactacttgac 46283241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 45630496 - 45630635
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnn----tataggagattttataattttaattggattctagattttactttgaa 249  Q
    ||||||||||||||||||||| |||||||||||||||||              ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  45630496 attttaaggtgaatttctctaaccactaggctatttgacaaaaaaaaaaaaaatataggagattttataattttaattggattctatattttattttgaa 45630595  T
Q  250 aaattactccaatatgaacaaattctagattttattttga 289  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  45630596 aaattactcgaatatgaacaaaatctagattttattttga 45630635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 203 - 289
Target Start/End: Complemental strand, 35012640 - 35012554
Alignment:
Q  203 tataggagattttataattttaattggattctagattttactttgaaaaattactccaatatgaacaaattctagattttattttga 289  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  35012640 tataggagattttataattttaattggattctatattttattttgaaaaattactcgaatatgaacaaaatctagattttattttga 35012554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 50815700 - 50815826
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||      |||||||| ||| ||||||| || |    
T  50815700 gtccccatgagcttagctcatttgataaaggataatgcacaatttgtgcaggggccggggttcgaaccc------cggacaccccacatattcatcttaa 50815793  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||||| |||||    
T  50815794 aggtgaatttctctagccactaggctacttgac 50815826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 36993037 - 36993154
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 162  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| ||||||      |||||||| || |||||||| |||||||    
T  36993037 cccatgagcttagctcatttgataagggataatgcacaatatgtgaaggggttggggtttgaaccc------cggacaccccaattattcatctttaagg 36993130  T
Q  163 tgaatttctctagccactaggcta 186  Q
    ||||||||||||||||||||||||    
T  36993131 tgaatttctctagccactaggcta 36993154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 51974740 - 51974866
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||      | |||||| | |||||||| || ||||    
T  51974740 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcgggattcgaac------ctcggacatcccacttatttatcttta 51974833  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    |||||||||| |||||||||||||||| |||||    
T  51974834 aggtgaatttatctagccactaggctacttgac 51974866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 27862933 - 27862862
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  27862933 gtccccatgagcttagctcatttgataagggataatgcacaatttgtgcaggggctggggttcgaaccccgg 27862862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 11491313 - 11491195
Alignment:
Q  69 gagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaat 167  Q
    ||||||||||||||||  ||||||||||||| ||| ||||||||||| || |||||||||||||      ||||| ||||||||||| ||||||||||||    
T  11491313 gagcttagctcatttgacaagggataatgcataatttgtgcaggggccggagttcgaaccccgg------acaccccacttattcatctttaaggtgaat 11491220  T
Q  168 ttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||| |||||    
T  11491219 ttctctagccactaggctacttgac 11491195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 169
Target Start/End: Original strand, 23448966 - 23449068
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcattttaa 160  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||      || ||||| ||||||||||||||||    
T  23448966 gtccccatgaacttagcttatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccc------cgaacaccccacttattcattttaa 23449059  T
Q  161 ggtgaattt 169  Q
    |||| ||||    
T  23449060 ggtggattt 23449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 35012423 - 35012355
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35012423 ttatttcgtcggataatttttcaccaataaattatatacatattcgtcggagatcctaaattatccaat 35012355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 45282173 - 45282241
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45282173 ttatttcgtcggataatttttcaccgataaattatatatatattcgtcggagatcctaaattatccaat 45282241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 45355817 - 45355694
Alignment:
Q  65 ccatgagcttagctc--atttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaag 161  Q
    |||||||||||||||  |||| |||||||||||||||||||||||| |||||  |||||||||||||      |||||||| ||||||||||| ||||||    
T  45355817 ccatgagcttagctctcatttagtaagggataatgcacaatatgtgtaggggtcggggttcgaaccc------cggacacc-cacttattcatctttaag 45355725  T
Q  162 gtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||| |||||    
T  45355724 gtgaatttctctagccactaggctacttgac 45355694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 45369558 - 45369435
Alignment:
Q  65 ccatgagcttagctc--atttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaag 161  Q
    |||||||||||||||  |||| |||||||||||||||||||||||| |||||  |||||||||||||      |||||||| ||||||||||| ||||||    
T  45369558 ccatgagcttagctctcatttagtaagggataatgcacaatatgtgtaggggtcggggttcgaaccc------cggacacc-cacttattcatctttaag 45369466  T
Q  162 gtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||| |||||    
T  45369465 gtgaatttctctagccactaggctacttgac 45369435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 37574266 - 37574391
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-tttta 159  Q
    |||||||||||||||||||||||||||||||||||||||   | | ||||||||| ||||||| |||||||||      |||| ||||||||||  ||||    
T  37574266 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatgcaggggccggggttcaaaccccggg------caccccacttattcaccttta 37574358  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||||| |||||    
T  37574359 aggtgaatttctctagccactaggctacttgac 37574391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 48404235 - 48404113
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggt 163  Q
    |||||||||||||||||||| |||| ||||||| | |||||||| ||| |  ||||||||||||||||      ||||||||||||||||| ||||||||    
T  48404235 ccatgagcttagctcatttgataagagataatgtataatatgtgtaggtgtcggggttcgaaccccgg------acacctcacttattcatctttaaggt 48404142  T
Q  164 gaatttctctagccactaggctatttgac 192  Q
    |||||||| |||||||||||||| |||||    
T  48404141 gaatttctttagccactaggctacttgac 48404113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 183
Target Start/End: Complemental strand, 2832173 - 2832056
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||||||||||||  |||||||||||||      |  ||||| ||||||||||| ||||    
T  2832173 gtccccatgagcttagctcatctggtaaggggtgatgcacaatatgtgcaggggtcggggttcgaaccc------caaacaccccacttattcatcttta 2832080  T
Q  160 aggtgaatttctctagccactagg 183  Q
    ||||||||| ||||||||||||||    
T  2832079 aggtgaattcctctagccactagg 2832056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 45630754 - 45630822
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  45630754 ttatttcgtcggataatttttcaccgataaattatatatatattcgtcggagatcttaaattatccaat 45630822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 64 - 192
Target Start/End: Complemental strand, 26885499 - 26885376
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 162  Q
    |||||||||||||||||||||| | ||||||||||||| ||| ||| ||||| |||||||||||||      |||||||  |||||||| || |||||||    
T  26885499 cccatgagcttagctcatttggcaggggataatgcacattatatgctggggccggggttcgaaccc------cggacactccacttatttatctttaagg 26885406  T
Q  163 tgaatttctctagccactaggctatttgac 192  Q
    || ||||||||||||||||||||| |||||    
T  26885405 tggatttctctagccactaggctacttgac 26885376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 38690660 - 38690779
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattc-attttaa 160  Q
    ||||||||||||||||||| |||||||||||||||||| | ||| ||||||||  |||||||||||||      |||||||| |||||||||   |||||    
T  38690660 tccccatgagcttagctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaaccc------cggacaccccacttattctcctttaa 38690753  T
Q  161 ggtgaatttctctagccactaggcta 186  Q
    ||||||||||||||||| ||||||||    
T  38690754 ggtgaatttctctagccgctaggcta 38690779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 64 - 171
Target Start/End: Complemental strand, 43362267 - 43362165
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 162  Q
    ||||||||||||||||||||| |||||||||||||||||||| | ||||||  |||||||||||||      |||||||| ||||||||||| |||||||    
T  43362267 cccatgagcttagctcatttgctaagggataatgcacaatatattcaggggtcggggttcgaaccc------cggacaccccacttattcatctttaagg 43362174  T
Q  163 tgaatttct 171  Q
    |||||||||    
T  43362173 tgaatttct 43362165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 192
Target Start/End: Original strand, 42154564 - 42154685
Alignment:
Q  66 catgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtg 164  Q
    |||||||||| || ||||||||||||||||| |||||||||||||| ||  |||||||||||||      ||||||| ||||||| |||| |||||||||    
T  42154564 catgagcttaacttatttggtaagggataattcacaatatgtgcagaggtcggggttcgaaccc------cggacacttcacttaatcatctttaaggtg 42154657  T
Q  165 aatttctctagccactaggctatttgac 192  Q
    ||||||||||||| || ||||| |||||    
T  42154658 aatttctctagccgctgggctacttgac 42154685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 65 - 185
Target Start/End: Complemental strand, 45848024 - 45847909
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggt 163  Q
    |||||| |||| |||||||| |||||||||||||| |||||||||||||   |||||||||||||      |||||||| ||||||||||| ||||||||    
T  45848024 ccatgaacttatctcatttgataagggataatgcataatatgtgcagggatcggggttcgaaccc------cggacaccccacttattcatctttaaggt 45847931  T
Q  164 gaatttctctagccactaggct 185  Q
    |||||||| ||||| |||||||    
T  45847930 gaatttctttagcccctaggct 45847909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 78 - 173
Target Start/End: Complemental strand, 22096476 - 22096386
Alignment:
Q  78 tcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaaggtgaatttctct 173  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||| |      |||||||| |||||||||| |||||||||||||||||||    
T  22096476 tcatttggtaagggataatgcacaatatgtgcaggggccgaggttcgaactc------cggacaccccacttattcatttttaaggtgaatttctct 22096386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 37889704 - 37889583
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaaggt 163  Q
    |||||||||||||||| || || | ||| |||| | | ||| ||||||||  ||||||||||||||||      |||||||||||||||| |||||||||    
T  37889704 ccatgagcttagctcacttcgttaaggacaatgtatattatatgcaggggtcggggttcgaaccccgg------acacctcacttattcacttttaaggt 37889611  T
Q  164 gaatttctctagccactaggctatttga 191  Q
    ||||||||||||||||||||||| ||||    
T  37889610 gaatttctctagccactaggctacttga 37889583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 52366204 - 52366267
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacc 128  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||| ||  |||||||||    
T  52366204 ccatgagtttaactcatttggtaagggataatgcacaatatgtgcaggggttgaagttcgaacc 52366267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 8716492 - 8716442
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcag 111  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  8716492 gtccccatgaacttagctcatttgataagggataatgcacaatatgtgcag 8716442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 25234946 - 25234835
Alignment:
Q  75 agctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttctct 173  Q
    |||||||||| ||||||||||||||||||| ||| ||||| || |||||||||||      | |||||| || |||||||| ||||||||||||||||||    
T  25234946 agctcatttgataagggataatgcacaataagtgtaggggttgaggttcgaaccc------cagacaccccagttattcatctttaaggtgaatttctct 25234853  T
Q  174 agccactaggctatttga 191  Q
    | ||||||| ||| ||||    
T  25234852 aaccactagactacttga 25234835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 41971401 - 41971351
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcag 111  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  41971401 gtccccatgagcttagctcatttggtaagtgataatgcacaatttgtgcag 41971351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 35909127 - 35909078
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggg 114  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  35909127 ccatgagcttagctcattttgtaagggataatgcacaatatatgcagggg 35909078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 49635425 - 49635474
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgca 110  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  49635425 gtccccatgagtttagctcatttggtaagggataatgcacaatatatgca 49635474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 8716547 - 8716599
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggg 113  Q
    ||||| || |||||| |||||||||||||||||||||||||||||||||||||    
T  8716547 gtccctataagcttatctcatttggtaagggataatgcacaatatgtgcaggg 8716599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 39387474 - 39387525
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggc 115  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  39387474 cccatgaacttagctcatttggtaagggataatgcataatttgtgcaggggc 39387525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 51707117 - 51707180
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacc 128  Q
    ||||||||||| ||||||| |||||||||||| || |||||||| | |||||||||||||||||    
T  51707117 ccatgagcttaactcatttagtaagggataatacataatatgtgtacgggctggggttcgaacc 51707180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 24570223 - 24570273
Alignment:
Q  81 tttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccg 131  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  24570223 tttggtaagggataatgcacaatatatgtaggggttggggttcgaaccccg 24570273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 192
Target Start/End: Complemental strand, 13539933 - 13539816
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcattttaaggtgaat 167  Q
    ||||||||||||| ||||||||||||||||||  || | ||||||| || ||||||||||||      |  |||||||| |||||||  |||||||||||    
T  13539933 tgagcttagctcacttggtaagggataatgca-tatttatgcagggactagggttcgaaccc------caaacacctcatttattcaccttaaggtgaat 13539841  T
Q  168 ttctctagccactaggctatttgac 192  Q
    |||||| ||| |||||||| |||||    
T  13539840 ttctctggccgctaggctacttgac 13539816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 25104320 - 25104372
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggg 113  Q
    |||||| ||||||||||||||| ||| | ||||||||||||||||||||||||    
T  25104320 gtccccttgagcttagctcattcggtgaaggataatgcacaatatgtgcaggg 25104372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 29771365 - 29771298
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcac 136  Q
    ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||||||    
T  29771365 tgagcttagctcaattggta-gggatattgcatattatatgcaggggccggggttcgaaccccgggcac 29771298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 48569248 - 48569181
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  48569248 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggctggggttcgaacccc 48569181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 20378686 - 20378725
Alignment:
Q  203 tataggagattttataattttaattggattctagatttta 242  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  20378686 tataggaaattttataattttaattggattctagatttta 20378725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 178
Target Start/End: Original strand, 43084444 - 43084552
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggt 163  Q
    ||||||||||| |||||||||||||| |||||||||||||| |  |||||  |||||||||| ||       ||  ||| ||||||||||| ||||||||    
T  43084444 ccatgagcttaactcatttggtaaggaataatgcacaatatatataggggtcggggttcgaatcc------tggttaccccacttattcatctttaaggt 43084537  T
Q  164 gaatttctctagcca 178  Q
    |||||||||||||||    
T  43084538 gaatttctctagcca 43084552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 8965092 - 8965161
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  8965092 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 8965161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 49901480 - 49901549
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  49901480 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 49901549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 19687690 - 19687629
Alignment:
Q  67 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacc 128  Q
    ||||| ||| |||||||| |||||||||||| ||||||||||| | ||||| ||||||||||    
T  19687690 atgagattaactcatttgataagggataatgtacaatatgtgctgaggctgaggttcgaacc 19687629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 24253196 - 24253139
Alignment:
Q  75 agctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||||||||| |||||||||||||||||| ||||| ||||   |||||||||||||||    
T  24253196 agctcatttgataagggataatgcacaatttgtgctggggtcagggttcgaaccccgg 24253139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 37935859 - 37935923
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaac 127  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||||||||||||||||||    
T  37935859 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggctggggttcgaac 37935923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 44251360 - 44251303
Alignment:
Q  136 cggacacctcacttattcat-tttaaggtgaatttctctagccactaggctatttgac 192  Q
    |||||||| || |||||||| |||||||||||||| ||||||| ||||||||||||||    
T  44251360 cggacaccccatttattcatctttaaggtgaatttttctagccgctaggctatttgac 44251303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 3764080 - 3764013
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| | || | ||| ||||||||||||||||||||||||    
T  3764080 tccccgtgagcttagctcagttggta-gggatattacatattatatgcaggggctggggttcgaacccc 3764013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 423
Target Start/End: Complemental strand, 13210031 - 13209995
Alignment:
Q  387 tatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||||||||||||| ||||||||||||||||||||    
T  13210031 tatatatatattcgtcagagatcctaaattatccaat 13209995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 25235869 - 25235802
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||| | |||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  25235869 tccccgtgagcttagcttagttggta-gggatattgcatattatatgcaggggctggggttcgaacccc 25235802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 423
Target Start/End: Complemental strand, 39719588 - 39719552
Alignment:
Q  387 tatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||||||||||||||||||||||||||||| ||||    
T  39719588 tatatatatattcgtcggagatcctaaattattcaat 39719552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 187
Target Start/End: Complemental strand, 19688882 - 19688851
Alignment:
Q  156 tttaaggtgaatttctctagccactaggctat 187  Q
    ||||||||||||||||||||||||||||||||    
T  19688882 tttaaggtgaatttctctagccactaggctat 19688851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 22341961 - 22341902
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttc 123  Q
    ||||||| ||||  |||||||||||  |||||||||||||||||| ||||| ||||||||    
T  22341961 cccatgaacttaaatcatttggtaaaagataatgcacaatatgtgtaggggttggggttc 22341902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 29889873 - 29889814
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaac 127  Q
    ||||||||||||| |  ||||||||||||||| | ||| ||||||||| |||||||||||    
T  29889873 tgagcttagctcactatgtaagggataatgcatattatatgcaggggccggggttcgaac 29889814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 56497675 - 56497605
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||||| ||||||||||||| ||||||| ||| |||||| ||||| |||| || |||||||||||| |||||    
T  56497675 gtccccgtgagcttagctcaattggtaa-ggacaatgcataatatatgcaaggtctggggttcgaatcccgg 56497605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 2931135 - 2931173
Alignment:
Q  145 cacttattcat-tttaaggtgaatttctctagccactag 182  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  2931135 cacttattcatctttaaggtgaatttctctagccactag 2931173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 6371112 - 6371181
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  6371112 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 6371181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 9761113 - 9761182
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| |||||||| |||| |||||| |||||| |||| | ||| |||||| |||||||||||||||||||    
T  9761113 tccccgtgagcttacctcagttggta-gggatattgcatattatatgcaggagctggggttcgaaccccgg 9761182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 11375961 - 11375892
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| ||| || |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  11375961 tccccgtgagcttagctcagttgata-gggatattgcatattatatgcaggggccggggttcgaaccccgg 11375892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 21935483 - 21935544
Alignment:
Q  70 agcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  21935483 agcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 21935544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 23705225 - 23705156
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||  |||||| |||||||||||||||||||    
T  23705225 tccccgtgagcttagctcagttggta-gggatattgcatattacatgcaggagctggggttcgaaccccgg 23705156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 26919540 - 26919471
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| |||||||||||||| ||||    
T  26919540 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagctggggttcgaactccgg 26919471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 31261803 - 31261753
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggg 114  Q
    ||||||||||||  ||||||| |||||||||||||||||| |||| |||||    
T  31261803 cccatgagcttaattcatttgataagggataatgcacaatgtgtgaagggg 31261753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 43147456 - 43147387
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  43147456 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 43147387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 43596893 - 43596962
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  43596893 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 43596962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 46105533 - 46105602
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  46105533 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 46105602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 46775102 - 46775033
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  46775102 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 46775033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 47934144 - 47934075
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| ||||||  ||| | ||| ||||||||| ||||||||||||||||    
T  47934144 tccccgtgagcttagctcagttggta-gggatatggcatattatatgcaggggccggggttcgaaccccgg 47934075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 55251423 - 55251354
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  55251423 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 55251354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 21200596 - 21200633
Alignment:
Q  140 cacctcacttattcattttaaggtgaatttctctagcc 177  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  21200596 caccccacttattcactttaaggtgaatttctctagcc 21200633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 24680158 - 24680094
