View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2764_low_11 (Length: 236)
Name: NF2764_low_11
Description: NF2764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2764_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4409117 - 4408897
Alignment:
| Q |
1 |
tagcttttttagcaaaatttaaaacaagttggtaacttgagtagaaacaagagttacatgatactgtgataaggtaaagaaaatgttgcaaataaagtgc |
100 |
Q |
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| T |
4409117 |
tagcttttttagcaaaatttaaaacaagttggtaacttgagtagaaacaagagttacatgatactgtgataaggtaaagaaaatgttgcaaataaagtgc |
4409018 |
T |
|
| Q |
101 |
aaaaacaaaacattaggaaaatgtatggcgtgtgatgtgaagattttgacactgttatgttgtgttgtgtcatcatggcctatagtaacgtatagggttc |
200 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4409017 |
aaaaacaaaacattaggcaaatgtatggcgtgtgatgtgaagattttgacactgttatgttgtgttgtgtcatcatggcctatagtaacgtatagggttc |
4408918 |
T |
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| Q |
201 |
tatgtaatgaaatattgaagt |
221 |
Q |
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||||||||||||||||||||| |
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| T |
4408917 |
tatgtaatgaaatattgaagt |
4408897 |
T |
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