View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2764_high_5 (Length: 334)
Name: NF2764_high_5
Description: NF2764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2764_high_5 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 18 - 334
Target Start/End: Complemental strand, 13748286 - 13747970
Alignment:
| Q |
18 |
atccatctaagacggggaataatcttggcgttgatcacaaagagcaggaaacaacaccagatgatgaaccggattggcggaaaatgtttctggatggaat |
117 |
Q |
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| T |
13748286 |
atccatctaagacggggaataatcttggagttgatcacaaagagcaggaaacaacaccagatgatgaaccggattggcggaaaatgtttctggatggaat |
13748187 |
T |
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| Q |
118 |
gcaggatagagaaaaagcacttctaaccgagtacactaatactcttcggaattacaaagatgttaagaagaggctcgccgaaatagaggacaaaaatcaa |
217 |
Q |
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| T |
13748186 |
gcaggatagagaaaaagcacttctaaccgagtacactaatactcttcggaattacaaagatgttaagaagaggctcgccgaaatagaggacaaaaatcaa |
13748087 |
T |
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| Q |
218 |
gacaaaaccttggattcttgtttgcaattgcagttaaatgaactgaagacatctaatttcttgaaagatcaagaaataagaattttacatcagaaactta |
317 |
Q |
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| T |
13748086 |
gacaaaaccttggattcttgtttgcaattgcagttaaatgaactgaagacgtctaattacttgaaagatcaagagataagaattttacatcagaaactta |
13747987 |
T |
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| Q |
318 |
gtcttttccagataacc |
334 |
Q |
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| T |
13747986 |
gtcttttgcagataacc |
13747970 |
T |
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