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaac 127  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||||| |||||||||    
T  24680158 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggctgaggttcgaac 24680094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 46676565 - 46676497
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    |||||||||||||||||||| ||||||| ||| |||||| ||||| |||| || | ||||||||| ||||    
T  46676565 gtccccatgagcttagctcagttggtaa-ggacaatgcataatatatgcaaggtccggggttcgaccccc 46676497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 3815064 - 3815127
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||| | |||||| |||||| |||| | ||| |||||| |||||||||||||||||||    
T  3815064 tgagcttagcttagttggta-gggatattgcatattatatgcaggagctggggttcgaaccccgg 3815127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 22230500 - 22230437
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  22230500 tgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 22230437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 33933812 - 33933749
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcga 125  Q
    |||||| ||||||||||||| ||||| ||||| | |||| ||||| ||||||||| |||||||||    
T  33933812 gtccccgtgagcttagctcagttggt-agggacattgcataatatatgcaggggccggggttcga 33933749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 44602483 - 44602550
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| ||||   ||| ||||||||| ||||||||||||||    
T  44602483 tccccgtgagcttagctcagttggta-gggatattgcattttatatgcaggggccggggttcgaacccc 44602550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 50457780 - 50457717
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| ||||||||| ||| |||| | ||| |||||||||  |||||||||||||||    
T  50457780 tgagcttagctcagttggtaagg-atattgcatattatatgcaggggccagggttcgaaccccgg 50457717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 54593794 - 54593738
Alignment:
Q  136 cggacacctcacttattcattttaaggtgaatttctctagccactaggctatttgac 192  Q
    ||||| || |||||| ||||||||||||||||||||| |||  |||||||| |||||    
T  54593794 cggactccccacttaatcattttaaggtgaatttctcaagctgctaggctacttgac 54593738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 55055913 - 55055988
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacg 137  Q
    |||||| ||||||||||||| ||||| ||||| |||||| | | | ||||||||| | |||||||||||||| ||||    
T  55055913 gtccccgtgagcttagctcagttggt-agggacaatgcatattttatgcaggggccgaggttcgaaccccggacacg 55055988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 180; Significance: 5e-97; HSPs: 94)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 51 - 289
Target Start/End: Original strand, 36590373 - 36590610
Alignment:
Q  51 taaatatagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcactta 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  36590373 taaatatagggtccccatgagattagctcatttggtaagggataatgtacaatatgtgcaggggccgtggttcgaaccccgggcacggacacctcactta 36590472  T
Q  151 ttcattttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaa 250  Q
    |||||||||||||||||||||||||||||||| |||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36590473 ttcattttaaggtgaatttctctagccactagactatttgac-aaaaaaaaatataggagattttataattttaattggattctagattttactttgaaa 36590571  T
Q  251 aattactccaatatgaacaaattctagattttattttga 289  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  36590572 aattactccaatatgaacaaattttagattttattttga 36590610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 54 - 289
Target Start/End: Original strand, 30162643 - 30162876
Alignment:
Q  54 atatagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattc 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||    
T  30162643 atatagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaagggccggggttcgaa-cccgggcacggacacctcacttattc 30162741  T
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaaaat 253  Q
    ||||||||||||||||||||||| |||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30162742 attttaaggtgaatttctctagcaactaggctatttgac-aaaaaaaaatataggagattttataattttaattggattctagattttactttgaaaaat 30162840  T
Q  254 tactccaatatgaacaaattctagattttattttga 289  Q
    |||||||||||| |||||||||||||||||||||||    
T  30162841 tactccaatatgtacaaattctagattttattttga 30162876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 23156515 - 23156650
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaaaat 253  Q
    |||||||||||||||||||||||||| ||||||||||||          ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  23156515 attttaaggtgaatttctctagccaccaggctatttgacaaaaaaaaaatataggagattttataattttaattggattctatattttattttgaaaaat 23156614  T
Q  254 tactccaatatgaacaaattctagattttattttga 289  Q
    ||||| |||||||||||| |||||||||||||||||    
T  23156615 tactcgaatatgaacaaaatctagattttattttga 23156650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 33528307 - 33528181
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||      | |||||| ||||||||||| ||||    
T  33528307 gtccccatgagcttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccc------cagacaccccacttattcatcttta 33528214  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||||| |||||    
T  33528213 aggtgaatttctctagccactaggctacttgac 33528181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 63 - 192
Target Start/End: Original strand, 47864631 - 47864755
Alignment:
Q  63 ccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaag 161  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||||||| ||||||||||| ||||||    
T  47864631 ccccataagcttagctcatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccc------cggacaccccacttattcatctttaag 47864724  T
Q  162 gtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||| |||||    
T  47864725 gtgaatttctctagccactaggctacttgac 47864755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 39739270 - 39739393
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||      |||||||||||||||||||| |||||||    
T  39739270 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggattggggttcgaaccc------cggacacctcacttattcatctttaagg 39739363  T
Q  163 tgaatttctctagccactaggctatttgac 192  Q
    |||||||||||||||||||| ||| |||||    
T  39739364 tgaatttctctagccactagactacttgac 39739393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 23156003 - 23155869
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaaaat 253  Q
    |||||||||||| ||||||||||||| ||||||||||||          ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  23156003 attttaaggtga-tttctctagccaccaggctatttgacaaaaaaaatatataggagattttataattttaattggattctatattttattttgaaaaat 23155905  T
Q  254 tactccaatatgaacaaattctagattttattttga 289  Q
    ||||| |||||||||||| |||||||||||||||||    
T  23155904 tactcgaatatgaacaaaatctagattttattttga 23155869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 25165434 - 25165556
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca----ttt 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||     || ||||||||||    |||    
T  25165434 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggaccggggttcgaaccccggacac-----ccccacttattcatcttttt 25165528  T
Q  158 taaggtgaatttctctagccactaggct 185  Q
    ||||||||||||||||||||||||||||    
T  25165529 taaggtgaatttctctagccactaggct 25165556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 35343595 - 35343729
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaaaat 253  Q
    |||||||||| |||||||||||| |||||||||||| ||          ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  35343595 attttaaggtaaatttctctagctactaggctatttaacaaaaaaaaa-tataggagattttataattttaattggattctatattttattttgaaaaat 35343693  T
Q  254 tactccaatatgaacaaattctagattttattttga 289  Q
    ||||| |||||||||||| |||||||||||||||||    
T  35343694 tactcgaatatgaacaaaatctagattttattttga 35343729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 53734031 - 53733894
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntata--ggagattttataattttaattggattctagattttactttgaaaa 251  Q
    ||||||||||||||||||||| |||||||||||||||||          ||||  ||||||||||||||||||||||||||||| |||||| ||||||||    
T  53734031 attttaaggtgaatttctctaaccactaggctatttgacaaaaaaaaaatatataggagattttataattttaattggattctatattttattttgaaaa 53733932  T
Q  252 attactccaatatgaacaaattctagattttattttga 289  Q
    ||||||| ||||| |||||| |||||||||||||||||    
T  53733931 attactcgaatatcaacaaaatctagattttattttga 53733894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 203 - 289
Target Start/End: Original strand, 33543709 - 33543795
Alignment:
Q  203 tataggagattttataattttaattggattctagattttactttgaaaaattactccaatatgaacaaattctagattttattttga 289  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  33543709 tataggagattttataattttaattggattctatattttattttgaaaaattactcgaatatgaacaaaatctagattttattttga 33543795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 11483606 - 11483732
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| |      |||||||| ||||||||||| ||||    
T  11483606 gtccccatgagcttagctcatttggtaagggataatgcaaaatatgtgcaggggccagggttcgaactc------cggacaccccacttattcatcttta 11483699  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||| ||||| ||| |||||    
T  11483700 aggtgaatttctctagcaactagactacttgac 11483732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 46247253 - 46247381
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||   ||| |  ||||||||| ||||    
T  46247253 gtccccatgagcttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacac-cccactt--cttattcatcttta 46247349  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    |||||||||||||| |||||||||||| |||||    
T  46247350 aggtgaatttctct-gccactaggctacttgac 46247381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 31902979 - 31902842
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnn--tataggagattttataattttaattggattctagattttactttgaaaa 251  Q
    ||||||||||||||||||||| ||||||| |||||||||            ||||||||||||||||||||||||||||||||| |||||| ||| ||||    
T  31902979 attttaaggtgaatttctctaaccactagactatttgacaaaaaaaaaaaatataggagattttataattttaattggattctatattttattttaaaaa 31902880  T
Q  252 attactccaatatgaacaaattctagattttattttga 289  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  31902879 attactcgaatatgaacaaaatctagattttattttga 31902842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 50381707 - 50381826
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||  |||||||||| ||      |||||||| ||||||||||| ||||    
T  50381707 gtccccatgagcttaactcatttggtaagggataatgcacaatatatgcaggggtcggggttcgaatcc------cggacaccccacttattcatcttta 50381800  T
Q  160 aggtgaatttctctagccactaggct 185  Q
    ||||||||||||||||||| ||||||    
T  50381801 aggtgaatttctctagccattaggct 50381826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 60 - 192
Target Start/End: Original strand, 55426106 - 55426229
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcatttta 159  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| | |||||||||||      |||||||| |||| ||    ||||    
T  55426106 ggtccccatgagcttagctcatttggtaaaggataatgcacaatatgtgcatgggccgaggttcgaaccc------cggacaccccactcat---cttta 55426196  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||||| |||||    
T  55426197 aggtgaatttctctagccactaggctacttgac 55426229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 27817169 - 27817044
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||| || |||||||||       |||||||| || |||||||| ||||    
T  27817169 gtccctatgagcttacctcatttggtaagggataatgcacaatttgtgcaggggccggagttcgaacc-------cggacaccccatttattcatcttta 27817077  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    || |||||||||||||||||||||||| |||||    
T  27817076 agttgaatttctctagccactaggctacttgac 27817044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 62 - 174
Target Start/End: Original strand, 29226320 - 29226427
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaa 160  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||      || ||||| ||||||||||| |||||    
T  29226320 tccccatgagcttagctcatttggtaagggataacacacaatatgtgcaggggccggggttcgaaccc------cgtacaccccacttattcatctttaa 29226413  T
Q  161 ggtgaatttctcta 174  Q
    ||||||||||||||    
T  29226414 ggtgaatttctcta 29226427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 46798575 - 46798701
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| |||||||||       ||||||| ||||||||||| ||||    
T  46798575 gtccccatgagcttaactcatttggtgagggataatgcacaatatgtgcaggggccgggattcgaaccc------tggacaccccacttattcatcttta 46798668  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||  ||||||||| ||||||||||| |||||    
T  46798669 aggtagatttctctaaccactaggctacttgac 46798701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 33543924 - 33543992
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33543924 ttatttcgtcggataatttttcaccgataaattatatatatattcgtcggagatcctaaattatccaat 33543992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 36590740 - 36590808
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  36590740 ttattttgtcggataatttttcaccgataaattttatatatattcgtcggagatcctaaattatccaat 36590808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 37472471 - 37472539
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37472471 ttatttcgtcggataatttttcaccgataaattatatatatattcgtcggagatcctaaattatccaat 37472539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 65 - 172
Target Start/End: Original strand, 34225192 - 34225296
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaaggt 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| |||||||| |   |||||||||||||||||  ||||||||    
T  34225192 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggct-agattcaaaccccggac---gacacctcacttattcacctttaaggt 34225287  T
Q  164 gaatttctc 172  Q
    |||||||||    
T  34225288 gaatttctc 34225296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 2259150 - 2259219
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||    
T  2259150 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggagttcaaacccc 2259219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 27471513 - 27471623
Alignment:
Q  77 ctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttctctag 175  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||||||||||||      |||||||| ||||||||||| |||||||| |||||||||||    
T  27471513 ctcatttggtaagggataatgcataatatgtacaggggttggggttcgaaccc------cggacaccccacttattcatctttaaggtaaatttctctag 27471606  T
Q  176 ccactaggctatttgac 192  Q
    ||||||| ||| |||||    
T  27471607 ccactagactacttgac 27471623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 362 - 423
Target Start/End: Original strand, 35343857 - 35343918
Alignment:
Q  362 gtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35343857 gtcggataatttttcaccgataaattatatatatattcgtcggagatcctaaattatccaat 35343918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 355 - 422
Target Start/End: Complemental strand, 53733763 - 53733696
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaa 422  Q
    |||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  53733763 ttatttcgtcggataatttttcaccgataaattatatatatatttgtcggagatcctaaattatccaa 53733696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 166781 - 166907
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-tttta 159  Q
    |||||| ||||||||||||| |||||||||||||||||| ||| | ||||||||| |||||||||||||      | |||||||||||||||||  ||||    
T  166781 gtccccgtgagcttagctcacttggtaagggataatgcataatttatgcaggggccggggttcgaaccc------cagacacctcacttattcaccttta 166874  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    | |||||||||| ||||| |||||||| |||||    
T  166875 aagtgaatttctttagccgctaggctacttgac 166907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 29645933 - 29645803
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcaca----atatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat- 155  Q
    |||||||||||||| |||||||||||||| ||| ||  |||    |||||||||||||| ||||||||||||||||      ||||| |||||||||||     
T  29645933 gtccccatgagcttggctcatttggtaagtgatcatatacagttaatatgtgcaggggccggggttcgaaccccgg------acaccccacttattcatc 29645840  T
Q  156 tttaaggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  29645839 tttaaggtgaatttctctagccactagactacttgac 29645803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 182
Target Start/End: Complemental strand, 986021 - 985905
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||| ||||| || ||||||||||| |||||||||||| |||||||||||||||||  ||| ||      |||||||| ||||||||||| || |    
T  986021 gtccccatgtgcttaacttatttggtaaggcataatgcacaatttgtgcaggggctggggtctgaatcc------cggacaccccacttattcatcttaa 985928  T
Q  160 aggtgaatttctctagccactag 182  Q
    |||||||||||||||||||||||    
T  985927 aggtgaatttctctagccactag 985905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 75 - 192
Target Start/End: Complemental strand, 31435589 - 31435477
Alignment:
Q  75 agctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttctct 173  Q
    |||||||  ||||||||||||||||||||||||| ||||| ||||||||||||      | |||||| | ||||||||||| ||||||||||||||||||    
T  31435589 agctcatccggtaagggataatgcacaatatgtgtaggggttggggttcgaac------ctcggacatcccacttattcatctttaaggtgaatttctct 31435496  T
Q  174 agccactaggctatttgac 192  Q
    ||||||||| ||| |||||    
T  31435495 agccactagactacttgac 31435477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 9321057 - 9320935
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggt 163  Q
    ||||||| |||||||||||| |||||||||||| ||||| |||||||||| ||||||||||| ||      || ||||| ||||||||||| || ||| |    
T  9321057 ccatgagtttagctcatttgataagggataatgtacaatttgtgcaggggttggggttcgaaacc------cgaacaccccacttattcatcttaaagat 9320964  T
Q  164 gaatttctctagccactaggctatttgac 192  Q
    ||||||||||| ||||||||||| |||||    
T  9320963 gaatttctctaaccactaggctacttgac 9320935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 16141455 - 16141329
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||| || |||||||||||||||| |      | |||||| ||||||||||| || |    
T  16141455 gtccccatgagcatagttcatttgataagggataatgcacaatatgtacaagggctggggttcgaactc------cagacaccccacttattcatcttaa 16141362  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    |||| ||||| |||| ||||||||||| |||||    
T  16141361 aggtaaatttatctaaccactaggctacttgac 16141329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 22602293 - 22602179
Alignment:
Q  73 ttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttct 171  Q
    |||||||||||||||||| ||||||||||||||||| |||||  | |||||||| ||| |      ||| | ||||||||||| ||||||||||||||||    
T  22602293 ttagctcatttggtaaggaataatgcacaatatgtgtaggggacgaggttcgaatcccag------acatcgcacttattcatctttaaggtgaatttct 22602200  T
Q  172 ctagccactaggctatttgac 192  Q
    ||||||||||||||| |||||    
T  22602199 ctagccactaggctacttgac 22602179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 27394502 - 27394626
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaa 160  Q
    ||||| |||||| |||||| ||||||||||||||||||   ||| |||||||||||||||| ||||||      |||||||| ||||||||||  |||||    
T  27394502 tccccgtgagctaagctcacttggtaagggataatgca-tttatatgcaggggctggggtttgaaccc------cggacaccccacttattcacctttaa 27394594  T
Q  161 ggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||| |||||||| |||||    
T  27394595 ggtgaatttctctagccgctaggctacttgac 27394626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 32421341 - 32421408
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacc 128  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  32421341 gtccccatgagcttagctcatctggtaagggataatgcataatatatgcaggggtcggggttcgaacc 32421408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 8258145 - 8258215
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccg 131  Q
    ||||||||||||||| |||||||||||| || ||||||||||||||||||||||  || ||||||||||||    
T  8258145 gtccccatgagcttaactcatttggtaatggttaatgcacaatatgtgcaggggtcggagttcgaaccccg 8258215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 31419583 - 31419645
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    |||||||| |||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  31419583 tgagcttaactcatttggtaagggacaacgcacaatatgtgtaggggctggggttcgaacccc 31419645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 60 - 192
Target Start/End: Original strand, 49429453 - 49429579
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-tttt 158  Q
    |||||||||||||||| |||||||||||||||||||||||   | | ||||||| |  ||||||||||||      |||||||| ||||||||||  |||    
T  49429453 ggtccccatgagcttaactcatttggtaagggataatgca-tttgtatgcagggaccagggttcgaaccc------cggacaccccacttattcaccttt 49429545  T
Q  159 aaggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||| ||| ||||||||||    
T  49429546 aaggtgaatttctctagccgctaagctatttgac 49429579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 7517934 - 7518003
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccg 131  Q
    ||||||| ||||||||||||||||||||||||| |||||||| |||||||| || | |||||||||||||    
T  7517934 tccccattagcttagctcatttggtaagggatattgcacaatttgtgcaggagccgcggttcgaaccccg 7518003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 423
Target Start/End: Complemental strand, 23155746 - 23155688
Alignment:
Q  363 tcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  23155746 tcggataatttttcaccgataaattatatatat--tcgtcggagatcctaaattatccaat 23155688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 44062113 - 44062018
Alignment:
Q  91 gataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttctctagccactaggctattt 189  Q
    ||||||||||||||||||||||||| || |||||||||||       |||||| ||||||||||| |||||||||||| |||||||||||||| ||| ||    
T  44062113 gataatgcacaatatgtgcaggggccggagttcgaacccc-------gacaccccacttattcatctttaaggtgaatgtctctagccactagactactt 44062021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 33780308 - 33780363
Alignment:
Q  73 ttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacc 128  Q
    ||||||||||||||||||||||||||||||||| | |||||| |||||||||||||    
T  33780308 ttagctcatttggtaagggataatgcacaatatatacaggggttggggttcgaacc 33780363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 38668135 - 38668247
Alignment:
Q  75 agctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttctct 173  Q
    |||||||||||||||||||||||||||||| ||| ||||| ||| |||  || ||| |      ||||| ||||||||||| ||||||||||||||||||    
T  38668135 agctcatttggtaagggataatgcacaatacgtgtaggggttggagttgaaatccctg------acaccccacttattcatctttaaggtgaatttctct 38668228  T
Q  174 agccactaggctatttgac 192  Q
    ||||||||| ||| |||||    
T  38668229 agccactagactacttgac 38668247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 45431620 - 45431740
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-tttta 159  Q
    |||||||||||||||||||| |||||||||||||||||  | | | ||||||||   ||||||||||||      |||||||| ||||||||||  ||||    
T  45431620 gtccccatgagcttagctcacttggtaagggataatgcgtattttatgcaggggtcagggttcgaaccc------cggacaccccacttattcaccttta 45431713  T
Q  160 aggtgaatttctctagccactaggcta 186  Q
    ||||||||||| |||||| ||||||||    
T  45431714 aggtgaatttccctagccgctaggcta 45431740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 42913497 - 42913431
