View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2765_low_1 (Length: 995)

Name: NF2765_low_1
Description: NF2765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2765_low_1
NF2765_low_1
[»] chr6 (21 HSPs)
chr6 (106-408)||(12585251-12585563)
chr6 (421-631)||(29077328-29077538)
chr6 (421-631)||(29112300-29112510)
chr6 (701-879)||(29112580-29112758)
chr6 (701-879)||(29077608-29077786)
chr6 (421-631)||(4641355-4641565)
chr6 (420-631)||(2968138-2968349)
chr6 (702-839)||(4641636-4641773)
chr6 (701-831)||(2968405-2968535)
chr6 (436-631)||(3018346-3018541)
chr6 (421-512)||(29114776-29114867)
chr6 (420-512)||(17950560-17950652)
chr6 (421-512)||(30639611-30639702)
chr6 (420-480)||(3018528-3018588)
chr6 (416-512)||(4646216-4646312)
chr6 (741-823)||(30641057-30641137)
chr6 (421-512)||(35174391-35174482)
chr6 (421-523)||(17952064-17952166)
chr6 (458-540)||(32439096-32439178)
chr6 (477-541)||(14338479-14338543)
chr6 (429-540)||(20523374-20523485)
[»] chr2 (41 HSPs)
chr2 (106-417)||(28633184-28633505)
chr2 (421-631)||(15372499-15372709)
chr2 (421-631)||(41706539-41706749)
chr2 (421-630)||(29909575-29909784)
chr2 (419-630)||(39312-39523)
chr2 (702-831)||(15372780-15372909)
chr2 (701-833)||(39803-39935)
chr2 (421-630)||(37417273-37417482)
chr2 (415-630)||(92262-92476)
chr2 (425-574)||(39560-39709)
chr2 (701-831)||(41706819-41706940)
chr2 (420-630)||(15432327-15432537)
chr2 (705-879)||(42001893-42002066)
chr2 (425-625)||(42879360-42879559)
chr2 (421-510)||(41144-41233)
chr2 (421-512)||(11021533-11021624)
chr2 (723-875)||(15432627-15432779)
chr2 (422-630)||(25619661-25619869)
chr2 (421-512)||(28248175-28248266)
chr2 (728-879)||(37417585-37417736)
chr2 (421-630)||(42001610-42001818)
chr2 (421-512)||(33193-33284)
chr2 (421-512)||(41708430-41708521)
chr2 (744-876)||(29909337-29909469)
chr2 (421-512)||(15373888-15373979)
chr2 (421-512)||(42880811-42880902)
chr2 (701-807)||(25619943-25620049)
chr2 (750-879)||(92019-92148)
chr2 (723-879)||(42879617-42879774)
chr2 (420-512)||(37418769-37418861)
chr2 (701-879)||(39070-39243)
chr2 (431-540)||(16763086-16763195)
chr2 (421-523)||(361445-361547)
chr2 (425-523)||(11023035-11023132)
chr2 (458-540)||(19908271-19908353)
chr2 (431-540)||(14389109-14389218)
chr2 (421-474)||(28246663-28246716)
chr2 (431-540)||(39664773-39664882)
chr2 (461-540)||(40560263-40560342)
chr2 (502-540)||(11315340-11315378)
chr2 (459-540)||(44709770-44709851)
[»] chr4 (45 HSPs)
chr4 (421-631)||(10762581-10762791)
chr4 (421-631)||(10372620-10372830)
chr4 (701-879)||(10762861-10763039)
chr4 (421-631)||(44794674-44794884)
chr4 (421-631)||(47941811-47942021)
chr4 (701-879)||(10372342-10372520)
chr4 (701-876)||(2350180-2350355)
chr4 (701-831)||(44794474-44794604)
chr4 (421-630)||(2350419-2350631)
chr4 (412-630)||(35996054-35996272)
chr4 (701-875)||(35996343-35996517)
chr4 (421-630)||(44558408-44558617)
chr4 (421-630)||(2827407-2827613)
chr4 (419-512)||(10767950-10768043)
chr4 (421-512)||(10371057-10371148)
chr4 (723-824)||(4519670-4519771)
chr4 (421-630)||(27624806-27625015)
chr4 (420-512)||(39923007-39923099)
chr4 (724-834)||(51041644-51041755)
chr4 (421-630)||(4519376-4519585)
chr4 (421-630)||(51041846-51042054)
chr4 (421-512)||(42879275-42879366)
chr4 (429-512)||(44792942-44793025)
chr4 (421-512)||(44992808-44992899)
chr4 (701-858)||(27625070-27625227)
chr4 (416-512)||(39085152-39085248)
chr4 (702-822)||(44558215-44558335)
chr4 (421-512)||(2828411-2828502)
chr4 (421-512)||(35997767-35997858)
chr4 (421-512)||(43778389-43778480)
chr4 (701-879)||(2827683-2827856)
chr4 (421-512)||(47942746-47942837)
chr4 (421-523)||(39083639-39083741)
chr4 (430-512)||(44556629-44556711)
chr4 (431-540)||(41761751-41761860)
chr4 (444-512)||(51040758-51040826)
chr4 (421-523)||(39921494-39921596)
chr4 (422-523)||(39189383-39189484)
chr4 (417-523)||(5484536-5484642)
chr4 (462-512)||(27626728-27626778)
chr4 (421-523)||(42880777-42880879)
chr4 (421-523)||(43779889-43779991)
chr4 (421-494)||(4520469-4520542)
chr4 (421-468)||(5486096-5486143)
chr4 (470-512)||(39190819-39190861)
[»] chr3 (54 HSPs)
chr3 (421-631)||(41020917-41021127)
chr3 (701-879)||(41020669-41020847)
chr3 (409-630)||(23888687-23888908)
chr3 (420-630)||(18430186-18430396)
chr3 (421-630)||(23774152-23774360)
chr3 (421-630)||(45257135-45257344)
chr3 (415-630)||(31887367-31887582)
chr3 (421-630)||(48633877-48634090)
chr3 (421-602)||(40508854-40509035)
chr3 (421-630)||(33113096-33113304)
chr3 (423-630)||(33852585-33852792)
chr3 (421-512)||(40998515-40998606)
chr3 (701-833)||(24382603-24382735)
chr3 (421-565)||(45898328-45898472)
chr3 (421-630)||(24382808-24383017)
chr3 (723-879)||(33112852-33113008)
chr3 (701-879)||(18429943-18430121)
chr3 (421-630)||(2977244-2977453)
chr3 (421-630)||(51454161-51454374)
chr3 (421-512)||(40508493-40508584)
chr3 (726-856)||(33852370-33852500)
chr3 (421-561)||(39641823-39641963)
chr3 (421-512)||(1847645-1847736)
chr3 (421-512)||(33111841-33111932)
chr3 (421-512)||(45897050-45897141)
chr3 (421-512)||(48635373-48635464)
chr3 (729-822)||(23774455-23774548)
chr3 (723-818)||(48634183-48634278)
chr3 (412-512)||(23887189-23887289)
chr3 (420-512)||(33850981-33851073)
chr3 (701-824)||(2977051-2977174)
chr3 (504-630)||(1845867-1845993)
chr3 (726-818)||(45256952-45257043)
chr3 (701-878)||(45898050-45898222)
chr3 (744-833)||(23888491-23888580)
chr3 (431-540)||(27899106-27899215)
chr3 (431-540)||(53190784-53190893)
chr3 (429-497)||(18428757-18428825)
chr3 (421-512)||(2975460-2975551)
chr3 (723-879)||(31887118-31887274)
chr3 (458-540)||(21348760-21348842)
chr3 (435-497)||(24381758-24381820)
chr3 (470-512)||(37865433-37865475)
chr3 (431-540)||(2226177-2226286)
chr3 (431-540)||(30599943-30600052)
chr3 (767-824)||(54093034-54093091)
chr3 (421-512)||(33051465-33051556)
chr3 (421-480)||(41944576-41944635)
chr3 (458-540)||(35905737-35905819)
chr3 (422-512)||(49494477-49494567)
chr3 (767-824)||(26449019-26449076)
chr3 (431-540)||(41977760-41977869)
chr3 (431-540)||(51684620-51684729)
chr3 (431-540)||(54898447-54898556)
[»] chr1 (45 HSPs)
chr1 (421-631)||(47269370-47269580)
chr1 (701-879)||(47269122-47269300)
chr1 (414-631)||(27940601-27940818)
chr1 (415-631)||(36895424-36895640)
chr1 (421-631)||(46638721-46638931)
chr1 (421-630)||(42134482-42134691)
chr1 (421-631)||(31801633-31801843)
chr1 (421-625)||(44157433-44157637)
chr1 (420-630)||(35479891-35480100)
chr1 (702-798)||(27940889-27940985)
chr1 (421-512)||(47264124-47264215)
chr1 (471-630)||(45380899-45381058)
chr1 (421-630)||(33685164-33685372)
chr1 (730-879)||(18183616-18183765)
chr1 (421-630)||(18183859-18184067)
chr1 (421-510)||(35478087-35478176)
chr1 (415-512)||(45379079-45379176)
chr1 (723-876)||(45380652-45380805)
chr1 (416-512)||(31803700-31803796)
chr1 (421-512)||(5784867-5784958)
chr1 (421-512)||(11152545-11152636)
chr1 (419-512)||(27952500-27952593)
chr1 (703-824)||(6575448-6575569)
chr1 (724-879)||(42134782-42134937)
chr1 (500-630)||(6575271-6575399)
chr1 (421-512)||(18180500-18180591)
chr1 (421-512)||(33679259-33679350)
chr1 (422-510)||(6577107-6577195)
chr1 (726-876)||(44158088-44158238)
chr1 (422-512)||(46636766-46636856)
chr1 (744-879)||(31801950-31802085)
chr1 (723-822)||(35479695-35479794)
chr1 (421-512)||(44159294-44159385)
chr1 (744-878)||(46638480-46638614)
chr1 (431-540)||(4855971-4856080)
chr1 (431-540)||(2869589-2869698)
chr1 (415-468)||(5783358-5783411)
chr1 (431-540)||(34778143-34778252)
chr1 (429-490)||(36894830-36894891)
chr1 (458-534)||(31238506-31238582)
chr1 (800-876)||(33682898-33682974)
chr1 (701-833)||(36895229-36895356)
chr1 (420-512)||(42136244-42136336)
chr1 (421-540)||(51121905-51122024)
chr1 (431-525)||(25278973-25279067)
[»] chr7 (46 HSPs)
chr7 (421-631)||(8423195-8423405)
chr7 (411-631)||(35344204-35344423)
chr7 (421-631)||(46996616-46996826)
chr7 (701-831)||(8422995-8423125)
chr7 (701-831)||(35344004-35344134)
chr7 (421-630)||(46812497-46812706)
chr7 (421-630)||(47341597-47341810)
chr7 (421-624)||(23953805-23954008)
chr7 (421-534)||(38613492-38613605)
chr7 (418-630)||(2167476-2167688)
chr7 (406-512)||(35342410-35342516)
chr7 (421-630)||(33038712-33038921)
chr7 (423-512)||(46810707-46810796)
chr7 (701-858)||(46812270-46812427)
chr7 (701-833)||(33038518-33038650)
chr7 (701-822)||(40784626-40784747)
chr7 (421-565)||(38614892-38615035)
chr7 (421-512)||(4321038-4321129)
chr7 (421-512)||(8421416-8421507)
chr7 (421-512)||(30108565-30108656)
chr7 (421-512)||(46994660-46994751)
chr7 (416-630)||(2492322-2492535)
chr7 (701-833)||(2167753-2167885)
chr7 (421-540)||(40784346-40784465)
chr7 (420-630)||(27955369-27955579)
chr7 (701-819)||(47341416-47341534)
chr7 (728-825)||(38613771-38613868)
chr7 (429-512)||(36762680-36762763)
chr7 (421-512)||(45465184-45465275)
chr7 (421-512)||(40785548-40785639)
chr7 (701-823)||(23954085-23954207)
chr7 (422-512)||(36756883-36756973)
chr7 (422-512)||(36766407-36766497)
chr7 (421-510)||(33775408-33775497)
chr7 (744-879)||(46996374-46996512)
chr7 (421-523)||(45463670-45463772)
chr7 (422-512)||(3690151-3690241)
chr7 (739-824)||(27955687-27955771)
chr7 (431-540)||(39859234-39859343)
chr7 (422-474)||(30109737-30109789)
chr7 (429-512)||(33037701-33037785)
chr7 (429-512)||(47339784-47339867)
chr7 (431-510)||(13169683-13169762)
chr7 (471-540)||(6602385-6602454)
chr7 (728-821)||(23168392-23168485)
chr7 (745-822)||(48704494-48704571)
[»] scaffold0477 (1 HSPs)
scaffold0477 (421-631)||(6548-6758)
[»] chr8 (44 HSPs)
chr8 (421-631)||(31201057-31201267)
chr8 (421-630)||(42897689-42897898)
chr8 (421-630)||(1320617-1320826)
chr8 (701-876)||(8654780-8654951)
chr8 (421-630)||(38882712-38882921)
chr8 (411-630)||(8654491-8654708)
chr8 (421-540)||(31821418-31821537)
chr8 (415-630)||(32822355-32822569)
chr8 (701-831)||(31200866-31200987)
chr8 (421-630)||(33160063-33160272)
chr8 (458-631)||(33750298-33750471)
chr8 (421-630)||(37525938-37526147)
chr8 (701-879)||(42897439-42897617)
chr8 (421-612)||(462303-462494)
chr8 (429-512)||(31823476-31823559)
chr8 (421-512)||(32824271-32824362)
chr8 (421-512)||(33748332-33748423)
chr8 (421-520)||(25373614-25373713)
chr8 (421-512)||(31199485-31199576)
chr8 (421-512)||(40019156-40019247)
chr8 (726-823)||(37525749-37525846)
chr8 (436-512)||(24526911-24526987)
chr8 (429-512)||(461184-461267)
chr8 (421-520)||(25707293-25707392)
chr8 (415-495)||(38881422-38881502)
chr8 (444-512)||(42894799-42894867)
chr8 (421-540)||(9184383-9184502)
chr8 (737-823)||(38882517-38882603)
chr8 (701-858)||(32822641-32822798)
chr8 (458-622)||(8609731-8609894)
chr8 (431-540)||(13282488-13282597)
chr8 (427-523)||(28433738-28433834)
chr8 (744-824)||(33750111-33750191)
chr8 (701-804)||(462111-462214)
chr8 (421-512)||(33368759-33368850)
chr8 (421-512)||(44620669-44620760)
chr8 (431-540)||(13108361-13108470)
chr8 (744-833)||(31821725-31821814)
chr8 (728-824)||(9184695-9184791)
chr8 (464-540)||(9673190-9673266)
chr8 (461-540)||(26242339-26242418)
chr8 (470-512)||(1322314-1322356)
chr8 (767-824)||(11721487-11721544)
chr8 (431-540)||(27691164-27691273)
[»] chr5 (34 HSPs)
chr5 (421-630)||(35395333-35395540)
chr5 (421-630)||(18728517-18728726)
chr5 (421-630)||(32087514-32087723)
chr5 (420-630)||(33256399-33256609)
chr5 (421-630)||(43317975-43318184)
chr5 (421-630)||(38178008-38178217)
chr5 (421-630)||(38205232-38205441)
chr5 (421-630)||(35292297-35292505)
chr5 (421-533)||(38596868-38596980)
chr5 (421-512)||(40330515-40330606)
chr5 (701-875)||(35292057-35292231)
chr5 (421-512)||(32089925-32090016)
chr5 (421-510)||(32835876-32835965)
chr5 (421-512)||(42619289-42619380)
chr5 (701-822)||(38177815-38177936)
chr5 (701-822)||(38205039-38205160)
chr5 (429-512)||(33257760-33257843)
chr5 (701-876)||(35395609-35395779)
chr5 (500-630)||(38597024-38597154)
chr5 (701-817)||(32838236-32838352)
chr5 (436-512)||(38176647-38176723)
chr5 (436-512)||(38203871-38203947)
chr5 (744-879)||(32087831-32087966)
chr5 (421-512)||(35291048-35291139)
chr5 (702-875)||(18728278-18728446)
chr5 (431-540)||(17574328-17574437)
chr5 (431-540)||(36057618-36057727)
chr5 (748-833)||(43317785-43317870)
chr5 (421-512)||(18726565-18726656)
chr5 (458-540)||(24496780-24496862)
chr5 (744-824)||(33256716-33256796)
chr5 (458-540)||(2179824-2179906)
chr5 (431-540)||(7267853-7267962)
chr5 (463-540)||(30468285-30468362)
[»] scaffold1041 (1 HSPs)
scaffold1041 (444-520)||(2121-2197)
[»] scaffold0058 (2 HSPs)
scaffold0058 (431-540)||(3304-3413)
scaffold0058 (431-540)||(4476-4585)


Alignment Details
Target: chr6 (Bit Score: 210; Significance: 1e-114; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 106 - 408
Target Start/End: Complemental strand, 12585563 - 12585251
Alignment:
Q  106 agtcattttgaataaatcattctcttgtaattttcaaatcaattagttgtttatgtcattaatttcttcactaacaggacattttgtctagtttttggtt 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12585563 agtcattttgaataaatcattctcttgtaattttcaaatcaattagttgtttatgtcattaatttcttcactaacgggacattttgtctagtttttggtt 12585464  T
Q  206 tatgtcattgattcaactaaacagcttgattgttgagatgaaacattgatatcgaagctatgaatattaaagcattgtagtaatgagaaaggagagctgc 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  12585463 tatgtcattgattcaactaaacagcttgattgttgagatgaaacagtgctatcgaagctatgaatattaaagcattgtagtaatgagaaa--agagctgc 12585366  T
Q  306 aaataacattt-----------tatttatacaagctagtgaaaccttggcccattggaaaaa-agaacctcctatattcatttggcttggcccatagctt 393  Q
    |||||||||||           |||  ||||||||||||| |||||||||||||||||||||  |||| | ||||||||||||||| ||||||| || ||    
T  12585365 aaataacatttttgttttatgatatgaatacaagctagtgcaaccttggcccattggaaaaatggaacgtactatattcatttggcctggcccaaagttt 12585266  T
Q  394 gaattaggtctcctt 408  Q
    |||||||||||||||    
T  12585265 gaattaggtctcctt 12585251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 421 - 631
Target Start/End: Original strand, 29077328 - 29077538
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29077328 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 29077427  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||| |||||||    
T  29077428 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgccttgcatgctgtgttgtcttgtacgcgtggcaagaaggaagccacgt 29077527  T
Q  621 gttcagggacg 631  Q
    |||||||||||    
T  29077528 gttcagggacg 29077538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 421 - 631
Target Start/End: Original strand, 29112300 - 29112510
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29112300 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 29112399  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||    
T  29112400 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctggcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 29112499  T
Q  621 gttcagggacg 631  Q
    |||||||||||    
T  29112500 gttcagggacg 29112510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 701 - 879
Target Start/End: Original strand, 29112580 - 29112758
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  29112580 gcccctgcattacatattccttcttcttcacattttacttagaaacatcaaaaacatccttgactcttctccttcccgctaaaacgttctccattgtcac 29112679  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  29112680 ccctccaaaatcatcatcatctccatcgattctggcgtgtttgaagttcctgtgttcgaccgtgatcaaaggtaacacc 29112758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 701 - 879
Target Start/End: Original strand, 29077608 - 29077786
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |    
T  29077608 gcccctgcattacatatttcttcttcttcacattttactcagaaacatcaaaaacatccttgactcttctccttcccgctaaaacgttctccattttcac 29077707  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  29077708 ccctccaaaatcatcatcatctccatcgattctggcgtgtttgaagttcctgtgttcgaccgtgatcaaaggtaacacc 29077786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 421 - 631
Target Start/End: Original strand, 4641355 - 4641565
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||| |||||||||||||| ||||| ||||||| |||||||||||| |||||| ||    
T  4641355 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctc 4641454  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||| |||||||||||| ||||||| |||||||    
T  4641455 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtttccttgcatgctgtgctgtcttgtacgcgtggcaagaaggaagccacgt 4641554  T
Q  621 gttcagggacg 631  Q
    |||||||||||    
T  4641555 gttcagggacg 4641565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 420 - 631
Target Start/End: Original strand, 2968138 - 2968349
Alignment:
Q  420 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgt 519  Q
    ||||||||||||||| || |||||| |||||||||| |||  ||||||| |||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  2968138 ggagtgaaccatcaatttagtccctcaattttcacgggtctcccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgt 2968237  T
Q  520 ccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacg 619  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| |||||||||||| ||||||| ||||||    
T  2968238 ccatcaaaaaggtccatccgttaacgggctccgttagccgtgctgacatgtcgccttgcatgttgtgctgtcttgtacgcgtggcaagaaggaagccacg 2968337  T
Q  620 tgttcagggacg 631  Q
    ||||||| ||||    
T  2968338 tgttcagagacg 2968349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 702 - 839
Target Start/End: Original strand, 4641636 - 4641773
Alignment:
Q  702 cccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccc 801  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||    
T  4641636 cccctgcattacatattcctccttcttcacattttactcagaaacatcaaaaacatctttgactcttctccttcccgctaaaacgttctccattgtcgcc 4641735  T
Q  802 cctccaaaatcatcatcatctccatcgattcttgcgtg 839  Q
    |||||||||||||||||||||||||||||||| |||||    
T  4641736 cctccaaaatcatcatcatctccatcgattctggcgtg 4641773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 701 - 831
Target Start/End: Original strand, 2968405 - 2968535
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||| |    
T  2968405 gcccctgcattacatattcatccttcttcacattttactcagaaaaatcaaaaacatcattgactcttctccttcccgctaaaacgttctccattgtcac 2968504  T
Q  801 ccctccaaaatcatcatcatctccatcgatt 831  Q
    |||||||||||||||||||||||||| ||||    
T  2968505 ccctccaaaatcatcatcatctccattgatt 2968535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 436 - 631
Target Start/End: Complemental strand, 3018541 - 3018346
Alignment:
Q  436 ttcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccc 535  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||| |||| ||  |||||||||||||||||||||||| |||||||||||    
T  3018541 ttcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccc 3018442  T
Q  536 tccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgtgttcagggacg 631  Q
    ||| |  | | ||||||||||||||| |||  | ||| ||| |||| |||| |||| |||||||||||| ||| ||| ||||| ||||||||||||    
T  3018441 tccatccaagtgctccgttagccatgttgatctatcgtcttgcatgatgtgttgtcttgtacgcgtggcaagacggaagccacatgttcagggacg 3018346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 29114867 - 29114776
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29114867 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaaattagtccttcaattatgcgaaatttcaatttcatccctgaatttgt 29114776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 420 - 512
Target Start/End: Original strand, 17950560 - 17950652
Alignment:
Q  420 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||||||||||| ||| |||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  17950560 ggagtgaaccatcaatttcatccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 17950652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 30639611 - 30639702
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||  |||||||||    
T  30639611 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaatttaatctatgaatttgt 30639702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 3018588 - 3018528
Alignment:
Q  420 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaatt 480  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||    
T  3018588 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctgaatt 3018528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 416 - 512
Target Start/End: Complemental strand, 4646312 - 4646216
Alignment:
Q  416 aaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||| |||||||||||||| ||  |||||||||||| |||  ||||  ||||| |||| ||||||||||||||| ||||||| |||||| |||||||    
T  4646312 aaaaagagtgaaccatcaacttaatccctgaatttttacggatcggttaaattcgtccatcaattatgcgaaatatcaatttaatccctaaatttgt 4646216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 741 - 823
Target Start/End: Complemental strand, 30641137 - 30641057
Alignment:
Q  741 agaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctc 823  Q
    ||||||||||||||| |||||| | |||||||||||| |||||||  | ||| || || ||||||||||||||||||||||||    
T  30641137 agaaacatcaaaaacgtccttgacccttctccttcccactaaaac--tttccgttctcgcccctccaaaatcatcatcatctc 30641057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 35174391 - 35174482
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||| || ||  ||||||||| |||||| ||||||| ||  ||||||||||    
T  35174391 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtttctcaattatacgaaatatcaatttaatttctgaatttgt 35174482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 421 - 523
Target Start/End: Complemental strand, 17952166 - 17952064
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||| |||||  ||||   |||||| ||||  |  |||||||||||||  ||||||    
T  17952166 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 17952067  T
Q  521 cat 523  Q
    |||    
T  17952066 cat 17952064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 458 - 540
Target Start/End: Complemental strand, 32439178 - 32439096
Alignment:
Q  458 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 540  Q
    |||| |||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |||||||||||    
T  32439178 tcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 32439096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 477 - 541
Target Start/End: Complemental strand, 14338543 - 14338479
Alignment:
Q  477 aattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgtt 541  Q
    |||| |||||||| || | |||||||||||||||  ||||||||||| |||| ||||||||||||    
