View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2761_low_20 (Length: 351)

Name: NF2761_low_20
Description: NF2761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2761_low_20
NF2761_low_20
[»] chr4 (12 HSPs)
chr4 (238-351)||(6373379-6373492)
chr4 (140-242)||(6373255-6373357)
chr4 (1-111)||(11241578-11241688)
chr4 (1-95)||(3930368-3930462)
chr4 (1-95)||(16555705-16555799)
chr4 (1-104)||(5206147-5206250)
chr4 (1-95)||(13198676-13198770)
chr4 (1-95)||(22681652-22681745)
chr4 (1-98)||(35393545-35393642)
chr4 (2-73)||(8488278-8488349)
chr4 (1-79)||(27304905-27304983)
chr4 (1-47)||(49178636-49178682)
[»] chr1 (14 HSPs)
chr1 (1-111)||(8108910-8109020)
chr1 (1-98)||(17518492-17518588)
chr1 (1-95)||(41082980-41083074)
chr1 (1-95)||(47955378-47955472)
chr1 (1-95)||(22149590-22149683)
chr1 (60-111)||(48190798-48190848)
chr1 (76-113)||(24671281-24671318)
chr1 (82-110)||(4692431-4692459)
chr1 (82-110)||(6703892-6703920)
chr1 (82-110)||(9347549-9347577)
chr1 (82-110)||(32162757-32162785)
chr1 (59-107)||(39690825-39690872)
chr1 (82-110)||(46824276-46824304)
chr1 (60-111)||(48191333-48191382)
[»] scaffold0802 (1 HSPs)
scaffold0802 (1-95)||(1308-1402)
[»] scaffold0319 (1 HSPs)
scaffold0319 (1-95)||(6585-6679)
[»] chr8 (16 HSPs)
chr8 (1-95)||(15156073-15156167)
chr8 (1-95)||(37752186-37752280)
chr8 (1-95)||(43245943-43246037)
chr8 (1-95)||(12281196-12281290)
chr8 (1-95)||(41662291-41662385)
chr8 (15-95)||(765806-765886)
chr8 (1-97)||(43162425-43162521)
chr8 (15-94)||(16929013-16929091)
chr8 (4-95)||(34313955-34314046)
chr8 (15-95)||(74887-74967)
chr8 (1-79)||(18019875-18019953)
chr8 (5-102)||(7127843-7127940)
chr8 (1-64)||(9465675-9465738)
chr8 (27-79)||(37670169-37670221)
chr8 (23-63)||(33748196-33748236)
chr8 (1-65)||(43597892-43597956)
[»] chr6 (8 HSPs)
chr6 (1-95)||(3403877-3403971)
chr6 (1-95)||(18242044-18242138)
chr6 (1-95)||(30388252-30388346)
chr6 (1-95)||(2762555-2762649)
chr6 (2-95)||(13579541-13579634)
chr6 (1-64)||(10039855-10039918)
chr6 (1-64)||(11656583-11656646)
chr6 (3-49)||(33972203-33972249)
[»] chr5 (9 HSPs)
chr5 (1-95)||(18433087-18433181)
chr5 (1-95)||(25115829-25115923)
chr5 (1-95)||(25174921-25175015)
chr5 (1-95)||(34576937-34577031)
chr5 (26-111)||(22429138-22429223)
chr5 (1-115)||(5187574-5187688)
chr5 (1-111)||(9665582-9665692)
chr5 (1-95)||(26020522-26020616)
chr5 (1-95)||(5779750-5779844)
[»] chr2 (11 HSPs)
chr2 (1-98)||(6171345-6171442)
chr2 (1-98)||(11883692-11883789)
chr2 (1-95)||(20347352-20347446)
chr2 (1-95)||(30190995-30191089)
chr2 (1-95)||(32673031-32673125)
chr2 (1-95)||(40469617-40469711)
chr2 (1-95)||(26737668-26737763)
chr2 (1-69)||(15920923-15920991)
chr2 (1-95)||(17345803-17345897)
chr2 (1-64)||(40221500-40221563)
chr2 (60-111)||(18296670-18296720)
[»] scaffold1221 (1 HSPs)
scaffold1221 (1-111)||(1537-1647)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-95)||(25257-25351)
[»] chr3 (7 HSPs)
chr3 (1-95)||(18874961-18875055)
chr3 (1-95)||(20968908-20969002)
chr3 (1-95)||(10293680-10293773)
chr3 (1-95)||(9026805-9026898)
chr3 (24-64)||(3644755-3644795)
chr3 (59-139)||(21895657-21895736)
chr3 (82-110)||(47666333-47666361)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-95)||(45695-45789)
[»] chr7 (10 HSPs)
chr7 (1-95)||(3687545-3687639)
chr7 (1-95)||(9412213-9412307)
chr7 (1-104)||(35080140-35080243)
chr7 (1-115)||(6908402-6908515)
chr7 (15-104)||(5349664-5349753)
chr7 (1-79)||(13772803-13772881)
chr7 (3-79)||(15567179-15567255)
chr7 (15-95)||(34235881-34235961)
chr7 (2-79)||(33628466-33628543)
chr7 (52-95)||(29291982-29292025)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-95)||(411993-412087)
[»] scaffold0598 (1 HSPs)
scaffold0598 (6-88)||(6768-6850)
[»] scaffold0001 (1 HSPs)
scaffold0001 (2-64)||(439001-439063)
[»] scaffold0015 (1 HSPs)
scaffold0015 (15-95)||(16925-17005)