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaac 127  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||||||||||  || |||||||||    
T  42913497 gtccccacgagcttagctcatttgctaagggaaaatgcacaatatgtgcagggattgaggttcgaac 42913431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 1084130 - 1084077
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggg 114  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  1084130 gtccccatgagcttagctcatttgttaaaggataatgtacaatatgtgcagggg 1084077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 72 - 192
Target Start/End: Complemental strand, 1102787 - 1102672
Alignment:
Q  72 cttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttc 170  Q
    |||||||||  ||||||||||||||||| ||| | ||||||||  || |||||||||      | ||||||| ||||||||||  |||||||||||||||    
T  1102787 cttagctcacctggtaagggataatgcataatttatgcaggggacggagttcgaacc------atggacaccccacttattcacctttaaggtgaatttc 1102694  T
Q  171 tctagccactaggctatttgac 192  Q
    ||||||| |||||||| |||||    
T  1102693 tctagccgctaggctacttgac 1102672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 6488122 - 6488189
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||||||||||||||||| |||||| |||||| |||| | ||| |||||||||| |||||||||||||    
T  6488122 tccccatgagcttagctcaattggta-gggatattgcatattatatgcaggggctagggttcgaacccc 6488189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 19999865 - 19999932
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  19999865 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggctggggttcgaacccc 19999932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 22502003 - 22501936
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  22502003 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggctggggttcgaacccc 22501936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 423
Target Start/End: Original strand, 23156765 - 23156801
Alignment:
Q  387 tatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||||||||||||||||||||||||||||||||||    
T  23156765 tatatatatattcgtcggagatcctaaattatccaat 23156801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 423
Target Start/End: Original strand, 30162976 - 30163012
Alignment:
Q  387 tatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||||||||||||||||||||||||||||||||||    
T  30162976 tatatatatattcgtcggagatcctaaattatccaat 30163012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 37756502 - 37756446
Alignment:
Q  74 tagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||||| ||| |||||||||||||| ||| | ||||||||||||||||||||||||    
T  37756502 tagctcacttgataagggataatgcataatttatgcaggggctggggttcgaacccc 37756446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 53207960 - 53208031
Alignment:
Q  57 tagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    |||||||||| ||||||||||||| ||||||||||  |||||| ||||| |||| || |||||||||||||||    
T  53207960 tagggtccccgtgagcttagctcagttggtaaggg-caatgcataatatatgcaaggtctggggttcgaaccc 53208031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 388 - 423
Target Start/End: Original strand, 11235630 - 11235665
Alignment:
Q  388 atatatatattcgtcggagatcctaaattatccaat 423  Q
    ||||||||||||||||||||||||||||||||||||    
T  11235630 atatatatattcgtcggagatcctaaattatccaat 11235665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 192
Target Start/End: Complemental strand, 1325420 - 1325307
Alignment:
Q  75 agctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttctct 173  Q
    |||| |||||||||||||||||||||||||| | |||||   ||| |||||||||||| |||     || || |||||||| |||||| ||||||||| |    
T  1325420 agcttatttggtaagggataatgcacaatatatacagggatcgggattcgaaccccggacac-----ccccatttattcatctttaagatgaatttcttt 1325326  T
Q  174 agccactaggctatttgac 192  Q
    ||||||||| ||| |||||    
T  1325325 agccactagactacttgac 1325307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 50271723 - 50271761
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgca 99  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  50271723 gtccccatgagcttagctcatttggtaagagataatgca 50271761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 7239799 - 7239852
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggg 114  Q
    |||||| ||||||||| ||||||||||||||||| | ||||||||||| |||||    
T  7239799 gtccccgtgagcttagttcatttggtaagggatattacacaatatgtgtagggg 7239852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 25939002 - 25938935
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| |||| |||||||| |||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  25939002 tccccgtgagtttagctcagttggta-gggatattgcatattatatgcaggggctggggttcgaacccc 25938935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 45118637 - 45118704
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    |||||||||||||||||||| ||||| ||||| | ||||  |||| ||||||||| |||||||||||||    
T  45118637 gtccccatgagcttagctcagttggt-agggacattgcattatatatgcaggggccggggttcgaaccc 45118704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 48739816 - 48739749
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| ||||   ||| ||||||||||||||||||||||||    
T  48739816 tccccgtgagcttagctcagttggta-gggatattgcattttatatgcaggggctggggttcgaacccc 48739749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 53347362 - 53347295
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||| ||||||||||||||||    
T  53347362 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcagggactggggttcgaacccc 53347295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 882387 - 882453
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| ||||||||||||||||    
T  882387 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagctggggttcgaaccc 882453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 33830454 - 33830415
Alignment:
Q  77 ctcatttggtaagggataatgcacaatatgtgcaggggct 116  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  33830454 ctcatttggtaagagataatgcacaatatatgcaggggct 33830415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 38869282 - 38869223
Alignment:
Q  72 cttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccg 131  Q
    |||| |||| |||||||||||||||||| ||||  ||||||||  |||||||||||||||    
T  38869282 cttaactcacttggtaagggataatgcataatacatgcaggggtcggggttcgaaccccg 38869223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 2368940 - 2369001
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||||||||||| ||| || |||||| |||| | ||| ||||||||||||||||||||||||    
T  2368940 tgagcttagctcagttgtta-gggatattgcatattatatgcaggggctggggttcgaacccc 2369001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 3748674 - 3748605
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| || | | ||| |||||||| |||||||||||||||||    
T  3748674 tccccgtgagcttagctcagttggta-gggatattgtatattatatgcaggggttggggttcgaaccccgg 3748605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 7269953 - 7270022
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| |||||||||||||| ||||    
T  7269953 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagctggggttcgaactccgg 7270022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 17218486 - 17218555
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||||||||| ||||| ||||||| |||| | ||| |||| |||| ||||||| ||||||||    
T  17218486 tccccatgagcttagctcagttggt-agggatattgcatattatatgcaagggccggggttcaaaccccgg 17218555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 28951712 - 28951781
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    |||||||||||||||| |||| |||| |||| | | |||| ||| | ||||||||||||||||||||||||    
T  28951712 ggtccccatgagcttaactcaattggcaagg-acattgcataatttatgcaggggctggggttcgaacccc 28951781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 31327573 - 31327504
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  31327573 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 31327504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 31327790 - 31327721
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  31327790 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 31327721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 32256626 - 32256557
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| ||||   ||| ||||||||| ||||||||||||||||    
T  32256626 tccccgtgagcttagctcagttggta-gggatattgcatgttatatgcaggggccggggttcgaaccccgg 32256557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 34102683 - 34102614
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||| ||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  34102683 tccccgtgagcttagttcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 34102614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 37800683 - 37800614
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  37800683 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 37800614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 40548301 - 40548370
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  40548301 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 40548370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 40933903 - 40933834
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  40933903 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 40933834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 41936471 - 41936410
Alignment:
Q  70 agcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  41936471 agcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 41936410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 45701342 - 45701411
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  45701342 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 45701411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 47098736 - 47098797
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||    
T  47098736 tgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaacccc 47098797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 50496886 - 50496817
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  50496886 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 50496817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 53163592 - 53163661
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| || |||||| ||||||||||||||||    
T  53163592 tccccgtgagcttagctcagttggta-gggatattgcatattatatgtaggggccggggttcgaaccccgg 53163661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 54457153 - 54457272
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaa 166  Q
    |||||||| |||| ||| |||| ||||||||| ||| | || ||| |||||||||  ||||||||      ||||| || |||||||  |||||||||||    
T  54457153 tgagcttaactcacttgataagagataatgcataatttatgtaggagctggggtttaaaccccgg------acaccccatttattcacctttaaggtgaa 54457246  T
Q  167 tttctctagccactaggctatttgac 192  Q
    ||||||||||| |||||||| |||||    
T  54457247 tttctctagccgctaggctacttgac 54457272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 8931010 - 8930953
Alignment:
Q  136 cggacacctcacttattcat-tttaaggtgaatttctctagccactaggctatttgac 192  Q
    |||||||| ||||||||||  ||||| |||||||||||||||| |||||||| |||||    
T  8931010 cggacaccccacttattcacctttaaagtgaatttctctagccgctaggctacttgac 8930953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 9489477 - 9489538
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    |||| |||||||  ||||||||||||||||||  || | ||||||||| |||||||||||||    
T  9489477 tgagtttagctcgcttggtaagggataatgcattatgtatgcaggggccggggttcgaaccc 9489538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 21914138 - 21914070
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||||||||||||| |||| ||||||| ||| |||||| ||||| |||| ||  |||||||||||||||    
T  21914138 gtccccatgagcttaactcagttggtaa-ggacaatgcataatatatgcaaggtatggggttcgaacccc 21914070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 40415593 - 40415556
Alignment:
Q  138 gacacctcacttattca-ttttaaggtgaatttctcta 174  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  40415593 gacacctcacttattcacttttaaggtgaatttctcta 40415556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 4139004 - 4139067
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  4139004 tgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 4139067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 6920034 - 6919967
Alignment:
Q  63 ccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccg 131  Q
    |||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || |||||||||||||||    
T  6920034 ccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccg 6919967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 25505768 - 25505701
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    ||||||||||||||| |||| || |||||| | |||||| ||||| |||| || |||||||||||||||    
T  25505768 gtccccatgagcttaactcagtttgtaagg-acaatgcataatatatgcaaggtctggggttcgaaccc 25505701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 32776215 - 32776278
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||||| |||| | |||| ||| | ||||||||| ||||||||||||||||    
T  32776215 tgagcttagctcagttggta-gggacattgcataatttatgcaggggccggggttcgaaccccgg 32776278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 34898839 - 34898772
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||| ||| |||||| |||||| |||| | ||| ||||||||||| ||||||||||||    
T  34898839 tccccgtgagcttagttcagttggta-gggatattgcatattatatgcaggggctgaggttcgaacccc 34898772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 39719939 - 39720002
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||| |||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  39719939 tgagtttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 39720002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 2e-75; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 52 - 289
Target Start/End: Original strand, 27054674 - 27054914
Alignment:
Q  52 aaatatagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttat 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||  | ||||||||||||    
T  27054674 aaatatagggtccccatgagcttagctcatttggtaagggataatgcacaatatctgcaggggccggggttcgaacccccggcataggcacctcacttat 27054773  T
Q  152 tcat-tttaaggtgaatttctctagccactaggctatttgac--nnnnnnnnnntataggagattttataattttaattggattctagattttactttga 248  Q
    |||| ||||||||||||||||||||||||||||||| |||||            |||| |||||||||||||||||||||| |||||||||||| |||||    
T  27054774 tcatctttaaggtgaatttctctagccactaggctacttgacaaaaaaaataaatataagagattttataattttaattgggttctagattttattttga 27054873  T
Q  249 aaaattactccaatatgaacaaattctagattttattttga 289  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  27054874 aaaattactcgaatatgaacaaaatctagattttattttga 27054914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 24134725 - 24134607
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaa 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||      |||||||| ||||||||||| |||||    
T  24134725 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccc------cggacaccccacttattcatctttaa 24134632  T
Q  161 ggtgaatttctctagccactaggct 185  Q
    |||||||||||||||||||||||||    
T  24134631 ggtgaatttctctagccactaggct 24134607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 34702415 - 34702289
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||      |||||||||||||||||||| ||||    
T  34702415 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccc------cggacacctcacttattcatcttta 34702322  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    || ||||||||| |||||||||| ||| |||||    
T  34702321 agatgaatttctttagccactagactacttgac 34702289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 43109336 - 43109214
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggt 163  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||      ||||||||||| |||||||| ||||||||    
T  43109336 ccatgagcttagctcatttggtaagggataatgcaaaatatgtgcaggggccggggttcgaaccc------cggacacctcatttattcatctttaaggt 43109243  T
Q  164 gaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||| |||||    
T  43109242 gaatttctctagccactaggctacttgac 43109214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 154 - 286
Target Start/End: Original strand, 34661096 - 34661228
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaaaat 253  Q
    |||||||||| |||||||||||| |||||||||||||||          ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  34661096 attttaaggtaaatttctctagctactaggctatttgacaaaaaaaaaatataggagattttataattttaattggattctatattttattttgaaaaat 34661195  T
Q  254 tactccaatatgaacaaattctagattttattt 286  Q
    ||||| |||||||||||| ||||||||||||||    
T  34661196 tactcgaatatgaacaaaatctagattttattt 34661228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 47651868 - 47651990
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcattttaaggt 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||        |||| | |||||||||||||||||||    
T  47651868 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaatcc------tagacatcccacttattcattttaaggt 47651961  T
Q  164 gaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||| ||||| |||||    
T  47651962 gaatttctctagccactgggctacttgac 47651990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 15417920 - 15417793
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttt 158  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||      || |||||||| ||||||||||| |||    
T  15417920 ggtccccatgagcttagctcatttggtaaaggataatgcacaatatgtgtaggggctggggttcgaa------gctcggacaccccacttattcatcttt 15417827  T
Q  159 aaggtgaatttctctagccactaggctatttgac 192  Q
    ||| ||||||||||||| |||||||||| |||||    
T  15417826 aagatgaatttctctagtcactaggctacttgac 15417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 203 - 289
Target Start/End: Complemental strand, 46602492 - 46602406
Alignment:
Q  203 tataggagattttataattttaattggattctagattttactttgaaaaattactccaatatgaacaaattctagattttattttga 289  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  46602492 tataggagattttataattttaattggattctagattttattttgaaaaattactcgaatatgaacaaaatctagattttattttga 46602406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 2017786 - 2017672
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcattttaa 160  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||      |||||||| ||||| ||||||||||    
T  2017786 gtcctcatgagcttagctcatttggtaagggataatgcacaatatgtgcataggctggggttcgaatcc------cggacaccccacttgttcattttaa 2017693  T
Q  161 ggtgaatttctctagccacta 181  Q
    |||||||||||||||||||||    
T  2017692 ggtgaatttctctagccacta 2017672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 49619965 - 49620091
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||  ||||      |||||||| ||||||||||| ||||    
T  49619965 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcagaccc------cggacaccccacttattcatcttta 49620058  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    | ||||||||||||||||||||||||| |||||    
T  49620059 aagtgaatttctctagccactaggctacttgac 49620091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 50011500 - 50011610
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      | |||| | ||||||||||| ||||    
T  50011500 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc------cagacatcccacttattcatcttta 50011593  T
Q  160 aggtgaatttctctagc 176  Q
    |||||||||||||||||    
T  50011594 aggtgaatttctctagc 50011610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 203 - 289
Target Start/End: Original strand, 15551007 - 15551093
Alignment:
Q  203 tataggagattttataattttaattggattctagattttactttgaaaaattactccaatatgaacaaattctagattttattttga 289  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||| |||||||||||||||||    
T  15551007 tataggagattttataattttaattggattctagattttattttgaaaaattaccctaatatgaacaaaatctagattttattttga 15551093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 203 - 289
Target Start/End: Original strand, 48813803 - 48813889
Alignment:
Q  203 tataggagattttataattttaattggattctagattttactttgaaaaattactccaatatgaacaaattctagattttattttga 289  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  48813803 tataggagattttataattttaattggattatagattttattttgaaaaattactcgaatatgaacaaaatctagattttattttga 48813889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 40061436 - 40061562
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||  |||||||||||||||||| |      |||||||| ||||||||||| ||||    
T  40061436 gtccccatgagcttaactcatttggtaagggatagtgcacaatatgtataggggctggggttcgaactc------cggacaccccacttattcatcttta 40061529  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||| ||||||||||||||||||||| |||||    
T  40061530 aggtggatttctctagccactaggctacttgac 40061562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 61 - 186
Target Start/End: Original strand, 50065003 - 50065123
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||       | |||||||| ||||||||||| ||||    
T  50065003 gtccccataagcttagctcatttgataagggataatgcacaatatgtgcagggaccggggttcgaa------tctcggacaccccacttattcatcttta 50065096  T
Q  160 aggtgaatttctctagccactaggcta 186  Q
    |||||||||||||||||||||| ||||    
T  50065097 aggtgaatttctctagccactaagcta 50065123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 64 - 192
Target Start/End: Complemental strand, 14262820 - 14262697
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 162  Q
    |||||||| ||| |||||||| |||||||||||||||||||| ||||||||  |||||||||||||      ||||||||  |||||||||| |||||||    
T  14262820 cccatgagattaactcatttgataagggataatgcacaatatatgcaggggtcggggttcgaaccc------cggacaccctacttattcatctttaagg 14262727  T
Q  163 tgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||| ||||||||||    
T  14262726 tgaatttctctagccactaagctatttgac 14262697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 64 - 192
Target Start/End: Complemental strand, 48497312 - 48497189
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 162  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||      |||||||  || |||||||| |||||||    
T  48497312 cccatgagtttagctcatttggtaagggataatgcacaatatgtgcaggggccggagttcgaatcc------cggacactccatttattcatctttaagg 48497219  T
Q  163 tgaatttctctagccactaggctatttgac 192  Q
    | |||||||||||||||||||||| |||||    
T  48497218 taaatttctctagccactaggctacttgac 48497189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 34661355 - 34661423
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34661355 ttatttcgtcggataatttttcaccgataaattatatatatattcgtcggagatcctaaattatccaat 34661423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 7438617 - 7438740
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 162  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||  ||||||||||| |      |||||||| ||||||||||| || ||||    
T  7438617 cccatgagcttagctcatttggtaagggataatgcacaatttgtgtaggggtcggggttcgaactc------cggacaccccacttattcatcttaaagg 7438710  T
Q  163 tgaatttctctagccactaggctatttgac 192  Q
    ||||||||| |||||||||| ||| |||||    
T  7438711 tgaatttctttagccactagactacttgac 7438740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 22386339 - 22386269
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  22386339 ggtccccacgagcttagctcatttggtaagggattatgcacaatatgtgcaggggttggggttcgaacccc 22386269  T