T  14338543 aattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtccctccgtt 14338479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 540
Target Start/End: Original strand, 20523374 - 20523485
Alignment:
Q  429 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaa 528  Q
    |||||||||| |||  |||||||||    |||| |||||| |||| | |||| |||||||| || ||||  |||||||||||  ||||||||||| ||||    
T  20523374 catcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaa 20523473  T
Q  529 aggtccctccgt 540  Q
     |||||||||||    
T  20523474 tggtccctccgt 20523485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 106 - 417
Target Start/End: Original strand, 28633184 - 28633505
Alignment:
Q  106 agtcattttgaataaatcattctcttgtaattttcaaatcaattagttgtttatgtcattaatttcttcactaacaggacattttgtctagtttttggtt 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  28633184 agtcattttgaataaatcattctcttgtaattttcaaatcaattagttgtttatgtcattaatttcttaactaacgggacattttgtatagtttttggtt 28633283  T
Q  206 tatgtcattgattcaactaaacagcttgattgttgagatgaaacattgatatcgaagctatgaatattaaagcattgtagtaatgagaaaggagagctgc 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  28633284 tatgtcattgattcaactaaacagcttgattgttgagatgaaacaatgatatcgaagctatgaatattaaagcattgtagtaatgagaaa--agagctgc 28633381  T
Q  306 aaataacattt-----------tatttatacaagctagtgaaaccttggcccattggaaaa-aagaacctcctatattcatttggcttggcccatagctt 393  Q
    |||||||||||           |||  ||||||||||||| ||||||||||||||||||||   |||| | |||||||| |||||| ||||||| || ||    
T  28633382 aaataacatttttgttttatgatatgaatacaagctagtgcaaccttggcccattggaaaaccggaacatactatattcgtttggcctggcccaaagttt 28633481  T
Q  394 gaattaggtctccttagttttaaa 417  Q
    |||||||||||||||  |||||||    
T  28633482 gaattaggtctccttgattttaaa 28633505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 421 - 631
Target Start/End: Original strand, 15372499 - 15372709
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||| | ||||||||||||| |||| ||||||| |||||||||||| |||||||||    
T  15372499 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgcccctcaattatgcaaaatatcaatttaatccctgaatttatcagacgtc 15372598  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||| |||||||||||| ||||||| |||||||    
T  15372599 catcaaaaaggtccctccgttaacgggctccgttagccatgctaacatgtcgccttgcatgttgtgctgtcttgtacgcgtggcaagaaggaagccacgt 15372698  T
Q  621 gttcagggacg 631  Q
    |||||||||||    
T  15372699 gttcagggacg 15372709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 421 - 631
Target Start/End: Original strand, 41706539 - 41706749
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| || || |||||||||||||| ||||| |||||| |||||||||||||||||||| ||||||| |||||||||||| ||  |||||    
T  41706539 gagtgaaccatcaatttagttcctgaattttcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcgaacgtc 41706638  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| | |||||    
T  41706639 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgccttgcatgctgtgctgtcttgtacgcgtggcaagaaggaagtcacgt 41706738  T
Q  621 gttcagggacg 631  Q
    |||||||||||    
T  41706739 gttcagggacg 41706749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 29909784 - 29909575
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||  ||||| |||||||||||||||    
T  29909784 gagtgaaccatcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtc 29909685  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||||  | | |||| |||||||||| |||  |||||| || |||| |||| |||| |||||||||||| ||||||| |||||||    
T  29909684 catcaaaaaggtccctccgtccaagtgctctgttagccatgttgatctgtcgcgttgcatgttgtgttgtcttgtacgcgtggcaagaaggaagccacgt 29909585  T
Q  621 gttcagggac 630  Q
    ||| ||||||    
T  29909584 gttaagggac 29909575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 419 - 630
Target Start/End: Complemental strand, 39523 - 39312
Alignment:
Q  419 aggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacg 518  Q
    ||||||||||||||||||| ||||| ||||||||||||||| ||||| || || ||||||||||||||||| |||| ||  |||||||||||||||||||    
T  39523 aggagtgaaccatcaaatttgtccccgaattttcacgcgtcagccaactttgtacctcaattatgcgaaatatcaacttagtccctgaatttgtcagacg 39424  T
Q  519 tccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccac 618  Q
    | ||| ||||||||||| ||||  | | | ||||||||||||||||| |||||| ||| ||||||||| |||| |||||||||||| ||||||| |||||    
T  39423 ttcatcaaaaaggtccccccgtccaagtgttccgttagccatgctgatatgtcgtcttgcatgctgtgttgtcttgtacgcgtggcaagaaggaagccac 39324  T
Q  619 gtgttcagggac 630  Q
    ||||||||||||    
T  39323 gtgttcagggac 39312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 702 - 831
Target Start/End: Original strand, 15372780 - 15372909
Alignment:
Q  702 cccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccc 801  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||  |    
T  15372780 cccctgcattacatattcctccttcttcacattttactcagaaacatcaaaaacatcattgactcttctccttcccgctaaaacgttctccattgtcaac 15372879  T
Q  802 cctccaaaatcatcatcatctccatcgatt 831  Q
    ||||||||||||||||||||||||| ||||    
T  15372880 cctccaaaatcatcatcatctccattgatt 15372909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 701 - 833
Target Start/End: Original strand, 39803 - 39935
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| || |    
T  39803 gcccctgcattacatattcctccttcttcacattttagtcagaaacatcaaaaacatccttgactcttctccttcccgctaaaactttctccattctcac 39902  T
Q  801 ccctccaaaatcatcatcatctccatcgattct 833  Q
    ||||||||||||||||||||||||||| |||||    
T  39903 ccctccaaaatcatcatcatctccatcaattct 39935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 421 - 630
Target Start/End: Original strand, 37417273 - 37417482
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||||||| |||||||| |||||||||| | ||||||||||||  ||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  37417273 gagtgaaccatcatattcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 37417372  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||||| |||  | | |||||||||||||||||||  ||| ||| | ||||||||| |||| ||||| |||||| ||||||| |||||||    
T  37417373 catcaaaaaggtcccttcgtccaagtgctccgttagccatgctgatctgttgccctgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgt 37417472  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  37417473 gttcaaggac 37417482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 415 - 630
Target Start/End: Complemental strand, 92476 - 92262
Alignment:
Q  415 aaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtca 514  Q
    ||||| ||||||||||||||||| |||||||||||||||||| || | ||| || || ||||||||||||||||| |||| ||  ||  |||||||||||    
T  92476 aaaaaagagtgaaccatcaaatt-gtccctgaattttcacgcatcagtcaacttcgtacctcaattatgcgaaatatcaacttagtctttgaatttgtca 92378  T
Q  515 gacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggagg 614  Q
    ||||| ||| ||||||||||||| ||  | | ||||||||||||||||||| |||||| ||| ||||||||| |||| |||||| ||||| ||||||| |    
T  92377 gacgttcatcaaaaaggtccctcagtccaagtgctccgttagccatgctgatatgtcgtcttgcatgctgtgttgtcttgtacgtgtggcaagaaggaag 92278  T
Q  615 ccacgtgttcagggac 630  Q
    ||||||||||||||||    
T  92277 ccacgtgttcagggac 92262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 425 - 574
Target Start/End: Original strand, 39560 - 39709
Alignment:
Q  425 gaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccata 524  Q
    |||||||||| || ||||||||||||| ||| |||||||||||| |||||||||||||||||||| ||||||| |||||||||||| |||| |||| ||     
T  39560 gaaccatcaatttagtccctgaatttttacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcaggcgtcgatt 39659  T
Q  525 aaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcc 574  Q
    ||||||||||||||||  | | ||| ||||||||||||||||||||||||    
T  39660 aaaaaggtccctccgtccaagtgcttcgttagccatgctgacatgtcgcc 39709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 701 - 831
Target Start/End: Original strand, 41706819 - 41706940
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    ||||||||||| ||||||||| |||||||||||||||||||         |||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  41706819 gcccctgcatttcatattcctccttcttcacattttactca---------aaaacatccttgactcttctccttcccgctaaaacgttctccattgtcac 41706909  T
Q  801 ccctccaaaatcatcatcatctccatcgatt 831  Q
    |||||||||||||||||||||||||| ||||    
T  41706910 ccctccaaaatcatcatcatctccattgatt 41706940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 420 - 630
Target Start/End: Original strand, 15432327 - 15432537
Alignment:
Q  420 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgt 519  Q
    ||||||||||||||||||  ||| |||||||| | | ||||| ||||||  ||||||||||||||||||| |||||||  || |||||||||||||||||    
T  15432327 ggagtgaaccatcaaatttatccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgt 15432426  T
Q  520 ccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacg 619  Q
    |||| |||||||| | | |||  | | ||||  |||| ||||||||||||||||| | |||| |||| |||| ||||| |||||| ||||||| | || |    
T  15432427 ccatcaaaaaggttcattcgtccaagtgctctattagtcatgctgacatgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagtcatg 15432526  T
Q  620 tgttcagggac 630  Q
    |||||| ||||    
T  15432527 tgttcaaggac 15432537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 705 - 879
Target Start/End: Original strand, 42001893 - 42002066
Alignment:
Q  705 ctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccct 804  Q
    |||||||||  || ||| ||||||||||||| | |||||||||||||||||||| |||   |||||||||||||||||||| ||| ||||| || |||||    
T  42001893 ctgcattacccatacctccttcttcacatttcagtcagaaacatcaaaaacatcattgatccttctccttcccgctaaaactttccccattatcacccct 42001992  T
Q  805 ccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    |||||| |||||||||||||  ||||| || ||| || |||||| ||||||||| | ||||| ||||||||||||    
T  42001993 ccaaaa-catcatcatctccggcgattattacgtttttgaagtttctgtgttcggctgtgattaaaggtaacacc 42002066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 425 - 625
Target Start/End: Original strand, 42879360 - 42879559
Alignment:
Q  425 gaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccata 524  Q
    |||||||||||||||||| | |||||| ||| ||||| ||||||  ||||| |||||||||||| | ||| ||  ||  ||||||||||||||||||||     
T  42879360 gaaccatcaaattcgtccttaaatttttacgggtcggtcaaattcatcccttaattatgcgaaaat-caacttagtctatgaatttgtcagacgtccatc 42879458  T
Q  525 aaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgtgttc 624  Q
    ||||||||||||||||  | | | |||||||| |||||||| |||||||| | ||||||||| |||| ||||| |||| | ||||||| | |||||||||    
T  42879459 aaaaaggtccctccgtccaagtgttccgttagtcatgctgatatgtcgccctgcatgctgtgttgtcttgtacacgtgacaagaaggaagtcacgtgttc 42879558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 421 - 510
Target Start/End: Complemental strand, 41233 - 41144
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaattt 510  Q
    ||||||| |||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  41233 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 11021533 - 11021624
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  11021533 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 11021624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 723 - 875
Target Start/End: Original strand, 15432627 - 15432779
Alignment:
Q  723 cttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatct 822  Q
    ||||||||||||| | |||||||||||||||||||| |||||  | |||||||||||| |||| ||| ||||| || ||||||||||||||||||||||     
T  15432627 cttcttcacatttcagtcagaaacatcaaaaacatctttggccttcctccttcccgctcaaactttcaccattctcacccctccaaaatcatcatcatca 15432726  T
Q  823 ccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaa 875  Q
    ||  |||||||  ||| || |||||| ||||||||| | || || ||||||||    
T  15432727 ccggcgattctgacgtttttgaagtttctgtgttcggctgtaattaaaggtaa 15432779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 422 - 630
Target Start/End: Original strand, 25619661 - 25619869
Alignment:
Q  422 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtcc 521  Q
    ||||||||||||||||||||| |||||||| | | ||||| ||||||  |||||||||||||| |||| |||| ||  ||||||||||||||| | ||||    
T  25619661 agtgaaccatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcatatgtcc 25619760  T
Q  522 ataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgtg 621  Q
    || |||||||||||||| |  | | ||||||||||||||| |||  ||||||  | |||| || | |||| | ||| |||||| |||| || ||||| ||    
T  25619761 atcaaaaaggtccctccatccaagtgctccgttagccatgttgatctgtcgctctgcatgttgcgttgtcttatacacgtggcaagaaagaagccacatg 25619860  T
Q  622 ttcagggac 630  Q
    |||| ||||    
T  25619861 ttcaaggac 25619869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 28248266 - 28248175
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  28248266 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 28248175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 728 - 879
Target Start/End: Original strand, 37417585 - 37417736
Alignment:
Q  728 tcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctccatc 827  Q
    ||||||||  |||||||||||||||||| |||||| ||||||||||||||||||||||  |||||||| || || |||||||| ||||||||||| |  |    
T  37417585 tcacatttctctcagaaacatcaaaaacgtccttgactcttctccttcccgctaaaactgtctccattctcacctctccaaaaccatcatcatcttcgac 37417684  T
Q  828 gattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    ||||||  ||| || ||||||  |||||||| | ||| | ||||||||||||    
T  37417685 gattctcacgtttttgaagttgttgtgttcggctgtggttaaaggtaacacc 37417736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 630
Target Start/End: Original strand, 42001610 - 42001818
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||| |||||||| ||| || | |||||||  |||||| |||||||||||| ||||||| |||| |||||||||||||| |     
T  42001610 gagtgaaccatcaaattcgtccttgaatttttacgggttgtccaaatttatccctctattatgcgaaatatcaatttaatccttgaatttgtcagacat- 42001708  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||| | ||| |  | | ||| ||||||||||| |||  ||||||| | |||| || | |||| ||||| |||| | ||||||| | |||||    
T  42001709 catcaaaaaggttcatccatccaagtgcttcgttagccatgttgatgtgtcgccctgcatgttgagttgtcttgtacacgtgacaagaaggaagtcacgt 42001808  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  42001809 gttcaaggac 42001818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 33193 - 33284
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||| || |||| ||||||||| ||||| ||||||| ||||||||||||||    
T  33193 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgtgaaatatcaatttaatccctgaatttgt 33284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 41708521 - 41708430
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| || ||| ||||||| ||||| |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  41708521 gagtgaatcatcaacttagtctctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 41708430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 744 - 876
Target Start/End: Complemental strand, 29909469 - 29909337
Alignment:
Q  744 aacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctccatcgattcttgcgtgttgg 843  Q
    |||||||||||| |||||| | ||||| |||||||||||||| | ||||||| || |||||||||||| ||||||||||||   ||||||  ||| || |    
T  29909469 aacatcaaaaacgtccttgacccttcttcttcccgctaaaacttcctccattttcacccctccaaaattatcatcatctccggtgattctgacgtttttg 29909370  T
Q  844 aagttcctgtgttcgaccgtgatcaaaggtaac 876  Q
    |||||  |||||||||| ||||| |||||||||    
T  29909369 aagtttgtgtgttcgactgtgattaaaggtaac 29909337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 15373979 - 15373888
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| || ||||||||||| ||||  |||||||||||| || ||||||||||||||||| ||||||| || |||||||||||    
T  15373979 gagtgaatcatcaacttagtccctgaattatcacaggtcggccaaattcgttcctcaattatgcgaaatatcaatttaattcctgaatttgt 15373888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 42880902 - 42880811
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||| ||| ||||| |||||| |||||| ||||||||||||| ||||||| |||| | |||||||    
T  42880902 gagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccataaatttgt 42880811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 701 - 807
Target Start/End: Original strand, 25619943 - 25620049
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||  || ||| ||||||||||||| |||||||||||| |||||| |||||| | |||||||||  || |||||| ||||||||| || |    
T  25619943 gcccctgcattacccatacctccttcttcacatttcactcagaaacataaaaaacgtccttgacccttctccttttcgataaaactttctccattctcac 25620042  T
Q  801 ccctcca 807  Q
    |||||||    
T  25620043 ccctcca 25620049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 750 - 879
Target Start/End: Complemental strand, 92148 - 92019
Alignment:
Q  750 aaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttc 849  Q
    |||||| |||||| | ||||| |||| |||||| || | ||||||| || |||||||||||||||||||||||||  |||||||  | | || ||||||     
T  92148 aaaaacgtccttgacccttcttcttctcgctaatacttcctccattttcacccctccaaaatcatcatcatctccgacgattctgacatttttgaagttt 92049  T
Q  850 ctgtgttcgaccgtgatcaaaggtaacacc 879  Q
     |||||||| | ||||| ||||||||||||    
T  92048 gtgtgttcggctgtgattaaaggtaacacc 92019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 723 - 879
Target Start/End: Original strand, 42879617 - 42879774
Alignment:
Q  723 cttcttcacattttactcagaaacatcaaaaa-catccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatc 821  Q
    |||| ||||||||  ||||||||||| ||||| | |||||| |||||||| |||  |||||||| ||||||||| || || |||||||| ||||||||||    
T  42879617 cttcctcacatttctctcagaaacataaaaaaacgtccttgactcttctctttcttgctaaaactttctccattctcacctctccaaaaccatcatcatc 42879716  T
Q  822 tccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    | || |||||||  ||| || ||||||  ||||||||   ||| | ||||||||||||    
T  42879717 ttcaacgattctcacgtttttgaagttgttgtgttcggttgtggttaaaggtaacacc 42879774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 420 - 512
Target Start/End: Complemental strand, 37418861 - 37418769
Alignment:
Q  420 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||||| |||||| ||||| | |||||||||||| |||||||||||| |||| | |||||||| |||| ||||| | |||||| |||||||    
T  37418861 ggagtgaatcatcaacttcgtacttgaattttcacgggtcggccaaattcgtcctttaattatgcaaaatatcaatctaatccctaaatttgt 37418769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 701 - 879
Target Start/End: Complemental strand, 39243 - 39070
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||  || ||| ||||||||||||    |||| ||||| |||||| |||||| | ||||| |||| |||||| || | ||||||| || |    
T  39243 gcccctgcattacccatacctccttcttcacatt----tcag-aacataaaaaacgtccttgacccttcttcttctcgctaatacttcctccattttcac 39149  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    |||||||||||||||||||| |||  |||||||    | || ||||||  |||||||| | ||||| ||||||||||||    
T  39148 ccctccaaaatcatcatcatgtccgacgattctgaaatttttgaagtttgtgtgttcggctgtgattaaaggtaacacc 39070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 431 - 540
Target Start/End: Original strand, 16763086 - 16763195
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    |||| |||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |    
T  16763086 tcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 16763185  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  16763186 gtccctccgt 16763195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 523
Target Start/End: Original strand, 361445 - 361547
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||| |||||| ||||||| |||||||||| |  ||||||||| |  ||||||||||||| ||||| |||| ||  ||  |||||| ||||||||||    
T  361445 gagtgaatcatcaacttcgtccttgaattttcatgaatcggccaaaatcatccctcaattatgtgaaatatcaaattagtcattgaattcgtcagacgtc 361544  T
Q  521 cat 523  Q
    |||    
T  361545 cat 361547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 425 - 523
Target Start/End: Complemental strand, 11023132 - 11023035
Alignment:
Q  425 gaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccat 523  Q
    |||||||||| |||||||||||||||||| | |||||||||||| ||||| |||||   |||||| ||||  |  |||||||||||||  |||||||||    
T  11023132 gaaccatcaatttcgtccctgaattttca-gggtcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccat 11023035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 458 - 540
Target Start/End: Complemental strand, 19908353 - 19908271
Alignment:
Q  458 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 540  Q
    |||||||||||||||||| |||| |||||||| || ||||  ||| |||||||  ||||||||| | |||| |||||||||||    
T  19908353 tcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtccgtcaaaatggtccctccgt 19908271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 540
Target Start/End: Complemental strand, 14389218 - 14389109
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||  ||||||||||    ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||  || | |||||| |||| |    
T  14389218 tcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtccatcaaaatg 14389119  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  14389118 gtccctccgt 14389109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 474
Target Start/End: Original strand, 28246663 - 28246716
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccc 474  Q
    |||||||||||||| |||||||||||||||| | | |||||||||||| |||||    
T  28246663 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaattcgtccc 28246716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 540
Target Start/End: Complemental strand, 39664882 - 39664773
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    ||||||||||| |||||  |||| | |||||| || ||||  |||||||||||  ||||||||||| |||| |    
T  39664882 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 39664783  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  39664782 gtccctccgt 39664773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 461 - 540
Target Start/End: Original strand, 40560263 - 40560342
Alignment:
Q  461 gccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 540  Q
    |||||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||||||| ||||  ||||||||||    
T  40560263 gccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatagtccctccgt 40560342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 11315378 - 11315340
Alignment:
Q  502 cctgaatttgtcagacgtccataaaaaaggtccctccgt 540  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  11315378 cctgaatttgtcagacgtccatcaaaatggtccctccgt 11315340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 459 - 540
Target Start/End: Complemental strand, 44709851 - 44709770
