View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2761_low_2 (Length: 687)
Name: NF2761_low_2
Description: NF2761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2761_low_2 |
 | |
|
| [»] scaffold1439 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 593; Significance: 0; HSPs: 42)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 593; E-Value: 0
Query Start/End: Original strand, 1 - 673
Target Start/End: Complemental strand, 22458658 - 22457986
Alignment:
| Q |
1 |
aaggtatgttatagtttttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458658 |
aaggtatgttatagtttttgatgatgtatggagcttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatc |
22458559 |
T |
|
| Q |
101 |
acaacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgt |
200 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22458558 |
acaacaagaaacatggatgttgcaaatgcatgtaagaaatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgt |
22458459 |
T |
|
| Q |
201 |
tcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagc |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458458 |
tcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagc |
22458359 |
T |
|
| Q |
301 |
aattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttg |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22458358 |
aattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttg |
22458259 |
T |
|
| Q |
401 |
aagatnnnnnnnnttgtaggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttc |
500 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458258 |
aagataaaaaaaattgtaggtctcggttaccatgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttc |
22458159 |
T |
|
| Q |
501 |
ctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagattt |
600 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458158 |
ctacaaatatactgattcggcaatggatggctgaaggatttgtgaaagatgatatggtaaaaacattggaagatgttgcagatggatatttaacagattt |
22458059 |
T |
|
| Q |
601 |
gatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22458058 |
gatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgat |
22457986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 593; E-Value: 0
Query Start/End: Original strand, 1 - 673
Target Start/End: Complemental strand, 22481639 - 22480967
Alignment:
| Q |
1 |
aaggtatgttatagtttttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481639 |
aaggtatgttatagtttttgatgatgtatggagcttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatc |
22481540 |
T |
|
| Q |
101 |
acaacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgt |
200 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22481539 |
acaacaagaaacatggatgttgcaaatgcatgtaagaaatcttcttttgttgaagtgtatgaaatgaaaggtttggctgaacaacaatctttggagttgt |
22481440 |
T |
|
| Q |
201 |
tcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagc |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481439 |
tcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttttaaaattgttgaaaaatgcaatggattgccactagc |
22481340 |
T |
|
| Q |
301 |
aattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttg |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22481339 |
aattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaaatctaaatatagagttaaaagaagatttg |
22481240 |
T |
|
| Q |
401 |
aagatnnnnnnnnttgtaggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttc |
500 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481239 |
aagataaaaaaaattgtaggtctcggttaccatgatctgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttc |
22481140 |
T |
|
| Q |
501 |
ctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagattt |
600 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481139 |
ctacaaatatactgattcggcaatggatggctgaaggatttgtgaaagatgatatggtaaaaacattggaagatgttgcagatggatatttaacagattt |
22481040 |
T |
|
| Q |
601 |
gatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22481039 |
gatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgat |
22480967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 673
Target Start/End: Complemental strand, 22358171 - 22357499
Alignment:
| Q |
1 |
aaggtatgttatagtttttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatc |
100 |
Q |
| |
|
|||||||||| |||| |||||||| |||||| | | |||||||| | ||||||| ||||||||||||||||||| |||||||||| || |||||||||| |
|
|
| T |
22358171 |
aaggtatgttgtagtgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatc |
22358072 |
T |
|
| Q |
101 |
acaacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgt |
200 |
Q |
| |
|
|| |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||| |
|
|
| T |
22358071 |
actacaagaaacatggatgttgcgaatacttgtaagaaatcttcttttgttgaagtgtatgaactaaaaggtttgactgtagaacaatcttttgagttgt |
22357972 |
T |
|
| Q |
201 |
tcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagc |
300 |
Q |
| |
|
||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| |||||||| |
|
|
| T |
22357971 |
tcaataagaaggcattccatgacttaaatggacgttgtccagaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattaccactagc |
22357872 |
T |
|
| Q |
301 |
aattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttg |
400 |
Q |
| |
|
||||||| ||||||||||||||||| || |||||||| || | || |||||||||||||||||||||| | ||||| ||||||| | ||| ||| |
|
|
| T |
22357871 |
aattgtagtcattggtggtattttagctcccaaagataaaattccaatggaatggtataagtttagtgaaaatataaatgcagagttagaggaatattcc |
22357772 |
T |
|
| Q |
401 |
aagatnnnnnnnnttgtaggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttc |
500 |
Q |
| |
|
| || || |||| | |||||||||||||| ||||| | |||||||||||||| ||||||||||||||||||||||||| | || ||||| |
|
|
| T |
22357771 |
ataataagaaaaattttaggatttagttaccatgatttgccttactacctcaagtcatgtttcttgtattttggattatatcctgaagactataaagttc |
22357672 |
T |
|
| Q |
501 |
ctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagattt |
600 |
Q |
| |
|
| |||| | ||||| ||| |||||||| |||||||| || |||||| | || | | || ||| ||||||| |||||||| |||||||||| ||| || |
|
|
| T |
22357671 |
attcaaagacattgactcgacaatggattgctgaagggtttgtgaaacaatatggggaaagaacgatggaagaggttgcagaaggatatttaaaagagtt |
22357572 |
T |
|
| Q |
601 |
gatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
|| |||| ||||||||||||||| |||||| |||||||||||||||| |||| ||||| ||||||||||| |
|
|
| T |
22357571 |
aatacatagaagtttggtgcaagtagattcaatcagtattgatggaagagtaaaacgttgtcgtgttcatgat |
22357499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 1 - 673
Target Start/End: Complemental strand, 22442908 - 22442239
Alignment:
| Q |
1 |
aaggtatgttatagtttttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatc |
100 |
Q |
| |
|
|||||||||| |||| |||||||| |||||| | | |||||||| | ||||||| ||||||||||||||||||| |||||||||| || |||||||||| |