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Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 64 - 192
Target Start/End: Complemental strand, 47428994 - 47428871
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 162  Q
    |||||||| ||||||||| |||||||||||| | ||||||||||||| ||||||||||||||||||      |  ||||| ||||||||||| ||||| |    
T  47428994 cccatgagtttagctcatctggtaagggatagtacacaatatgtgcatgggctggggttcgaaccc------caaacaccccacttattcatctttaaag 47428901  T
Q  163 tgaatttctctagccactaggctatttgac 192  Q
    ||||||||| ||||||||| ||||||||||    
T  47428900 tgaatttctttagccactaagctatttgac 47428871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 10123150 - 10123029
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggt 163  Q
    ||||||||||| ||||||||||||||||||||  |||||||||| |||||  ||||||||||||||        ||||| ||||||||||| ||||||||    
T  10123150 ccatgagcttaactcatttggtaagggataatt-acaatatgtgtaggggtcggggttcgaaccccaa------acaccccacttattcatctttaaggt 10123058  T
Q  164 gaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||| |||||    
T  10123057 gaatttctctagccactaggctacttgac 10123029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 78 - 185
Target Start/End: Complemental strand, 25031582 - 25031480
Alignment:
Q  78 tcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttctctagc 176  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||||||||  ||||      ||||| ||||||||||| |||||||||||||||||||||    
T  25031582 tcatttggtaagagataatgcataatatgtgcaggggccggggttcgaattccgg------acaccccacttattcatctttaaggtgaatttctctagc 25031489  T
Q  177 cactaggct 185  Q
    |||||||||    
T  25031488 cactaggct 25031480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 61 - 183
Target Start/End: Original strand, 8893853 - 8893970
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||| ||||||  |||||||||||||      |  ||||| ||||||||||| ||||    
T  8893853 gtccacatgagcttagttcatttggtaagggataatgcacaatatgtacaggggtcggggttcgaaccc------caaacaccccacttattcatcttta 8893946  T
Q  160 aggtgaatttctctagccactagg 183  Q
    ||||||||||||| | ||||||||    
T  8893947 aggtgaatttctccaaccactagg 8893970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 30735827 - 30735947
Alignment:
Q  67 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtga 165  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||| || ||| ||||||       ||||||| ||||||||||| |  |||||||    
T  30735827 atgagcttaactcatttggtaagggataatgcacaatttgtgcaggggccggagtttgaaccc------tggacaccacacttattcatctcaaaggtga 30735920  T
Q  166 atttctctagccactaggctatttgac 192  Q
    ||||||||| ||||||||||| |||||    
T  30735921 atttctctaaccactaggctacttgac 30735947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 192
Target Start/End: Original strand, 4126891 - 4127018
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttt 158  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||| |  ||| |||| |      |||||||| || |||||||| |||    
T  4126891 ggtccccatgagtttagctcatttggtaagggataatgcacaatatatgcagaggccgatgtttgaacac------cggacaccccatttattcatcttt 4126984  T
Q  159 aaggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||| |||||||||||| ||| |||||    
T  4126985 aaggtgaatttatctagccactagactacttgac 4127018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 19424050 - 19424165
Alignment:
Q  72 cttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaaggtgaatttc 170  Q
    ||||||||||||| |||||||||||||| | ||| ||||||||  |||||||||||||      |||||||| ||||||||||  |||||||||||||||    
T  19424050 cttagctcatttgataagggataatgcatattatatgcaggggtcggggttcgaaccc------cggacaccccacttattcacctttaaggtgaatttc 19424143  T
Q  171 tctagccactaggctatttgac 192  Q
    ||||||| |||||||| |||||    
T  19424144 tctagccgctaggctacttgac 19424165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 12973380 - 12973254
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| | | ||| ||| |      | |||||| ||||||||||| ||||    
T  12973380 gtccccatgagtttagctcatttggtaagggataatgcacaatatatgcaggggccgagattcaaactc------ctgacaccccacttattcatcttta 12973287  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    |||| ||||||| |||||||||| ||| |||||    
T  12973286 aggtaaatttctttagccactagactacttgac 12973254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 25421847 - 25421916
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||||||||||||| |||||||||||||||| |||||||||| |||| |||||||||||||| ||||||    
T  25421847 gtccccatgagcttaactcatttggtaagggacaatgcacaatttgtgtaggggctggggttcaaacccc 25421916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 50302941 - 50302837
Alignment:
Q  73 ttagctcatttggtaagggataatgcacaatatgtgcag-gggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttc 170  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||       | |||||   |||||||||| |||||||||||||||    
T  50302941 ttagctcatttggtaagggataatgcataatatgtgcagagggctggggttcgaacc-------ctgacactctacttattcatctttaaggtgaatttc 50302849  T
Q  171 tctagccactag 182  Q
    ||||||||||||    
T  50302848 tctagccactag 50302837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 15550874 - 15550926
Alignment:
Q  56 atagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtg 108  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15550874 atagggtccccatgagcttatctcatttggtaagggataatgcacaatatgtg 15550926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 39304305 - 39304253
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggg 113  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39304305 gtccccatgagcttagctcatttggtaagggataatgcataatatgtgcaggg 39304253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 3347805 - 3347686
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    |||||| |||||||| | |||||||||| |||||||| ||||||||| |||| |  |||||||||||||      || ||||| ||||||||||| ||||    
T  3347805 gtccccgtgagcttaacacatttggtaatggataatgtacaatatgttcaggagtcggggttcgaaccc------cgtacaccccacttattcatcttta 3347712  T
Q  160 aggtgaatttctctagccactaggct 185  Q
    |||||||||||||||| |||||||||    
T  3347711 aggtgaatttctctagtcactaggct 3347686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 64 - 192
Target Start/End: Complemental strand, 23368831 - 23368708
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaagg 162  Q
    ||||||||||||||||||||| |||||||||||||||| | ||||||||| | |  ||||||||||      |||||||| ||||||||||  || ||||    
T  23368831 cccatgagcttagctcatttgataagggataatgcacattttgtgcagggaccgatgttcgaaccc------cggacaccccacttattcacattaaagg 23368738  T
Q  163 tgaatttctctagccactaggctatttgac 192  Q
    ||||||| |||||||||||| ||| |||||    
T  23368737 tgaatttatctagccactagtctacttgac 23368708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 16986027 - 16985911
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaa 160  Q
    |||||||||| |||||||||||||||||||||||||         |||||||| || ||||||||||||||      |||||| |||||||||| |||||    
T  16986027 tccccatgagtttagctcatttggtaagggataatg---------tgcaggggttgaggttcgaaccccgg------acacctaacttattcatctttaa 16985943  T
Q  161 ggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||| || |||||    
T  16985942 ggtgaatttctctagccactaggttacttgac 16985911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 48813718 - 48813774
Alignment:
Q  52 aaatatagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtg 108  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||    
T  48813718 aaatatagggtccccatgagcttatttcatttggtaagggataatgcataatatgtg 48813774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 35527437 - 35527390
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtg 108  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  35527437 gtccccatgaacttagctcatttggtaagggataatgcacaatatgtg 35527390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 25585407 - 25585353
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggct 116  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  25585407 tccccatgagcttagttcatttggtaaaggatgatgcacaatatgtgcaggggct 25585353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 356 - 405
Target Start/End: Complemental strand, 46602202 - 46602153
Alignment:
Q  356 tattttgtcggataatttttcaccaataaattatatatatattcgtcgga 405  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  46602202 tattttgtcggataatttttcaccgataaattatatatatattagtcgga 46602153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 12148672 - 12148559
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 162  Q
    ||||||||||||||||||||  |||| ||||||| ||||||||||||||||  || |||| |||||      | |||||| ||||||||||| |||||||    
T  12148672 cccatgagcttagctcattttataagcgataatgtacaatatgtgcaggggtcggagttcaaaccc------cagacaccccacttattcatctttaagg 12148579  T
Q  163 tgaatttctctagccactag 182  Q
    ||||||||||| | ||||||    
T  12148578 tgaatttctctggacactag 12148559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 47683646 - 47683714
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    ||||| ||||| |||||| | |||||||||||||||||||||||||||||| ||| || ||||||||||    
T  47683646 gtccctatgagattagcttaattggtaagggataatgcacaatatgtgcagaggccggagttcgaaccc 47683714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 174
Target Start/End: Complemental strand, 52164470 - 52164365
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaagg 162  Q
    |||| ||||||| ||||||||||||| |||||||||||||||||||||||   ||||||||||  |      |||||||| |||||||| | ||||||||    
T  52164470 cccacgagcttaactcatttggtaagagataatgcacaatatgtgcagggatcggggttcgaattc------cggacaccccacttattaatttttaagg 52164377  T
Q  163 tgaatttctcta 174  Q
    ||||||||||||    
T  52164376 tgaatttctcta 52164365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 33616582 - 33616543
Alignment:
Q  203 tataggagattttataattttaattggattctagatttta 242  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33616582 tataggagattttataattttaattggattctagatttta 33616543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 192
Target Start/End: Complemental strand, 49239946 - 49239823
Alignment:
Q  57 tagggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat- 155  Q
    ||||||||  |||||||||||| ||||||||||||||||||  ||||||||| |||||       |||||||||||      ||||| |||||||||||     
T  49239946 tagggtccttatgagcttagcttatttggtaagggataatgagcaatatgtgtagggg-------tcgaaccccgg------acaccccacttattcatc 49239860  T
Q  156 tttaaggtgaatttctctagccactaggctatttgac 192  Q
    |||||||| ||||||||||||||||| |||| |||||    
T  49239859 tttaaggtaaatttctctagccactaagctacttgac 49239823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 4684279 - 4684164
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||| || |||||  ||||||||||      |  |||| ||| || |||||||| ||||    
T  4684279 gtccccacgagcttacctcatttggtaagggataatgtacaatatatgtaggggtcggggttcgaa------gttcggataccccatttattcatcttta 4684186  T
Q  160 aggtgaatttctctagccacta 181  Q
    ||||||||| ||||||||||||    
T  4684185 aggtgaattactctagccacta 4684164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 7166299 - 7166230
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||||||||||||||||||||    
T  7166299 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggctggggttcgaaccccgg 7166230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 15551224 - 15551266
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatat 397  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  15551224 ttattttgtcggataatttttcacctataaattatatatatat 15551266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 48814006 - 48814048
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatat 397  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  48814006 ttattttgtcggataatttttcaccgataaattatatatatat 48814048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 27160495 - 27160555
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacc 128  Q
    |||| ||||||||||| ||||||||||||||| ||||| ||||||||||  ||||||||||    
T  27160495 tgagtttagctcatttagtaagggataatgcataatatatgcaggggctaaggttcgaacc 27160555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 182
Target Start/End: Complemental strand, 42937312 - 42937215
Alignment:
Q  80 atttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttctctagcca 178  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||||        | ||||||| | |||||||| |||||||||||||||||| ||||    
T  42937312 atttggtaaggaataatgcacaatatgtgcaggggttggagttcgaac------ttcagacaccttatttattcatctttaaggtgaatttctctcgcca 42937219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 3269617 - 3269683
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||||||||||||||||||||    
T  3269617 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggctggggttcgaaccc 3269683  T

