View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2761_low_26 (Length: 312)
Name: NF2761_low_26
Description: NF2761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2761_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 16440725 - 16441019
Alignment:
| Q |
1 |
tttatatatgttttgtgttttgatgatagatgtttcattgcacttcatctttccctgatatgtttcaatgccacatggaactatgggtcatatttagata |
100 |
Q |
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| T |
16440725 |
tttatatatgtt--gtgttttgatgatagatgtttcattgcacttcatctttccctgatatgtttcaatgccacatggaactatgggtcatatttagata |
16440822 |
T |
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| Q |
101 |
ttctaccgaaacaaattagtattctattaattaactaccaattcaatccccaaaaaacccaagtgaaatcacaaccgaaattatgtaacgtttatgccca |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
16440823 |
ttctactgaaacaaattagtattctattaattaactaccaattcaatccccaaaaaacccaagtgaaatcacaacccaaattatgtaacgtttatgccca |
16440922 |
T |
|
| Q |
201 |
taatgcattttgctccctaactagtatgcctcaattgaaacctcaaagtcttaatacaacatcaaactattcacagcttcagctccttccctgaggc |
297 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
16440923 |
taatgcattttgctccctagctagtatgcctcaattgaaacctcaaagtcttaatacaacatcaaactattcacagcttcagctccttctctgaggc |
16441019 |
T |
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