Alignment Details
Target: chr4 (Bit Score: 114; Significance: 9e-58; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 238 - 351
Target Start/End: Original strand, 6373379 - 6373492
Alignment:
238 caagaacaaatatgtttaacaaataatgttagtcactctttccaaagaaaaacatctataaaaatgaaattatatatccaaaacaagtataagcagatca 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
6373379 caagaacaaatatgtttaacaaataatgttagtcactctttccaaagaaaaacatctataaaaatgaaattatatatccaaaacaagtataagcagatca 6373478  T
338 aggcaagaacaaat 351  Q
    ||||||||||||||    
6373479 aggcaagaacaaat 6373492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 6373255 - 6373357
Alignment:
140 aagattaaattatagaaggattaaaattaggtttagattaaattgaaatttagctttaagaaactaaaacacacttaattttctttaattttcatcatca 239  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
6373255 aagattaaattgtagaaggattaaaattaggtttagattaaattgaaatttagctttaagaaaccaaaacacacttaattttctttaattttcatcatca 6373354  T
240 aga 242  Q
    |||    
6373355 aga 6373357  T

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Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 11241578 - 11241688
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcac 100  Q
    ||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||    
11241578 cgcacaattagcaaaaagataaggggcaaaagtgaaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcccac 11241677  T
101 aattggcaaaa 111  Q
    |||||||||||    
11241678 aattggcaaaa 11241688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3930368 - 3930462
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
3930368 cgcacaattagcaaaaagataagggacaaaagtgcaattggacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 3930462  T

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Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 16555705 - 16555799
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
16555705 cgcacaattagcaaaaagataagggggaaaagtgcaattgaacacaaagatggggtgtaaaatcagaaagggggcaaaaagatggggtgcaaaat 16555799  T

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Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 5206147 - 5206250
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcac 100  Q
    ||||||||||||  ||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
5206147 cgcacaattagcaaaaagatagggggaagaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatagggtgcaaaatcgcac 5206246  T
101 aatt 104  Q
    ||||    
5206247 aatt 5206250  T

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Target: chr4; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 13198770 - 13198676
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    |||||||||||   ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
13198770 cgcacaattagaaaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 13198676  T

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Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 22681745 - 22681652
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||    
22681745 cgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatggggtgcaaaattagaaa-ggggcaaaaagatggggtgcaaaat 22681652  T