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Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 128
Target Start/End: Complemental strand, 24253745 - 24253678
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacc 128  Q
    |||||||||||||||||||| ||| |||||||||||||| ||| | ||||||||  ||| ||||||||    
T  24253745 gtccccatgagcttagctcacttgataagggataatgcataatttatgcaggggtcgggattcgaacc 24253678  T

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Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 192
Target Start/End: Original strand, 29332278 - 29332403
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttt 158  Q
    |||||||||||||||| |||| ||| |||||||||||| | |  |||  || |||| |||||| |||||||||      ||||| ||||||||||  |||    
T  29332278 ggtccccatgagcttaactcacttgataagggataatgtatataatg--catgggccggggtttgaaccccgg------acaccccacttattcaccttt 29332369  T
Q  159 aaggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||| |||||||| |||||    
T  29332370 aaggtgaatttctctagccgctaggctacttgac 29332403  T

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Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 33931185 - 33931256
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||| |||||| ||||||||| || |||||||||||||| ||| |||||| ||| || ||||||||||||||    
T  33931185 gtccgcatgagtttagctcatctgataagggataatgcataatttgtgcaagggttgtggttcgaaccccgg 33931256  T

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Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 35309718 - 35309753
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataat 96  Q
    ||||||||||||||||||||||||||||||||||||    
T  35309718 gtccccatgagcttagctcatttggtaagggataat 35309753  T

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Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 35527603 - 35527568
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataat 96  Q
    ||||||||||||||||||||||||||||||||||||    
T  35527603 gtccccatgagcttagctcatttggtaagggataat 35527568  T

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Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 192
Target Start/End: Complemental strand, 42946543 - 42946443
Alignment:
Q  87 aagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaaggtgaatttctctagccactaggct 185  Q
    ||||||||||||| | ||| |||||||||||||||| ||||||      |||||||| ||||||||||  || |||||||||||||||||||  ||||||    
T  42946543 aagggataatgcatattatatgcaggggctggggtttgaaccc------cggacaccccacttattcaccttaaaggtgaatttctctagccgttaggct 42946450  T
Q  186 atttgac 192  Q
    | |||||    
T  42946449 acttgac 42946443  T

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Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 50593422 - 50593383
Alignment:
Q  203 tataggagattttataattttaattggattctagatttta 242  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  50593422 tataggagattttataattttaattggattctaaatttta 50593383  T

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Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 19011359 - 19011420
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||||||||||| |||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  19011359 tgagcttagctcaattggta-gggatattgcatattatatgcaggggctggggttcgaacccc 19011420  T

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Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 21265654 - 21265723
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  21265654 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 21265723  T

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Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 22563384 - 22563453
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  22563384 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 22563453  T

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Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 25999848 - 25999917
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| |||||||||||||||||||    
T  25999848 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagctggggttcgaaccccgg 25999917  T

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Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 33207203 - 33207272
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  33207203 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 33207272  T

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Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 25800435 - 25800309
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||| |||| ||||| ||||| |||||||||||||||||||| | || |||| | ||||||| |||||      |||||||| ||||||||||| || |    
T  25800435 gtcccaatgaacttagttcattcggtaagggataatgcacaatttatgtagggtccggggttccaaccc------cggacaccccacttattcatcttaa 25800342  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    |||||||||||| || ||| || |||| |||||    
T  25800341 aggtgaatttctttaaccattaagctacttgac 25800309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 29491532 - 29491586
Alignment:
Q  136 cggacacctcacttattcattttaaggtgaatttctctagccactaggctatttgac 192  Q
    |||||||| |||||||||| ||||| ||||||||||  |||||||||||||||||||    
T  29491532 cggacaccccacttattcactttaaagtgaatttct--agccactaggctatttgac 29491586  T

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Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 2556562 - 2556621
Alignment:
Q  70 agcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||||||||| |||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  2556562 agcttagctcagttggta-gggatattgcatattatatgcaggggctggggttcgaacccc 2556621  T

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Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 17916702 - 17916766
Alignment:
Q  63 ccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaac 127  Q
    |||| ||||||||||||||||||||| |||||||| |  |||| ||||||||  |||||||||||    
T  17916702 ccccgtgagcttagctcatttggtaaaggataatgtattatatatgcaggggtcggggttcgaac 17916766  T

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Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 18467270 - 18467203
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||| ||||||| |||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  18467270 tccccgtgagcatagctcagttggta-gggatattgcatattatatgcaggggctggggttcgaacccc 18467203  T

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Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 178
Target Start/End: Original strand, 21947191 - 21947296
Alignment:
Q  67 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcattttaaggtgaa 166  Q
    |||| ||||||| |||||||||  ||||||| ||||| |||| ||||| || |||||||| | |||      | |||||| ||||||||||||| |||||    
T  21947191 atgaacttagcttatttggtaaaagataatgtacaatttgtgtaggggttgaggttcgaatctcgg------atacctcatttattcattttaaagtgaa 21947284  T
Q  167 tttctctagcca 178  Q
    ||||||||||||    
T  21947285 tttctctagcca 21947296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 48638530 - 48638597
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| ||||   ||| ||||||||||||||||||||||||    
T  48638530 tccccgtgagcttagctcagttggta-gggatattgcattttatatgcaggggctggggttcgaacccc 48638597  T

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Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 50593539 - 50593499
Alignment:
Q  142 cctcacttattcattttaaggtgaatttctctagccactag 182  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  50593539 cctcacttattcattttaaggtgaatttttttagccactag 50593499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 99
Target Start/End: Original strand, 40513237 - 40513268
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgca 99  Q
    ||||||||||||||||||||||||||||||||    
T  40513237 tgagcttagctcatttggtaagggataatgca 40513268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 1570264 - 1570195
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  1570264 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 1570195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 6438136 - 6438067
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  6438136 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 6438067  T

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Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 6463108 - 6463039
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||||||||| |||||| |||||| || |   ||| ||||||||| ||||||||||||||||    
T  6463108 tccccatgagcttagctcagttggta-gggatattgtattttatatgcaggggccggggttcgaaccccgg 6463039  T