|
|
| T |
22442908 |
aaggtatgttgtagtgtttgatgatgtatgggagtcacattttttgcatgatattgaatttgctatgattgataacaaaaagggttctaggatattaatc |
22442809 |
T |
|
| Q |
101 |
acaacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgt |
200 |
Q |
| |
|
|| |||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| ||||||||| ||| |||||||||||||||||||| |
|
|
| T |
22442808 |
actacaagaaacatggatgttgcaaatacttgtaagaaatcttcttttgtt------tacgaactaaaaggtttgactgtagaacaatctttggagttgt |
22442715 |
T |
|
| Q |
201 |
tcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagc |
300 |
Q |
| |
|
||||||||||| |||| || ||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
22442714 |
tcaataagaaggcatttcatgacttaaacggacgttgtccaaaaaatcttattggtatatcttccaaaattgttgaaaaatgcaatggattaccactagc |
22442615 |
T |
|
| Q |
301 |
aattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatag---agttaaaagaagat |
397 |
Q |
| |
|
||||||| ||||||||||||||||| || |||||||||||||||| ||||||||| |||||| ||||| | ||||| || |||| || ||| || |
|
|
| T |
22442614 |
aattgtagtcattggtggtattttagctcccaaagatagaaatacaattgaatggtatgagtttaatgaaaatataaatgcagatcagtttaaggaatat |
22442515 |
T |
|
| Q |
398 |
ttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatag |
497 |
Q |
| |
|
| | | || |||| ||| |||||||||||||| ||| ||| |||||||||||||| |||||||||||||||||||| |||| | | || |
|
|
| T |
22442514 |
tccatagtaagaaaaattttaggactcagttaccatgatttgccttgcaacctcaagtcatgtttcttgtattttggattatatcccgaagactatgaag |
22442415 |
T |
|
| Q |
498 |
ttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacaga |
597 |
Q |
| |
|
| | |||| | ||||| ||| |||||||| |||||||| || |||||||| || | | || ||||||||| | |||||||| |||||||||| || |
|
|
| T |
22442414 |
cttgttcaaagacattgactcgtcaatggatagctgaagggtttgtgaaagaatatggggaaaggacattggaaaaggttgcagaaggatatttaaaagt |
22442315 |
T |
|
| Q |
598 |
tttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
|| ||| ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
22442314 |
gttaatctgtagaagtttggtgcaagtagtttcaaccagtattgatggaagagtaaaaagttgccgtgttcatgat |
22442239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 673
Target Start/End: Complemental strand, 22368096 - 22367421
Alignment:
| Q |
1 |
aaggtatgttatagtttttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatc |
100 |
Q |
| |
|
|||||| ||| |||| |||||||| |||||| ||| |||||||||| ||||||| ||||| ||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
22368096 |
aaggtacgttgtagtgtttgatgatgtatgggactcacatttttggaatgatattgaattttctatgattgataacaaaaatggttgtaagatattaatc |
22367997 |
T |
|
| Q |
101 |
acaacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgt |
200 |
Q |
| |
|
|||||||||||| ||||||| || |||||||||||||||||||||||||||||||| || |||| ||||||| ||||||| ||||||| || |||| |
|
|
| T |
22367996 |
acaacaagaaacgaggatgttgcagatgcttgtaagaaatcttcttttgttgaagtgcataaacttgaaggtttaagtgaagaaaaatctttagaattgt |
22367897 |
T |
|
| Q |
201 |
tcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagc |
300 |
Q |
| |
|
||||||||||| | ||||| ||||| | |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || |
|
|
| T |
22367896 |
tcaataagaaggcgttccatgacttgagcggatattgtccagaaaatcttattgatatatcttccaaaattgttgaaaaatgcaatggattaccactcgc |
22367797 |
T |
|
| Q |
301 |
aattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatag---agttaaaagaagat |
397 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||| ||| || ||||||| |||||||||||||| | ||||| || ||| ||| ||| || |
|
|
| T |
22367796 |
aattgtagtcattggtggtattttagcttgcaaagataggaatccaattgaatggtctaagtttagtgaaaatataaatgcagatcagtcaaaggaatat |
22367697 |
T |
|
| Q |
398 |
ttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatag |
497 |
Q |
| |
|
| | ||| || |||| || |||||||||||||| ||| ||| |||||||||||||| ||||| ||||||||||||||||||| | | | |
|
|
| T |
22367696 |
tccatgataaaaaaaattctaggacttagttaccatgatttgccttgcaacctcaagtcatgtttcttgtactttggattatatcctgaagactcaaatg |
22367597 |
T |
|
| Q |
498 |
ttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacaga |
597 |
Q |
| |
|
||| | |||||||||||| ||| |||||||| |||||||| || |||||||| || || | || ||||||||||| |||||||| ||| |||||| ||| |
|
|
| T |
22367596 |
ttcgttcaaatatattgactcgtcaatggattgctgaagggtttgtgaaagaagaaaggggaatgacattggaagaggttgcagaaggacatttaataga |
22367497 |
T |
|
| Q |
598 |
tttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
|||||| ||||| ||||||||| ||||| | || | |||||||||||||| | | ||||| ||||||||||| |
|
|
| T |
22367496 |
gttgatccgtagaagtttggtgcgagtagatgggatcactattgatggaagagtagacagttgccgtgttcatgat |
22367421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 17 - 673
Target Start/End: Complemental strand, 22436787 - 22436128
Alignment:
| Q |
17 |
tttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgg |
116 |
Q |
| |
|
||||| || |||||||||||| || ||||| ||||||| ||||||||||||||||||| ||| |||| |||| |||||||||||||||| || ||| |
|
|
| T |
22436787 |
tttgacgatgtatggaacttaaatatttggaatgatattgaatttgctatgattgataacttaaatggttctaaggtattaatcacaacaaggaaaatga |
22436688 |
T |
|
| Q |
117 |
atgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacatt |
216 |
Q |
| |
|
||||| ||||| ||| ||||| |||||||||||||||||| ||||||| ||||||| |||||||| ||||||| || ||||||||||||||| |||| |
|
|
| T |
22436687 |
atgttgcaaattcttttaagagatcttcttttgttgaagtacatgaacttcaaggtttaactgaagaaaaatctttagaattgttcaataagaaggcatt |
22436588 |
T |
|
| Q |
217 |
ccacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggt |
316 |
Q |
| |
|
||| |||| | ||| |||||||| |||||||||||||||||||||| ||||||||| |||||||||| ||||| || |||||||||||| ||| |||| |
|
|
| T |
22436587 |
ccataacttgagtggatgttgtccacaaaatcttattgatatatcttccaaaattgttaaaaaatgcaaaggattacctctagcaattgtagtcactggt |
22436488 |
T |
|
| Q |
317 |
ggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatag---agttaaaagaagatttgaagatnnnnnnnn |
413 |
Q |
| |
|
||| ||||||||||||||||||||||| | | |||||||| ||||||||||||| | ||||| || ||| ||| ||| ||| | || |
|
|
| T |
22436487 |
ggtcttttatcttgcaaagatagaaatcctactgaatggtacaagtttagtgaaaatataaatgcagatcagtcaaatgaatattccataataagaaaaa |
22436388 |
T |
|
| Q |
414 |
ttgtaggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatatt |
513 |
Q |
| |
|
|| |||| | |||||||||||||| ||||| | |||||||| ||||| ||||||||||||||||||||||||| | |||||||| | |||| | ||| |
|
|
| T |
22436387 |
ttctaggatttagttaccatgatttgccttactacctcaagtcgtgtttcttgtattttggattatatcctgaagactatatagttcgttcaaaaacatt |
22436288 |
T |
|
| Q |
514 |
gattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggt |
613 |
Q |
| |
|
|| ||| |||||||| |||||||| ||||||||||| || || | || |||||||||||| ||||| | |||||||||| ||| ||| ||| |||| || |
|
|
| T |
22436287 |