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Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 35393642 - 35393545
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgc 98  Q
    ||||||||||||  ||||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||||| |||| ||||||||||||||||||    
35393642 cgcacaattagcaaaaagatagggggcaaaagttcaattgaacacaaagatagggtgcaaaatcaaaaagggggtaaaaagatggggtgcaaaattgc 35393545  T

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Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 8488349 - 8488278
Alignment:
2 gcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggg 73  Q
    |||||||||||  ||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
8488349 gcacaattagcaaaaacatagggggcaaaagtgcaattgaacacaaagacggggtgcaaaatcagaaagggg 8488278  T

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Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 27304905 - 27304983
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaa 79  Q
    ||||||||||||  ||||||| |||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||    
27304905 cgcacaattagcaaaaagatagggggaaaaagtgcaattgaactcaaatatggggtgcaaaatcagaaaaggggcaaaa 27304983  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 49178682 - 49178636
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaa 47  Q
    ||||||||| ||  ||||||| |||||||||||||||||||||||||    
49178682 cgcacaattggcaaaaagatagggggcaaaagtgcaattgaacacaa 49178636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 8108910 - 8109020
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcac 100  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||    
8108910 cgcacaattagcaaaaagatatggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcaaaaagggggcaaaaagatggggtgcaaaatcgcac 8109009  T
101 aattggcaaaa 111  Q
    |||||||||||    
8109010 aattggcaaaa 8109020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 17518492 - 17518588
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgc 98  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
17518492 cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagat-gggtgcaaaattgc 17518588  T

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Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 41083074 - 41082980
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    |||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
41083074 cgcacaattagtaaaaagataaggggcaaaagtacaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 41082980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 47955472 - 47955378
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
47955472 cgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 47955378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 22149590 - 22149683
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
22149590 cgcacaattagcaaaaagataaggggcaaaagtgcaattaaacacaaagatggggtgcaaaatcagaaa-ggggcaaaaagatggggtgcaaaat 22149683  T

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Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 48190848 - 48190798
Alignment:
60 aaatcagaaagggggcaaaaggatggggtgcaaaattgcacaattggcaaaa 111  Q
    |||| |||||||||| ||||| |||||||||||||| |||||||||||||||    
48190848 aaattagaaagggggaaaaag-atggggtgcaaaatcgcacaattggcaaaa 48190798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 24671318 - 24671281
Alignment:
76 aaaaggatggggtgcaaaattgcacaattggcaaaaaa 113  Q
    |||||||||| ||||||||| |||||||||||||||||    
24671318 aaaaggatggagtgcaaaatcgcacaattggcaaaaaa 24671281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 110
Target Start/End: Original strand, 4692431 - 4692459
Alignment:
82 atggggtgcaaaattgcacaattggcaaa 110  Q
    |||||||||||||||||||||||||||||    
4692431 atggggtgcaaaattgcacaattggcaaa 4692459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 110
Target Start/End: Original strand, 6703892 - 6703920
Alignment:
82 atggggtgcaaaattgcacaattggcaaa 110  Q
    |||||||||||||||||||||||||||||    
6703892 atggggtgcaaaattgcacaattggcaaa 6703920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 110
Target Start/End: Original strand, 9347549 - 9347577
Alignment:
82 atggggtgcaaaattgcacaattggcaaa 110  Q
    |||||||||||||||||||||||||||||    
9347549 atggggtgcaaaattgcacaattggcaaa 9347577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 110
Target Start/End: Complemental strand, 32162785 - 32162757
Alignment:
82 atggggtgcaaaattgcacaattggcaaa 110  Q
    |||||||||||||||||||||||||||||    
32162785 atggggtgcaaaattgcacaattggcaaa 32162757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 39690872 - 39690825
Alignment:
59 aaaatcagaaagggggcaaaaggatggggtgcaaaattgcacaattggc 107  Q
    |||||||||||||| | |||||||| ||||||||||| |||||||||||    
39690872 aaaatcagaaagggag-aaaaggatagggtgcaaaatcgcacaattggc 39690825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 110
Target Start/End: Original strand, 46824276 - 46824304
Alignment:
82 atggggtgcaaaattgcacaattggcaaa 110  Q
    |||||||||||||||||||||||||||||    
46824276 atggggtgcaaaattgcacaattggcaaa 46824304  T