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Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 11215005 - 11215066
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||||||||||| |||||| |||||| |||| | ||| ||||||||||| ||||||||||||    
T  11215005 tgagcttagctcagttggta-gggatattgcatattatatgcaggggctgaggttcgaacccc 11215066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 15550938 - 15550988
Alignment:
Q  143 ctcacttattcat-tttaaggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||| |||||||||||||||| ||||||||||| || |||||    
T  15550938 ctcacttattcatctttaaggtgaatttctgtagccactaggttacttgac 15550988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 15819673 - 15819604
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  15819673 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 15819604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 42490482 - 42490413
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||  ||||||||||||||||    
T  42490482 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggtcggggttcgaaccccgg 42490413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 46965738 - 46965807
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  46965738 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 46965807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 50899582 - 50899513
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  50899582 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 50899513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 16343027 - 16343095
Alignment:
Q  63 ccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  16343027 ccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 16343095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 36666647 - 36666579
Alignment:
Q  63 ccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||| ||||||||||||| |||||| |||| | |||| ||| | ||||||||| ||||||||||||||||    
T  36666647 ccccgtgagcttagctcagttggta-gggacattgcataatttatgcaggggccggggttcgaaccccgg 36666579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 2277758 - 2277821
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  2277758 tgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 2277821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 7191055 - 7191099
Alignment:
Q  88 agggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||| |||| | ||| ||||||||||||||||||||||||||    
T  7191055 agggatattgcatattatatgcaggggctggggttcgaaccccgg 7191099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 29936714 - 29936658
Alignment:
Q  136 cggacacctcacttattcattttaag-gtgaatttctctagccactaggctatttga 191  Q
    |||||||| ||||||||||| ||||  ||||||||||||||||| ||||||| ||||    
T  29936714 cggacaccccacttattcatcttaaaagtgaatttctctagccattaggctacttga 29936658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 31124712 - 31124641
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||||||||||| |||| || ||| | |||| ||| | ||||||||| ||||||||||| ||||    
T  31124712 ggtccccatgagcttagctcagttggcaa-ggacattgcataatttatgcaggggccggggttcgaactccgg 31124641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 40520828 - 40520895
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| |||| |||||||| |||||| |||||| |||| | ||| |||| |||||||||||||||||||    
T  40520828 tccccgtgagtttagctcagttggta-gggatattgcatattatatgcatgggctggggttcgaacccc 40520895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 40634224 - 40634272
Alignment:
Q  88 agggataatgcacaatatgtgcaggggctggggttcgaaccccgggcac 136  Q
    ||||||| |||| | ||| |||||||| |||||||||||||||||||||    
T  40634224 agggatattgcatattatatgcaggggatggggttcgaaccccgggcac 40634272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 45333783 - 45333717
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||| | |||||| |||| | ||| ||||||||||||||||||||||||    
T  45333783 tccccgtgagcttagctcagttggca-gggatattgcata-tatatgcaggggctggggttcgaacccc 45333717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 51050188 - 51050255
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| || | | ||| |||||||| |||||||||||||||    
T  51050188 tccccgtgagcttagctcagttggta-gggatattgtatattatatgcaggggatggggttcgaacccc 51050255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 59 - 192
Target Start/End: Original strand, 419703 - 419831
Alignment:
Q  59 gggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tt 157  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||      |||||||| ||||||||||| ||    
T  419703 gggtccccatgagcttagctcatttggtaagggataatgaacaatatgtgcaggggccggggttcgaaccc------cggacaccccacttattcatctt 419796  T
Q  158 taaggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||||||| |||||    
T  419797 taaggtgaatttctctagccactaggctacttgac 419831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 7e-41; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 36388598 - 36388733
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaaaat 253  Q
    ||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  36388598 attttaaggtgaatttctctaaccactaggctatttgacaaaaaaataatataggagattttataattttaattggattctatattttattttgaaaaat 36388697  T
Q  254 tactccaatatgaacaaattctagattttattttga 289  Q
    ||||| |||||||||||| |||||||||||||||||    
T  36388698 tactcgaatatgaacaaaatctagattttattttga 36388733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 48433812 - 48433686
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||      |||||||| ||||||||||| ||||    
T  48433812 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcaaaccc------cggacaccccacttattcatcttta 48433719  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||||| |||||    
T  48433718 aggtgaatttctctagccactaggctacttgac 48433686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 25965167 - 25965033
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaaaat 253  Q
    ||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  25965167 attttaaggtgaatttctctaaccactaggctatttgacaaaaaaaaa-tataggagattttataattttaattggattctatattttattttgaaaaat 25965069  T
Q  254 tactccaatatgaacaaattctagattttattttga 289  Q
    ||||| |||||||||||| |||||||||||||||||    
T  25965068 tactcgaatatgaacaaaatctagattttattttga 25965033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 40273814 - 40273925
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||      |||||||| ||||||||||| ||||    
T  40273814 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccc------cggacaccccacttattcatcttta 40273907  T
Q  160 aggtgaatttctctagcc 177  Q
    ||||||||||||||||||    
T  40273908 aggtgaatttctctagcc 40273925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 61 - 183
Target Start/End: Complemental strand, 23824693 - 23824577
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||       ||||||||  |||||||||| ||||    
T  23824693 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcatgggccgaggttcgaacc-------cggacaccctacttattcatcttta 23824601  T
Q  160 aggtgaatttctctagccactagg 183  Q
    ||||||||||||||||||||||||    
T  23824600 aggtgaatttctctagccactagg 23824577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 31793461 - 31793587
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||      |||||||| ||||||||||| ||||    
T  31793461 gtccacatgagcttagctcatttgttaagggataatgcacaatatgtgcaggggtcggggttcgaaccc------cggacaccccacttattcatcttta 31793554  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||| |||||||||||||||||| || |||||    
T  31793555 aggtggatttctctagccactaggttacttgac 31793587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 65 - 181
Target Start/End: Original strand, 12166079 - 12166190
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggt 163  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||      | |||||| ||||||||||| ||||||||    
T  12166079 ccatgaacttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccc------cagacaccccacttattcatctttaaggt 12166172  T
Q  164 gaatttctctagccacta 181  Q
    ||||||||||||| ||||    
T  12166173 gaatttctctagctacta 12166190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 65 - 189
Target Start/End: Original strand, 42554631 - 42554750
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      |||| |||  |||||||||| |||| |||    
T  42554631 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccc------cggatacccgacttattcatctttatggt 42554724  T
Q  164 gaatttctctagccactaggctattt 189  Q
    ||||||| ||||||||||| ||||||    
T  42554725 gaatttccctagccactagactattt 42554750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 38378212 - 38378338
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-tttta 159  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||| |||||| ||||||      |||||||| |||||||||| |||||    
T  38378212 gtccccatgagtttagtttatttggtaagggataatgcacaatatgtgcaggggccggggtttgaaccc------cggacaccccacttattcattttta 38378305  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||| |||||| |||| |||||    
T  38378306 aggtgaatttctctacccactaagctacttgac 38378338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 27454007 - 27454131
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcatttt--aag 161  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||  | |||||||||      | |||||||| ||||||||||| ||  |||    
T  27454007 cccatgagcttagctcatttggtaagggataatgcacaatttgtgcaggggtcgaggttcgaac------ctcggacaccccacttattcatcttaaaag 27454100  T
Q  162 gtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||| |||||    
T  27454101 gtgaatttctctagccactaggctacttgac 27454131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 4956174 - 4956068
Alignment:
Q  81 tttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttctctagccac 179  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| ||      ||||| ||||||||||| ||||||||||||||||||||||||    
T  4956174 tttggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccctgg------acaccccacttattcatctttaaggtgaatttctctagccac 4956081  T
Q  180 taggctatttgac 192  Q
    ||||||| |||||    
T  4956080 taggctacttgac 4956068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 36388862 - 36388930
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36388862 ttatttcgtcggataatttttcaccgataaattatatatatattcgtcggagatcctaaattatccaat 36388930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 24029978 - 24030089
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||      | |||||| || |||||||| ||||    
T  24029978 gtccccatgagtttagctcatttgataagggataatgcacaatatgtgtaggggccggggttcgaaccc------cagacaccccatttattcatcttta 24030071  T
Q  160 aggtgaatttctctagcc 177  Q
    ||||||||||||||||||    
T  24030072 aggtgaatttctctagcc 24030089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 3961510 - 3961384
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcatttt-a 159  Q
    ||||||| ||| ||| |||||||||||| |||||||||||||| ||||||| ||| |||||||||||||      |||||| | |||||||||||||| |    
T  3961510 gtccccacgagtttaactcatttggtaaaggataatgcacaatttgtgcagaggccggggttcgaaccc------cggacatcccacttattcattttaa 3961417  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||| ||||||||| |||||    
T  3961416 aggtgaatttctctagctactaggctacttgac 3961384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 33248905 - 33248778
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttt 158  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||  |||||||||||||      ||||||||  |||||||||| |||    
T  33248905 ggtccccatgagcttagctcatttggtaagggatgatgcacaatatatgcagaggtcggggttcgaaccc------cggacaccctacttattcatcttt 33248812  T
Q  159 aaggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||| | | |||||| ||| |||||    
T  33248811 aaggtgaatttctttcgtcactagactacttgac 33248778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 42338348 - 42338278
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||| |||||    
T  42338348 tccccatgagcttagctcatttggtaaggaataatgcacaatatgtgcaggggacggggttcgaatcccgg 42338278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 1575687 - 1575756
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| |||||| |||||||||||||||    
T  1575687 gtccccatgagcttaactcatttggtaagggataatacacaatatgtacaggggttggggttcgaacccc 1575756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 363 - 423
Target Start/End: Complemental strand, 25964898 - 25964838
Alignment:
Q  363 tcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  25964898 tcggataatttttcatcgataaattatatatatattcgtcggagatcctaaattatccaat 25964838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 3902376 - 3902306
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccg 131  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||    
T  3902376 ggtccccacgagcttagctcatttggtaagggataatgcaaaatatgtgca-gggccggggttcgaaccccg 3902306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 26456109 - 26456038
Alignment:
Q  59 gggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||  ||| |||||||    
T  26456109 gggtccccatgagcttagctcatttggtaagggacaatgcacaatatgtgcagggactgacgtttgaacccc 26456038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 62 - 189
Target Start/End: Original strand, 43440683 - 43440805
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaa 160  Q
    ||||| ||| ||||| | |||||||||||||||||||||||||||||||| ||  ||||||||||  |      | |||||| ||||||||||| |||||    
T  43440683 tccccgtgaacttagtttatttggtaagggataatgcacaatatgtgcagaggtcggggttcgaattc------cagacaccccacttattcatctttaa 43440776  T
Q  161 ggtgaatttctctagccactaggctattt 189  Q
    |||||||||||||||||||||| ||||||    
T  43440777 ggtgaatttctctagccactagactattt 43440805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 14707286 - 14707356
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||||||||||||||||||||||||||||||||||||||   ||| |||||||| |||||||||||||||||    
T  14707286 gtccccatgagcttagctcatttggtaagggataatgca-tttatatgcaggggttggggttcgaaccccgg 14707356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 36528321 - 36528250
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||  |||||  || |||||||||||||    
T  36528321 gtccccatgagcttaactcatttggtaagggataatgcacaatatgtataggggtcggagttcgaaccccgg 36528250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 46266661 - 46266728
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacc 128  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||  ||||||||||||    
T  46266661 gtccccatgagcttaactcatttggtaagggataatgcacaatttgtgcgggggacggggttcgaacc 46266728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 28914968 - 28914853
Alignment:
Q  73 ttagctcatttggtaagggataatgcacaatatgtgcagggg-ctggggttcgaaccccgggcacggacacctcacttattcattttaa-ggtgaatttc 170  Q
    ||||||||  ||||||||||||||||| | ||| |||||||| | ||||||||||||||||      ||||| |||||||||| ||||| ||||||||||    
T  28914968 ttagctcacatggtaagggataatgcatattatatgcagggggccggggttcgaaccccgg------acaccccacttattcactttaaaggtgaatttc 28914875  T
Q  171 tctagccactaggctatttgac 192  Q
    |||||||||||||||| |||||    
T  28914874 tctagccactaggctacttgac 28914853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 34322126 - 34322065
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggtt 122  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  34322126 gtccccataagcatagctcatttgataagggataatgcacaatatgtgcagggactggggtt 34322065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 61 - 130
Target Start/End: Original strand, 44986587 - 44986656
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    |||| ||||||||||||||||||||||||||||||||||||||  |||||| ||| ||| ||||||||||    
T  44986587 gtcctcatgagcttagctcatttggtaagggataatgcacaattagtgcagtggccgggattcgaacccc 44986656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 191
Target Start/End: Original strand, 15025149 - 15025274
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-tttta 159  Q
    ||||||||||||||| ||||||||||||||||||||||| | | | | ||||||| ||||||| |||||      || ||||| ||||||||||  ||||    
T  15025149 gtccccatgagcttaactcatttggtaagggataatgcatattttatacaggggccggggttcaaaccc------cgaacaccccacttattcaccttta 15025242  T
Q  160 aggtgaatttctctagccactaggctatttga 191  Q
    ||||||||||||||| || |||||||| ||||    
T  15025243 aggtgaatttctctacccgctaggctacttga 15025274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 8249698 - 8249764
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaac 127  Q
    |||||||||||||||||||| ||||||| |||||||||| ||||| ||||||||  |||||||||||    
T  8249698 gtccccatgagcttagctcacttggtaaaggataatgcataatatatgcaggggtcggggttcgaac 8249764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 23602274 - 23602393
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaa 166  Q
    ||||||||||||||||| ||||| |||||||| | ||| ||||| | | || |||||||||||||      ||||||||||||||||  |||||||||||    
T  23602274 tgagcttagctcatttgataaggaataatgcatattatatgcagtgaccggagttcgaaccccgg------acacctcacttattcacctttaaggtgaa 23602367  T
Q  167 tttctctagccactaggctatttgac 192  Q
    ||||| |||||||||| ||| |||||    
T  23602368 tttctttagccactagactacttgac 23602393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 24315448 - 24315386
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    |||||||||||||||| |||| ||||||||||||||||||| |||||  ||||||||||||||    
T  24315448 tgagcttagctcatttagtaatggataatgcacaatatgtgtaggggtcggggttcgaacccc 24315386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 3889898 - 3889776
Alignment:
Q  66 catgagcttagctcatttggtaagggataatgcacaatatgtgca-ggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggt 163  Q
    |||||||||||||||||||  ||||||||||| ||||||| |||| |||||  ||||||||||||      |||||||| ||||||||||| || |||||    
T  3889898 catgagcttagctcatttgacaagggataatgtacaatatatgcagggggccagggttcgaaccc------cggacaccccacttattcatcttaaaggt 3889805  T
Q  164 gaatttctctagccactaggctatttgac 192  Q
    ||||||||||| ||| |||| || |||||    
T  3889804 gaatttctctaaccattaggttacttgac 3889776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 37918673 - 37918788
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||| |||| |||| |||||||| ||||||||||||||||| ||||| ||| |  |||||||||| |||     |||||||||||||||||||| |||     
T  37918673 gtccctatgaacttaactcatttgataagggataatgcacaa-atgtgtaggcgtcggggttcgaatccc-----cggacacctcacttattcatctttt 37918766  T
Q  160 aggtgaatttctctagccacta 181  Q
    ||||||||||||||| ||||||    
T  37918767 aggtgaatttctctaaccacta 37918788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 32986407 - 32986463
Alignment:
Q  136 cggacacctcacttattcattttaaggtgaatttctctagccactaggctatttgac 192  Q
    ||||||| |||||||||||  || |||||||||||||||||||||||||||||||||    
T  32986407 cggacacttcacttattcacatttaggtgaatttctctagccactaggctatttgac 32986463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 48619793 - 48619909
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 162  Q
    |||||||| ||| |||||||||||| |||||||| |||||||||||||||| | ||||||||||        | |||||  ||||||||||| |||||||    
T  48619793 cccatgagtttaactcatttggtaaaggataatgtacaatatgtgcagggg-ttgggttcgaac------ttcagacactccacttattcatctttaagg 48619885  T
Q  163 tgaatttctctagccactaggcta 186  Q
    ||||||||||||||||||| ||||    
T  48619886 tgaatttctctagccactaagcta 48619909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 46570073 - 46570002
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||||| ||||||||||||| ||| |||||||||||||| | | | ||||||||| ||||||||||||||||    
T  46570073 gtccccgtgagcttagctcacttgataagggataatgcatagtttatgcaggggccggggttcgaaccccgg 46570002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 5228064 - 5228189
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    |||||||||||||||||||| ||| ||| ||||||||||   | | ||||||||| |||||||||| || ||      ||||| ||||||||||  ||||    
T  5228064 gtccccatgagcttagctcacttgataaaggataatgcatttt-tatgcaggggccggggttcgaatcctgg------acaccccacttattcaccttta 5228156  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    |||||||||||||||||| |||||||| |||||    
T  5228157 aggtgaatttctctagccgctaggctacttgac 5228189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 192
Target Start/End: Complemental strand, 9668909 - 9668792
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcattttaaggtgaat 167  Q
    ||||||||||||| ||||||||||||||||||  || | ||||||| || ||||||||||||      |  |||||||| |||||||  |||||||||||    
T  9668909 tgagcttagctcacttggtaagggataatgca-tatttatgcagggactagggttcgaaccc------caaacacctcatttattcaccttaaggtgaat 9668817  T
Q  168 ttctctagccactaggctatttgac 192  Q
    |||||| ||| |||||||| |||||    
T  9668816 ttctctggccgctaggctacttgac 9668792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 25833553 - 25833620
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  25833553 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggctggggttcgaacccc 25833620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 28712361 - 28712413
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggg 113  Q
    |||| |||||||||| ||||||||||||||||||||| | |||||||||||||    
T  28712361 gtcctcatgagcttaactcatttggtaagggataatgtataatatgtgcaggg 28712413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 182
Target Start/End: Original strand, 37665736 - 37665853
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattc-atttt 158  Q
    ||||||| |||||||| |||||||||||| ||||||  || | ||| ||||||||| ||||||| |||||      |||||||| |||||||||   |||    
T  37665736 ggtccccgtgagcttaactcatttggtaaaggataaaacatattatatgcaggggccggggttcaaaccc------cggacaccccacttattcgccttt 37665829  T
Q  159 aaggtgaatttctctagccactag 182  Q
    ||||||||||||| ||||||||||    
T  37665830 aaggtgaatttctttagccactag 37665853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 44662558 - 44662494
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| | ||||||||||||||||  || | ||||||||| ||||||||||||||||    
T  44662558 tgagcttagctcactaggtaagggataatgcattatgtatgcaggggccggggttcgaaccccgg 44662494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 9877339 - 9877270
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  9877339 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 9877270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 15238887 - 15238956
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  15238887 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 15238956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 23102630 - 23102561
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  23102630 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 23102561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 25965742 - 25965808
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    |||||||||||||||||  ||||||||||||||||| ||| | |||||||  ||||||| |||||||    
T  25965742 cccatgagcttagctcacctggtaagggataatgcataatttatgcagggtttggggtttgaacccc 25965808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 1576388 - 1576425
Alignment:
Q  155 ttttaaggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  1576388 ttttaaggtgaatttctctagccaccaggctatttgac 1576425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 33413902 - 33413951
Alignment:
Q  144 tcacttattcattttaa-ggtgaatttctctagccactaggctatttgac 192  Q
    |||||||||||| |||| |||||||||||||||||| |||||||||||||    
T  33413902 tcacttattcatcttaaaggtgaatttctctagccattaggctatttgac 33413951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 48525586 - 48525696
Alignment:
Q  77 ctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaaggtgaatttctctag 175  Q
    |||| ||||||||||| |||||| | ||| |||||||| ||||||||||||||      |||||||||||||||||||  |||||| |  ||||||||||    
T  48525586 ctcacttggtaagggacaatgcatattatatgcaggggttggggttcgaaccc------cggacacctcacttattcacctttaagttagatttctctag 48525679  T
Q  176 ccactaggctatttgac 192  Q
    ||| |||| || |||||    
T  48525680 ccattaggatacttgac 48525696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 10091469 - 10091433
Alignment:
Q  156 tttaaggtgaatttctctagccactaggctatttgac 192  Q
    |||||||||||||||||||||||||| ||||||||||    
T  10091469 tttaaggtgaatttctctagccactacgctatttgac 10091433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 10900070 - 10900110
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaata 104  Q
    ||||||||||||||||||||||||||| |||||||| ||||    
T  10900070 cccatgagcttagctcatttggtaaggaataatgcataata 10900110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 34238814 - 34238850
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttg 190  Q
    ||||||||||||||||||||| |||||||||||||||    
T  34238814 attttaaggtgaatttctctaaccactaggctatttg 34238850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 47440884 - 47440816
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    |||||||||||||||||||| |||||| ||   |||||| ||||| ||||||||  |||||||||||||    
T  47440884 gtccccatgagcttagctcagttggtagggacaaatgcataatatatgcaggggtcggggttcgaaccc 47440816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 47641043 - 47641110
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| || |||||||||||||||||||||    
T  47641043 tccccgtgagcttagctcagttggta-gggatattgcatattatatgtaggggctggggttcgaacccc 47641110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 19753040 - 19752974
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| |||||||||||||    
T  19753040 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccc 19752974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 99
Target Start/End: Complemental strand, 38110277 - 38110246
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgca 99  Q
    ||||||||||||||||||||||||||||||||    
T  38110277 tgagcttagctcatttggtaagggataatgca 38110246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 41468835 - 41468878
Alignment:
Q  67 atgagcttagctcatttggtaagggataatgcacaatatgtgca 110  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||    
T  41468835 atgagcttagttcatttggtaaggggtaatgcacaatttgtgca 41468878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 99
Target Start/End: Original strand, 46243291 - 46243322
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgca 99  Q
    ||||||||||||||||||||||||||||||||    
T  46243291 tgagcttagctcatttggtaagggataatgca 46243322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 10624827 - 10624789
Alignment:
Q  139 acacctcacttattcattttaaggtgaatttctctagcc 177  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  10624827 acaccgcacttattcactttaaggtgaatttctctagcc 10624789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 21388521 - 21388590
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||| ||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  21388521 tccccatgagcgtagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 21388590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 27424837 - 27424902
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacc 128  Q
    ||||| ||||||||||||| |||| |||||||| |||| | ||| ||||||||| ||||||||||||    
T  27424837 tccccgtgagcttagctcagttgg-aagggatattgcatattatatgcaggggccggggttcgaacc 27424902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 29617403 - 29617472
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  29617403 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 29617472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 30388573 - 30388512
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||    
T  30388573 tgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaacccc 30388512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 7608794 - 7608758
Alignment:
Q  92 ataatgcacaatatgtgcaggggctggggttcgaacc 128  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  7608794 ataatgcacaatatatgcaggggccggggttcgaacc 7608758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 12640661 - 12640594
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||    
T  12640661 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaacccc 12640594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 24781034 - 24781097
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  24781034 tgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 24781097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 32677008 - 32676945
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  32677008 tgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 32676945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 34267617 - 34267554
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||||| || ||| |||| | ||| |||||| |||||||||||||||||||    
T  34267617 tgagcttagctcagttggta-ggaatattgcatattatatgcaggagctggggttcgaaccccgg 34267554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 36174394 - 36174457
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  36174394 tgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 36174457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 46987087 - 46987150
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| ||||||| ||| |||||| ||||| |||| || | ||||||||||||||||    
T  46987087 tgagcttagctcagttggtaa-ggacaatgcataatatatgcaaggtccggggttcgaaccccgg 46987150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 4e-33; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 32342738 - 32342604
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaaaaat 253  Q
    |||||||||| |||||||||| | |||||||||||||||          ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  32342738 attttaaggtaaatttctctaactactaggctatttgacaaaaaaaaa-tataggagattttataattttaattggattctatattttattttgaaaaat 32342640  T
Q  254 tactccaatatgaacaaattctagattttattttga 289  Q
    ||||| |||||||||||| |||||||||||||||||    
T  32342639 tactcgaatatgaacaaaatctagattttattttga 32342604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 34107488 - 34107613
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||   |||||| ||||       |||||||| ||||||||||| ||||    
T  34107488 gtccctatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcagggttcaaacc-------cggacaccccacttattcatcttta 34107580  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||||| |||||    
T  34107581 aggtgaatttctctagccactaggctacttgac 34107613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 18424249 - 18424134
Alignment:
Q  63 ccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaag 161  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||| |      |||||| | ||||||||||| ||||||    
T  18424249 ccccatgagcttagctcatttggtaagg---aatgcacaatatgtgcaggggccggggttcgaactc------cggacatcccacttattcatctttaag 18424159  T
Q  162 gtgaatttctctagccactaggcta 186  Q
    |||||||||||||||||||||||||    
T  18424158 gtgaatttctctagccactaggcta 18424134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 192
Target Start/End: Complemental strand, 3330303 - 3330177
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||| ||||| ||||||| ||||||||||||||||||||||||||| ||  || ||||||||||      |||||||| ||||||||||| ||||    
T  3330303 gtccccatgtgcttaactcatttagtaagggataatgcacaatatgtgcagaggtcggagttcgaaccc------cggacaccccacttattcatcttta 3330210  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||| |||||| ||||||||||    
T  3330209 aggtgaatttctctaaccactaagctatttgac 3330177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 41749940 - 41750065
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| |||| |||||  |||||| ||||||      |||||||| ||||||||||| ||||    
T  41749940 gtccccatgagctaagctcatttggcaagggataatgcacaatgtgtgtaggggtcggggtttgaaccc------cggacacc-cacttattcatcttta 41750032  T
Q  160 aggtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||||||||| |||||    
T  41750033 aggtgaatttctctagccactaggctacttgac 41750065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 203 - 289
Target Start/End: Original strand, 30777833 - 30777923
Alignment:
Q  203 tataggagattttataattttaattggattctagattttactttgaaaaattactcc----aatatgaacaaattctagattttattttga 289  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||  |||    |||||||||||| |||||||||||||||||    
T  30777833 tataggagattttataattttaattggattctagattttattttgaaaaatttgtccgacgaatatgaacaaactctagattttattttga 30777923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 32342466 - 32342398
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  32342466 ttatttcgtcggataatttttcaccgataaattatatatatattcatcggagatcctaaattatccaat 32342398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 43027149 - 43027274
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-ttttaa 160  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||| || |||| |||||||||||      | |||||| || |||||||  |||||    
T  43027149 tccccatgagcttagctcatttgataagggataatgcacaatttgtgcgggtgctgaggttcgaaccc------cagacaccccatttattcacctttaa 43027242  T
Q  161 ggtgaatttctctagccactaggctatttgac 192  Q
    |||||||||||||||||||||| ||| |||||    
T  43027243 ggtgaatttctctagccactagactacttgac 43027274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 33065353 - 33065233
Alignment:
Q  67 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtga 165  Q
    ||||||||||||||||||| ||||||||||||||||| |||| |||||  ||||||||||| |      || |||||  |||||||||| ||||||||||    
T  33065353 atgagcttagctcatttggcaagggataatgcacaatgtgtgtaggggtcggggttcgaactc------cgaacaccctacttattcatctttaaggtga 33065260  T
Q  166 atttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||||| |||||    
T  33065259 atttctctagccactaggctacttgac 33065233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 154 - 249
Target Start/End: Complemental strand, 4632083 - 4631988
Alignment:
Q  154 attttaaggtgaatttctctagccactaggctatttgacnnnnnnnnnntataggagattttataattttaattggattctagattttactttgaa 249  Q
    |||||||||||||||||||||||||||||||||||||||          ||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  4632083 attttaaggtgaatttctctagccactaggctatttgacaaaaaaaaaatatagcagattttataattttaattggattctatattttattttgaa 4631988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 355 - 423
Target Start/End: Complemental strand, 4631885 - 4631817
Alignment:
Q  355 ttattttgtcggataatttttcaccaataaattatatatatattcgtcggagatcctaaattatccaat 423  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  4631885 ttatttcgtcagataatttttctccaataaattatatatatattcgtcggatatcctaaattatccaat 4631817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 11069447 - 11069379
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  11069447 gtccgcatgagcttagctcatttggtaaggaataatgcacaatatgtgcagggtttggggttcgaaccc 11069379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 31149202 - 31149078
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaa 160  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| || |||||||||||      | |||||| ||||| || || |||||    
T  31149202 tccccatgagcatagctcatttggtaagggataatgcacaatatgtgca-gggttgaggttcgaaccc------cagacaccccactttttaatctttaa 31149110  T
Q  161 ggtgaatttctctagccactaggctatttgac 192  Q
    |||||||||||||| ||||| ||||| |||||    
T  31149109 ggtgaatttctctaaccacttggctacttgac 31149078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 186
Target Start/End: Complemental strand, 19843465 - 19843345
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-ttta 159  Q
    |||| |||||||||| ||||||| ||||||||| ||| ||||||||||||||||   ||||||||||||  |      ||||||||||||||||| ||||    
T  19843465 gtcctcatgagcttaactcatttcgtaagggatgatgtacaatatgtgcaggggtcagggttcgaaccctag------acacctcacttattcatcttta 19843372  T
Q  160 aggtgaatttctctagccactaggcta 186  Q
    ||||||||||||||||| |||||||||    
T  19843371 aggtgaatttctctagctactaggcta 19843345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 16403522 - 16403572
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16403522 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggc 16403572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 17543173 - 17543066
Alignment:
Q  80 atttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttctctagcca 178  Q
    |||||||||||||||||||||||||||||||||||| || |||||||| |      |||||||| ||||||||||| ||||| |||| |||||||| |||    
T  17543173 atttggtaagggataatgcacaatatgtgcaggggccggagttcgaacgc------cggacaccccacttattcatctttaatgtgactttctctaacca 17543080  T
Q  179 ctaggctatttgac 192  Q
    |||||||| |||||    
T  17543079 ctaggctacttgac 17543066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 192
Target Start/End: Complemental strand, 18949783 - 18949661
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcattttaaggt 163  Q
    |||||||||||| |||||||| ||| ||||||||||  |||||||||||||  |||||||||||||       | |||||  ||||||||||||||| ||    
T  18949783 cccatgagcttaactcatttgataacggataatgcattatatgtgcaggggtcggggttcgaaccc------tgaacacccaacttattcattttaatgt 18949690  T
Q  164 gaatttctctagccactaggctatttgac 192  Q
    ||||||||||||||||||| ||| |||||    
T  18949689 gaatttctctagccactagactacttgac 18949661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 70 - 192
Target Start/End: Original strand, 6866510 - 6866627
Alignment:
Q  70 agcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatt 168  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | || ||||||| ||      ||||||||||||||||| || |||||||||||||    
T  6866510 agcttaactcatttggtaagggataatgcacaatatgtgcaggaaccggagttcgaatcc------cggacacctcacttatttatctttaaggtgaatt 6866603  T
Q  169 tctctagccactaggctatttgac 192  Q
    ||| |||||| ||| ||| |||||    
T  6866604 tctttagccagtagactacttgac 6866627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 25553247 - 25553181
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaac 127  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  25553247 gtccccatgagcttaattcatttggtaagggataatgcacaatatgtgcagagattggggttcgaac 25553181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 27463624 - 27463560
Alignment:
Q  65 ccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||| || ||| |||||||||    
T  27463624 ccatgagcttagctcatttggtaaggaataatgcacaatatatgcaggagccgggattcgaaccc 27463560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 289
Target Start/End: Complemental strand, 30778196 - 30778107
Alignment:
Q  204 ataggagattttataattttaattggattctagattttactttgaaaaattactcc----aatatgaacaaattctagattttattttga 289  Q
    ||||||| ||||||||||||||||||||||||||||||| ||| |||||||  |||    |||||||||||  |||||||||||||||||    
T  30778196 ataggagtttttataattttaattggattctagattttattttcaaaaatttgtccgacgaatatgaacaagctctagattttattttga 30778107  T