gactcgccaatggattgctgaagggttcgtgaaagaagagaggggaaggacattggaagatattgcaaaaggatatttaatagagttggtcaatagaagt |
22436188 |
T |
|
| Q |
614 |
ttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
22436187 |
ttggtgcatgtagtttcaataagtattgatggaagagtaaaaagttgtcgtgttcatgat |
22436128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 1 - 673
Target Start/End: Complemental strand, 22468117 - 22467448
Alignment:
| Q |
1 |
aaggtatgttatagtttttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatc |
100 |
Q |
| |
|
||||||||||||||| |||||||| |||||| | | |||||||||| ||||||| ||||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
22468117 |
aaggtatgttatagtgtttgatgatgtatgggattcacatttttggtatgatattgaatttgctatgattgataacaaaaatggttgtaagatattaatc |
22468018 |
T |
|
| Q |
101 |
acaacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgt |
200 |
Q |
| |
|
||||| ||||||| || |||| || |||||||||||||| ||||||| | ||||| |||| ||| || |||| |||||||||| || ||||| |||| |
|
|
| T |
22468017 |
acaacgagaaacaaggttgttgcagatgcttgtaagaaa---tcttttggtaaagtgcatgagctggaacgtttatctgaagaacagtccttggaattgt |
22467921 |
T |
|
| Q |
201 |
tcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagc |
300 |
Q |
| |
|
| || |||||| | ||||| ||||| ||||| |||||||||||||||| |||| |||||||| |||||||||||||| ||||| ||||| || ||||| |
|
|
| T |
22467920 |
ttaaaaagaaggcgttccatgacttggacggagtttgtccagaaaatctttttgacatatcttccaaaattgttgaaaactgcaaaggattacctctagc |
22467821 |
T |
|
| Q |
301 |
aattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttg |
400 |
Q |
| |
|
|||||| ||| |||| |||||||||| ||||| |||||||| || ||||||| ||| |||||||||| | ||||| |||||||| | | | ||| |
|
|
| T |
22467820 |
aattgttgtcaccggtgatattttatctcgcaaaaatagaaatccaattgaatggtctaaatttagtgaaaatataaatgtagagttagagggatattcc |
22467721 |
T |
|
| Q |
401 |
aagatnnnnnnnnttgtaggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttc |
500 |
Q |
| |
|
| || || |||| | |||||||| |||| ||||||| |||||||||||||| ||||||||||||||||||||||||| | |||||||| |
|
|
| T |
22467720 |
acaataagaaaaattttaggatttagttaccataatttaccttacaacctcaagtcatgtttcttgtattttggattatatcctgaagactatatagttc |
22467621 |
T |
|
| Q |
501 |
ctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagattt |
600 |
Q |
| |
|
| |||| | |||| ||| |||||||| |||||||| || ||||| || || || | | ||||||||||| ||||| || |||||||||| ||| || |
|
|
| T |
22467620 |
attcaaagacgttgactcgccaatggattgctgaagggtttgtgaaggaagacagggggaggacattggaagaggttgctgaaggatatttaatagagtt |
22467521 |
T |
|
| Q |
601 |
gatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
|||| |||| |||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
22467520 |
gatccatagaagtttggtgcaagtagtttcaataagtattgatggaagagtaaaaagttgtcgtgttcatgat |
22467448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 1 - 371
Target Start/End: Complemental strand, 22431342 - 22430972
Alignment:
| Q |
1 |
aaggtatgttatagtttttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatc |
100 |
Q |
| |
|
|||||| ||| |||| |||||||| |||||| | | | |||||||| ||||||| ||||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
22431342 |
aaggtacgttgtagtgtttgatgatgtatgggagtcaaatttttggtatgatattgaatttgctatgattgataacaaaaatggttgtaagatattaatc |
22431243 |
T |
|
| Q |
101 |
acaacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgt |
200 |
Q |
| |
|
||||||||||||| ||||| | | |||||||||||||||||||||||||||||||| ||||||| |||||||| | |||||| ||||||| || |||| |
|
|
| T |
22431242 |
acaacaagaaacaaggatggtgtagatgcttgtaagaaatcttcttttgttgaagtgcatgaacttaaaggtttaaccgaagaaaaatctttagaattgt |
22431143 |
T |
|
| Q |
201 |
tcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagc |
300 |
Q |
| |
|
|||||||||| ||||| ||||| | |||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| || |
|
|
| T |
22431142 |
tcaataagaaagtgttccatgacttgagcggatattgtccagaaaatcttatagatatatcttccaaaattgttgaaaaatgcaatggattaccactcgc |
22431043 |
T |
|
| Q |
301 |
aattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaa |
371 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||| ||| || ||||||| |||||||||||||| |
|
|
| T |
22431042 |
aattgtagtcattggtggtattttagcttgcaaagataggaatccaattgaatggtctaagtttagtgaaa |
22430972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 1 - 673
Target Start/End: Complemental strand, 22635672 - 22635003
Alignment:
| Q |
1 |
aaggtatgttatagtttttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatc |
100 |
Q |
| |
|
|||||||||| |||| |||||||| |||||| | | |||||||||| |||||| ||||||||||||||||||| ||||| |||||| |||||||||| |
|
|
| T |
22635672 |
aaggtatgttttagtgtttgatgatgtatgggagtcacatttttggtctgatattgaatttgctatgattgataacaaaaatagttgtaggatattaatc |
22635573 |
T |
|
| Q |
101 |
acaacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgt |
200 |
Q |
| |
|
||||||||||| | ||||||| ||||||||||||| ||||||| ||| | ||||| || | ||| || |||| ||||| ||||||||||||| |||| |
|
|
| T |
22635572 |
acaacaagaaaaaaggatgttgcaaatgcttgtaataaatctt---ttggtaaagtgcataatctggaacgtttatctgaaaaacaatctttggaattgt |
22635476 |
T |
|
| Q |
201 |
tcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagc |
300 |
Q |
| |
|
| |||||| | |||| | ||| |||| || ||| ||| ||||||||||||||||||| |||||||| ||||||||||| ||||| || ||||| |
|
|
| T |
22635475 |
ttctaaagaaggcgctccatggcttggacggcatttttcctgaatatcttattgatatatcttccaaaattgtcgaaaaatgcaaaggattacctctagc |
22635376 |
T |
|
| Q |
301 |
aattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttg |
400 |
Q |
| |
|
||||||| ||||||||| |||| ||||| ||| ||||||||| || |||||||| ||||||||||||| | ||||| ||||||| | ||| ||| |
|
|
| T |
22635375 |
aattgtagtcattggtgatattctatctcgcacggatagaaattcaatagaatggtcgaagtttagtgaaaatataaatgcagagttagaggaatattcc |
22635276 |
T |
|
| Q |
401 |
aagatnnnnnnnnttgtaggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttc |
500 |
Q |
| |
|
| ||| || |||| || |||||||||||||| | | | | |||||||||||||| ||||||||||||||||||||||||| | |||||||| |
|
|
| T |
22635275 |
atgataagaaaaattttaggacttagttaccatgatttgccatgctacctcaagtcatgtttcttgtattttggattatatcctgaagactatatagttc |
22635176 |
T |
|
| Q |
501 |
ctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagattt |
600 |
Q |
| |
|
| |||| | ||||| ||| |||||||| |||||||| ||||||||||| || || | || ||||| ||||| |||||||| ||||||||| ||| || |
|
|
| T |
22635175 |
gttcaaaaacattgactcgccaatggattgctgaagggttcgtgaaagaagacaggggaaggacatttgaagaggttgcagaaggatatttagtagagtt |
22635076 |
T |
|
| Q |
601 |
gatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
|||| |||| ||||||||||||||||||||| ||||||||||||||||| ||||||||| | ||||||||| |
|
|
| T |
22635075 |
gatccatagaagtttggtgcaagtagtttcaactagtattgatggaagagtaaaaagttgccgcgttcatgat |
22635003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 12 - 673