Alignment:
Q  459 cggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 540  Q
    |||||||||| | |||| |||| ||||||||  | ||||  |||||||||||  ||||||||||| |||| |||||||||||    
T  44709851 cggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 44709770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 191; Significance: 1e-103; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 421 - 631
Target Start/End: Original strand, 10762581 - 10762791
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10762581 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 10762680  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||    
T  10762681 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctggcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 10762780  T
Q  621 gttcagggacg 631  Q
    |||||||||||    
T  10762781 gttcagggacg 10762791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 421 - 631
Target Start/End: Complemental strand, 10372830 - 10372620
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10372830 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgtc 10372731  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||| || |||||||    
T  10372730 catcaaaaaggtccctccgttaacggactccgttagccatgctgacatgtcgccttgcatgctgtgctgtcttgtacgcgtggcaagaaagaagccacgt 10372631  T
Q  621 gttcagggacg 631  Q
    |||||||||||    
T  10372630 gttcagggacg 10372620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 701 - 879
Target Start/End: Original strand, 10762861 - 10763039
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  10762861 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttgactcttctccttcccgctaaaacgttctccattgtcac 10762960  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  10762961 ccctccaaaatcatcatcatctccatcgattctggcgtgtttgaagttcctgtgttcgaccgtgatcaaaggtaacacc 10763039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 421 - 631
Target Start/End: Complemental strand, 44794884 - 44794674
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| || |||||||||||||||| |||||| |||||| |||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  44794884 gagtgaaccatcaatttagtccctgaattttcacacgtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtc 44794785  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||| |||||||    
T  44794784 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgccttgcatgctgtgatgtcttgtacgcgtggcaagaaggaagccacgt 44794685  T
Q  621 gttcagggacg 631  Q
    |||||||||||    
T  44794684 gttcagggacg 44794674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 421 - 631
Target Start/End: Original strand, 47941811 - 47942021
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| || ||||||||||||| ||| ||||| |||||| ||| |||||||||||||||| ||||||| |||||||||||| |||||||||    
T  47941811 gagtgaaccatcaatttagtccctgaatttttacgggtcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtc 47941910  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| ||||||| |||||||    
T  47941911 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgccttgcatgttgtgctgtcttgtacgcgtggcaagaaggaagccacgt 47942010  T
Q  621 gttcagggacg 631  Q
    ||||| |||||    
T  47942011 gttcaaggacg 47942021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 701 - 879
Target Start/End: Complemental strand, 10372520 - 10372342
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |    
T  10372520 gcccctgcattacatattcctccttcttcacattttacttagaaacatcaaaaacatccttgactcttctccttcccgctaaaacattctccattgtcac 10372421  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    ||||||||||||||||||||||||||||||||| || | || |||||||||||||||||| ||||||||||||||||||    
T  10372420 ccctccaaaatcatcatcatctccatcgattctggcatttttgaagttcctgtgttcgactgtgatcaaaggtaacacc 10372342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 701 - 876
Target Start/End: Complemental strand, 2350355 - 2350180
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    ||||||||||||||||||||| ||||||||||||| | | |||||||||||||||||||||| |||||||||||||| ||||||| ||||||||| || |    
T  2350355 gcccctgcattacatattcctccttcttcacatttcagttagaaacatcaaaaacatccttgactcttctccttcccactaaaactttctccattctcac 2350256  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaac 876  Q
    |||||||||||||| |||||||||  |||||||  ||| || ||||||||||||||| || |||||||||||||||    
T  2350255 ccctccaaaatcataatcatctccggcgattctgacgtttttgaagttcctgtgttcaactgtgatcaaaggtaac 2350180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 701 - 831
Target Start/End: Complemental strand, 44794604 - 44794474
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||| |    
T  44794604 gcccctgcattacatattcctccttcttcacattttactcagaaacattaaaaacatctttgactcttctccttcccgctaaaacgttctccattgtcac 44794505  T
Q  801 ccctccaaaatcatcatcatctccatcgatt 831  Q
    ||||||||||||||||| |||||||| ||||    
T  44794504 ccctccaaaatcatcataatctccattgatt 44794474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 2350631 - 2350419
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| || ||||||||||||||| | |||||||||||| |||||||||||||||||||| ||||||| ||| |||||||| ||||||||     
T  2350631 gagtgaaccatcaatttagtccctgaattttcatgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatctctgaatttatcagacgtt 2350532  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctg---tcctgtacgcgtggcgagaaggaggcca 617  Q
    ||| ||||||||||||| ||  | | |||||||||||||||||||||||||||  | ||||||||| ||   || ||||| |||||| ||||||| ||||    
T  2350531 catcaaaaaggtccctctgtccaagtgctccgttagccatgctgacatgtcgctctgcatgctgtgttgtactcttgtacacgtggcaagaaggaagcca 2350432  T
Q  618 cgtgttcagggac 630  Q
    |||||||| ||||    
T  2350431 cgtgttcaaggac 2350419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 412 - 630
Target Start/End: Original strand, 35996054 - 35996272
Alignment:
Q  412 tttaaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttg 511  Q
    |||||||  |||||||||||||| || ||| ||| ||||| | | ||||| |||||| ||||||||||| ||| |||| ||||||| ||||||||||||     
T  35996054 tttaaaatagagtgaaccatcaatttagtctctggatttttatgggtcggtcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaattta 35996153  T
Q  512 tcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaagg 611  Q
    |||||||||||| ||||||||||||||||  | | |||||||||||||||||||||||||||| | |||| |||| |||| ||||| |||||| ||||||    
T  35996154 tcagacgtccatcaaaaaggtccctccgtccaagtgctccgttagccatgctgacatgtcgccatgcatgttgtgttgtcttgtacacgtggcaagaagg 35996253  T
Q  612 aggccacgtgttcagggac 630  Q
    | |||||||||||| ||||    
T  35996254 aagccacgtgttcaaggac 35996272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 701 - 875
Target Start/End: Original strand, 35996343 - 35996517
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    ||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||  ||| |||||||||||||||||||||| ||||||| | || |    
T  35996343 gcccctgcattacatattcctccttcttcacatttcagtcagaaacatcaaaaacatatttgactcttctccttcccgctaaaactttctccagtctcac 35996442  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaa 875  Q
    ||||||||||||||||||||||||  |||||||  ||| || |||||||| ||||||||  ||||||||||||||    
T  35996443 ccctccaaaatcatcatcatctccgccgattctgacgtttttgaagttcccgtgttcgattgtgatcaaaggtaa 35996517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 44558617 - 44558408
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||||||  ||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  44558617 gagtgaaccatcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 44558518  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||| |||||  | | |||  ||||||||||||||  |||| || | |||||| || |||| |||||||||||| ||||||| |||||||    
T  44558517 catcaaaaaggtccttccgtccaagtgctatgttagccatgctgatctgtcaccatgcatgctctgttgtcttgtacgcgtggcaagaaggaagccacgt 44558418  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  44558417 gttcaaggac 44558408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 421 - 630
Target Start/End: Original strand, 2827407 - 2827613
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||    |||||||||||||| ||||| |||| ||  ||| |||||||||||||||||    
T  2827407 gagtgaaccatcaaattcgtccctaaattttcacacgtcggccaac---gtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtc 2827503  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||||  | |  ||||||||||| ||||||  ||||| ||| |||| |||| |||| |||||||||||| ||||||| |||||||    
T  2827504 catcaaaaaggtccctccgtccaagtcctccgttagccttgctgatctgtcgtcttgcatgatgtgttgtcttgtacgcgtggcaagaaggaagccacgt 2827603  T
Q  621 gttcagggac 630  Q
    ||||||||||    
T  2827604 gttcagggac 2827613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 419 - 512
Target Start/End: Complemental strand, 10768043 - 10767950
Alignment:
Q  419 aggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10768043 aggagtgaaccatcaagttagttcctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcattttcatccctgaatttgt 10767950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 10371057 - 10371148
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10371057 gagtgaaccatcaacttagtccctgaattttcacgcgtcggctaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgt 10371148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 723 - 824
Target Start/End: Original strand, 4519670 - 4519771
Alignment:
Q  723 cttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatct 822  Q
    |||| |||||||| |||||||||||||||||||||||||| | ||||| |||||||||||||| ||||||||| || || ||||||||||||||||||||    
T  4519670 cttcctcacatttcactcagaaacatcaaaaacatccttgacccttcttcttcccgctaaaactttctccattctcacctctccaaaatcatcatcatct 4519769  T
Q  823 cc 824  Q
    ||    
T  4519770 cc 4519771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 421 - 630
Target Start/End: Original strand, 27624806 - 27625015
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||  |||| |||| || |||||||| ||| || || ||||||  ||  ||||||||||||||| |||| ||  |||||||||||||||||||||    
T  27624806 gagtgaacggtcaacttcgcccttgaatttttacgggttggtcaaattcatctttcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 27624905  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||  ||||| || | |||| |||||||||| |||  ||||||| | |||||| || |||| |||||| ||||| ||||||| |||||||    
T  27624906 catcaaaaaggtcattccgtcaaagtgctctgttagccatgttgatctgtcgccatgcatgctttgttgtcttgtacgtgtggcaagaaggaagccacgt 27625005  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  27625006 gttcaaggac 27625015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 420 - 512
Target Start/End: Complemental strand, 39923099 - 39923007
Alignment:
Q  420 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||||||||||| |||||||||||||||| ||  ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  39923099 ggagtgaaccatcaatttcgtccctgaatttttacaggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 39923007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 724 - 834
Target Start/End: Complemental strand, 51041755 - 51041644
Alignment:
Q  724 ttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttccc-gctaaaacgttctccattgtcccccctccaaaatcatcatcatct 822  Q
    |||||||||||| ||||||||||||||||||| || ||| | |||||||||||| |||||| | ||||||||| || |||||||||||||||||||||||    
T  51041755 ttcttcacatttcactcagaaacatcaaaaacgtcattgacccttctccttccccgctaaagctttctccattctcacccctccaaaatcatcatcatct 51041656  T
Q  823 ccatcgattctt 834  Q
    ||  ||||||||    
T  51041655 ccgacgattctt 51041644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 630
Target Start/End: Original strand, 4519376 - 4519585
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||| ||||||||||||| |||||||| ||  || |||||||||  ||||||||||||||||||| |||  ||   |  ||||||||| |||| |     
T  4519376 gagtgaacaatcaaattcgtccttgaatttttaccggttggccaaattcatccctcaattatgcgaaatatcagcttagcctttgaatttgttagacatt 4519475  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||||  |   |||||||||||||||||||  ||||||| | ||||||||| |||| ||||| |||||| | ||| | | |||||    
T  4519476 catcaaaaaggtccctccgtccaaatgctccgttagccatgctgatctgtcgccctgcatgctgtgttgtcttgtacacgtggcaaaaagaaagtcacgt 4519575  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  4519576 gttcaaggac 4519585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 51042054 - 51041846
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||| |||||||||||| | |||||| ||  ||||| ||||||  ||||||||||||| ||||| |||| ||  ||| ||||||||||||||||     
T  51042054 gagtgaaccgtcaaattcgtccttaaatttttacaggtcggtcaaattcatccctcaattatgtgaaatatcaacttagtccatgaatttgtcagacgt- 51041956  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||||||| |  | | |||  ||||||||||||||  ||||||| | |||| |||| |||| | ||| |||||| ||||||| ||||| |    
T  51041955 catcaaaaaggtccctccatccaagtgctttgttagccatgctgatctgtcgccctgcatgttgtgttgtcttatacacgtggcaagaaggaagccacat 51041856  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  51041855 gttcaaggac 51041846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 42879275 - 42879366
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||| |||| |||||||||    
T  42879275 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgt 42879366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 429 - 512
Target Start/End: Original strand, 44792942 - 44793025
Alignment:
Q  429 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||| || ||||||||||| ||||| |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  44792942 catcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 44793025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 44992808 - 44992899
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||| |||||||| |||||    
T  44992808 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgagtttgt 44992899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 701 - 858
Target Start/End: Original strand, 27625070 - 27625227
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||  || ||| |||||||| |||| | ||||||| || |||||| || ||| | |||||||||||| ||||||| || |||||| || |    
T  27625070 gcccctgcattacccatacctccttcttcagatttcagtcagaaaaataaaaaacgtcattgacccttctccttcccactaaaactttatccattctcac 27625169  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcg 858  Q
    ||||||||||||||||||||||||   ||||||  ||| || |||||| |||||||||    
T  27625170 ccctccaaaatcatcatcatctccgatgattctgacgtttttgaagtttctgtgttcg 27625227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 416 - 512
Target Start/End: Complemental strand, 39085248 - 39085152
Alignment:
Q  416 aaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||| ||||||| |||||| |||||||||||||||| ||| ||||| ||| || |||||||||||||||||||| ||||||| |||| |||||||||    
T  39085248 aaaatgagtgaatcatcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccatgaatttgt 39085152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 702 - 822
Target Start/End: Complemental strand, 44558335 - 44558215
Alignment:
Q  702 cccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccc 801  Q
    ||||||||||||  || ||| |||||| |||||| | ||||||| ||||||||| |||||| | |||||||||||| |||||||  | |||||| || ||    
T  44558335 cccctgcattacccatacctccttctttacatttcagtcagaaaaatcaaaaacgtccttgacccttctccttcccactaaaactctatccattctcacc 44558236  T
Q  802 cctccaaaatcatcatcatct 822  Q
    |||||||||||||||||||||    
T  44558235 cctccaaaatcatcatcatct 44558215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 2828502 - 2828411
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||| | | ||||||||| || |||||||||||||||||||| ||||||| |||| |||||||||    
T  2828502 gagtgaatcatcaacttcgtccctgaatttttatgggtcggccaactttgtccctcaattatgcgaaatatcaatttaatccttgaatttgt 2828411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 35997858 - 35997767
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| || ||||||||||||||||| |||||||||||| || ||||||||||  ||||| ||||||| ||||||||||||||    
T  35997858 gagtgaatcatcaactttgtccctgaattttcacgggtcggccaaattcgttcctcaattataagaaatatcaatttaatccctgaatttgt 35997767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 43778389 - 43778480
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| ||||||| |||||||| ||| ||||| ||| || |||||||||||||||||||| ||||||| |||||| |||||||    
T  43778389 gagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgt 43778480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 701 - 879
Target Start/End: Original strand, 2827683 - 2827856
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||  || ||| ||||| |||||||    |||||| ||||||||| |||||| | ||||| |||| ||||||||| | ||||||| || |    
T  2827683 gcccctgcattacccatacctccttctccacattt----cagaaa-atcaaaaacgtccttgacccttcttcttctcgctaaaacttcctccattttcac 2827777  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    ||||||||||||||||||||||||  |||||||  | | || ||||||  ||||||||   ||||| ||||||||||||    
T  2827778 ccctccaaaatcatcatcatctccggcgattctgacatttttgaagtttgtgtgttcggttgtgattaaaggtaacacc 2827856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 47942837 - 47942746
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| || || | |||||| ||||| ||||| |||||| |||||||||||||||||||| ||||||| |||| |||||||||    
T  47942837 gagtgaatcatcaacttagttcatgaattatcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgt 47942746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 421 - 523
Target Start/End: Original strand, 39083639 - 39083741
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||| |||||| ||||   |||||| ||||  |  |||||||||||||  ||||||    
T  39083639 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 39083738  T
Q  521 cat 523  Q
    |||    
T  39083739 cat 39083741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 430 - 512
Target Start/End: Original strand, 44556629 - 44556711
Alignment:
Q  430 atcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||| || ||||||||||||| ||| ||||| ||||||||||||||||||||| ||||| |||||||  ||| |||||||||    
T  44556629 atcaactttgtccctgaatttttacgggtcggtcaaattagtccctcaattatgtgaaatatcaatttagtccatgaatttgt 44556711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 431 - 540
Target Start/End: Complemental strand, 41761860 - 41761751
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| ||||||||||    ||||||||||| |||||  |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |    
T  41761860 tcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 41761761  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  41761760 gtccctccgt 41761751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 444 - 512
Target Start/End: Original strand, 51040758 - 51040826
Alignment:
Q  444 tgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||||||||| ||||||||||||  ||| ||||||||||||||| ||||||  ||||||||||||||    
T  51040758 tgaattttcacgggtcggccaaattcatccttcaattatgcgaaatatcaattcaatccctgaatttgt 51040826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 421 - 523
Target Start/End: Original strand, 39921494 - 39921596
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||| |||||  ||||   |||||| ||||  |  |||||||||||||  ||||||    
T  39921494 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 39921593  T
Q  521 cat 523  Q
    |||    
T  39921594 cat 39921596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 422 - 523
Target Start/End: Original strand, 39189383 - 39189484
Alignment:
Q  422 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtcc 521  Q
    ||||||||||||| |||||||||||||||||| | |||||||||||| |||||  ||||   |||||| ||||  |  |||||||||||||  |||||||    
T  39189383 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtcc 39189482  T
Q  522 at 523  Q
    ||    
T  39189483 at 39189484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 417 - 523
Target Start/End: Original strand, 5484536 - 5484642
Alignment:
Q  417 aaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcaga 516  Q
    |||||||||||||||||| ||||||| |||||||| | | |||||||||||| |||||  ||||   |||||| ||||  |  |||||||||||||  ||    
T  5484536 aaaggagtgaaccatcaatttcgtccatgaatttttaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttga 5484635  T
Q  517 cgtccat 523  Q
    |||||||    
T  5484636 cgtccat 5484642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 462 - 512
Target Start/End: Complemental strand, 27626778 - 27626728
Alignment:
Q  462 ccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||||||||| | ||||||||||||| ||||||| ||||||||||||||    
T  27626778 ccaaattagtccatgaattatgcgaaatatcaatttaatccctgaatttgt 27626728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 523
Target Start/End: Complemental strand, 42880879 - 42880777
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| || ||||||||||||||| | |||||||||||| |||||  ||||   |||||| ||||  |  |||||||||||||  ||||||    
T  42880879 gagtgaaccatcaattttgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 42880780  T
Q  521 cat 523  Q
    |||    
T  42880779 cat 42880777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 421 - 523
Target Start/End: Complemental strand, 43779991 - 43779889
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||| |||| |||||||||||||||||| | |||||||||||| |||||  ||||   |||||| ||||  |  |||||||||||||  ||||||    
T  43779991 gagtgaaccttcaatttcgtccctgaattttcaggggtcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 43779892  T
Q  521 cat 523  Q
    |||    
T  43779891 cat 43779889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 494
Target Start/End: Complemental strand, 4520542 - 4520469
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaa 494  Q
    ||||||| |||||| ||||||| |||||||| | | ||||||||||||  ||| ||||||||||||||| ||||    
T  4520542 gagtgaatcatcaacttcgtccttgaatttttatgagtcggccaaattcatccatcaattatgcgaaatatcaa 4520469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 468
Target Start/End: Complemental strand, 5486143 - 5486096
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaatt 468  Q
    |||||||||||||| |||||||||||||||| | | ||||||||||||    
T  5486143 gagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaatt 5486096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 470 - 512
Target Start/End: Complemental strand, 39190861 - 39190819
Alignment:
Q  470 gtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||||||||||||||||| ||||||| |||| |||||||||    
T  39190861 gtccctcaattatgcgaaatatcaatttaatccgtgaatttgt 39190819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 191; Significance: 1e-103; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 421 - 631