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Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 48191333 - 48191382
Alignment:
60 aaatcagaaagggggcaaaaggatggggtgcaaaattgcacaattggcaaaa 111  Q
    ||||||||||||||| |||  ||||||||||||||| |||| ||||||||||    
48191333 aaatcagaaagggggaaaa--gatggggtgcaaaatcgcaccattggcaaaa 48191382  T

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Target: scaffold0802 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 1308 - 1402
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
1308 cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 1402  T

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Target: scaffold0319 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 6585 - 6679
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
6585 cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 6679  T

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Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 15156073 - 15156167
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
15156073 cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 15156167  T

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Target: chr8; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 37752280 - 37752186
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
37752280 cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 37752186  T

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Target: chr8; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 43246037 - 43245943
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
43246037 cgcacaattagcaaaaagataaggggcaaaagtgtaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 43245943  T

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Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 12281290 - 12281196
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    |||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
12281290 cgcacagttagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatctgaaagggggcaaaaagatggggtgcaaaat 12281196  T

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Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 41662291 - 41662385
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||    
41662291 cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagataaggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 41662385  T

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Target: chr8; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 765886 - 765806
Alignment:
15 aaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
765886 aaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatctgaaagggggcaaaaagatggggtgcaaaat 765806  T

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Target: chr8; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 43162425 - 43162521
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattg 97  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||    
43162425 cgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgaggtgcaaaattg 43162521  T

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Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 16929091 - 16929013
Alignment:
15 aaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaa 94  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
16929091 aaagataaggggcaaaagtgcaatt-aacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaa 16929013  T

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Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 34313955 - 34314046
Alignment:
4 acaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    |||||||||  ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||    
34313955 acaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaaaggggcaaaaagatggggtgcaaaat 34314046  T

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Target: chr8; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 74887 - 74967
Alignment:
15 aaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||| ||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
74887 aaagataggggacaaaagtgcaattaaacacaaagatgtggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 74967  T

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Target: chr8; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18019953 - 18019875
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaa 79  Q
    |||||||||||   ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
18019953 cgcacaattaggaaaaagatagggggcaaaagtgcaattgaacacaaagatgcggtgcaaaatcagaaagggggcaaaa 18019875  T

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Target: chr8; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 7127843 - 7127940
Alignment:
5 caattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcacaa 102  Q
    ||||||||  ||||||| |||| ||||||||||||||||||||| ||||| |||||||||||||| |||| |||| ||| ||||||||||| ||||||    
7127843 caattagcaaaaagatagggggtaaaagtgcaattgaacacaaaaatgggatgcaaaatcagaaaaggggtaaaaagatagggtgcaaaatcgcacaa 7127940  T

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Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9465738 - 9465675
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc 64  Q
    |||||| |||||  ||||||| ||||||||||||||||||||||||||||| ||||||||||||    
9465738 cgcacagttagcaaaaagatagggggcaaaagtgcaattgaacacaaagatagggtgcaaaatc 9465675  T

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Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 37670169 - 37670221
Alignment:
27 caaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaa 79  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||||||||||||    
37670169 caaaaatgcaattaaacacaaagatggggtgctaaatcagaaagggggcaaaa 37670221  T

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Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 33748196 - 33748236
Alignment:
23 ggggcaaaagtgcaattgaacacaaagatggggtgcaaaat 63  Q
    |||||||||||||||||||||||||||||| ||||||||||    
33748196 ggggcaaaagtgcaattgaacacaaagatgaggtgcaaaat 33748236  T