Target Start/End: Complemental strand, 22630596 - 22629940
Alignment:
| Q |
12 |
tagtttttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaa |
111 |
Q |
| |
|
|||| |||||||| |||||| | ||| |||||| ||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
22630596 |
tagtgtttgatgatgtatgggaggcacaattttggtatgatattgaatttgctatgattgataacaaaaatggttgtaagatattaatcacaacaagaaa |
22630497 |
T |
|
| Q |
112 |
catggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaag |
211 |
Q |
| |
|
|| ||||||| || |||||||||||||||||| ||| ||||| |||| ||| || |||| |||||||||| |||||||| ||||| || ||||| |
|
|
| T |
22630496 |
caaggatgttgcagatgcttgtaagaaatctt---ttggcaaagtgcatgagctggaacgtttatctgaagaacagtctttggaattgtttaaaaagaaa |
22630400 |
T |
|
| Q |
212 |
acattccacgacttaaacggacgttgtccagaaaatcttattgatatatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactca |
311 |
Q |
| |
|
| ||||| ||||| | ||| |||||||||||||||| |||| |||||||| |||||||||||||||||||| ||||| || |||||||||||| ||| |
|
|
| T |
22630399 |
gcgttccatgacttggatggattttgtccagaaaatctttttgacatatcttccaaaattgttgaaaaatgcaaaggattacctctagcaattgtagtca |
22630300 |
T |
|
| Q |
312 |
ttggtggtattttatcttgcaaagatagaaatacatcagaatggtataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnn |
411 |
Q |
| |
|
|||| |||||||||| |||||| ||||||| || ||||||| |||||||||||||| | ||||| |||||||| | ||| ||| | || |
|
|
| T |
22630299 |
ccggtgatattttatctcgcaaagttagaaatccaattgaatggtctaagtttagtgaaaatataaatgtagagttagaggaatattccacaataagaaa |
22630200 |
T |
|
| Q |
412 |
nnttgtaggtctcggttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatata |
511 |
Q |
| |
|
| |||| | ||||||||||||| ||||||| |||||||||||||| |||||||||||||| |||||||||| | |||||||| | |||| | |
|
|
| T |
22630199 |
aaatttaggatttagttaccatgatttaccttacaacctcaagtcatgtttcttgtattttggattctatcctgaagactatatagttcgttcaaaggtg |
22630100 |
T |
|
| Q |
512 |
ttgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagag |
611 |
Q |
| |
|
|||| ||| |||||||| |||||||| || |||||||| | | | || |||||||||||| |||| ||| |||||||||| ||| ||| || ||||| |
|
|
| T |
22630099 |
ttgactcgccaatggatcgctgaagggtttgtgaaagaagtcaagggaagaacattggaagaggttggagaaggatatttaatagagttggtccgtagaa |
22630000 |
T |
|
| Q |
612 |
gtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||| |||||||||| |||| |||||| |
|
|
| T |
22629999 |
gtttggtgcaagtagtttcaacaagtat--atggaagagtaaaaagttgtcgtgtacatgat |
22629940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 57 - 669
Target Start/End: Complemental strand, 22353923 - 22353313
Alignment:
| Q |
57 |
aatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagt |
156 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||| || ||| |||||||||||||| | | | |||| |
|
|
| T |
22353923 |
aatttgctatgattgataacaaaaatggttgtaagatattaatcacaacaagaaacaaggatgttacagatgattgtaagaaatctt---tcggtaaagt |
22353827 |
T |
|
| Q |
157 |
gtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattccacgacttaaacggacgttgtccagaaaatcttattgat |
256 |
Q |
| |
|
| |||| ||| || |||| ||||| ||||||||||||| ||||| || |||||| | |||| ||||| ||||| ||||||| |||||||| || || |
|
|
| T |
22353826 |
gcatgagctggaacgtttatctgaaaaacaatctttggatttgtttaaaaagaaggcgttccgtgacttggacggattttgtccaaaaaatcttttttat |
22353727 |
T |
|
| Q |
257 |
atatcttcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatcttgcaaagatagaaatacatcagaatggt |
356 |
Q |
| |
|
|||||||| ||||| ||||||||||||| ||||| || || ||||||||| |||| ||| |||||||||| |||||||||||||| || ||||||| |
|
|
| T |
22353726 |
atatcttccgaaattattgaaaaatgcaaaggattacctctcgcaattgtagtcataggtaatattttatctcgcaaagatagaaatccaattgaatggt |
22353627 |
T |
|
| Q |
357 |
ataagtttagtgaaattctaaatatagagttaaaagaagatttgaagatnnnnnnnnttgtaggtctcggttaccatgatttgtc-ttacaatctcaagt |
455 |
Q |
| |
|
|||||||||||||| | ||||| ||||||| | ||| ||| | || || |||| | |||||||||||||| | |||| | ||||||| |
|
|
| T |
22353626 |
ctaagtttagtgaaaatataaatgcagagttagaggaatattccataataagaaaaattttaggatttagttaccatgatttgcctttactacctcaagt |
22353527 |
T |
|
| Q |
456 |
catgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgatag |
555 |
Q |
| |
|
||||||| ||||||||||||||||||| |||| | |||| | || ||| ||||| ||| |||||||| ||||| || || |||||||| | | |
|
|
| T |
22353526 |
catgtttcttgtattttggattatatctcgaagactacgaagtttattcagatacattgactcgtcaatggattgctgaggggtttgtgaaagaatacgg |
22353427 |
T |
|
| Q |
556 |
cgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaa |
655 |
Q |
| |
|
| || ||| ||||||| |||||||| |||||||||| ||| || ||| |||| ||||||||||||||| |||| | |||||||||||||||| |||| |
|
|
| T |
22353426 |
gggaaggacaatggaagaggttgcagaaggatatttaaaagagttaatccatagaagtttggtgcaagtagattcagtcagtattgatggaagagtaaaa |
22353327 |
T |
|
| Q |
656 |
agttgttgtgttca |
669 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
22353326 |
agttgtcgtgttca |
22353313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 426 - 673
Target Start/End: Complemental strand, 22430914 - 22430667
Alignment:
| Q |
426 |
gttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatg |
525 |
Q |
| |
|
|||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||| ||| | ||||||| | |||| | ||| | | | ||||| |
|
|
| T |
22430914 |
gttaccatgatttgccttgcaacctcaagtcatgtttcttgtattttggattatatcctaaagactatatagtttattcaaagacattaacttgtcaatg |
22430815 |
T |
|
| Q |
526 |
gatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagta |
625 |
Q |
| |
|
||| |||||||| || |||||||| | | | || |||||| |||| |||||||| |||||||||| ||| |||||| |||| |||||||||||||| |
|
|
| T |
22430814 |
gattgctgaagggtttgtgaaagaaaaaacgggaaggacattgaaagaggttgcagaaggatatttaatagagttgatccatagaagtttggtgcaagta |
22430715 |
T |
|
| Q |
626 |
gtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
| |||||| |||||||||||||||| || ||||||| ||||||||||| |
|
|
| T |
22430714 |
gattcaataagtattgatggaagagtaagaagttgtcgtgttcatgat |
22430667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 455 - 673
Target Start/End: Complemental strand, 22620599 - 22620381
Alignment:
| Q |
455 |
tcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaaagatgata |
554 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||| || || |||| | |||| | |||||||||||||||||| |||||||| || || ||||| || | |
|
|
| T |
22620599 |
tcatgtttattgtattttggattatatccagaagattataaagttgattcaaagagattgattcggcaatggatagctgaagggtttgtaaaagaagaaa |
22620500 |
T |
|
| Q |
555 |
gcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaa |
654 |
Q |
| |
|
| | || || |||||||| |||||||| ||||| |||||||| |||||| |||| |||||||||||||| |||| | || || ||||||| | |||| |
|
|
| T |
22620499 |
gggggaatactttggaagaagttgcagaaggatacttaacagagttgatccatagaagtttggtgcaagtatcttcactaagaatcgatggaaaaacaaa |
22620400 |
T |
|
| Q |