Target Start/End: Complemental strand, 41021127 - 41020917
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41021127 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 41021028  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||    
T  41021027 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctggcatgctgtgctgtcctgtacgcgtggcaagaaggaagccacgt 41020928  T
Q  621 gttcagggacg 631  Q
    |||||||||||    
T  41020927 gttcagggacg 41020917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 701 - 879
Target Start/End: Complemental strand, 41020847 - 41020669
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  41020847 gcccctgcattacatatttcttcttcttcacattttactcagaaacatcaaaaacatccttgactcttctccttcccgctaaaacgttctccattgtcac 41020748  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  41020747 ccctccaaaatcatcatcatctccatcgattctggcgtgtttgaagttcctgtgttcgaccgtgatcaaaggtaacacc 41020669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 409 - 630
Target Start/End: Complemental strand, 23888908 - 23888687
Alignment:
Q  409 agttttaaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaat 508  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||| |||  ||  |||||||||    
T  23888908 agttttataaacgagtgaaccatcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaat 23888809  T
Q  509 ttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgaga 608  Q
    |||||| |||||||| ||||||||||||||||  |    ||||||||||| ||||||  ||||||||| ||| ||||| |||| |||||||||||| |||    
T  23888808 ttgtcaaacgtccatcaaaaaggtccctccgtccaaatcctccgttagccttgctgatctgtcgccttgcatactgtgttgtcttgtacgcgtggcaaga 23888709  T
Q  609 aggaggccacgtgttcagggac 630  Q
    |||| ||||| |||||||||||    
T  23888708 aggaagccacatgttcagggac 23888687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 420 - 630
Target Start/End: Complemental strand, 18430396 - 18430186
Alignment:
Q  420 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgt 519  Q
    ||||||||||||||||||||||| |||||||| ||| ||| ||||||||  ||||||||||||||||||| |||| ||  ||||||||| ||||||||||    
T  18430396 ggagtgaaccatcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatatgtcagacgt 18430297  T
Q  520 ccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacg 619  Q
    |||  ||||||||||||||||  | | ||||||||||||||| |||||||||||| | ||||| ||| |||| ||||| |||||| |||||||  |||||    
T  18430296 ccaataaaaaggtccctccgtccaagtgctccgttagccatggtgacatgtcgccctgcatgccgtgttgtcttgtacacgtggcaagaaggaaaccacg 18430197  T
Q  620 tgttcagggac 630  Q
    |||||| ||||    
T  18430196 tgttcaaggac 18430186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 421 - 630
Target Start/End: Original strand, 23774152 - 23774360
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  23774152 gagtgaaccatcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtc 23774251  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||| |||||| |||  | | |||| |||||||||| |||  ||||||| | |||| |||| |||| ||||| |||||| | ||||| |||||||    
T  23774252 catcaaaaaagtccct-cgtctaagtgctctgttagccatgttgatctgtcgccctgcatgatgtgttgtcttgtacacgtggcaataaggaagccacgt 23774350  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  23774351 gttcaaggac 23774360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 45257344 - 45257135
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||  |||||||||||||  |||| |||| ||  | |||||||||||||||||||    
T  45257344 gagtgaaccatcaaattcgttcttgaattttcacgggtcggccaaattcatccctcaattatgtaaaatatcaacttagttcctgaatttgtcagacgtc 45257245  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||||||||| ||||||||||  | | |||||||||| |||||||||||| |||| | |||| |||| |||| ||||| |||||| |||| || |||||||    
T  45257244 cataaaaaatgtccctccgtccaagtgctccgttagtcatgctgacatgccgccctgcatgttgtgttgtcttgtacacgtggcaagaatgaagccacgt 45257145  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  45257144 gttcaaggac 45257135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 415 - 630
Target Start/End: Complemental strand, 31887582 - 31887367
Alignment:
Q  415 aaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtca 514  Q
    |||||||||||||||||||||||||||| ||||||||||||  |||| ||||||   || ||||||||||||||| |||| ||  |||||||||||||||    
T  31887582 aaaaaggagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagtccctgaatttgtca 31887483  T
Q  515 gacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggagg 614  Q
    || ||| || ||||||||||||||||  | | |||||||||||||||||||  ||||||||| ||||||||| |||| ||||| |||||| | ||||| |    
T  31887482 gatgtctatcaaaaaggtccctccgtccaagtgctccgttagccatgctgatttgtcgccttgcatgctgtgttgtcttgtacacgtggcaaaaaggaag 31887383  T
Q  615 ccacgtgttcagggac 630  Q
    |||  |||||| ||||    
T  31887382 ccatatgttcaaggac 31887367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 421 - 630
Target Start/End: Original strand, 48633877 - 48634090
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||| |||||||||||| ||||| |||||| |||| ||||||||||||||| |||| ||  |||||||||||||||||||||    
T  48633877 gagtgaaccatcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 48633976  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtg----ctgtcctgtacgcgtggcgagaaggaggcc 616  Q
    ||| ||||||||||||||||  | | ||||||||||||||| |||  ||||||| | |||| ||||     |||| ||||| |||||| | ||||| |||    
T  48633977 catcaaaaaggtccctccgtccaagtgctccgttagccatgttgatctgtcgccctgcatgatgtgttgtttgtcttgtacacgtggcaaaaaggaagcc 48634076  T
Q  617 acgtgttcagggac 630  Q
    ||||||||| ||||    
T  48634077 acgtgttcaaggac 48634090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 421 - 602
Target Start/End: Complemental strand, 40509035 - 40508854
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||| || |||| |||||||||||||||||    
T  40509035 gagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtc 40508936  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtg 602  Q
    ||| ||||| ||||||||||  | | | |||||||| | ||||||  ||||||| | |||| |||| |||| ||||| ||||    
T  40508935 catcaaaaatgtccctccgtccaagtgttccgttagtcgtgctgatctgtcgccctgcatgttgtgttgtcatgtacacgtg 40508854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 33113304 - 33113096
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||||||||||| |||| |||||||| ||| |||||||||| |  ||||||||||||||||||| |||| ||  ||||| |||||||||||||||    
T  33113304 gagtgaaccatcaaattagtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtc 33113205  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||||||||| || | | |||||||||||||| ||  |||||||   |||| || |||||| ||||| |||||| | ||||| |||||||    
T  33113204 catcaaaaaggtccctccgtcaa-gtgatccgttagccatgccgatctgtcgcccagcatgttgcgctgtcttgtacacgtggcaaaaaggaagccacgt 33113106  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  33113105 gttcaaggac 33113096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 423 - 630
Target Start/End: Complemental strand, 33852792 - 33852585
Alignment:
Q  423 gtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtcca 522  Q
    ||||| ||| ||||| |||| |||||||| ||| || || ||||||  ||||||||||||||||||| ||||||| ||  |||||||| |||||||||||    
T  33852792 gtgaatcattaaatttgtccttgaatttttacgggttggtcaaatttatccctcaattatgcgaaatatcaatttaatttctgaatttatcagacgtcca 33852693  T
Q  523 taaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgtgt 622  Q
    | ||||||||||||| ||  | | ||||||||||||||| |||||||||||| | |||| |||| |||| ||||  |||||| ||||||| |||||||||    
T  33852692 tcaaaaaggtccctctgtccaagtgctccgttagccatggtgacatgtcgccctgcatgttgtgttgtcttgtagacgtggcaagaaggaagccacgtgt 33852593  T
Q  623 tcagggac 630  Q
    ||| ||||    
T  33852592 tcaaggac 33852585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 40998515 - 40998606
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40998515 gagtgaaccatcaagttagtccctgaattttcacgcgtcggtcaaattagtccctcaattatgcgaaatttcattttcatccctgaatttgt 40998606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 701 - 833
Target Start/End: Complemental strand, 24382735 - 24382603
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||  || ||| ||||||||||||| |||||||||||| |||||| || ||| |||||||||||||||||||||| ||||||||| || |    
T  24382735 gcccctgcattacccatacctccttcttcacatttcactcagaaacataaaaaacgtcattgtctcttctccttcccgctaaaacattctccattttcac 24382636  T
Q  801 ccctccaaaatcatcatcatctccatcgattct 833  Q
    |||| |||||||||||||||||||  |||||||    
T  24382635 cccttcaaaatcatcatcatctccgacgattct 24382603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 421 - 565
Target Start/End: Complemental strand, 45898472 - 45898328
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||||||||||||||| ||||| |||| || |||||| ||||||||||||| |||| ||  ||| |||||||||||||||||    
T  45898472 gagtgaaccatcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacgtc 45898373  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctga 565  Q
     || ||||||||||||||||  | |  ||||||||||| ||||||    
T  45898372 tatcaaaaaggtccctccgtccaagtcctccgttagccttgctga 45898328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 24383017 - 24382808
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||||||||||| |||| |||||||| ||| ||||||||||||  ||| ||||||||| ||||| |||| ||  ||| || ||||||||||||||    
T  24383017 gagtgaaccatcaaattggtccttgaatttttacgggtcggccaaattcatccttcaattatgagaaatatcaacttagtccatggatttgtcagacgtc 24382918  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||||  | |   ||||||||||||||||| |||||||| | |||| |||| |||| | ||  || ||| | ||||| |||||||    
T  24382917 catcaaaaaggtccctccgtccaagtcatccgttagccatgctgatatgtcgccctgcatgttgtgttgtcttatatacggggcaaaaaggaagccacgt 24382818  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  24382817 gttcaaggac 24382808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 723 - 879
Target Start/End: Complemental strand, 33113008 - 33112852
Alignment:
Q  723 cttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatct 822  Q
    |||| |||||||| ||||| |||||| |||||| ||  || | |||||| ||||||||||||| ||||||||| || || ||||||||||||||||||||    
T  33113008 cttcctcacatttcactcataaacataaaaaacgtctctgacccttctcattcccgctaaaactttctccattctcacctctccaaaatcatcatcatct 33112909  T
Q  823 ccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    ||| |||||||  ||| || |||||| ||||||||||| ||| | ||||||||||||    
T  33112908 ccagcgattctcacgtttttgaagtttctgtgttcgactgtggttaaaggtaacacc 33112852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 701 - 879
Target Start/End: Complemental strand, 18430121 - 18429943
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||  || |||  |||||||||||| | |||||| ||||||||||||||||| |  ||| | || |||||||||| ||||||||| || |    
T  18430121 gcccctgcattacccatacctcattcttcacatttcagtcagaagcatcaaaaacatccttgacctttcacatttccgctaaaactttctccattctcac 18430022  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    ||||||||||||||||||||| ||  ||||| |  ||| || |||||| ||||||||| | ||||| ||||||||||||    
T  18430021 ccctccaaaatcatcatcatcaccggcgattttgacgtttttgaagtttctgtgttcggctgtgattaaaggtaacacc 18429943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 2977453 - 2977244
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||| |||||||||||||| |||||||| |||  |||||||||||  ||||| ||||||||||||| ||||||   ||||| ||||||||| |||||    
T  2977453 gagtgaatcatcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtc 2977354  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||| ||||   | | ||||||||||| |||||||  ||||||| | |||||| || ||||   ||| |||||| |||||||  |||| |    
T  2977353 catcaaaaaggtccatccgcccaagtgctccgttagcgatgctgatttgtcgccctgcatgctatgttgtctaatacacgtggcaagaaggaaaccacat 2977254  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  2977253 gttcaaggac 2977244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 51454374 - 51454161
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||||  | ||||||||||||||||| |||| ||  ||  ||||||||||| || ||    
T  51454374 gagtgaaccatcaaattcgtccttgaattttcacggatcggccaaattcattcctcaattatgcgaaatatcaaattagtctttgaatttgtcaaacatc 51454275  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgct----gacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggcc 616  Q
    ||||||||| ||||||| ||  | | | ||||||||||||| |     | ||||| || | |||| |||| |||| | ||| |||||| |||||||||||    
T  51454274 cataaaaaatgtccctctgtccaagtgatccgttagccatgttcatatatatgtccccctgcatgatgtgttgtcttatacacgtggcaagaaggaggcc 51454175  T
Q  617 acgtgttcagggac 630  Q
    ||||||||| ||||    
T  51454174 acgtgttcaaggac 51454161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 40508493 - 40508584
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||||||| ||||| |||||| |||||| ||||||||||||| ||||||| ||||||||||||||    
T  40508493 gagtgaatcatcaacttcgtccctgaattttcacgggtcggacaaattcgtcccttaattatgcgaaatctcaatttaatccctgaatttgt 40508584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 726 - 856
Target Start/End: Complemental strand, 33852500 - 33852370
Alignment:
Q  726 cttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctcca 825  Q
    |||||||||| | |||||||||| ||||||||||||| || ||| |||| |||||||||| ||||||||| || |||||||||||||||||||||| ||     
T  33852500 cttcacatttcagtcagaaacataaaaaacatccttgacttttcacctttccgctaaaactttctccattctcacccctccaaaatcatcatcatcaccg 33852401  T
Q  826 tcgattcttgcgtgttggaagttcctgtgtt 856  Q
     |||||||  ||| || |||||| |||||||    
T  33852400 gcgattctgacgtttttgaagtttctgtgtt 33852370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 421 - 561
Target Start/End: Complemental strand, 39641963 - 39641823
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||||||||||| |||| |||||||| ||| ||||||||||||  || ||||||||| | || | |||| ||  ||| | ||||||||||||||     
T  39641963 gagtgaaccatcaaatttgtccttgaatttttacgggtcggccaaattcatctctcaattattcaaagtatcaacttagtccttaaatttgtcagacgtt 39641864  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatg 561  Q
    ||||||||||||||||||||| | |  ||||||||||||||    
T  39641863 cataaaaaaggtccctccgttcaagtactccgttagccatg 39641823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 1847736 - 1847645
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| ||||||||| |||| |||||||||||| ||||||||||||  |||||||||||||| |||| ||||||| ||||||||||||||    
T  1847736 gagtgaatcatcaaatttgtccttgaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaatttaatccctgaatttgt 1847645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 33111841 - 33111932
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| ||||||||||||||||||||  |||| ||||||  ||||||||||||||||||| ||||||| ||||||||||||||    
T  33111841 gagtgaatcatcaacttcgtccctgaattttcacggctcggtcaaattcatccctcaattatgcgaaatatcaatttaatccctgaatttgt 33111932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 45897050 - 45897141
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| ||||||| |||||||| ||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  45897050 gagtgaatcatcaacttcgtccttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 45897141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 48635464 - 48635373
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| ||||||||||||||||||||  |||| |||||| |||||| ||||||||||||| ||||||| ||||||||||||||    
T  48635464 gagtgaatcatcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 48635373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 729 - 822
Target Start/End: Original strand, 23774455 - 23774548
Alignment:
Q  729 cacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatct 822  Q
    |||||||  ||||||||||| |||||| |||||| |||||||||||||||||||||| ||||||||| || || |||||||| |||||||||||    
T  23774455 cacatttctctcagaaacataaaaaacgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcatcatct 23774548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 723 - 818
Target Start/End: Original strand, 48634183 - 48634278
Alignment:
Q  723 cttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatc 818  Q
    |||| ||||||||  |||| ||||||||||||| |||||| |||||||||||||||||||||| ||||||||| || || |||||||| |||||||    
T  48634183 cttcctcacatttctctcaaaaacatcaaaaacgtccttgactcttctccttcccgctaaaactttctccattctcacctctccaaaaccatcatc 48634278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 412 - 512
Target Start/End: Original strand, 23887189 - 23887289
Alignment:
Q  412 tttaaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttg 511  Q
    |||| ||| ||||||| |||||| ||||||| |||||||| | | |||||| || || |||||||||||||||||||| ||||||| |||||||||||||    
T  23887189 tttataaaagagtgaatcatcaacttcgtccttgaatttttatgggtcggctaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttg 23887288  T
Q  512 t 512  Q
    |    
T  23887289 t 23887289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 420 - 512
Target Start/End: Original strand, 33850981 - 33851073
Alignment:
Q  420 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||||| |||||| ||||| |||||||||||||| ||||| ||| || ||||||||||||| |||||| ||||||| ||| ||||||||||    
T  33850981 ggagtgaatcatcaatttcgttcctgaattttcacgggtcggtcaacttcgtccctcaattatccgaaatatcaatttaatctctgaatttgt 33851073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 701 - 824
Target Start/End: Complemental strand, 2977174 - 2977051
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    ||||||| |||||  || ||| |||| |||||||| ||||||||||||||||||  | | || | ||||| |||||||| ||||| ||||||||| || |    
T  2977174 gcccctgtattactcatacctccttcctcacatttcactcagaaacatcaaaaatgttcgtgacccttcttcttcccgcaaaaaccttctccattctcac 2977075  T
Q  801 ccctccaaaatcatcatcatctcc 824  Q
    | ||||||||||||||||||||||    
T  2977074 ctctccaaaatcatcatcatctcc 2977051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 504 - 630
Target Start/End: Original strand, 1845867 - 1845993
Alignment:
Q  504 tgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtgg 603  Q
    |||||||| ||||||||||| ||||| ||||||||||  | | ||||||||| ||||| ||| |||||||| | |||| |||| |||||| ||| |||||    
T  1845867 tgaatttgacagacgtccatcaaaaacgtccctccgtccaagtgctccgttaaccatgttgatatgtcgccctgcatgatgtgatgtcctatacacgtgg 1845966  T
Q  604 cgagaaggaggccacgtgttcagggac 630  Q
    | | ||||| |||||||||||| ||||    
T  1845967 caaaaaggaagccacgtgttcaaggac 1845993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 726 - 818
Target Start/End: Complemental strand, 45257043 - 45256952
Alignment:
Q  726 cttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatc 818  Q
    |||||||||||| ||| |||||||||||||||||||| |  ||  |||| |||||||||| ||||||||| || |||||||||||||||||||    
T  45257043 cttcacattttagtca-aaacatcaaaaacatccttgaccttttacctttccgctaaaactttctccattctcacccctccaaaatcatcatc 45256952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 701 - 878
Target Start/End: Complemental strand, 45898222 - 45898050
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||  || ||| ||||||||||||    |||| |||||||||||| |||||| | ||||| |||| ||||||||| | ||||||| || |    
T  45898222 gcccctgcattacccatacctccttcttcacatt----tcag-aacatcaaaaacgtccttgacccttcttcttctcgctaaaacttcctccattttcac 45898128  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacac 878  Q
    |||||||||| |||||||||||||  |||||||  | | || ||||||  ||||||||   ||||| |||||||||||    
T  45898127 ccctccaaaaacatcatcatctccggcgattctgacatttttgaagtttgtgtgttcggttgtgattaaaggtaacac 45898050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 744 - 833
Target Start/End: Complemental strand, 23888580 - 23888491
Alignment:
Q  744 aacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctccatcgattct 833  Q
    ||||||||||||  ||||| | ||||| |||| ||||||||| | ||||||| || |||||||||||||||||||||||||  |||||||    
T  23888580 aacatcaaaaacgaccttgacccttcttcttctcgctaaaacttcctccattttcacccctccaaaatcatcatcatctccgacgattct 23888491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 431 - 540
Target Start/End: Complemental strand, 27899215 - 27899106
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    ||||||||||| |||| | |||| |||||||| || ||||  |||||||||||  |||||||||||||||| |    
T  27899215 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccataaaaatg 27899116  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  27899115 gtccctccgt 27899106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 431 - 540
Target Start/End: Complemental strand, 53190893 - 53190784
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |    
T  53190893 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 53190794  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  53190793 gtccctccgt 53190784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 429 - 497
Target Start/End: Original strand, 18428757 - 18428825
Alignment:
Q  429 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaattt 497  Q
    |||||| |||||||||||||||| ||| ||||| ||| || |||||||||||||||||||| |||||||    
T  18428757 catcaacttcgtccctgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaattt 18428825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 2975460 - 2975551
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| || ||||||||||| |||||||| |||  || || |||||  ||||||||| ||||||||| ||||||| ||||||||||||||    
T  2975460 gagtgaatcaccaaattcgtccttgaatttttacggatcagctaaattcatccctcaatgatgcgaaatatcaatttaatccctgaatttgt 2975551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 879
Target Start/End: Complemental strand, 31887274 - 31887118
Alignment:
Q  723 cttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatct 822  Q
    |||| |||||||| ||||| ||| ||||||||| || |||    ||||||||||||||||||| |||||||||  | || ||  ||||||||| ||||||    
T  31887274 cttcctcacatttcactcaaaaatatcaaaaacgtcattgaacattctccttcccgctaaaactttctccattcccacctctataaaatcatcgtcatct 31887175  T
Q  823 ccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    ||  ||||||| |||  || |||||| ||||||||| | |||   ||||||||||||    
T  31887174 ccggcgattctcgcggttttgaagtttctgtgttcggctgtggctaaaggtaacacc 31887118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 458 - 540
Target Start/End: Original strand, 21348760 - 21348842
Alignment:
Q  458 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 540  Q
    ||||||||||| |||| | |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |||||||||||    
T  21348760 tcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 21348842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 435 - 497