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Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 43597956 - 43597892
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatca 65  Q
    ||||||||||||  ||||||| ||||||||||  ||||||||||||||| || | ||||||||||    
43597956 cgcacaattagcaaaaagatagggggcaaaagcacaattgaacacaaagttgagatgcaaaatca 43597892  T

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Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3403877 - 3403971
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
3403877 cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 3403971  T

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Target: chr6; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 18242044 - 18242138
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
18242044 cgcacaattaacaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 18242138  T

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Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 30388252 - 30388346
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||    
30388252 cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggtaaaaagatggggtgcaaaat 30388346  T

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Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 2762649 - 2762555
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||    
2762649 cgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcaaaaagggggcaaaaagatgaggtgcaaaat 2762555  T

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Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 13579541 - 13579634
Alignment:
2 gcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    |||||||||||  ||| ||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||  ||||||||||||||    
13579541 gcacaattagcaaaaatatagggggcaaaagtgcaattgaacacaaatatggggtgcaaaataagaaaggggccaaaaaaatggggtgcaaaat 13579634  T

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Target: chr6; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10039855 - 10039918
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc 64  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||    
10039855 cgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc 10039918  T

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Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 11656646 - 11656583
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc 64  Q
    |||||||||| |  || |||| ||||||||||||||||||||||||||||||||||||||||||    
11656646 cgcacaattatcaaaacgatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc 11656583  T

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Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 33972203 - 33972249
Alignment:
3 cacaattagctgaaagataaggggcaaaagtgcaattgaacacaaag 49  Q
    ||||||||||  ||||||| |||||||||||||||||||||||||||    
33972203 cacaattagcaaaaagatatggggcaaaagtgcaattgaacacaaag 33972249  T

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Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 18433181 - 18433087
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
18433181 cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 18433087  T

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Target: chr5; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25115923 - 25115829
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
25115923 cgcacaattagcaaaatgataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 25115829  T

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Target: chr5; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25175015 - 25174921
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
25175015 cgcacaattagcaaaatgataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 25174921  T

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Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 34577031 - 34576937
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
34577031 cgcacaattagcaaaaagataaggggcaaaagtgcaattaaacacaaagatggggtggaaaatcagaaagggggcaaaaagatggggtgcaaaat 34576937  T

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Target: chr5; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 22429138 - 22429223
Alignment:
26 gcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcacaattggcaaaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||    
22429138 gcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgcacaattagcaaaa 22429223  T

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Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 5187688 - 5187574
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcac 100  Q
    |||| |||||||  ||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||| ||||    
5187688 cgcataattagcaaaaagataggggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaaggggacaaaaagatggggtgcaaaatcgcac 5187589  T
101 aattggcaaaaaata 115  Q
     ||| ||||||||||    
5187588 gattagcaaaaaata 5187574  T

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Target: chr5; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 9665692 - 9665582
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcac 100  Q
    ||||||||||||  ||||||| |||||||||   |||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||    
9665692 cgcacaattagcaaaaagatagggggcaaaaacacaattgaacacaaagatgaggtgcaaaatcagaaagggagcaaaaagatggggtgcaaaattgcac 9665593  T
101 aattggcaaaa 111  Q
    |||| ||||||    
9665592 aattagcaaaa 9665582  T

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Target: chr5; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 26020616 - 26020522
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    |||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
26020616 cgcacaattaacaaaaagataagggacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatgcggtgcaaaat 26020522  T

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Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 5779750 - 5779844
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||| | | |||||||||||||||||||||| ||| | ||||||||||||||| ||  |||| |||||  ||||||||    
5779750 cgcacaattagcaaaaagataggagacaaaagtgcaattgaacacaaaaatgagatgcaaaatcagaaagaggaaaaaaagatggaatgcaaaat 5779844  T

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Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 6171345 - 6171442
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgc 98  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
6171345 cgcacaattaacaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaattgc 6171442  T

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Target: chr2; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11883789 - 11883692
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgc 98  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||    
11883789 cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcataaagggggcaaaaagatgaggtgcaaaattgc 11883692  T