655 |
aagttgttgtgttcatgat |
673 |
Q |
| |
|
||||||||| ||||||||| |
|
|
| T |
22620399 |
aagttgttgcgttcatgat |
22620381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 66 - 328
Target Start/End: Complemental strand, 22621018 - 22620753
Alignment:
| Q |
66 |
tgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaact |
165 |
Q |
| |
|
|||||||||||||||| || |||||||||| || |||||||||| ||||||||| | | | |||||| |||||||||||| |||| ||| ||||||| |
|
|
| T |
22621018 |
tgattgataataaaaatgggagtaagatattgattacaacaagaagtatggatgttgctatttattgtaaaaaatcttcttttattgaggtgcatgaact |
22620919 |
T |
|
| Q |
166 |
gaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattcc---acgacttaaacggacgttgtccagaaaatcttattgatatatct |
262 |
Q |
| |
|
|| ||| |||| ||||||||||| |||||||||||||||||| ||| | ||||| | ||| |||||||| || |||| |||||||||||| |
|
|
| T |
22620918 |
acaacctttaactgaggaacaatcttttgagttgttcaataagaaggtatttcgatttgactttgatggaagttgtccaaaagatctaattgatatatct |
22620819 |
T |
|
| Q |
263 |
tcaaaaattgttgaaaaatgcaatggattgccactagcaattgtactcattggtggtattttatct |
328 |
Q |
| |
|
|| |||||| | ||||||||| || || ||||||||||||||| | |||||||| |||||||| |
|
|
| T |
22620818 |
tccgaaattgctagaaaatgcaagggtttaccactagcaattgtagccgttggtggtcttttatct |
22620753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 426 - 673
Target Start/End: Complemental strand, 30989037 - 30988790
Alignment:
| Q |
426 |
gttaccatgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatg |
525 |
Q |
| |
|
||||| |||||||| ||||| |||||||||||| ||||||||||||||| ||||||| |||| || | |||| |||| | ||||||||| ||||| |
|
|
| T |
30989037 |
gttacgatgatttgccttactctctcaagtcatgcttgttgtattttggaatatatccagaagattatgaagttaaatcaaagagattgattcgacaatg |
30988938 |
T |
|
| Q |
526 |
gatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagta |
625 |
Q |
| |
|
| | |||||||| |||||||| || || || | || || |||||||| |||||||| |||||||||||||| |||||| |||| | |||||||||||| |
|
|
| T |
30988937 |
ggtagctgaagggttcgtgaaggaggaaagagggaagactttggaagacgttgcagaaggatatttaacagagttgatccatagaagcttggtgcaagta |
30988838 |
T |
|
| Q |
626 |
gtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
||| |||| ||||||| | ||| ||| ||||| ||||||||||| |
|
|
| T |
30988837 |
tcttcggttagagttgatggtaaagctaaaggttgtcgtgttcatgat |
30988790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 447 - 673
Target Start/End: Complemental strand, 22656777 - 22656551
Alignment:
| Q |
447 |
atctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggctgaaggattcgtgaa |
546 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||| |||| || | |||| |||| | | |||| ||||||||||| |||||||| || ||||| |
|
|
| T |
22656777 |
atcttaagtcatgtttgttgtattttggaatatatccagaagattatgaagttgaatcaaagagagtgatacggcaatggatagctgaaggttttgtgaa |
22656678 |
T |
|
| Q |
547 |
agatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatgga |
646 |
Q |
| |
|
||| || || | ||||| |||||||| |||||||| |||||||||||||| ||||| | || ||||||| |||||| ||| |||| ||||| ||| |
|
|
| T |
22656677 |
agaagaaagggggaaaactttggaagaagttgcagaaggatatttaacagagttgattcgccgatgtttggtacaagtatcctcagttagaattgacgga |
22656578 |
T |
|
| Q |
647 |
agagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
| | | |||||||||||||| |||||| |
|
|
| T |
22656577 |
aaaactaaaagttgttgtgtccatgat |
22656551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 563 - 673
Target Start/End: Complemental strand, 37930467 - 37930357
Alignment:
| Q |
563 |
acattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgtt |
662 |
Q |
| |
|
||||||||| | ||||| || |||||||||| ||| || ||| ||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
37930467 |
acattggaaaaggttgcggaaggatatttaaaagagttaatctgtagaagtttggtgcaagtagtttcaaccggtattgatggaagagtaaaaagttgtc |
37930368 |
T |
|
| Q |
663 |
gtgttcatgat |
673 |
Q |
| |
|
||||||||||| |
|
|
| T |
37930367 |
gtgttcatgat |
37930357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 36 - 217
Target Start/End: Complemental strand, 30989439 - 30989258
Alignment:
| Q |
36 |
tacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtttcaaatgcttgtaa |
135 |
Q |
| |
|
||||||||||||||||||| |||||||| | |||||||||||||| || |||||||||| ||||||||||||||| | |||||| ||||||| |
|
|
| T |
30989439 |
tacatttttgggatgatattgaatttgctgtaattgataataaaaatggaagtaagatatttatcacaacaagaaacctagatgttgtgttgtcttgtaa |
30989340 |
T |
|
| Q |
136 |
gaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
217 |
Q |
| |
|
|||||||||| | |||||||| ||| || || ||| |||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30989339 |
aaaatcttcttatattgaagtgcttgagttgcaacctttaaatgaacaacaatctttggagttgttcaataagaaggcattc |
30989258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 66 - 216
Target Start/End: Complemental strand, 22648288 - 22648138
Alignment:
| Q |
66 |
tgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaact |
165 |
Q |
| |
|
|||||||||||||||| || |||||||||| || ||||||||||| ||||||||| | | |||||||||||||||||| |||||||||||||| | |
|
|
| T |
22648288 |
tgattgataataaaaatgggagtaagatatttattacaacaagaaatatggatgttgccatatattgtaagaaatcttctttcattgaagtgtatgaatt |
22648189 |
T |
|
| Q |
166 |
gaaaggtttggctgaagaacaatctttggagttgttcaataagaagacatt |
216 |
Q |
| |
|
| || ||| | | ||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
22648188 |
gcaacctttaacaaatgaacaatcttttgagttgttcaacaagaagacatt |
22648138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 217
Target Start/End: Original strand, 22034830 - 22035030
Alignment:
| Q |
17 |
tttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgg |
116 |
Q |
| |
|
|||||||| || ||||| ||||||||||||||||||| ||||| || | ||||||| |||||| || |||||||||| || |||||||||||||||| |
|
|
| T |
22034830 |
tttgatgatgtttggaatgtacatttttgggatgatattgaattttctgtaattgatagtaaaaatggaagtaagatatttataacaacaagaaacatgg |
22034929 |
T |
|
| Q |
117 |
atgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacatt |
216 |
Q |
| |
|
||||| ||||||| ||||||||||| |||| ||| ||| ||| || ||| || |||||||||| ||| ||||||||||||||||| |||| |
|
|
| T |
22034930 |
atgttgtgttgtcttgtaaaaaatcttctttcattgaggtgcttgagctgcaacctttaactcaagaacaatcattgaagttgttcaataagaaggcatt |
22035029 |
T |
|
| Q |
217 |
c |
217 |
Q |
| |
|
| |
|
|
| T |
22035030 |
c |
22035030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 2 - 217
Target Start/End: Original strand, 21930719 - 21930934
Alignment:
| Q |
2 |
aggtatgttatagtttttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatca |
101 |
Q |
| |
|
||||||||| | || |||||||| || ||||| ||||||||||||||||||| |||||||| ||||||| |||||| || |||||||||| || | |
|
|
| T |
21930719 |
aggtatgttgtcgtgtttgatgatgtttggaatgtacatttttgggatgatattgaatttgctgcaattgatagtaaaaatggaagtaagatatttataa |