Target Start/End: Original strand, 24381758 - 24381820
Alignment:
Q  435 attcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaattt 497  Q
    |||||||| |||||||| |||  |||||||||||  ||||||||||||||||||| |||||||    
T  24381758 attcgtccttgaatttttacggatcggccaaattcatccctcaattatgcgaaatatcaattt 24381820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 470 - 512
Target Start/End: Original strand, 37865433 - 37865475
Alignment:
Q  470 gtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||||||||||||||||| ||||||| ||||||||||||||    
T  37865433 gtccctcaattatgcgaaatatcaatttaatccctgaatttgt 37865475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 540
Target Start/End: Complemental strand, 2226286 - 2226177
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||| ||| |||| |    
T  2226286 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatg 2226187  T
Q  531 gtccctccgt 540  Q
     |||||||||    
T  2226186 ttccctccgt 2226177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 540
Target Start/End: Complemental strand, 30600052 - 30599943
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| | |||||| ||   ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||   ||||||| || |||| |    
T  30600052 tcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgtcgatcaaaatg 30599953  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  30599952 gtccctccgt 30599943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 767 - 824
Target Start/End: Original strand, 54093034 - 54093091
Alignment:
Q  767 ttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctcc 824  Q
    ||||||||||||||||||| |||  |||| || || ||||||||||||||||||||||    
T  54093034 ttctccttcccgctaaaaccttcatcattttcacctctccaaaatcatcatcatctcc 54093091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 33051556 - 33051465
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| ||||||||| ||||| || || ||  ||||| | |||||| |||| ||| |||| |||||||| |||||||||||||    
T  33051556 gagtgaatcatcaacttcgtccctaaatttgcaagcatcaaccaaaatcgtccctaaattttgcaaaatatcaatttcgtccctgaatttgt 33051465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 480
Target Start/End: Original strand, 41944576 - 41944635
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaatt 480  Q
    |||| ||||||||| |||||||||||||||||| |  ||||||||||| ||||| |||||    
T  41944576 gagtaaaccatcaatttcgtccctgaattttcagggatcggccaaattcgtcccccaatt 41944635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 458 - 540
Target Start/End: Complemental strand, 35905819 - 35905737
Alignment:
Q  458 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 540  Q
    |||| |||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||| ||| |||| |||||||||||    
T  35905819 tcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtccctccgt 35905737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 422 - 512
Target Start/End: Original strand, 49494477 - 49494567
Alignment:
Q  422 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||| |||||| ||||||||||||||| || || ||   |||| | |||||  |||| | |||||| ||||||||||||||||||||||    
T  49494477 agtgaatcatcaacttcgtccctgaatttgcaagcatcaatcaaaatcgtccccaaattttacgaaatatcaatttcatccctgaatttgt 49494567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 767 - 824
Target Start/End: Complemental strand, 26449076 - 26449019
Alignment:
Q  767 ttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctcc 824  Q
    |||||||| |||||||||| ||| ||||  || || ||||||||||||||||||||||    
T  26449076 ttctcctttccgctaaaaccttcaccatcttcacctctccaaaatcatcatcatctcc 26449019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 431 - 540
Target Start/End: Original strand, 41977760 - 41977869
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    ||||||||||  |||||| ||||  ||||||| |||| ||  |||||||||||  ||||||||| | |||| |    
T  41977760 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtccgtcaaaatg 41977859  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  41977860 gtccctccgt 41977869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 431 - 540
Target Start/End: Original strand, 51684620 - 51684729
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| ||||||||||    || ||||||||  ||||| |||| ||| |||| || ||||  ||| |||||||  ||||||||||| |||| |    
T  51684620 tcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtccatcaaaatg 51684719  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  51684720 gtccctccgt 51684729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 431 - 540
Target Start/End: Original strand, 54898447 - 54898556
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    |||| |||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||| ||| |||| |    
T  54898447 tcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatg 54898546  T
Q  531 gtccctccgt 540  Q
    ||| ||||||    
T  54898547 gtctctccgt 54898556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 175; Significance: 1e-93; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 175; E-Value: 1e-93
Query Start/End: Original strand, 421 - 631
Target Start/End: Complemental strand, 47269580 - 47269370
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  47269580 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatacgaaatttcaatttcatccctgaatttgtcaaacgtc 47269481  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||  |||| |||||||||||||||||||||| ||||||| |||||||    
T  47269480 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgtctggcatggtgtgctgtcctgtacgcgtggcaagaaggaagccacgt 47269381  T
Q  621 gttcagggacg 631  Q
    |||||||||||    
T  47269380 gttcagggacg 47269370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 701 - 879
Target Start/End: Complemental strand, 47269300 - 47269122
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| || |    
T  47269300 gcccctgcattacatattccttcttcttcacattttactcagaaccatcaaaaacatccttgactcttctccttcccgctaaaacgttctccattttcac 47269201  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    ||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  47269200 ccctccaaaatcatcctcatctccatcgattctggcgtgtttgaagttcctgtgttcgaccgtgatcaaaggtaacacc 47269122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 414 - 631
Target Start/End: Original strand, 27940601 - 27940818
Alignment:
Q  414 taaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtc 513  Q
    |||||| |||||||||||||| || ||||||||||||||||  || || |||||| |||||||||||||||||||| ||||||| |||| ||||||| ||    
T  27940601 taaaaacgagtgaaccatcaatttagtccctgaattttcacaggttggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttatc 27940700  T
Q  514 agacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggag 613  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| |||| ||||||||| |||||||||||| |||||||     
T  27940701 agacgtccatcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtaaccttgcatgatgtgctgtcttgtacgcgtggcaagaaggaa 27940800  T
Q  614 gccacgtgttcagggacg 631  Q
    ||||||||||||||||||    
T  27940801 gccacgtgttcagggacg 27940818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 415 - 631
Target Start/End: Complemental strand, 36895640 - 36895424
Alignment:
Q  415 aaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtca 514  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| ||| || |||| ||||||||||||||| |||| ||  |||||||||||||||    
T  36895640 aaaaatgagtgaaccatcaaatttgtccctgaattttcacgcgtcggtcaacttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtca 36895541  T
Q  515 gacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggagg 614  Q
    ||||||||| |||||||||||| |||  | | |||||||||||||||||||  ||||| ||| |||| |||| |||| |||||||||||| ||||||| |    
T  36895540 gacgtccatcaaaaaggtcccttcgtccaagtgctccgttagccatgctgatctgtcgtcttgcatgttgtgttgtcttgtacgcgtggcaagaaggaag 36895441  T
Q  615 ccacgtgttcagggacg 631  Q
    |||||||||||||||||    
T  36895440 ccacgtgttcagggacg 36895424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 421 - 631
Target Start/End: Complemental strand, 46638931 - 46638721
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||  ||||||||||||||||||| |||| ||  ||| |||||||||||||||||    
T  46638931 gagtgaaccatcaaattcgttcctgaattttcacgcgtcggccaacttcatccctcaattatgcgaaatatcaacttagtccttgaatttgtcagacgtc 46638832  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||  ||||||||||||||||  | | |||||||||||||||||||  ||||||||| |||| |||| |||| |||||||||||| | ||||| |||||||    
T  46638831 caccaaaaaggtccctccgtccaagtgctccgttagccatgctgatctgtcgccttgcatgttgtgttgtcttgtacgcgtggcaaaaaggaagccacgt 46638732  T
Q  621 gttcagggacg 631  Q
    |||||||||||    
T  46638731 gttcagggacg 46638721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 421 - 630
Target Start/End: Original strand, 42134482 - 42134691
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||| |  ||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  42134482 gagtgaaccatcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 42134581  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||||  | | ||||||||||||||| ||||||||| || | ||||||||| |||| ||||| |||||| ||||||| ||||| |    
T  42134582 catcaaaaaggtccctccgtccaagtgctccgttagccatgttgacatgtcaccctgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacat 42134681  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  42134682 gttcaaggac 42134691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 421 - 631
Target Start/End: Original strand, 31801633 - 31801843
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||| ||| ||||||||||||||| ||||||||| |||||| ||| || |||||||||||||||||||| |||| ||  ||| | ||||||| |||||||    
T  31801633 gagtaaacaatcaaattcgtccctaaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtccttaaatttgtgagacgtc 31801732  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||||  | | |||||||||||||||||||  ||||| ||| |||| |||| |||| |||||||||||| ||||||| | |||||    
T  31801733 catcaaaaaggtccctccgtccaagtgctccgttagccatgctgatttgtcgtcttgcatgttgtgttgtcttgtacgcgtggcaagaaggaagtcacgt 31801832  T
Q  621 gttcagggacg 631  Q
    |||||||||||    
T  31801833 gttcagggacg 31801843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 421 - 625
Target Start/End: Original strand, 44157433 - 44157637
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||||||||| |||||| | |||||||||| ||||||||||||  |||||||||||||| |||| |||| ||  ||||||||||||| |||||||    
T  44157433 gagtgaaccatcaaactcgtccttaaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgttagacgtc 44157532  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||||||||| |||| |||||  | | ||||||| ||||||  |||||||||||| | |||| |||| |||| ||||| |||||| ||||||| |||||||    
T  44157533 cataaaaaaagtccttccgtctaagtgctccgtcagccatagtgacatgtcgccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgt 44157632  T
Q  621 gttca 625  Q
    |||||    
T  44157633 gttca 44157637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 420 - 630
Target Start/End: Complemental strand, 35480100 - 35479891
Alignment:
Q  420 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgt 519  Q
    ||||||||||||||| ||||||| ||||||||||||  || ||||||||  ||||||||||||||||||| |||| || |||  ||||||||||||||||    
T  35480100 ggagtgaaccatcaacttcgtccttgaattttcacggatcagccaaattcatccctcaattatgcgaaatatcaacttaatctatgaatttgtcagacgt 35480001  T
Q  520 ccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacg 619  Q
    |||| |||||||||| |||||  | | |||| ||||| ||||||||  ||||||| | |||||| || |||| |||||||||||| |||| || ||||||    
T  35480000 ccatcaaaaaggtccttccgtccaagtgctctgttag-catgctgatctgtcgccatgcatgctttgttgtcttgtacgcgtggcaagaaagaagccacg 35479902  T
Q  620 tgttcagggac 630  Q
    |||||||||||    
T  35479901 tgttcagggac 35479891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 702 - 798
Target Start/End: Original strand, 27940889 - 27940985
Alignment:
Q  702 cccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtc 798  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  27940889 cccctgcattacatattcctccttcttcacattttactcagaaacatcaaaaacatcattgactcttctccttcccgctaaaacgttctccattgtc 27940985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 47264124 - 47264215
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47264124 gagtgaaccatcaagttagtccctgaattttcacgcgtcggccaatttagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 47264215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 471 - 630
Target Start/End: Complemental strand, 45381058 - 45380899
Alignment:
Q  471 tccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgt 570  Q
    ||||||||||||||||||| |||| ||  | | |||||||||||||||||||| |||||||| |||||||  | | ||||||||||||||| ||||||||    
T  45381058 tccctcaattatgcgaaatatcaacttagttcatgaatttgtcagacgtccatcaaaaaggttcctccgtccaagtgctccgttagccatggtgacatgt 45380959  T
Q  571 cgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgtgttcagggac 630  Q
    |||| | ||||||||| |||| ||||| |||||| ||||||| |||||||||||| ||||    
T  45380958 cgccctgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggac 45380899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 33685372 - 33685164
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||||  ||||||||||||||||||| ||||||| |||  ||||||||||| |  ||    
T  33685372 gagtgaaccatcaaattcgtccctgaatttttacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttaatcattgaatttgtcacatctc 33685273  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    |||  ||||| ||||||| |  | | |||||||||||||||| ||  ||||||| | |||| || | |||| ||||| |||||| ||||||| |||||||    
T  33685272 cat-caaaagatccctccatccaagtgctccgttagccatgccgatgtgtcgccctgcatgttgagttgtcttgtacacgtggcaagaaggaagccacgt 33685174  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  33685173 gttcaaggac 33685164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 730 - 879
Target Start/End: Complemental strand, 18183765 - 18183616
Alignment:
Q  730 acattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctccatcga 829  Q
    |||||| ||||||||||||||||||| || ||| | |||||||||||||||||||| ||||||||| || || ||||||||||||||||||||||  |||    
T  18183765 acatttcactcagaaacatcaaaaacgtcattgacccttctccttcccgctaaaactttctccattctcacctctccaaaatcatcatcatctccggcga 18183666  T
Q  830 ttcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    ||||  ||| || |||||| ||||||||| | ||| | ||||||||||||    
T  18183665 ttctcacgtttttgaagtttctgtgttcggctgtggttaaaggtaacacc 18183616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 18184067 - 18183859
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||  |||||||| |||  ||||||||| |  ||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  18184067 gagtgaaccatcaaattcgtctttgaatttttacggttcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 18183968  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||| |||||| | | || | |||||||||||||||||||  ||||| |   |||| |||| |||| ||||| |||||| | || || |||||||    
T  18183967 catcaaaaatgtcccttcatcaa-gtgctccgttagccatgctgatttgtcgtccagcatgttgtgttgtcttgtacacgtggcaaaaaagaagccacgt 18183869  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  18183868 gttcaaggac 18183859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 421 - 510
Target Start/End: Original strand, 35478087 - 35478176
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaattt 510  Q
    ||||||| |||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  35478087 gagtgaatcatcaacttcatccctgaattttcacgggtcggccaaattagtccctcaattatgcaaaatatcaatttaatccctgaattt 35478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 415 - 512
Target Start/End: Original strand, 45379079 - 45379176
Alignment:
Q  415 aaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||||||||| |||||| |||||||||||||||||||| ||||||||| || |||||| ||||||||||||| ||||||| |||||| |||||||    
T  45379079 aaaaaggagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctaaatttgt 45379176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 723 - 876
Target Start/End: Complemental strand, 45380805 - 45380652
Alignment:
Q  723 cttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatct 822  Q
    ||||||||||||| | |||||||||||||||||||||||| |  ||| | || |||||||||| ||||||||| || ||||||||||||||||||||||     
T  45380805 cttcttcacatttcagtcagaaacatcaaaaacatccttgacctttcacatttccgctaaaactttctccattctcacccctccaaaatcatcatcatca 45380706  T
Q  823 ccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaac 876  Q
    ||  |||||||  ||| || ||||||  |||||||| | ||||| |||||||||    
T  45380705 ccggcgattctgacgtttttgaagtttatgtgttcggctgtgattaaaggtaac 45380652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 416 - 512
Target Start/End: Complemental strand, 31803796 - 31803700
Alignment:
Q  416 aaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||| ||||||| |||||| |||||||||||||||||||| ||||||||| || |||| ||||||||||||||| ||||||| ||||||||||||||    
T  31803796 aaaatgagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgt 31803700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 5784958 - 5784867
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||||||| ||||| ||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  5784958 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 5784867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 11152545 - 11152636
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||| || |||||||||||||||||||| ||||||| ||||| ||||||||    
T  11152545 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgt 11152636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 419 - 512
Target Start/End: Complemental strand, 27952593 - 27952500
Alignment:
Q  419 aggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||| || |||||| || ||||||||||| ||||| |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  27952593 aggagttaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 27952500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 703 - 824
Target Start/End: Original strand, 6575448 - 6575569
Alignment:
Q  703 ccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccccc 802  Q
    |||||||||||  || ||| ||||||||||||| | | ||||| || |||||| |||||| | |||||||||||| ||||||| || |||||| || |||    
T  6575448 ccctgcattacccatacctccttcttcacatttcagttagaaaaataaaaaacgtccttgacccttctccttcccactaaaactttatccattctcaccc 6575547  T
Q  803 ctccaaaatcatcatcatctcc 824  Q
    ||||||||||||||||||||||    
T  6575548 ctccaaaatcatcatcatctcc 6575569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 724 - 879
Target Start/End: Original strand, 42134782 - 42134937
Alignment:
Q  724 ttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctc 823  Q
    |||||||||||| | |||||||||||||||||||||||| |  |||  ||| |||||||||| ||||||||| || |||||||||||||||||| |||      
T  42134782 ttcttcacatttcagtcagaaacatcaaaaacatccttgacctttcatctttccgctaaaactttctccattctcacccctccaaaatcatcataatcat 42134881  T
Q  824 catcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    |  |||||||  ||| || ||||||  ||||||||   ||||| ||||||||||||    
T  42134882 cggcgattctgacgtttttgaagtttatgtgttcggatgtgattaaaggtaacacc 42134937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 500 - 630
Target Start/End: Original strand, 6575271 - 6575399
Alignment:
Q  500 tccctgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgc 599  Q
    |||||||||||||||||| || || |||||||||| ||||| || | |||| ||  |||||||||| |||||| | | |||||| || |||| |||||||    
T  6575271 tccctgaatttgtcagacatctatcaaaaaggtccttccgtcaaagtgctctgt--gccatgctgatatgtcgtcatgcatgctttgttgtcttgtacgc 6575368  T
Q  600 gtggcgagaaggaggccacgtgttcagggac 630  Q
    ||||| ||||||| |||||||||||| ||||    
T  6575369 gtggcaagaaggaagccacgtgttcaaggac 6575399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 18180500 - 18180591
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| | |||| || |||||||||||||||||  |||||||||||  ||||||||||||||||||| ||||||| || |||||||||||    
T  18180500 gagtgaatcctcaactttgtccctgaattttcacgactcggccaaattcatccctcaattatgcgaaatatcaatttaattcctgaatttgt 18180591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 33679259 - 33679350
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| || |||| |||||||| ||| ||| |||||||| |||||||||||||||||||| ||||||| |||| |||||||||    
T  33679259 gagtgaatcatcaattttgtccatgaatttttacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttgt 33679350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 422 - 510
Target Start/End: Complemental strand, 6577195 - 6577107
Alignment:
Q  422 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaattt 510  Q
    |||||| |||||| |||||||||||  ||| | | |||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  6577195 agtgaatcatcaacttcgtccctgacattttatgggtcggctaaattagtccttcaattatgcgaaatatcaatttaatccctgaattt 6577107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 726 - 876
Target Start/End: Original strand, 44158088 - 44158238
Alignment:
Q  726 cttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctcca 825  Q
    |||||||||| | |||||||||||||||||||||||| |  ||| |||| |  ||||||| ||||||||| || ||| | |||||||||||||||| ||     
T  44158088 cttcacatttcagtcagaaacatcaaaaacatccttgacctttcacctttctactaaaactttctccattctcaccctttcaaaatcatcatcatcaccg 44158187  T
Q  826 tcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaac 876  Q
     |||||||  | | || ||||||  |||||||| | ||||| |||||||||    
T  44158188 gcgattctgacttttttgaagtttatgtgttcggctgtgattaaaggtaac 44158238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 422 - 512
Target Start/End: Original strand, 46636766 - 46636856
Alignment:
Q  422 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||| |||||| |||||| ||||||||||||| |||||| || || |||| ||||||||||||||| ||||||| ||  ||||||||||    
T  46636766 agtgaatcatcaacttcgtctctgaattttcacgggtcggctaacttcgtccttcaattatgcgaaatatcaatttaatttctgaatttgt 46636856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 744 - 879
Target Start/End: Original strand, 31801950 - 31802085
Alignment:
Q  744 aacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctccatcgattcttgcgtgttgg 843  Q
    |||||||||||| || ||| | ||||| |||| ||||||||| | ||||| | || | |||||||||||||||||||||||  |||||||  | | || |    
T  31801950 aacatcaaaaacgtcattgacccttcttcttctcgctaaaacttcctccactttcactcctccaaaatcatcatcatctccggcgattctgacatttttg 31802049  T
Q  844 aagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    |||||  |||||||| | ||||| ||||||||||||    