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Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 20347352 - 20347446
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
20347352 cgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatggggtgcaaaat 20347446  T

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Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 30191089 - 30190995
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
30191089 cgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 30190995  T

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Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 32673031 - 32673125
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||    
32673031 cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagagggcgaaaagatggggtgcaaaat 32673125  T

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Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 40469617 - 40469711
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
40469617 cgcacaattagcaaaacgataagggggaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 40469711  T

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Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 26737668 - 26737763
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaatt-gaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
26737668 cgcacaattagcaaaaagatagggggcaaaagtgcaatttgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgtaaaat 26737763  T

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Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 15920923 - 15920991
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaa 69  Q
    ||||||||||||  |||| || |||||||||||||||||||||||||||||||||||||||||||||||    
15920923 cgcacaattagcaaaaagttagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaa 15920991  T

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Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 17345897 - 17345803
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    |||||||||| |  ||| ||| ||||||||||||||||||||||||||||||| ||||||||||| || |||| ||||| ||| |||||||||||    
17345897 cgcacaattaacaaaaatatagggggcaaaagtgcaattgaacacaaagatggagtgcaaaatcaaaagggggccaaaaagatagggtgcaaaat 17345803  T

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Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 40221500 - 40221563
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc 64  Q
    ||||||||||||  ||||||| |||||||||| |||||||||||||||||||||||||||||||    
40221500 cgcacaattagcaaaaagatagggggcaaaagcgcaattgaacacaaagatggggtgcaaaatc 40221563  T

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Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 18296670 - 18296720
Alignment:
60 aaatcagaaagggggcaaaaggatggggtgcaaaattgcacaattggcaaaa 111  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||||||||    
18296670 aaatcagaaagggggaaaaag-atggggtgcaaaatcgcacaattggcaaaa 18296720  T

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Target: scaffold1221 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 1647 - 1537
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcac 100  Q
    ||||||||||||  ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||  |||    
1647 cgcacaattagcaaaaagataagagacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaataagatggggtgcaaaatcacac 1548  T
101 aattggcaaaa 111  Q
    |||||||||||    
1547 aattggcaaaa 1537  T

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Target: scaffold0192 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 25257 - 25351
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
25257 cgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaatggggcaaaaagatggggtgcaaaat 25351  T

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Target: chr3 (Bit Score: 79; Significance: 7e-37; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 18875055 - 18874961
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
18875055 cgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 18874961  T

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Target: chr3; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 20968908 - 20969002
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
20968908 cgcacaattagcaaaatgataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 20969002  T

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Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 10293773 - 10293680
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
10293773 cgcacaattaacaaaaagataaggggcaaaagtgcaattgaacacaaagat-gggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 10293680  T

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Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9026898 - 9026805
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||| |||| |||||||||||||||    
9026898 cgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagacggggggcaaaatcagaaaggggg-aaaaagatggggtgcaaaat 9026805  T

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Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 3644755 - 3644795
Alignment:
24 gggcaaaagtgcaattgaacacaaagatggggtgcaaaatc 64  Q
    |||||||||||||||| ||||||||||||||||||||||||    
3644755 gggcaaaagtgcaattaaacacaaagatggggtgcaaaatc 3644795  T

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Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 21895736 - 21895657
Alignment:
59 aaaatcagaaagggggcaaaaggatggggtgcaaaattgcacaattggcaaaaaatannnnnnnaaaagtgcaattaagcc 139  Q
    |||||||||||||||  ||||| ||||||||||||||  |||||||||||||| |||       |||||||||||||||||    
21895736 aaaatcagaaaggggaaaaaag-atggggtgcaaaatcacacaattggcaaaacatagtggggaaaaagtgcaattaagcc 21895657  T

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Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 110
Target Start/End: Original strand, 47666333 - 47666361
Alignment:
82 atggggtgcaaaattgcacaattggcaaa 110  Q
    |||||||||||||||||||||||||||||    
47666333 atggggtgcaaaattgcacaattggcaaa 47666361  T