21930818 |
T |
|
| Q |
102 |
caacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgtt |
201 |
Q |
| |
|
||||||| |||||||||||| ||||||| ||||||||||| ||||| || ||| || || ||| || | |||||||||||||||||||| |
|
|
| T |
21930819 |
caacaaggaacatggatgttgtggtgtcttgtaaaaaatcttctttcattgaaatgcttgagttgcaacctttaactcatgaacaatctttggagttgtt |
21930918 |
T |
|
| Q |
202 |
caataagaagacattc |
217 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
21930919 |
caataagaaggcattc |
21930934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 17 - 216
Target Start/End: Complemental strand, 22615421 - 22615222
Alignment:
| Q |
17 |
tttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgg |
116 |
Q |
| |
|
|||||||| ||||||||| | ||||||||| |||| || ||| |||| | |||||||||||||| || |||||||||| || |||||||| || || | |
|
|
| T |
22615421 |
tttgatgatgtatggaacatgcatttttggaatgagattgaatctgctgtaattgataataaaaatggaagtaagatatttataacaacaaggaatatag |
22615322 |
T |
|
| Q |
117 |
atgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacatt |
216 |
Q |
| |
|
||||| || | ||||||||| |||||| || || ||||| |||| || || ||| |||||||||||||| |||||||||| ||||||||| |||| |
|
|
| T |
22615321 |
atgttgcactttcttgtaagagatcttcgttagtcaaagtgcatgagttgcaacctttaactgaagaacaatctctggagttgtttaataagaaggcatt |
22615222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 2 - 216
Target Start/End: Original strand, 21945922 - 21946136
Alignment:
| Q |
2 |
aggtatgttatagtttttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatca |
101 |
Q |
| |
|
||||||||| | || |||||||| || |||| ||||||||||||||||| | ||||||||| ||||||| |||||| || ||| |||||| || | |
|
|
| T |
21945922 |
aggtatgttgtcgtctttgatgatgtttggactgtacatttttgggatgattttaaatttgctgcaattgatagtaaaaatggaagtaggatatttataa |
21946021 |
T |
|
| Q |
102 |
caacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgtt |
201 |
Q |
| |
|
||||||| |||| | ||||| ||| ||||||| ||||||||||| ||| ||| ||| ||| || |||| || |||||||||||||||||||||| |
|
|
| T |
21946022 |
caacaaggaacaagaatgttgtgaattcttgtaaaaaatcttctttcactgagatgtttgagctgcaatgtttaactcaagaacaatctttggagttgtt |
21946121 |
T |
|
| Q |
202 |
caataagaagacatt |
216 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
21946122 |
taataagaaggcatt |
21946136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 22115398 - 22115502
Alignment:
| Q |
17 |
tttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatgg |
116 |
Q |
| |
|
|||||||| || ||||| ||||||||||||||||||| ||||| || | ||||||| |||||| || |||||||||| || |||||||||||||||| |
|
|
| T |
22115398 |
tttgatgatgtttggaatgtacatttttgggatgatattgaattttctgtaattgatagtaaaaatggaagtaagatatttataacaacaagaaacatgg |
22115497 |
T |
|
| Q |
117 |
atgtt |
121 |
Q |
| |
|
||||| |
|
|
| T |
22115498 |
atgtt |
22115502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 432 - 673
Target Start/End: Original strand, 21946364 - 21946605
Alignment:
| Q |
432 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
531 |
Q |
| |
|
|||||||| ||| | ||||||||||||| ||||| ||||||||| ||||||| |||| || | |||| | || | | ||||||| |||||||| || |
|
|
| T |
21946364 |
atgatttgccttgctatctcaagtcatgcttgttttattttggagtatatccagaagattatgaagttaaatcgaagagagtgattcgacaatggatagc |
21946463 |
T |
|
| Q |
532 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
631 |
Q |
| |
|
|||||| || ||||| || || || | || || |||||||| || ||||| |||||||||||||| |||||| |||| | |||| |||||| |||| |
|
|
| T |
21946464 |
tgaagggtttgtgaaggaggaaagagggaagactttggaagaagtggcagaaggatatttaacagagttgatccatagaagcctggttcaagtatcttca |
21946563 |
T |
|
| Q |
632 |
attagtattgatggaagagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
|||| |||||||| | ||| ||| ||||| ||||||||||| |
|
|
| T |
21946564 |
cttagaattgatggtaaagctaaaggttgtcgtgttcatgat |
21946605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 18967155 - 18967036
Alignment:
| Q |
2 |
aggtatgttatagtttttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatca |
101 |
Q |
| |
|
||||||||| | || |||||||| || |||| |||||||||||||||||||| |||||| | | |||||||||||||| || |||| ||||| || | |
|
|
| T |
18967155 |
aggtatgttgttgtgtttgatgatgtttggagtttacatttttgggatgatattgaatttgttgtaattgataataaaaaaggaagtaacatattgataa |
18967056 |
T |
|
| Q |
102 |
caacaagaaacatggatgtt |
121 |
Q |
| |
|
||||||| ||| |||||||| |
|
|
| T |
18967055 |
caacaaggaacctggatgtt |
18967036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 432 - 483
Target Start/End: Original strand, 22180157 - 22180208
Alignment:
| Q |
432 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcc |
483 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22180157 |
atgatttgccttactatctcaagtcatgtttgttgtattttggagtatatcc |
22180208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 566 - 673
Target Start/End: Complemental strand, 22647776 - 22647669
Alignment:
| Q |
566 |
ttggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtg |
665 |
Q |
| |
|
|||||||| |||||||| |||||||||| || |||||| |||| ||||||| |||||| |||| |||| |||||||||| | | |||||||| |||| |
|
|
| T |
22647776 |
ttggaagaagttgcagaacgatatttaactgagttgatccatagaagtttggttcaagtatcttcagttagaattgatggaaaaactaaaagttgctgtg |
22647677 |
T |
|
| Q |
666 |
ttcatgat |
673 |
Q |
| |
|
|||||||| |
|
|
| T |
22647676 |
ttcatgat |
22647669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 432 - 673
Target Start/End: Original strand, 22115825 - 22116066
Alignment:
| Q |
432 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
531 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||||| |||| || |||| || | |||| |||| | | | | ||| |||||||| || |
|
|
| T |
22115825 |
atgatttgccttactatctcaagtcatgtttgttgtattttggagtatacccagaagattttgaagttaaatcaaagagaatcactcgacaatggatagc |
22115924 |
T |
|
| Q |
532 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
631 |
Q |
| |
|
|||||| || ||||| || || || | ||| || |||| || || ||||| |||||| ||||||| |||||| |||| || |||| |||||| ||| |
|
|
| T |
22115925 |
tgaagggtttgtgaaggaggaaaggggaaagactatggatgaagtggcagagggatatataacagagttgatccatagaagtatggttcaagtatcttcg |
22116024 |
T |
|
| Q |
632 |
attagtattgatggaagagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
|||| |||||||| | ||| ||| ||||| ||||||||||| |
|
|
| T |
22116025 |
cttagaattgatggcaaagctaaaggttgtcgtgttcatgat |
22116066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 432 - 488
Target Start/End: Original strand, 21937893 - 21937949
Alignment:
| Q |
432 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
488 |
Q |
| |
|
|||||||| ||||| ||||||||||||| ||||||||||||||| ||||||| |||| |
|
|
| T |
21937893 |
atgatttgccttactatctcaagtcatgcttgttgtattttggagtatatccagaag |
21937949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 217