T  31802050 aagtttgtgtgttcggctgtgattaaaggtaacacc 31802085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 723 - 822
Target Start/End: Complemental strand, 35479794 - 35479695
Alignment:
Q  723 cttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatct 822  Q
    |||||||| |||| | ||||||| || |||||| |||||| | |||||||||||| ||||||| || | |||| || || ||||||||||||||||||||    
T  35479794 cttcttcatatttcagtcagaaaaataaaaaacgtccttgacccttctccttcccactaaaactttattcattctcgcctctccaaaatcatcatcatct 35479695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 44159385 - 44159294
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||||||   |||| ||| || |||||| |||||||| |||| ||||||| || |||||||||||    
T  44159385 gagtgaatcatcaacttcgtccctgaattttcacagatcggtcaatttcgtcccttaattatgcaaaatatcaatttaattcctgaatttgt 44159294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 744 - 878
Target Start/End: Complemental strand, 46638614 - 46638480
Alignment:
Q  744 aacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctccatcgattcttgcgtgttgg 843  Q
    |||||||||||| || ||| | ||||| |||  ||||||||| | ||||||| || ||||||||||||||||||||||| |  |||||||  | | || |    
T  46638614 aacatcaaaaacgtctttgacccttcttcttttcgctaaaacttcctccattttcacccctccaaaatcatcatcatcttcgacgattctgacatttttg 46638515  T
Q  844 aagttcctgtgttcgaccgtgatcaaaggtaacac 878  Q
    |||||  |||||||| | ||||| |||||||||||    
T  46638514 aagtttgtgtgttcggctgtgattaaaggtaacac 46638480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 431 - 540
Target Start/End: Complemental strand, 4856080 - 4855971
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    ||||||||||  |||||| |||| |||||||| |||| ||  |||||||||||  ||||||||||| |||| |    
T  4856080 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatg 4855981  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  4855980 gtccctccgt 4855971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 540
Target Start/End: Original strand, 2869589 - 2869698
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| ||||||||||    |||| |||||| |||||| |||| |||||||| || ||||  || || |||||  ||||||||||| |||| |    
T  2869589 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtccatcaaaatg 2869688  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  2869689 gtccctccgt 2869698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 415 - 468
Target Start/End: Original strand, 5783358 - 5783411
Alignment:
Q  415 aaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaatt 468  Q
    ||||| |||||||||||||| |||||||||||||||| | | ||||||||||||    
T  5783358 aaaaacgagtgaaccatcaatttcgtccctgaatttttaggggtcggccaaatt 5783411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 540
Target Start/End: Complemental strand, 34778252 - 34778143
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    ||||||||||  |||||| |||| |||||||| |||| ||  |||||||||||  |||| |||||| |||| |    
T  34778252 tcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtccatcaaaatg 34778153  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  34778152 gtccctccgt 34778143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 429 - 490
Target Start/End: Original strand, 36894830 - 36894891
Alignment:
Q  429 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatt 490  Q
    |||||| |||||||||||||||| ||| ||||||||| || |||  ||||||||||||||||    
T  36894830 catcaacttcgtccctgaatttttacgggtcggccaacttcgtcattcaattatgcgaaatt 36894891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 458 - 534
Target Start/End: Complemental strand, 31238582 - 31238506
Alignment:
Q  458 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtcc 534  Q
    ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |||||    
T  31238582 tcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcc 31238506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 800 - 876
Target Start/End: Complemental strand, 33682974 - 33682898
Alignment:
Q  800 cccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaac 876  Q
    ||||| |||||||||||||||||||  ||||| |  ||| || |||||| ||||||||||| ||||| |||||||||    
T  33682974 ccccttcaaaatcatcatcatctccggcgattatgacgtttttgaagtttctgtgttcgactgtgattaaaggtaac 33682898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 701 - 833
Target Start/End: Complemental strand, 36895356 - 36895229
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||  || ||| ||||||||||||| ||     |||||||||||| || |||   ||||| |||| |||||||||   ||||||| ||      
T  36895356 gcccctgcattacccatacctccttcttcacatttcac-----aacatcaaaaacgtcattgatccttcttcttctcgctaaaactacctccattttcat 36895262  T
Q  801 ccctccaaaatcatcatcatctccatcgattct 833  Q
    ||||||||||||||||||||||||  |||||||    
T  36895261 ccctccaaaatcatcatcatctccgacgattct 36895229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 420 - 512
Target Start/End: Complemental strand, 42136336 - 42136244
Alignment:
Q  420 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||||| |||||| ||||| ||| |||||| | |  |||| ||| || |||| | ||||||||||||| ||||||| ||||||||||||||    
T  42136336 ggagtgaatcatcaacttcgttcctaaatttttatggatcggtcaacttcgtcctttaattatgcgaaatatcaatttaatccctgaatttgt 42136244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 540
Target Start/End: Original strand, 51121905 - 51122024
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||| |||||| ||||||| ||||||| || || || |||||  | || ||  |||| ||| |||| |||||||| ||||||||||| ||  |||||    
T  51121905 gagtgaatcatcaacttcgtccttgaatttgcaagcatcagccaacatcgttcccaaattttgcaaaatatcaatttcgtccctgaatttctctcacgtc 51122004  T
Q  521 cataaaaaaggtccctccgt 540  Q
    ||| |||| |||||||||||    
T  51122005 catcaaaatggtccctccgt 51122024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 431 - 525
Target Start/End: Complemental strand, 25279067 - 25278973
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataa 525  Q
    |||||||||||| ||||||||||    || |||||||| || ||| |||| |||||||| || ||||  |||||||||||  |||||||||||||    
T  25279067 tcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttacagacgtccataa 25278973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 9e-82; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 421 - 631
Target Start/End: Complemental strand, 8423405 - 8423195
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| || ||||||||||||||||| ||| |||||||| |||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  8423405 gagtgaaccatcaatttagtccctgaattttcacgggtcagccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtc 8423306  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
     || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| |||||||    
T  8423305 aatcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgccttgcatgctgtgctgtcttgtacgcgtggcaagaaggaagccacgt 8423206  T
Q  621 gttcagggacg 631  Q
    |||||||||||    
T  8423205 gttcagggacg 8423195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 411 - 631
Target Start/End: Complemental strand, 35344423 - 35344204
Alignment:
Q  411 ttttaaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaattt 510  Q
    |||||||||| ||||||||||||| || ||||| ||||||||||| ||| |||||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  35344423 ttttaaaaag-agtgaaccatcaatttagtccccgaattttcacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 35344325  T
Q  511 gtcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaag 610  Q
     | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| |||||    
T  35344324 ataagacgtccatcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgttgccttgcatgctgtgctgtcttgtacgcgtggcaagaag 35344225  T
Q  611 gaggccacgtgttcagggacg 631  Q
    || ||||||||||||||||||    
T  35344224 gaagccacgtgttcagggacg 35344204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 421 - 631
Target Start/End: Complemental strand, 46996826 - 46996616
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||| ||  || ||||||||||||||||||    
T  46996826 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtc 46996727  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||||  | | ||||||||||| |||||||  ||||||||| ||||||||| |||| |||||||||||| ||||||| |||||||    
T  46996726 catcaaaaaggtccctccgtccaagtgctccgttagcgatgctgatctgtcgccttgcatgctgtgttgtcttgtacgcgtggcaagaaggaagccacgt 46996627  T
Q  621 gttcagggacg 631  Q
    ||||| |||||    
T  46996626 gttcaaggacg 46996616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 701 - 831
Target Start/End: Complemental strand, 8423125 - 8422995
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||      
T  8423125 gcccctgcattacatattcctccttcttcacattttactcagaaacatcaaaaacatccttgactcttctccttcccgctaaaacgttctccattgtcat 8423026  T
Q  801 ccctccaaaatcatcatcatctccatcgatt 831  Q
    |||||||||||||||||||||||||| ||||    
T  8423025 ccctccaaaatcatcatcatctccattgatt 8422995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 701 - 831
Target Start/End: Complemental strand, 35344134 - 35344004
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  35344134 gcccctgcattacatattcctccttcttcacattttactcagaaacatcaaaaacatccttaactcttctccttcccgctaaaacgttctccattgtcac 35344035  T
Q  801 ccctccaaaatcatcatcatctccatcgatt 831  Q
    |||||||||||||||||||||||||| ||||    
T  35344034 ccctccaaaatcatcatcatctccattgatt 35344004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 46812706 - 46812497
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| ||||||| |||||||| ||| ||||||||||||  ||||||||||| | ||||| |||||||  ||||| |||||||||||||||    
T  46812706 gagtgaaccatcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacgtc 46812607  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||  |||||  | | |||| |||||||||||||| |||||||| | ||||||||| |||| |||||| ||||| ||||||| |||||||    
T  46812606 catcaaaaaggtcattccgtccaagtgctctgttagccatgctgatatgtcgccctgcatgctgtgttgtcttgtacgtgtggcaagaaggaagccacgt 46812507  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  46812506 gttcaaggac 46812497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 47341810 - 47341597
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||||||| |||| ||  ||||||||||||||||||||     
T  47341810 gagtgaaccatcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtt 47341711  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgc----ctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggcc 616  Q
     || ||||||||  ||||||  | | |||||||||||||||  ||||||||||    | | ||||||||| |||| ||||| |||||| ||||||| |||    
T  47341710 aatcaaaaaggtatctccgtccaagtgctccgttagccatggggacatgtcgccctgcatgcatgctgtgttgtcttgtacacgtggcaagaaggaagcc 47341611  T
Q  617 acgtgttcagggac 630  Q
    ||||||||| ||||    
T  47341610 acgtgttcaaggac 47341597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 421 - 624
Target Start/End: Original strand, 23953805 - 23954008
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||| | |||||| ||| |||||  ||||| |||| ||||||||||||||| |||| ||  ||| |||||||||||||||||    
T  23953805 gagtgaaccatcaaattcgtccttaaatttttacgggtcggtaaaattcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgtcagacgtc 23953904  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
     || ||||||||||||||||  | | ||||||||||||||||||| |||||||| | |||| |||| |||| ||||| |||||| | ||||| |||||||    
T  23953905 aatcaaaaaggtccctccgtccaagtgctccgttagccatgctgatatgtcgccatgcatgttgtgttgtcttgtacacgtggcaaaaaggaagccacgt 23954004  T
Q  621 gttc 624  Q
    ||||    
T  23954005 gttc 23954008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 421 - 534
Target Start/End: Complemental strand, 38613605 - 38613492
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||| | |||||||||| ||||||||||||  ||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  38613605 gagtgaaccatcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 38613506  T
Q  521 cataaaaaaggtcc 534  Q
    ||||||||| ||||    
T  38613505 cataaaaaatgtcc 38613492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 418 - 630
Target Start/End: Original strand, 2167476 - 2167688
Alignment:
Q  418 aaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagac 517  Q
    |||||||||||||||||||  |||| ||||||   ||| ||||| ||||||  ||||||||||||||||||| |||| ||  ||||||||||||||||||    
T  2167476 aaggagtgaaccatcaaatatgtccttgaattagtacgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagac 2167575  T
Q  518 gtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggcca 617  Q
    | |||| ||||||||||||||||  | | ||||| |||||||||||||| |||| || | |||| |||| |||| ||||| |||||| | ||| | ||||    
T  2167576 gcccatcaaaaaggtccctccgtccaagtgctccattagccatgctgacgtgtcaccctgcatgatgtgttgtcttgtacacgtggcaaaaagaaagcca 2167675  T
Q  618 cgtgttcagggac 630  Q
    || ||||| ||||    
T  2167676 cgcgttcaaggac 2167688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 406 - 512
Target Start/End: Original strand, 35342410 - 35342516
Alignment:
Q  406 cttagttttaaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctg 505  Q
    ||||||||| |||||||||||| |||||| || ||||||||||| | ||| |||||||||||| |||||||||||||||||||| ||||||| |||||||    
T  35342410 cttagtttttaaaaggagtgaatcatcaacttagtccctgaattattacgggtcggccaaatttgtccctcaattatgcgaaatatcaatttaatccctg 35342509  T
Q  506 aatttgt 512  Q
    |||||||    
T  35342510 aatttgt 35342516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 33038921 - 33038712
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||| |||||||||||||| |||||||| | | ||||| ||||||  ||||||||||||||||||| |||| ||  ||||||||||| |||||||||    
T  33038921 gagtgaatcatcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtc 33038822  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||||  | | |||| ||||| |||| |||  ||||| | | |||| |||| |||| | ||| |||| | ||||||| |||| ||    
T  33038821 catcaaaaaggtccctccgtccaagtgctctgttaggcatgttgatctgtcgtcctgcatgttgtgttgtcttatacacgtgtcaagaaggaagccatgt 33038722  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  33038721 gttcaaggac 33038712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 423 - 512
Target Start/End: Original strand, 46810707 - 46810796
Alignment:
Q  423 gtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  46810707 gtgaatcatcaacttcgtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaatttaatccctgaatttgt 46810796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 701 - 858
Target Start/End: Complemental strand, 46812427 - 46812270
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||  || |||  |||||||||||| | |||||||||||||||||  ||||| |  ||||||||||| ||||||| ||||||||| || |    
T  46812427 gcccctgcattactcatacctcattcttcacatttcagtcagaaacatcaaaaacgaccttgacctttctccttcccactaaaactttctccattctcac 46812328  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcg 858  Q
    ||||||||||||||||||||||||  |||||||  ||| || |||||| |||||||||    
T  46812327 ccctccaaaatcatcatcatctccgacgattctgacgtttttgaagtttctgtgttcg 46812270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 701 - 833
Target Start/End: Complemental strand, 33038650 - 33038518
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||| | || ||| ||||||||||||| ||||||||||||||||||| || ||  | |||| ||||||||||||||| |||||||||  | |    
T  33038650 gcccctgcattatacatacctccttcttcacatttcactcagaaacatcaaaaacgtcattaacccttccccttcccgctaaaactttctccattcccac 33038551  T
Q  801 ccctccaaaatcatcatcatctccatcgattct 833  Q
    ||||||||||||||||||||||||  |||||||    
T  33038550 ccctccaaaatcatcatcatctccggcgattct 33038518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 701 - 822
Target Start/End: Original strand, 40784626 - 40784747
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||  || ||| ||||||||||||| ||| |||||||| ||||| ||| ||| | |||||||||||||||||||| ||||||||| || |    
T  40784626 gcccctgcattactcatacctccttcttcacatttcacttagaaacataaaaaatatcattgacccttctccttcccgctaaaactttctccattctcac 40784725  T
Q  801 ccctccaaaatcatcatcatct 822  Q
    |||||||||||||||| |||||    
T  40784726 ccctccaaaatcatcaccatct 40784747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 421 - 565
Target Start/End: Complemental strand, 38615035 - 38614892
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||| |||||||||||||| | |||||||||| ||||  ||||||  ||||||||||||||||||| | || ||  |||||||||||||||||||||    
T  38615035 gagtgaaacatcaaattcgtccttaaattttcacgggtcgatcaaattcatccctcaattatgcgaaatattaacttagtccctgaatttgtcagacgtc 38614936  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctga 565  Q
    |||| |||| ||||||||||  | | |||| ||||||||||||||    
T  38614935 cata-aaaatgtccctccgtctaagtgctctgttagccatgctga 38614892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 4321038 - 4321129
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||| || |||||| ||||||||||||| ||||||| ||||||||||||||    
T  4321038 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 4321129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 8421416 - 8421507
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| || ||||||||||| ||||| |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  8421416 gagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 8421507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 30108565 - 30108656
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  30108565 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 30108656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 46994660 - 46994751
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||| || |||| ||||||||||||||| ||||||| ||||||||||||||    
T  46994660 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaatccctgaatttgt 46994751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 416 - 630
Target Start/End: Original strand, 2492322 - 2492535
Alignment:
Q  416 aaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcag 515  Q
    |||| |||| |||||||||||||||||  ||||||| ||| ||||| |||| |  ||| ||||||||||||||| |||| || || | ||||||| |||     
T  2492322 aaaaagagtaaaccatcaaattcgtcctcgaatttttacgggtcggtcaaaattatccttcaattatgcgaaatatcaacttaatacttgaatttttcaa 2492421  T
Q  516 acgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggc 615  Q
    |||||||||||||| || |||||||| | | ||||||||||||||| |||  | |||||   |||||| ||||||| ||||| |||||| | ||||| |     
T  2492422 acgtccataaaaaa-gttcctccgttcaagtgctccgttagccatgttgatctatcgcccaacatgctctgctgtcttgtacacgtggcaaaaaggaagt 2492520  T
Q  616 cacgtgttcagggac 630  Q
    |||||||||| ||||    
T  2492521 cacgtgttcaaggac 2492535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 701 - 833
Target Start/End: Original strand, 2167753 - 2167885
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    ||||||| |||||  || ||| |||| |||||||| | ||||||||||||||||| || ||| | |||||||||||||||||||| ||||||||| || |    
T  2167753 gcccctgtattacccatacctccttcctcacatttcaatcagaaacatcaaaaacgtctttgacccttctccttcccgctaaaactttctccattctcac 2167852  T
Q  801 ccctccaaaatcatcatcatctccatcgattct 833  Q
    | ||||||||||||| ||||||||  |||||||    
T  2167853 ctctccaaaatcatcttcatctccggcgattct 2167885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 421 - 540
Target Start/End: Original strand, 40784346 - 40784465
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||| | |||||||| ||||||| || |||||  ||| ||||||||||||||| |||| ||  ||  |||||||||||||| ||    
T  40784346 gagtgaaccatcaaattcgttcttgaatttttacgcgtcagctaaattcatccttcaattatgcgaaatatcaacttagtctttgaatttgtcagacatc 40784445  T
Q  521 cataaaaaaggtccctccgt 540  Q
    ||| ||||||||||||||||    
T  40784446 catcaaaaaggtccctccgt 40784465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 420 - 630
Target Start/End: Original strand, 27955369 - 27955579
Alignment:
Q  420 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgt 519  Q
    |||||||| |||||||||||||| |||||||| |||  || || |||||  |||||||||| | |||||| |||| || ||  |||||||||||||||||    
T  27955369 ggagtgaatcatcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgt 27955468  T
Q  520 ccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacg 619  Q
    |||| ||| ||||||||||||  | | |||||||||| ||||||||  |||||   | |||| |||| |||| ||||| | |||| | ||||| |||| |    
T  27955469 ccatcaaagaggtccctccgtccaagtgctccgttagtcatgctgatgtgtcgtgctgcatgttgtgttgtcttgtacacttggcaacaaggaagccatg 27955568  T
Q  620 tgttcagggac 630  Q
    |||||| ||||    
T  27955569 tgttcaaggac 27955579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 701 - 819
Target Start/End: Complemental strand, 47341534 - 47341416
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||  || ||| ||||||||||||| | | |||||||||||||||||||||| |  ||| |||| |||||||||| |||| |||| || |    
T  47341534 gcccctgcattacccatacctccttcttcacatttcagtgagaaacatcaaaaacatccttgacatttcacctttccgctaaaactttcttcattctcac 47341435  T
Q  801 ccctccaaaatcatcatca 819  Q
    |||||||||||||||||||    
T  47341434 ccctccaaaatcatcatca 47341416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 728 - 825
Target Start/End: Original strand, 38613771 - 38613868
Alignment:
Q  728 tcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctcca 825  Q
    |||||||| ||||||||||||||||||  || ||| | |||||||||||||||||||| ||||| ||| || || |||||||||||||||||||||||    
T  38613771 tcacatttcactcagaaacatcaaaaatgtcattgacccttctccttcccgctaaaactttctctattctcacctctccaaaatcatcatcatctcca 38613868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 429 - 512
Target Start/End: Complemental strand, 36762763 - 36762680
Alignment:
Q  429 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||| |||||||||||||||| |||  |||||||||||||||||||||||||| ||||| ||||||| | ||||||||||||    
T  36762763 catcaacttcgtccctgaatttttacggatcggccaaattagtccctcaattatgtgaaatatcaatttaacccctgaatttgt 36762680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 45465275 - 45465184
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| ||||||| |||||||| ||| ||||| ||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  45465275 gagtgaatcatcaacttcgtccttgaatttttacgggtcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 45465184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 40785639 - 40785548
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| ||||||| |||||||||||| ||||||||||||  || |||||||||| ||||| ||||| | ||||||||||||||    
T  40785639 gagtgaatcatcaatttcgtccttgaattttcacgggtcggccaaattcatctctcaattatgtgaaatatcaatctaatccctgaatttgt 40785548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 701 - 823