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Target: chr2; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 24202143 - 24202214
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||||| ||||||||||||| ||||||||||||||||||  || | ||||||||| ||||||||||||||||    
T  24202143 gtccccgtgagcttagctcacttggtaagggataatgcattatgtatgcaggggccggggttcgaaccccgg 24202214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 63 - 192
Target Start/End: Original strand, 29090411 - 29090534
Alignment:
Q  63 ccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaag 161  Q
    |||| |||||||||||||| || ||||||||||||||   ||| | ||||||| || |||||||||||||      ||||||||||||||||| ||||||    
T  29090411 ccccttgagcttagctcatatgataagggataatgcatt-tatatacaggggccggagttcgaaccccgg------acacctcacttattcatctttaag 29090503  T
Q  162 gtgaatttctctagccactaggctatttgac 192  Q
    ||||||||||| |||| |||||||| |||||    
T  29090504 gtgaatttctccagccgctaggctacttgac 29090534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 32084841 - 32084908
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccg 131  Q
    ||||||||||||||||||||||||||||| |||||| | ||| || |||||| |||||||||||||||    
T  32084841 cccatgagcttagctcatttggtaagggacaatgcatattatatgtaggggccggggttcgaaccccg 32084908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 191
Target Start/End: Complemental strand, 5901915 - 5901808
Alignment:
Q  79 catttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcattttaa-ggtgaatttctctagcc 177  Q
    |||| |||||||||||||||||||| | ||||||||| ||||| | ||||||||      ||||| ||||||||||| |||| ||||||||||| |||||    
T  5901915 cattaggtaagggataatgcacaatttctgcaggggccggggtacaaaccccgg------acaccccacttattcatcttaaaggtgaatttctttagcc 5901822  T
Q  178 actaggctatttga 191  Q
    ||||||||| ||||    
T  5901821 actaggctacttga 5901808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 43684272 - 43684341
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccg 131  Q
    |||||||||||||||||||||||||||||||||||||||   | | ||||||||||| |||||||||||||    
T  43684272 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatgcaggggctgaggttcgaaccccg 43684341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 42678423 - 42678310
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaagg 162  Q
    |||||||| ||| || | ||||||||||||||||||||||||| | ||||   || |||||||||||||      ||||| ||||||||||| |||||||    
T  42678423 cccatgagtttaacttacttggtaagggataatgcacaatatgcgtagggatcggagttcgaaccccgg------acaccccacttattcatctttaagg 42678330  T
Q  163 tgaatttctctagccactag 182  Q
    |||||||||||| |||||||    
T  42678329 tgaatttctctaaccactag 42678310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 3402610 - 3402571
Alignment:
Q  203 tataggagattttataattttaattggattctagatttta 242  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3402610 tataggagattttataattttaattggattctagatttta 3402571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 3402782 - 3402821
Alignment:
Q  203 tataggagattttataattttaattggattctagatttta 242  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3402782 tataggagattttataattttaattggattctagatttta 3402821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 41541618 - 41541579
Alignment:
Q  60 ggtccccatgagcttagctcatttggtaagggataatgca 99  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41541618 ggtccccatgagcttagctcatttggtaagggataatgca 41541579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 33482743 - 33482677
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacc 128  Q
    ||||||||| ||||||||||||||||||| || ||||||||||| ||||||| | | ||||||||||    
T  33482743 tccccatgaacttagctcatttggtaaggaatgatgcacaatatatgcagggaccgtggttcgaacc 33482677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 466771 - 466827
Alignment:
Q  74 tagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||||||||| ||||||||||| || | | ||||||||||||||||||||||||||    
T  466771 tagctcatttgataagggataatacatattttgtgcaggggctggggttcgaacccc 466827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 25783308 - 25783196
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaa 166  Q
    ||||||||||||| ||||| ||||||||||||  |||| |||||||| | ||||||||||||       ||||||| ||||||||||| || ||||||||    
T  25783308 tgagcttagctcacttggtgagggataatgca-tatatatgcaggggttagggttcgaaccc------tggacaccccacttattcatcttcaaggtgaa 25783216  T
Q  167 tttctctagccactaggcta 186  Q
     ||||||||||| |||||||    
T  25783215 gttctctagccattaggcta 25783196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 191
Target Start/End: Complemental strand, 40203381 - 40203256
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattca-tttta 159  Q
    |||| ||||||||||||||||| |||||||||||||| |||||||||| | |||   ||||| ||||||      | || ||| |||||||||| |||||    
T  40203381 gtcctcatgagcttagctcattcggtaagggataatgtacaatatgtgtaagggtcagggtttgaaccc------cagataccccacttattcattttta 40203288  T
Q  160 aggtgaatttctctagccactaggctatttga 191  Q
    ||||  ||||||||||||||||| ||| ||||    
T  40203287 aggtagatttctctagccactagactacttga 40203256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 19281606 - 19281675
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| |||||||||||||||||||    
T  19281606 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagctggggttcgaaccccgg 19281675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 28194630 - 28194699
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||||||||| ||| || |||||| |||| | ||| |||||||||||| |||||||||||||    
T  28194630 tccccatgagcttagctcagttgcta-gggatattgcatattatatgcaggggctggagttcgaaccccgg 28194699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 33229005 - 33228936
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  33229005 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 33228936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 34235852 - 34235902
Alignment:
Q  142 cctcacttattcattttaaggtgaatttctctagccactaggctatttgac 192  Q
    |||||||||||||||||||| ||||||||||||| |||||  |||||||||    
T  34235852 cctcacttattcattttaagatgaatttctctagtcactaaactatttgac 34235902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 19684071 - 19684139
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccg 131  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| ||||||||||||||||||    
T  19684071 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagctggggttcgaaccccg 19684139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 34613978 - 34614046
Alignment:
Q  63 ccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  34613978 ccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 34614046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 38790182 - 38790145
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgca 99  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  38790182 tccccgtgagcttagctcatttggtaagggataatgca 38790145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 42541165 - 42541274
Alignment:
Q  77 ctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacggacacctcacttattcat-tttaaggtgaatttctctag 175  Q
    |||| |||||||||||||||| | | | | |||||||||||||||||||||||| |      ||||| |||||| |||  ||||||||||||||||||||    
T  42541165 ctcacttggtaagggataatggatatt-tatgcaggggctggggttcgaaccccag------acaccccacttactcacctttaaggtgaatttctctag 42541257  T
Q  176 ccactaggctatttgac 192  Q
    || |||||||| |||||    
T  42541258 ccgctaggctacttgac 42541274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 3287122 - 3287059
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||| |||||||| |||| | ||| ||||||||| ||||||||||||||||    
T  3287122 tgagcttagctcagttgg-aagggatattgcatattatatgcaggggccggggttcgaaccccgg 3287059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 181
Target Start/End: Original strand, 6270495 - 6270539
Alignment:
Q  138 gacacctcacttattcat-tttaaggtgaatttctctagccacta 181  Q
    ||||||||||||||| || ||||||||||||||||||||||||||    
T  6270495 gacacctcacttatttatctttaaggtgaatttctctagccacta 6270539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 8250373 - 8250306
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||    
T  8250373 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaacccc 8250306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 41541571 - 41541516
Alignment:
Q  138 gacacctcacttattca-ttttaaggtgaatttctctagccactaggctatttgac 192  Q
    |||||| |||||||||| ||||||||||||||||||| ||| |||||||| |||||    
T  41541571 gacaccccacttattcacttttaaggtgaatttctctggccgctaggctacttgac 41541516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 11050829 - 11050760
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| | || | ||| ||||||||||||||||||||| ||||    
T  11050829 tccccgtgagcttagctcagttggta-gggatattacatattatatgcaggggctggggttcgaactccgg 11050760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 23405191 - 23405260
Alignment:
Q  59 gggtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    |||||||| ||||||||||||| ||||| ||||| | |||| ||||| ||||||||  |||||||||||||    
T  23405191 gggtccccgtgagcttagctcagttggt-agggacattgcataatatatgcaggggtcggggttcgaaccc 23405260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 25857367 - 25857298
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| |||||||||||||| ||||    
T  25857367 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagctggggttcgaacaccgg 25857298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 31223620 - 31223685
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||||||||||| ||| |||||| |||||| |||| | ||| |||||||||||||||| |||||||    
T  31223620 cccatgagcttagttcagttggta-gggatattgcatattatatgcaggggctggggtttgaacccc 31223685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 40535521 - 40535452
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| || ||| |||| | ||| ||||||||| ||||||||||||||||    
T  40535521 tccccgtgagcttagctcagttggtacgg-atattgcatattatatgcaggggccggggttcgaaccccgg 40535452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 1500970 - 1501026
Alignment:
Q  73 ttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    |||||||| |||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  1500970 ttagctcagttggta-gggatattgcatattatatgcaggggctggggttcgaacccc 1501026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 6636033 - 6635965
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgggcacg 137  Q
    ||||||||||||| |||||| |||||| |||| | ||| ||||||| | |||||||||||||||| ||||    
T  6636033 tgagcttagctcagttggta-gggatattgcatattatatgcagggacgggggttcgaaccccggacacg 6635965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 15654929 - 15654869
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    ||||||||||||| ||||||||| |||||||| || || |||| || |||||||||||||||    
T  15654929 tgagcttagctcagttggtaagg-ataatgcataaaatatgcaaggtctggggttcgaaccc 15654869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 27152354 - 27152414
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccc 129  Q
    |||||||| |||| |||||| ||||||||||| ||||| |||| || |||||||||||||||    
T  27152354 tgagcttaactcagttggta-gggataatgcataatatatgcaaggtctggggttcgaaccc 27152414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 3402726 - 3402678
Alignment:
Q  142 cctcacttattcat-tttaaggtgaatttctctagccactaggctattt 189  Q
    |||||||||||||| |||||||||||||| || ||||||||||| ||||    
T  3402726 cctcacttattcatctttaaggtgaatttttccagccactaggcgattt 3402678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 17487712 - 17487771
Alignment:
Q  72 cttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||| |||||| |||||| |||| | ||| ||||| ||||||||||||||||||||    
T  17487712 cttagctcagttggta-gggatattgcatattatatgcagtggctggggttcgaaccccgg 17487771  T

