View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2762_low_11 (Length: 339)
Name: NF2762_low_11
Description: NF2762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2762_low_11 |
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Alignment Details
Target: chr5 (Bit Score: 168; Significance: 5e-90; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 143 - 331
Target Start/End: Original strand, 26618292 - 26618480
Alignment:
| Q |
143 |
cttatgattggtatgatcagattcacagactcagcaacgtacctcatcagagacagcatctggagtagttataacttcggaaagttcaaatactcaaggg |
242 |
Q |
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| T |
26618292 |
cttatgattggtatgatcagattcacagactcagcaacgtacctcatcagagacagcatctggagtagttataacttcggaaagttcaaatactcaaggg |
26618391 |
T |
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| Q |
243 |
aagaacaacaactaataaatactatatannnnnnnttagtttcaacttgtataatcttcaaattcaatttcatcacattaatattcttc |
331 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26618392 |
aagaacaacaactaataaatactatatacccccccttagtttcaacttgtataatcttcaaattcaatttcatcacattaatattcttc |
26618480 |
T |
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