Target Start/End: Original strand, 23954085 - 23954207
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    ||||||| |||||  || ||| |||| ||||||||   ||| |||||| |||||| |||||| |||||||||| || |||||||| ||||||||| || |    
T  23954085 gcccctgtattacccatacctccttcctcacatttctttcataaacataaaaaacgtccttgactcttctcctacctgctaaaactttctccattctcac 23954184  T
Q  801 ccctccaaaatcatcatcatctc 823  Q
    | |||||||||||||||||||||    
T  23954185 ctctccaaaatcatcatcatctc 23954207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 422 - 512
Target Start/End: Complemental strand, 36756973 - 36756883
Alignment:
Q  422 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||| |||||| ||||| |||||||||||| |  |||| ||||||||||||||||||||| ||||| ||||||| ||| ||||||||||    
T  36756973 agtgaatcatcaacttcgttcctgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaatttaatcgctgaatttgt 36756883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 422 - 512
Target Start/End: Complemental strand, 36766497 - 36766407
Alignment:
Q  422 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||| |||||| ||||| |||||||||||| |  |||| ||||||||||||||||||||| ||||| ||||||| ||| ||||||||||    
T  36766497 agtgaatcatcaacttcgttcctgaattttcatggatcggtcaaattagtccctcaattatgtgaaatatcaatttaatcgctgaatttgt 36766407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 421 - 510
Target Start/End: Original strand, 33775408 - 33775497
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaattt 510  Q
    ||||||| | |||| |||||||||||||||| ||| ||||| ||| || |||| ||||||||||||||| ||||||| ||||||||||||    
T  33775408 gagtgaatcgtcaacttcgtccctgaatttttacgggtcggtcaacttcgtccttcaattatgcgaaatatcaatttaatccctgaattt 33775497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 744 - 879
Target Start/End: Complemental strand, 46996512 - 46996374
Alignment:
Q  744 aacatcaaaaacatccttggc---tcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctccatcgattcttgcgtgt 840  Q
    |||||||||||| |||||| |   |||||| |||| ||||||||| | ||||||| || |||||||||||||||||||||||||  |||||||  | | |    
T  46996512 aacatcaaaaacgtccttgacccttcttcttcttctcgctaaaacttcctccattttcacccctccaaaatcatcatcatctccgacgattctgacattt 46996413  T
Q  841 tggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    | ||||||  |||||||| | ||||| ||||||||||||    
T  46996412 ttgaagtttgtgtgttcggctgtgattaaaggtaacacc 46996374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 421 - 523
Target Start/End: Original strand, 45463670 - 45463772
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||| |||||| ||||   |||||| ||||  |  |||||||||||||  ||||||    
T  45463670 gagtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtc 45463769  T
Q  521 cat 523  Q
    |||    
T  45463770 cat 45463772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 422 - 512
Target Start/End: Original strand, 3690151 - 3690241
Alignment:
Q  422 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||| |||||| ||||||| |||||||| ||   |||||||| || || ||||||||||||||||| ||||||| |||| |||||||||    
T  3690151 agtgaatcatcaacttcgtccttgaatttttacagttcggccaacttcgttcctcaattatgcgaaatatcaatttaatccttgaatttgt 3690241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 739 - 824
Target Start/End: Original strand, 27955687 - 27955771
Alignment:
Q  739 tcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctcc 824  Q
    |||||||||| |||||| |||||| | ||||| ||||||||| |||| ||| ||||| || || ||||||||||||||||||||||    
T  27955687 tcagaaacattaaaaacgtccttgacccttctgcttcccgcttaaaccttc-ccattctcacctctccaaaatcatcatcatctcc 27955771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 431 - 540
Target Start/End: Complemental strand, 39859343 - 39859234
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    |||||||||||||||||| |||| |||||||| || ||||  ||| |||||||  ||||||||| | |||| |    
T  39859343 tcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtccgtcaaaatg 39859244  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  39859243 gtccctccgt 39859234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 30109789 - 30109737
Alignment:
Q  422 agtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccc 474  Q
    ||||||||||||| |||||||||||||||||| | |||||||||||| |||||    
T  30109789 agtgaaccatcaatttcgtccctgaattttcaggggtcggccaaattcgtccc 30109737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 429 - 512
Target Start/End: Original strand, 33037701 - 33037785
Alignment:
Q  429 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaa-tttcatccctgaatttgt 512  Q
    |||||| ||||||| |||||||| | | ||||||||||||  ||||||||||||| ||||| |||| ||| ||||||||||||||    
T  33037701 catcaagttcgtccttgaatttttatgtgtcggccaaattcatccctcaattatgtgaaatatcaattttaatccctgaatttgt 33037785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 429 - 512
Target Start/End: Original strand, 47339784 - 47339867
Alignment:
Q  429 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||| |||||||||||||||  ||| ||||||||| || ||| |||||| ||||||||| ||||||| |||  |||||||||    
T  47339784 catcaacttcgtccctgaatttctacgggtcggccaacttcgtctctcaatgatgcgaaatatcaatttaatctttgaatttgt 47339867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 510
Target Start/End: Complemental strand, 13169762 - 13169683
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaattt 510  Q
    |||||||||||| ||||||||||    ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||    
T  13169762 tcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 13169683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 471 - 540
Target Start/End: Original strand, 6602385 - 6602454
Alignment:
Q  471 tccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 540  Q
    ||||| |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |||||||||||    
T  6602385 tccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 6602454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 728 - 821
Target Start/End: Original strand, 23168392 - 23168485
Alignment:
Q  728 tcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatc 821  Q
    |||||||| ||||||| |||||||| ||||| ||| |  |||||||||||| |||||| ||  ||||  |  || |||||||||||||||||||    
T  23168392 tcacatttcactcagacacatcaaacacatcattgacctttctccttcccgttaaaacctttaccatcttaacctctccaaaatcatcatcatc 23168485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 745 - 822
Target Start/End: Original strand, 48704494 - 48704571
Alignment:
Q  745 acatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatct 822  Q
    |||||||| || || |||||  |||| |||||||||||||| ||| ||||  || || ||||||||||||||||||||    
T  48704494 acatcaaacacgtctttggcctttctacttcccgctaaaaccttcaccatcttcgcctctccaaaatcatcatcatct 48704571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 151; Significance: 2e-79; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 421 - 631
Target Start/End: Complemental strand, 6758 - 6548
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||| |||||||||||||| ||||| ||||||| |||||||||||| |||||| ||    
T  6758 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctc 6659  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||| ||||||| |||||||    
T  6658 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcaccttgcatgctgtgctgtcttgtacgcgtggcaagaaggaagccacgt 6559  T
Q  621 gttcagggacg 631  Q
    |||||||||||    
T  6558 gttcagggacg 6548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 3e-72; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 421 - 631
Target Start/End: Complemental strand, 31201267 - 31201057
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||| |||| ||||||||||||||| ||||||| |||||||||||| |||||||||    
T  31201267 gagtgaaccatcaatttagtccctgaattttcacgggtcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtc 31201168  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| |||| ||||||| ||||||| | || ||    
T  31201167 catcaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgccttgcatgatgtgttgtcttgtatgcgtggcaagaaggaagtcatgt 31201068  T
Q  621 gttcagggacg 631  Q
    |||||||||||    
T  31201067 gttcagggacg 31201057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 42897898 - 42897689
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||| |||||||||||||| ||||| |||| ||  ||| |||||||||||||||||    
T  42897898 gagtgaaccatcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtc 42897799  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||||  | | |||| ||||||||||||||  ||||| | | ||||||||| |||| ||||| |||||| ||||||| |||||||    
T  42897798 catcaaaaaggtccctccgtccaagtgctctgttagccatgctgatctgtcgtcctgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgt 42897699  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  42897698 gttcaaggac 42897689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 421 - 630
Target Start/End: Original strand, 1320617 - 1320826
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||||||||||| |||| | |||||||||| |||||| |||||  |||||||||||||| |||| |||| ||  |||||||||||||||||||||    
T  1320617 gagtgaaccatcaaatttgtccttaaattttcacgggtcggctaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcagacgtc 1320716  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    |||||| ||||||| |||||  | | | ||||| ||||||| |||||||||||| | |||||| || |||| ||||| |||||| ||||||| |||||||    
T  1320717 cataaataaggtccttccgtccaagtgttccgtcagccatggtgacatgtcgccctgcatgctatgttgtcttgtacacgtggcaagaaggaagccacgt 1320816  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  1320817 gttcaaggac 1320826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 701 - 876
Target Start/End: Original strand, 8654780 - 8654951
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    ||||||||||||||||||   ||| |||||||||| | |||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||| || |    
T  8654780 gcccctgcattacatatt---tctccttcacatttcagtcagaaacatcaaaaacatcattgactcttctccttcccgctaaaactttctccattctcac 8654876  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaac 876  Q
    ||||||||||||||||||||||||  | |||||  | | || |||||||||||||||||| |||||||||||||||    
T  8654877 ccctccaaaatcatcatcatctcc-gcaattctgacatttttgaagttcctgtgttcgactgtgatcaaaggtaac 8654951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 38882921 - 38882712
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||| ||||||||||||  |||| ||||||  ||| |||| ||||||| || ||||||| ||||||||||||||||||||||    
T  38882921 gagtgaaccatcaaattcgtccttgaattttcacggatcggtcaaattcatccttcaactatgcgagatatcaatttaatccctgaatttgtcagacgtc 38882822  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||||||||| ||||||||||  | | ||||||||||||||| |||  ||||| | | ||||||||| |||| ||||| |||||| | ||||| | |||||    
T  38882821 cataaaaaatgtccctccgtccaagtgctccgttagccatgttgatctgtcgtcctgcatgctgtgttgtcttgtactcgtggcaacaaggaagtcacgt 38882722  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  38882721 gttcaaggac 38882712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 411 - 630
Target Start/End: Original strand, 8654491 - 8654708
Alignment:
Q  411 ttttaaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaattt 510  Q
    |||||||||| ||||||||||||| || ||| ||||||||| ||| ||||| |||||| || ||||||||||||||||| ||| ||| || | |||||||    
T  8654491 ttttaaaaag-agtgaaccatcaatttagtctctgaatttttacgagtcggtcaaattcgttcctcaattatgcgaaatatca-tttaattcttgaattt 8654588  T
Q  511 gtcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaag 610  Q
     |||||||||||| |||| |||||||||||  | | |||||||||||||||||||||||||||| | |||||  || |||| ||||| |||||| |||||    
T  8654589 atcagacgtccatcaaaagggtccctccgtccaagtgctccgttagccatgctgacatgtcgccctgcatgcaatgttgtcttgtacacgtggcaagaag 8654688  T
Q  611 gaggccacgtgttcagggac 630  Q
    || ||||| |||||| ||||    
T  8654689 gaagccacatgttcaaggac 8654708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 421 - 540
Target Start/End: Original strand, 31821418 - 31821537
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||| ||||||||||||||||||||||||| |||||| ||| || |||||||||||||||||||| |||| ||  |||| |||||| |||||||||    
T  31821418 gagtgaacaatcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtc 31821517  T
Q  521 cataaaaaaggtccctccgt 540  Q
    ||| ||||||||||||||||    
T  31821518 catcaaaaaggtccctccgt 31821537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 415 - 630
Target Start/End: Original strand, 32822355 - 32822569
Alignment:
Q  415 aaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtca 514  Q
    ||||| |||||||||||||| ||||||| |||||||| | |  |||||||||||  ||||||||||||   |||| |||| ||  |||||||||||||||    
T  32822355 aaaaatgagtgaaccatcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtca 32822454  T
Q  515 gacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggagg 614  Q
    || |||||| |||||||||| |||||  | | |||  ||||| ||||||||  ||||||| | |||||| || |||| |||||||||||| ||||||| |    
T  32822455 gatgtccatcaaaaaggtccttccgtccaagtgctttgttag-catgctgatctgtcgccatgcatgctttgttgtcttgtacgcgtggcaagaaggaag 32822553  T
Q  615 ccacgtgttcagggac 630  Q
    ||||||||||||||||    
T  32822554 ccacgtgttcagggac 32822569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 701 - 831
Target Start/End: Complemental strand, 31200987 - 31200866
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||| |||||||||||||||| |||||||||||||||||||         |||||||||||| || ||||| |||||||||||||||||||||||||| |    
T  31200987 gcccttgcattacatattcctccttcttcacattttactca---------aaaacatccttgacttttctctttcccgctaaaacgttctccattgtcac 31200897  T
Q  801 ccctccaaaatcatcatcatctccatcgatt 831  Q
    |||||||||||||||||||||||||| ||||    
T  31200896 ccctccaaaatcatcatcatctccattgatt 31200866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 33160272 - 33160063
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||| ||||||||||||||||| |||||||||||  ||||||||||||  ||||||||||||| ||||| |||| ||  || |||||||||||||||| |    
T  33160272 gagtaaaccatcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgtcagacgcc 33160173  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||    | | |||| ||||||||||||||  ||||||| | |||| |||| |||| | ||| |||||| ||||| ||  |||||    
T  33160172 catcaaaaaggtccctccacctaagtgctctgttagccatgctgatctgtcgccctgcatgttgtgttgtcttatacacgtggcaagaagaagctcacgt 33160073  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  33160072 gttcaaggac 33160063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 458 - 631
Target Start/End: Complemental strand, 33750471 - 33750298
Alignment:
Q  458 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagc 557  Q
    |||||||| || |||||||||||||||||||| |||| ||  |||||||||||||||||| | ||| ||||||||||||||||  | | |||| ||||||    
T  33750471 tcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtccaagtgctctgttagc 33750372  T
Q  558 catgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgtgttcagggacg 631  Q
     ||| |||  ||||| ||| |||| |||| |||| |||||||||||| ||||||| |||| |||||||||||||    
T  33750371 gatgttgatctgtcgtcttgcatgttgtgttgtcttgtacgcgtggcaagaaggaagccatgtgttcagggacg 33750298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 37526147 - 37525938
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||  | | ||||||||||||||| |||| ||  ||||||||||| |||||| ||    
T  37526147 gagtgaaccatcaaattcgtccttgaattttcacgcgtcggtcaaattcattcttcaattatgcgaaatatcaacttagtccctgaatttttcagacatc 37526048  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||||  | | || | ||||| |||| |||  ||||| | |  ||| |||| |||| | ||| |||||| ||||||| |||||||    
T  37526047 catcaaaaaggtccctccgtccaagtgcgctgttagtcatgttgatctgtcgtcctgtatgttgtgttgtcttatacacgtggcaagaaggaagccacgt 37525948  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  37525947 gttcaaggac 37525938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 701 - 879
Target Start/End: Complemental strand, 42897617 - 42897439
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||  || | | |||| ||||||||  ||||||||||| |||||| | |||| |||||||||||||||||||||| ||||||||| || |    
T  42897617 gcccctgcattaccgatacttccttcctcacatttctctcagaaacataaaaaacgttcttgactcttctccttcccgctaaaactttctccattctcac 42897518  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    | |||||||| ||||||||||| |  |||||||  ||| || ||||||  |||||||| | ||| | ||||||||||||    
T  42897517 cactccaaaaccatcatcatcttcgacgattctcacgtttttgaagttgttgtgttcggctgtggttaaaggtaacacc 42897439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 421 - 612
Target Start/End: Complemental strand, 462494 - 462303
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||  |||||||| ||   |||||||||||  ||| ||||||||||||||| |||| ||  ||| ||||||||||| |||||    
T  462494 gagtgaaccatcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtc 462395  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaagga 612  Q
    ||| |||||| ||||||| |  | | |||| ||||||||||||||  ||||||| | |||| |||| | || | ||| |||||| |||||||    
T  462394 catcaaaaagatccctccatccaagtgctctgttagccatgctgatttgtcgccgtgcatgttgtgttatcttatacacgtggcaagaagga 462303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 429 - 512
Target Start/End: Complemental strand, 31823559 - 31823476
Alignment:
Q  429 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||| |||||||||||||||||||| ||||||||| || |||||||||||||||||||| ||||||| |||||| |||||||    
T  31823559 catcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctaaatttgt 31823476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 32824362 - 32824271
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| || ||  ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  32824362 gagtgaatcatcaactttgtttctgaattttcacgggtcggccaaattagtccctcaattatgcgaaatatcaatttaatcactgaatttgt 32824271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 33748332 - 33748423
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||| || |||| ||||||||||||||| ||||||| || |||||||||||    
T  33748332 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgcgaaatatcaatttaattcctgaatttgt 33748423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 421 - 520
Target Start/End: Complemental strand, 25373713 - 25373614
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||| |||||| ||| ||| ||||||||||||| |||||||||||  | ||||||||||||||||| |||| || || |||||||||||||||||||    
T  25373713 gagtgaatcatcaagttcatccttgaattttcacgcatcggccaaattcattcctcaattatgcgaaatatcaacttaattcctgaatttgtcagacgtc 25373614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 31199485 - 31199576
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| || ||||||||||| ||||| |||||||||||| |||||| ||||||| ||||| ||||||| ||||||||||||||    
T  31199485 gagtgaatcatcaacttagtccctgaattatcacgggtcggccaaattcgtcccttaattatgagaaatatcaatttaatccctgaatttgt 31199576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 40019156 - 40019247
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| ||||||  |||||||| ||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  40019156 gagtgaatcatcaacttcgtctttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 40019247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 726 - 823
Target Start/End: Complemental strand, 37525846 - 37525749
Alignment:
Q  726 cttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctc 823  Q
    |||||||||| ||||| || ||| |||||   ||||| |||||||||||||||||||||| |||| |||| || ||||||||||||||||||||||||    
T  37525846 cttcacatttcactcataagcataaaaaatggccttgactcttctccttcccgctaaaactttcttcattctcacccctccaaaatcatcatcatctc 37525749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 436 - 512
Target Start/End: Original strand, 24526911 - 24526987
Alignment:
Q  436 ttcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||||||||||| |||| ||||||||| || |||||||||||||| ||||| ||||||| ||||||||||||||    
T  24526911 ttcgtccctgaatttacacgggtcggccaacttcgtccctcaattatgtgaaatatcaatttaatccctgaatttgt 24526987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 429 - 512
Target Start/End: Original strand, 461184 - 461267
Alignment:
Q  429 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||| ||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||  |||||| ||||||||||||||    
T  461184 catcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgtgaaataacaatttaatccctgaatttgt 461267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 421 - 520
Target Start/End: Complemental strand, 25707392 - 25707293
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||| |||||| ||| ||| | |||||| |||| |||||||||||  ||||||||||||||||||| |||| || |||||||||||||| |||||||    
T  25707392 gagtgaatcatcaagttcatccttaaatttttacgcatcggccaaattcatccctcaattatgcgaaatatcaacttaatccctgaatttgtgagacgtc 25707293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 415 - 495
Target Start/End: Original strand, 38881422 - 38881502
Alignment:
Q  415 aaaaaggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaat 495  Q
    |||||| |||||| |||||||||||||| ||||||||||||  || ||||||||  ||||||||||||||||||| |||||    
T  38881422 aaaaagaagtgaatcatcaaattcgtccttgaattttcacgaatcagccaaattcatccctcaattatgcgaaatgtcaat 38881502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 444 - 512
Target Start/End: Original strand, 42894799 - 42894867
Alignment:
Q  444 tgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||||||||| |||| ||||||| |||||| ||||||||||||| ||||||| ||||||||||||||    
T  42894799 tgaattttcacgggtcgaccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 42894867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 421 - 540
Target Start/End: Original strand, 9184383 - 9184502
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||| |||||| ||||||| ||||||| ||||  ||||||||||| ||| | ||| || ||||||| |||| ||  |||||||||||||||||||||    
T  9184383 gagtgaatcatcaatttcgtccttgaatttgcacgaatcggccaaattcgtcgcccaactacgcgaaatatcaaattagtccctgaatttgtcagacgtc 9184482  T
Q  521 cataaaaaaggtccctccgt 540  Q
     ||  ||| |||||||||||    
T  9184483 gatcgaaatggtccctccgt 9184502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 737 - 823
Target Start/End: Complemental strand, 38882603 - 38882517
Alignment:
Q  737 actcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctc 823  Q
    |||||||||||| |||||| || ||| | |||||||||||| ||||| | ||||||||| || || |||||||||||||||||||||    
T  38882603 actcagaaacataaaaaacgtcattgacccttctccttcccactaaagccttctccattttcaccgctccaaaatcatcatcatctc 38882517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 701 - 858