Target Start/End: Original strand, 21937451 - 21937666
Alignment:
| Q |
2 |
aggtatgttatagtttttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatca |
101 |
Q |
| |
|
||||| ||||| || |||||||| || |||| |||||||||||||||||||| |||||||| ||||||| |||||| || ||| |||||| || | |
|
|
| T |
21937451 |
aggtacgttatcgtgtttgatgatgtttggagtctacatttttgggatgatatcgaatttgctggaattgatagtaaaaatggaagtaggatatttataa |
21937550 |
T |
|
| Q |
102 |
caacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgtt |
201 |
Q |
| |
|
||||||| | || |||||| ||||||| ||||||||||| ||||||| ||| || || |||| || | |||||||||||||||||||| |
|
|
| T |
21937551 |
caacaaggataattgatgttgtggtgtcttgtaaaaaatcttctttcattgaagttcttgagttgcaatgtttaactcatgaacaatctttggagttgtt |
21937650 |
T |
|
| Q |
202 |
caataagaagacattc |
217 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
21937651 |
caataagaaggcattc |
21937666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 432 - 673
Target Start/End: Original strand, 22053446 - 22053687
Alignment:
| Q |
432 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaaggttgtatagttcctacaaatatattgattcggcaatggatggc |
531 |
Q |
| |
|
|||||||| ||||| ||||| ||||||| ||||||||||||||| ||||||| |||| || | |||| | |||| | ||||||| |||||||| || |
|
|
| T |
22053446 |
atgatttgccttactatctcgagtcatgcttgttgtattttggagtatatccagaagattatgaagttaattcaaagcgagtgattcgacaatggatagc |
22053545 |
T |
|
| Q |
532 |
tgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttca |
631 |
Q |
| |
|
||||| || ||||| || || | | || || |||||||| || ||||| ||||||||| |||| |||||| |||| | |||| |||||| |||| |
|
|
| T |
22053546 |
agaagggtttgtgaaggaggaaaaggggaagactttggaagaagtggcagaaggatatttatcagagttgatccatagaagcctggttcaagtatcttca |
22053645 |
T |
|
| Q |
632 |
attagtattgatggaagagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
|||| |||||||| | ||| ||| | ||| ||||||||||| |
|
|
| T |
22053646 |
cttagaattgatggcaaagctaaaggatgtcgtgttcatgat |
22053687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 22187424 - 22187501
Alignment:
| Q |
140 |
tcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaagacattc |
217 |
Q |
| |
|
||||||||| |||| ||| |||||||| || ||| || ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22187424 |
tcttcttttattgaggtgcatgaactgcaacctttatctctagaacaatctttggagttgttcaataagaaggcattc |
22187501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 432 - 488
Target Start/End: Original strand, 22028740 - 22028796
Alignment:
| Q |
432 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
488 |
Q |
| |
|
|||||||| ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22028740 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22028796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 432 - 488
Target Start/End: Original strand, 22035257 - 22035313
Alignment:
| Q |
432 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
488 |
Q |
| |
|
|||||||| ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22035257 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22035313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 432 - 488
Target Start/End: Original strand, 22105448 - 22105504
Alignment:
| Q |
432 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
488 |
Q |
| |
|
|||||||| ||||| ||||||||||||| |||||||| |||||| ||||||| |||| |
|
|
| T |
22105448 |
atgatttgccttactatctcaagtcatgcttgttgtactttggagtatatccagaag |
22105504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 432 - 488
Target Start/End: Original strand, 22187728 - 22187784
Alignment:
| Q |
432 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
488 |
Q |
| |
|
|||||||| ||||| |||||||| |||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22187728 |
atgatttgccttactatctcaagccatgcttgttgtattttggagtatatccagaag |
22187784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 22028436 - 22028506
Alignment:
| Q |
140 |
tcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgttcaataagaa |
210 |
Q |
| |
|
||||||||| |||| ||| |||||||| || ||| || |||||||||||||||||||||||||||||| |
|
|
| T |
22028436 |
tcttcttttattgaggtgcatgaactgcaacctttatctctagaacaatctttggagttgttcaataagaa |
22028506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 511 - 597
Target Start/End: Complemental strand, 22628182 - 22628096
Alignment:
| Q |
511 |
attgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacaga |
597 |
Q |
| |
|
||||||||| |||| ||| ||||||||||| |||||||| || || | |||||| || ||||| || |||| |||||||||||||| |
|
|
| T |
22628182 |
attgattcgacaattgatagctgaaggatttgtgaaagaagaaaggggaaaaactttcgaagaagtcacagaaggatatttaacaga |
22628096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 22179781 - 22179834
Alignment:
| Q |
68 |
attgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtt |
121 |
Q |
| |
|
||||||| |||||| || ||||||||||||| |||||||| |||||||||||| |
|
|
| T |
22179781 |
attgatagtaaaaatggaagtaagatattaataacaacaaggaacatggatgtt |
22179834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 432 - 488
Target Start/End: Original strand, 21931161 - 21931217
Alignment:
| Q |
432 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattatatcctgaag |
488 |
Q |
| |
|
|||||||| ||||| |||||||| |||| || |||||||||||| ||||||| |||| |
|
|
| T |
21931161 |
atgatttgccttactatctcaagccatgcttcttgtattttggagtatatccagaag |
21931217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 432 - 480
Target Start/End: Complemental strand, 22614997 - 22614949
Alignment:
| Q |
432 |
atgatttgtcttacaatctcaagtcatgtttgttgtattttggattata |
480 |
Q |
| |
|
|||||||| ||||| |||| | |||||||||||||||||||||||||| |
|
|
| T |
22614997 |
atgatttgccttactatcttagatcatgtttgttgtattttggattata |
22614949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 45; Significance: 3e-16; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 513 - 673
Target Start/End: Complemental strand, 2305131 - 2304971
Alignment:
| Q |
513 |
tgattcggcaatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagagg |
612 |
Q |
| |
|
||||||| || ||||| |||||||| || ||||| || || || | || || |||||||| |||||||| ||||||||| |||| ||||| || || | |
|
|
| T |
2305131 |
tgattcgacagtggatagctgaagggtttgtgaaggaggaaagtgggaagactttggaagaagttgcagaaggatatttatcagagttgattcgtcgaag |
2305032 |
T |
|
| Q |
613 |
tttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
||||||||||||| ||| |||| |||||||||| | | ||||||||||||||||||||| |
|
|
| T |
2305031 |
tttggtgcaagtatcctcagttagcattgatggaaaatctaaaagttgttgtgttcatgat |
2304971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 521 - 673
Target Start/End: Original strand, 34990046 - 34990198
Alignment:
| Q |
521 |
caatggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgc |
620 |
Q |
| |
|
|||||||| |||||||| || |||||||| || || | || || |||||||| |||| ||| ||||||||||||| ||||| ||||| ||||||||| |
|
|
| T |
34990046 |
caatggatagctgaagggtttgtgaaagaggaaagtgggaagactttggaagaagttgaagaaagatatttaacagagttgattcgtagaagtttggtgc |
34990145 |
T |
|
| Q |
621 |
aagtagtttcaattagtattgatggaagagcaaaaagttgttgtgttcatgat |
673 |
Q |
| |
|
||||| ||| |||| |||||||||| | | | ||||||||||||||||||| |
|
|
| T |
34990146 |
aagtatcctcagttagcattgatggaaaaactagaagttgttgtgttcatgat |
34990198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 2305653 - 2305490
Alignment:
| Q |
2 |
aggtatgttatagtttttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatca |
101 |
Q |
| |
|
||||||||| | || |||||| | ||||||||| | |||||||||||| || ||| |||||||| |||| ||||||| ||| |||||||||| || | |
|
|
| T |
2305653 |
aggtatgtttttgtgtttgataatgtatggaacacaagtttttgggatgagattgaatatgctatgagtgatcataaaaatggtagtaagatatttatta |
2305554 |
T |
|
| Q |
102 |
caacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaact |
165 |
Q |
| |
|
| |||||||| ||||||||| | | ||||||||||||||||||| || ||||| ||||||| |
|
|
| T |
2305553 |
ccacaagaaatatggatgttgccatatattgtaagaaatcttcttttattcaagtgcatgaact |
2305490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 2 - 216
Target Start/End: Original strand, 34989515 - 34989729
Alignment:
| Q |
2 |
aggtatgttatagtttttgatgacgtatggaacttacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatca |
101 |
Q |
| |
|
||||||||| | || |||||||| ||||||||| | |||||||||||| || ||| || | ||| |||||||||||| ||| |||||||||| || | |
|
|
| T |
34989515 |
aggtatgtttttgtgtttgatgatgtatggaacacaagtttttgggatgagattgaatatgttgtgagtgataataaaaatggtagtaagatatttatta |
34989614 |
T |
|
| Q |
102 |
caacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttggctgaagaacaatctttggagttgtt |
201 |
Q |
| |
|
| |||||||| | ||||||| | | ||||||||||||||| ||| |||||||| ||||||| || || ||||||||||||| | || ||||| |
|
|
| T |
34989615 |
ccacaagaaataaggatgttgccatgtattgtaagaaatcttcatttattgaagtgcatgaactacaaccattaactgaagaacaatcaattgatttgtt |
34989714 |
T |
|
| Q |
202 |
caataagaagacatt |
216 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
34989715 |
caataagaaggcatt |
34989729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 566 - 673
Target Start/End: Original strand, 34976245 - 34976352
Alignment:
| Q |
566 |
ttggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtg |
665 |
Q |
| |
|
|||||||| |||||| | |||||||||||||| ||||| || || |||||||||||||| ||| |||| |||||||||| | ||||||||||||| |
|
|
| T |
34976245 |
ttggaagaagttgcaaaaggatatttaacagagttgattcgtcgaagtttggtgcaagtatcctcagttagaattgatggaaagcctaaaagttgttgtg |
34976344 |
T |
|
| Q |
666 |
ttcatgat |
673 |
Q |
| |
|
|||||||| |
|
|
| T |
34976345 |
ttcatgat |
34976352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 566 - 673
Target Start/End: Original strand, 34983356 - 34983463
Alignment:
| Q |
566 |
ttggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaagtagtttcaattagtattgatggaagagcaaaaagttgttgtg |
665 |
Q |
| |
|
|||||||| |||||| | |||||||||||||| ||||| || || |||||||||||||| ||| |||| |||||||||| | ||||||||||||| |
|
|
| T |
34983356 |
ttggaagaagttgcaaaaggatatttaacagagttgattcgtcgaagtttggtgcaagtatcctcagttagaattgatggaaagcctaaaagttgttgtg |
34983455 |
T |
|
| Q |
666 |
ttcatgat |
673 |
Q |
| |
|
|||||||| |
|
|
| T |
34983456 |
ttcatgat |
34983463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1439 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1439
Description:
Target: scaffold1439; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 216
Target Start/End: Complemental strand, 1686 - 1547
Alignment:
| Q |
77 |
aaaaagggttgtaagatattaatcacaacaagaaacatggatgtttcaaatgcttgtaagaaatcttcttttgttgaagtgtatgaactgaaaggtttgg |
176 |
Q |
| |
|
||||| ||| |||||||||| || || |||||||| ||||||||| | ||||||||||||||||||| |||||||| ||||||| || ||| |
|
|
| T |
1686 |
aaaaatggtagtaagatatttattaccacaagaaatatggatgttgctgtgtattgtaagaaatcttcttttattgaagtgcatgaactacaacctttaa |
1587 |
T |
|
| Q |
177 |
ctgaagaacaatctttggagttgttcaataagaagacatt |
216 |
Q |
| |
|
|||||||| |||| || || ||||| ||||||||| |||| |
|
|
| T |
1586 |
ctgaagaaaaatcatttgatttgtttaataagaaggcatt |
1547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 872859 - 872774
Alignment:
| Q |
36 |
tacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtt |
121 |
Q |
| |
|
|||||||| ||||||||| |||||| | | ||||||||||||||||| |||||||||| |||||| ||| |||||| ||||| |
|
|
| T |
872859 |
tacattttatggatgatattgaatttgttgtaattgataataaaaagggaagtaagatatttatcacagcaatgaacatgaatgtt |
872774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 1234136 - 1234051
Alignment:
| Q |
36 |
tacatttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatattaatcacaacaagaaacatggatgtt |
121 |
Q |
| |
|
|||||||| ||||||||| |||||| | | ||||||||||||||||| |||||||||| |||||| ||| |||||| ||||| |
|
|
| T |
1234136 |
tacattttatggatgatattgaatttgttgtaattgataataaaaagggaagtaagatatttatcacagcaatgaacatgaatgtt |
1234051 |
T |
|
Back To:
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Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 524 - 669
Target Start/End: Original strand, 40580766 - 40580911
Alignment:
| Q |
524 |
tggatggctgaaggattcgtgaaagatgatagcgtaaaaacattggaagatgttgcagatggatatttaacagatttgatcagtagaggtttggtgcaag |
623 |
Q |
| |
|
||||| |||||||| || ||||| || || || | ||| || |||||||| ||||| || | ||||||||| || ||||| || | |||||||||||| |
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|
| T |
40580766 |
tggatagctgaagggtttgtgaaggaggaaagtggaaagactttggaagaagttgctgaagtatatttaactgagttgattcgtcgtagtttggtgcaag |
40580865 |
T |
|
| Q |
624 |
tagtttcaattagtattgatggaagagcaaaaagttgttgtgttca |
669 |
Q |
| |
|
|| |||||||| |||||||||| | | |||||||||| |||||| |
|
|
| T |
40580866 |
tatcctcaattagaattgatggaaaaactaaaagttgttttgttca |
40580911 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 40580264 - 40580320
Alignment:
| Q |
40 |
tttttgggatgatatcaaatttgctatgattgataataaaaagggttgtaagatatt |
96 |
Q |
| |
|
|||||||| |||||| ||| |||||||| |||||||||||| ||| |||||||||| |
|
|
| T |
40580264 |
tttttggggtgatattgaatatgctatgagtgataataaaaatggtagtaagatatt |
40580320 |
T |
|
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Target: chr4 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 29604842 - 29604805
Alignment:
| Q |
17 |
tttgatgacgtatggaacttacatttttgggatgatat |
54 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
29604842 |
tttgacgatgtatggaacttacatttttgggatgatat |
29604805 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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