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Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 36182646 - 36182709
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  36182646 tgagcttagctcagttggta-gggatattgcatattatatgcaggagcaggggttcgaaccccgg 36182709  T

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Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 41509520 - 41509583
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  41509520 tgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 41509583  T

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Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 192
Target Start/End: Original strand, 42998718 - 42998754
Alignment:
Q  156 tttaaggtgaatttctctagccactaggctatttgac 192  Q
    |||||||||||||||||||||| |||||||| |||||    
T  42998718 tttaaggtgaatttctctagccgctaggctacttgac 42998754  T

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Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 44857300 - 44857237
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||||| |||||| |||| | ||| ||||||||| | ||||||||||||||    
T  44857300 tgagcttagctcagttggta-gggatattgcatattatatgcaggggccgaggttcgaaccccgg 44857237  T

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Target: scaffold0008 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 122604 - 122685
Alignment:
Q  209 agattttataattttaattggattctagattttactttgaaaaattactcc----aatatgaacaaattctagattttatttt 287  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||||| |||    |||||||||||| |||||||||||||||    
T  122604 agattttataattttaattgaattttagattttattttgaaaaatta-tccgacgaatatgaacaaaatctagattttatttt 122685  T

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Target: scaffold0339 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 12745 - 12784
Alignment:
Q  203 tataggagattttataattttaattggattctagatttta 242  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12745 tataggagattttataattttaattggattctagatttta 12784  T

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Target: scaffold0339; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 12689 - 12648
Alignment:
Q  142 cctcacttattcat-tttaaggtgaatttctctagccactag 182  Q
    |||||||||||||| |||||||||||||| ||||||||||||    
T  12689 cctcacttattcatctttaaggtgaatttttctagccactag 12648  T

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Target: scaffold0121 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 46524 - 46591
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||||||||||||||||||    
T  46524 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggctggggttcgaacccc 46591  T

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Target: scaffold0108 (Bit Score: 36; Significance: 0.00000000005; HSPs: 3)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 18263 - 18224
Alignment:
Q  203 tataggagattttataattttaattggattctagatttta 242  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  18263 tataggagattttataattttaattggattttagatttta 18224  T

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Target: scaffold0108; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 18429 - 18468
Alignment:
Q  203 tataggagattttataattttaattggattctagatttta 242  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  18429 tataggagattttataattttaattggattttagatttta 18468  T

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Target: scaffold0108; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 18373 - 18325
Alignment:
Q  142 cctcacttattcat-tttaaggtgaatttctctagccactaggctattt 189  Q
    |||||||||||||| |||||||||||||| |||||||||||||| ||||    
T  18373 cctcacttattcatctttaaggtgaatttttctagccactaggcgattt 18325  T

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Target: scaffold0128 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 17618 - 17687
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| |||||||||||||||||||    
T  17618 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagctggggttcgaaccccgg 17687  T

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Target: scaffold0088 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 10898 - 10829
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| ||||||||| ||||||||||||||||    
T  10898 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccccgg 10829  T

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Target: scaffold0204 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 10576 - 10612
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaata 104  Q
    ||||||||||||||||| |||||||||||||||||||    
T  10576 tgagcttagctcatttgataagggataatgcacaata 10612  T

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Target: scaffold0519 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 3035 - 2965
Alignment:
Q  61 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||||||||||||||||||| |||  |||||| | |||| ||| | ||||||||| ||||||||||||||||    
T  3035 gtccccatgagcttagctcagttga-aagggacattgcataatttatgcaggggccggggttcgaaccccgg 2965  T

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Target: scaffold0054 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 22462 - 22521
Alignment:
Q  71 gcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaacccc 130  Q
    |||||||||| ||||||||||||||| || | ||| || |||||||| ||||||||||||    
T  22462 gcttagctcacttggtaagggataatacatattatatgtaggggctgaggttcgaacccc 22521  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 59781 - 59850
Alignment:
Q  62 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||| ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  59781 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 59850  T

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Target: scaffold0460 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 13266 - 13206
Alignment:
Q  71 gcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    |||||||||| |||||| |||||| |||| | ||| |||||||| |||||||||||||||||    
T  13266 gcttagctcagttggta-gggatattgcatattatatgcaggggttggggttcgaaccccgg 13206  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 17764 - 17727
Alignment:
Q  138 gacacctcacttattca-ttttaaggtgaatttctcta 174  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  17764 gacacctcacttattcatttttaaggtgaatttctcta 17727  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 25014 - 25090
Alignment:
Q  56 atagggtccccatgagcttagctcatttggtaagggataatgcacaat-atgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||| ||||| ||||||| |||| | |||| ||||||  || || ||||||||||||||||||||||||||    
T  25014 atagggtccccgtgagcatagctcagttggca-gggacaatgcattattatatgcaggggctggggttcgaaccccgg 25090  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 146769 - 146818
Alignment:
Q  64 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggg 113  Q
    |||| ||||||| ||||||| || ||||| ||||||||||||||||||||    
T  146769 cccacgagcttaactcatttagtgagggacaatgcacaatatgtgcaggg 146818  T

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Target: scaffold0366 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 926 - 863
Alignment:
Q  68 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccgg 132  Q
    ||||||||||||| |||||| |||||| |||| | ||| |||||| || ||||||||||||||||    
T  926 tgagcttagctcagttggta-gggatattgcatattatatgcaggagccggggttcgaaccccgg 863  T

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