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Target: scaffold0110 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 45695 - 45789
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
45695 cgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 45789  T

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Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3687545 - 3687639
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
3687545 cgcacaattagcaaaaaaataagggacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaat 3687639  T

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Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 9412213 - 9412307
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    |||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
9412213 cgcacagttagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatctgaaagggggcaaaaagatggggtgcaaaat 9412307  T

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Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 35080140 - 35080243
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcac 100  Q
    ||||||||||||| ||||||| ||||||||||  |||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||| ||||    
35080140 cgcacaattagcttaaagatagggggcaaaagcacaattgaacacaaagatgaggtgcaaaatcagaaaggaggcaaaaagatggggtgcaaaatcgcac 35080239  T
101 aatt 104  Q
    ||||    
35080240 aatt 35080243  T

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Target: chr7; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 6908402 - 6908515
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcac 100  Q
    ||||||||||||  ||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| ||||    
6908402 cgcacaattagcaaaaagatagggggtaaaagcgcaattgaacacaaagatggggtgcaaaatcagaaaggaggcaaaaagat-gggtgcaaaatcgcac 6908500  T
101 aattggcaaaaaata 115  Q
    |||| ||||||||||    
6908501 aattagcaaaaaata 6908515  T

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Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 5349664 - 5349753
Alignment:
15 aaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaattgcacaatt 104  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||    
5349664 aaagatagggggcaaaagtgcaattgaatacaaagatggggtgcaaaatcagaaagggggtaaaaagatggggtgcaaaatcgcacaatt 5349753  T

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Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13772803 - 13772881
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaa 79  Q
    ||||||||||||  |||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||| ||||||    
13772803 cgcacaattagcaaaaagataaggggcaaaagtgtaattgaacacaaagatggggtgaaaaattagaaagggtgcaaaa 13772881  T

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Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 15567179 - 15567255
Alignment:
3 cacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaa 79  Q
    ||||||||||  ||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
15567179 cacaattagcaaaaagagagggggcaaacgtgcaattgaacacaaagatggggtgcaaaatcagaaagggtgcaaaa 15567255  T

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Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 34235881 - 34235961
Alignment:
15 aaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| || || |||||||||    
34235881 aaagatagggggcaaaagtgcaattaaacacaaagatggggtgcagaatcagaaatggggcaaaaagacggcgtgcaaaat 34235961  T

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Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 33628543 - 33628466
Alignment:
2 gcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaa 79  Q
    |||||||||||  ||||||| || ||||| |||||||||||||||| |||||||||||||||||||||||| ||||||    
33628543 gcacaattagcaaaaagatagggtgcaaatgtgcaattgaacacaaggatggggtgcaaaatcagaaagggtgcaaaa 33628466  T

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Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 29291982 - 29292025
Alignment:
52 ggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||    
29291982 ggggtgcaaaatcagaaatggggcaaaaagatagggtgcaaaat 29292025  T

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Target: scaffold0002 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 412087 - 411993
Alignment:
1 cgcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||    
412087 cgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatagggtgcaaaatcagaaagggggcaaaaagatagggtgcaaaat 411993  T

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Target: scaffold0598 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 6768 - 6850
Alignment:
6 aattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggt 88  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
6768 aattagcaaaaaaataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggagcaaaaagatggggt 6850  T

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Target: scaffold0001 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 439063 - 439001
Alignment:
2 gcacaattagctgaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc 64  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
439063 gcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc 439001  T

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Target: scaffold0015 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 17005 - 16925
Alignment:
15 aaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggggtgcaaaat 95  Q
    ||||||| ||| |||||||||||||||||| ||||| || |||||||||||||||||| | |||| |||||||||||||||    
17005 aaagataggggacaaaagtgcaattgaacaaaaagacggagtgcaaaatcagaaagggaggaaaaagatggggtgcaaaat 16925  T

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