Target Start/End: Original strand, 32822641 - 32822798
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||| ||||||  || ||| ||||||||||||| | ||||||| || |||||| || ||| | |||||||||||| ||||||| || | |||| || |    
T  32822641 gcccctacattacccatacctccttcttcacatttcagtcagaaaaataaaaaacgtcattgacccttctccttcccactaaaactttattcattctcgc 32822740  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcg 858  Q
    | || |||||||||||||||||||  |||||||  ||| || |||||| |||| ||||    
T  32822741 ctcttcaaaatcatcatcatctccgacgattctgacgtttttgaagtttctgtattcg 32822798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 458 - 622
Target Start/End: Complemental strand, 8609894 - 8609731
Alignment:
Q  458 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagc 557  Q
    ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |||||||||||  |   ||||||||||     
T  8609894 tcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 8609795  T
Q  558 catgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgtgt 622  Q
      || |||| |||| |||| ||||||||| |||| ||||| |||| ||| ||||  |||||||||    
T  8609794 ggtgatgacgtgtc-ccttgcatgctgtgttgtcttgtacacgtgtcgacaaggcagccacgtgt 8609731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 431 - 540
Target Start/End: Original strand, 13282488 - 13282597
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||  || |||||||| |||| |    
T  13282488 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatg 13282587  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  13282588 gtccctccgt 13282597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 427 - 523
Target Start/End: Complemental strand, 28433834 - 28433738
Alignment:
Q  427 accatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccat 523  Q
    |||||||| |||||||||||||||||| |  ||||||||||| |||||||||||   |||||| ||||  |  |||||||||||||  |||||||||    
T  28433834 accatcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccat 28433738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 744 - 824
Target Start/End: Complemental strand, 33750191 - 33750111
Alignment:
Q  744 aacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctcc 824  Q
    |||||||||||| |||||| | ||| | |||| ||||||||| | || |||| || |||||||||||||||||||||||||    
T  33750191 aacatcaaaaacgtccttgaccctttttcttctcgctaaaacttccttcattttcacccctccaaaatcatcatcatctcc 33750111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 701 - 804
Target Start/End: Complemental strand, 462214 - 462111
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||| ||||  || ||| ||||||| || || |||||||||||| || ||| || ||| | |||||||||||||||||||| ||||||||| || |    
T  462214 gcccctgcgttacccatacctccttcttcgcagttcactcagaaacataaagaacgtcattgacccttctccttcccgctaaaactttctccattctcac 462115  T
Q  801 ccct 804  Q
    ||||    
T  462114 ccct 462111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 33368759 - 33368850
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||||||||||  |||||||| |||  |||| | ||||  || |||||||||||||||| ||||||| |||| |||||||||    
T  33368759 gagtgaatcatcaaattcgtctttgaatttttacgaatcggtcgaattcatctctcaattatgcgaaatatcaatttaatccttgaatttgt 33368850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 44620760 - 44620669
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| ||||||||||||||| || || |||| |||| | |||||  |||| ||| |||| |||||||| |||||||||||||    
T  44620760 gagtgaatcatcaacttcgtccctgaatttgcaagcatcggtcaaaatcgtccccaaattttgcaaaatatcaatttcgtccctgaatttgt 44620669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 540
Target Start/End: Complemental strand, 13108470 - 13108361
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    ||||| ||||  |||||| |||| |||||||| |||| ||  |||||||||||  ||||||||||| |||| |    
T  13108470 tcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatg 13108371  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  13108370 gtccctccgt 13108361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 744 - 833
Target Start/End: Original strand, 31821725 - 31821814
Alignment:
Q  744 aacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctccatcgattct 833  Q
    ||||| |||||  |||||| | ||||| |||  ||||||||| | ||||||| || |||||||||||||||||||||||||  |||||||    
T  31821725 aacataaaaaatgtccttgacccttcttcttatcgctaaaacttcctccattttcacccctccaaaatcatcatcatctccggcgattct 31821814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 728 - 824
Target Start/End: Original strand, 9184695 - 9184791
Alignment:
Q  728 tcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctcc 824  Q
    |||||||| ||||||| |||||||| || ||| ||    ||||||||||||||||||| |||  |||  || || ||||||||||||||||||||||    
T  9184695 tcacatttcactcagacacatcaaatacgtccatgatctttctccttcccgctaaaaccttcatcatcttcacctctccaaaatcatcatcatctcc 9184791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 464 - 540
Target Start/End: Complemental strand, 9673266 - 9673190
Alignment:
Q  464 aaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 540  Q
    ||||| |||||| |||| || ||||| || |||| ||||||||||||  ||||||||||| |||| |||||||||||    
T  9673266 aaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgt 9673190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 461 - 540
Target Start/End: Complemental strand, 26242418 - 26242339
Alignment:
Q  461 gccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 540  Q
    |||||||| |||||| |||| |||||||| || ||||  || ||||||||  ||||||||||| |||| |||||||||||    
T  26242418 gccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtccctccgt 26242339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 470 - 512
Target Start/End: Complemental strand, 1322356 - 1322314
Alignment:
Q  470 gtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||||||||||| |||| ||||||| ||||||||||||||    
T  1322356 gtccctcaattatgcaaaatatcaatttaatccctgaatttgt 1322314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 767 - 824
Target Start/End: Complemental strand, 11721544 - 11721487
Alignment:
Q  767 ttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctcc 824  Q
    ||||||||||||||||||| ||| || |  || || ||||||||||||||||||||||    
T  11721544 ttctccttcccgctaaaaccttcaccttcttcacctctccaaaatcatcatcatctcc 11721487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 431 - 540
Target Start/End: Original strand, 27691164 - 27691273
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    |||||||| || |||||| |||| |||||||| |||| ||  |||||||||||  ||||||||||| |||       
T  27691164 tcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcc 27691263  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  27691264 gtccctccgt 27691273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 2e-55; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 421 - 630
Target Start/End: Original strand, 35395333 - 35395540
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| || |||||||||||||||||||| |||||||  | ||||||||||| |||||||    
T  35395333 gagtgaaccatcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtc 35395432  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||||  | | |||| |||||||||||||| |||||||||| ||||  ||| |||| |||||||||||| ||||||| ||||| |    
T  35395433 catcaaaaaggtccctccgtccaagtgctctgttagccatgctgatatgtcgccttgcatg--gtgttgtcttgtacgcgtggcaagaaggaagccacat 35395530  T
Q  621 gttcagggac 630  Q
    ||||||||||    
T  35395531 gttcagggac 35395540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 18728726 - 18728517
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| || |||||| ||||||||||||| |||| ||  |||||||||||||||||||||    
T  18728726 gagtgaaccatcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 18728627  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||||  | | |||| ||||||| ||||||  |||| |||| ||||||||| |||| ||||| |||||| ||||||| |||||||    
T  18728626 catcaaaaaggtccctccgtccaagtgctctgttagccttgctgatctgtcaccttgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgt 18728527  T
Q  621 gttcagggac 630  Q
    ||| ||||||    
T  18728526 gttaagggac 18728517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 421 - 630
Target Start/End: Original strand, 32087514 - 32087723
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    ||||||||||||||||||||||||||||||||||||||||  ||| || |||||| ||||||||||||| |||| ||  ||||| ||||| |||||||||    
T  32087514 gagtgaaccatcaaattcgtccctgaattttcacgcgtcgatcaacttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtc 32087613  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| ||||||||||||||||  | | |||| ||||||| ||||||  | ||||||| ||||||||| |||| |||||||||||| ||||||| |||||||    
T  32087614 catcaaaaaggtccctccgtccaagtgctctgttagccttgctgatctatcgccttgcatgctgtgttgtcttgtacgcgtggcaagaaggaagccacgt 32087713  T
Q  621 gttcagggac 630  Q
    ||||||||||    
T  32087714 gttcagggac 32087723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 420 - 630
Target Start/End: Original strand, 33256399 - 33256609
Alignment:
Q  420 ggagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgt 519  Q
    |||||||||||||||||||||||||||||||| || |||||||||| ||  ||| ||||||||||||||| |||| || |||  ||||||||||||||||    
T  33256399 ggagtgaaccatcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaacttaatctttgaatttgtcagacgt 33256498  T
Q  520 ccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacg 619  Q
    |||| ||||| ||||||||||  | |  ||||||||||| ||||||  |||| |||| ||||||||| |||| |||||| ||||| ||||||| ||||||    
T  33256499 ccatcaaaaaagtccctccgtccaagtcctccgttagccttgctgatctgtcaccttgcatgctgtgttgtcttgtacgagtggcaagaaggaagccacg 33256598  T
Q  620 tgttcagggac 630  Q
    |||||||||||    
T  33256599 tgttcagggac 33256609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 43318184 - 43317975
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||| |||||||| | | |||||||||| |  ||||||||||||||||||| |||| ||  |||||||||||||||||||||    
T  43318184 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 43318085  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||||||||||||||||||||  | | |||| ||||||||||| || ||||||||   |||| ||||||||| |||||  ||||| | ||||| |||||||    
T  43318084 cataaaaaaggtccctccgtccaagtgctctgttagccatgccgatatgtcgcccagcatgttgtgctgtcttgtacatgtggcaaaaaggaagccacgt 43317985  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  43317984 gttcaaggac 43317975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 38178217 - 38178008
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||| ||||||||||||| | |||||||||| ||||| ||||||  ||||||||||||||||||| |||||||  |  ||||||||||||||||||    
T  38178217 gagtgaactatcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtc 38178118  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||||| |||  | | ||||||||||||||||||| |||||| | | ||||||||| |||| ||||| ||| || | ||||| | |||||    
T  38178117 catcaaaaaggtcccttcgtccatgtgctccgttagccatgctgatatgtcgtcctgcatgctgtgttgtcttgtacacgtagcaaaaaggaagtcacgt 38178018  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  38178017 gttcaaggac 38178008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 38205441 - 38205232
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||| ||||||||||||| | |||||||||| ||||| ||||||  ||||||||||||||||||| |||||||  |  ||||||||||||||||||    
T  38205441 gagtgaactatcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtc 38205342  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    ||| |||||||||||| |||  | | ||||||||||||||||||| |||||| | | ||||||||| |||| ||||| ||| || | ||||| | |||||    
T  38205341 catcaaaaaggtcccttcgtccatgtgctccgttagccatgctgatatgtcgtcctgcatgctgtgttgtcttgtacacgtagcaaaaaggaagtcacgt 38205242  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  38205241 gttcaaggac 38205232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 421 - 630
Target Start/End: Complemental strand, 35292505 - 35292297
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||| |||||||| | | || ||||||| |  ||| ||||||||||||||| |||| ||  |||||||||||||||||||||    
T  35292505 gagtgaaccatcaaattcgtccttgaatttttatgggt-ggccaaaatcatccttcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtc 35292407  T
Q  521 cataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgcgtggcgagaaggaggccacgt 620  Q
    |||||||||||| |||||||  |   ||||||||||| || ||||  |||||||   |||| ||||||||| ||||| |||||| | ||||| || ||||    
T  35292406 cataaaaaaggttcctccgtccaaatgctccgttagctattctgatctgtcgcccaacatgttgtgctgtcttgtacacgtggcaaaaaggaagctacgt 35292307  T
Q  621 gttcagggac 630  Q
    ||||| ||||    
T  35292306 gttcaaggac 35292297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 421 - 533
Target Start/End: Original strand, 38596868 - 38596980
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||||||||||||||||| |||||||| | | |||||||||||| |||||||||||||||||||| |||| ||  ||||||||||||| |||||||    
T  38596868 gagtgaaccatcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtc 38596967  T
Q  521 cataaaaaaggtc 533  Q
    ||| |||||||||    
T  38596968 catcaaaaaggtc 38596980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 40330606 - 40330515
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||||||| |||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||    
T  40330606 gagtgaatcatcaacttcgtccctgaattttcacgggtcggccaaaatcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 40330515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 701 - 875
Target Start/End: Complemental strand, 35292231 - 35292057
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    ||||||| |||||  || ||| |||| |||||||  ||||||||||||||||||||||||||   |||||||||||| ||||||| ||||||||| || |    
T  35292231 gcccctgtattacccatacctccttcctcacattccactcagaaacatcaaaaacatccttgatccttctccttccccctaaaactttctccattctcac 35292132  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaa 875  Q
    | ||||||||||||||||||||||  |||||||  ||| ||  ||||| ||||||||| | ||| | ||||||||    
T  35292131 ctctccaaaatcatcatcatctccggcgattctcacgtttttaaagtttctgtgttcggctgtggttaaaggtaa 35292057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 32090016 - 32089925
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||    
T  32090016 gagtgaatcatcaacttcgtccctgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaatttgt 32089925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 421 - 510
Target Start/End: Original strand, 32835876 - 32835965
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaattt 510  Q
    ||||||| |||||| |||||||||||||||||||| ||||| |||||| |||||| ||||||||||||| ||||||| ||||||||||||    
T  32835876 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 32835965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 42619289 - 42619380
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||||||| ||||| ||| || |||||||||||||||||||| ||||||| ||||| ||||||||    
T  42619289 gagtgaatcatcaacttcgtccctgaattttcacgggtcggtcaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgt 42619380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 701 - 822
Target Start/End: Complemental strand, 38177936 - 38177815
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||  || | | |||| ||||||||  ||||||||||| |||||| |||||| ||||||||||||| |||||||| ||||||||| || |    
T  38177936 gcccctgcattacccatacttccttcctcacatttctctcagaaacataaaaaacgtccttgactcttctccttcctgctaaaactttctccattctcac 38177837  T
Q  801 ccctccaaaatcatcatcatct 822  Q
    | |||||||| |||||||||||    
T  38177836 ctctccaaaaccatcatcatct 38177815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 701 - 822
Target Start/End: Complemental strand, 38205160 - 38205039
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||  || | | |||| ||||||||  ||||||||||| |||||| |||||| ||||||||||||| |||||||| ||||||||| || |    
T  38205160 gcccctgcattacccatacttccttcctcacatttctctcagaaacataaaaaacgtccttgactcttctccttcctgctaaaactttctccattctcac 38205061  T
Q  801 ccctccaaaatcatcatcatct 822  Q
    | |||||||| |||||||||||    
T  38205060 ctctccaaaaccatcatcatct 38205039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 429 - 512
Target Start/End: Complemental strand, 33257843 - 33257760
Alignment:
Q  429 catcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||| |||||||||||||||| ||| ||||||||| || |||||| ||||||||||||| ||||||| ||||||||||||||    
T  33257843 catcaacttcgtccctgaatttttacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 33257760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 701 - 876
Target Start/End: Original strand, 35395609 - 35395779
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||  || ||| ||||||||||||    |||| ||||||||| || |||||| | ||||| |||||||||||||| | ||||||| || |    
T  35395609 gcccctgcattacccatacctccttcttcacatt----tcag-aacatcaaacacgtccttgacccttcttcttcccgctaaaacttcctccattttcac 35395703  T
Q  801 ccctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaac 876  Q
    ||||||||||||||||||||||||  |||||||  | | || ||||||  |||||||| | ||||| |||||||||    
T  35395704 ccctccaaaatcatcatcatctccgacgattctgacatttttgaagtttgtgtgttcggctgtgattaaaggtaac 35395779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 500 - 630
Target Start/End: Original strand, 38597024 - 38597154
Alignment:
Q  500 tccctgaatttgtcagacgtccataaaaaaggtccctccgttaacgggctccgttagccatgctgacatgtcgcctttcatgctgtgctgtcctgtacgc 599  Q
    ||||| |||||||||||||||||| ||||||||||||| ||  | | | |||||||||| ||||||  ||||||| | ||||||||| |||| ||||| |    
T  38597024 tcccttaatttgtcagacgtccatcaaaaaggtccctctgtccaagtgttccgttagccgtgctgatctgtcgccctgcatgctgtgttgtcttgtacac 38597123  T
Q  600 gtggcgagaaggaggccacgtgttcagggac 630  Q
    ||||| ||||||| ||| |||||||| ||||    
T  38597124 gtggcaagaaggaagccgcgtgttcaaggac 38597154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 701 - 817
Target Start/End: Complemental strand, 32838352 - 32838236
Alignment:
Q  701 gcccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtccc 800  Q
    |||||||||||||  || | | |||| ||||||||  ||||||||||| |||||| || ||| |||||||||||||||||||||| ||||||||| || |    
T  32838352 gcccctgcattacccatacttccttcctcacatttctctcagaaacataaaaaacgtcattgactcttctccttcccgctaaaactttctccattctcac 32838253  T
Q  801 ccctccaaaatcatcat 817  Q
    | |||||||| ||||||    
T  32838252 ctctccaaaaccatcat 32838236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 436 - 512
Target Start/End: Original strand, 38176647 - 38176723
Alignment:
Q  436 ttcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||||||||||||||| | || ||||||||| |||||| ||||||||||||| ||||||| ||||||||||||||    
T  38176647 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 38176723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 436 - 512
Target Start/End: Original strand, 38203871 - 38203947
Alignment:
Q  436 ttcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    |||||||||||||||||| | || ||||||||| |||||| ||||||||||||| ||||||| ||||||||||||||    
T  38203871 ttcgtccctgaattttcatgggttggccaaattcgtcccttaattatgcgaaatatcaatttaatccctgaatttgt 38203947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 744 - 879
Target Start/End: Original strand, 32087831 - 32087966
Alignment:
Q  744 aacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctccatcgattcttgcgtgttgg 843  Q
    |||||||||||| |||||| | ||||| |||| ||||||||| | |||||||  | |||||||||||||||||||||||||| ||||| |  | | || |    
T  32087831 aacatcaaaaacgtccttgacccttcttcttctcgctaaaacttcctccatttccacccctccaaaatcatcatcatctccagcgattataccatttttg 32087930  T
Q  844 aagttcctgtgttcgaccgtgatcaaaggtaacacc 879  Q
    |||||  |||||||| | ||||| ||||||||||||    
T  32087931 aagtttgtgtgttcggctgtgattaaaggtaacacc 32087966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 35291048 - 35291139
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| ||||||  |||||||||||||||||||  |||||||||||  |||||||| |||| ||||| ||||||| ||||||||||||||    
T  35291048 gagtgaatcatcaatgtcgtccctgaattttcacggttcggccaaattcatccctcaactatgtgaaatatcaatttaatccctgaatttgt 35291139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 702 - 875
Target Start/End: Complemental strand, 18728446 - 18728278
Alignment:
Q  702 cccctgcattacatattccttcttcttcacattttactcagaaacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccc 801  Q
    ||||||||||||  || ||| ||||||||||||    |||| |||||||||||| || ||| | ||||| |||| ||||||||| | ||||||| || ||    
T  18728446 cccctgcattacccatacctccttcttcacatt----tcag-aacatcaaaaacgtctttgacccttcttcttctcgctaaaacttcctccattttcacc 18728352  T
Q  802 cctccaaaatcatcatcatctccatcgattcttgcgtgttggaagttcctgtgttcgaccgtgatcaaaggtaa 875  Q
    |||||||||||||||||||||||  |||||||  | | || ||||||  |||||||| | ||||| ||||||||    
T  18728351 cctccaaaatcatcatcatctccggcgattctaccatttttgaagtttgtgtgttcggctgtgattaaaggtaa 18728278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 431 - 540
Target Start/End: Original strand, 17574328 - 17574437
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    ||||||||||| |||||| |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |    
T  17574328 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 17574427  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  17574428 gtccctccgt 17574437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 431 - 540
Target Start/End: Complemental strand, 36057727 - 36057618
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| ||||||||||    ||||||||||| |||||| |||| |||||||| || ||||   ||||||||||  ||||||||||| |||| |    
T  36057727 tcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgtccatcaaaatg 36057628  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  36057627 gtccctccgt 36057618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 748 - 833
Target Start/End: Complemental strand, 43317870 - 43317785
Alignment:
Q  748 tcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctccatcgattct 833  Q
    ||||||||||||||| | |||||||| ||| ||||||| ||||||||| || || | ||||||||||||||||||||  |||||||    
T  43317870 tcaaaaacatccttgacccttctcctcccccctaaaactttctccattctcacctccccaaaatcatcatcatctccggcgattct 43317785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 18726565 - 18726656
Alignment:
Q  421 gagtgaaccatcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgt 512  Q
    ||||||| |||||| |||||||||||||||| ||| ||   |||| || |||||||||||||||||||| |||||||  ||||| |||||||    
T  18726565 gagtgaatcatcaacttcgtccctgaatttttacgggttccccaacttcgtccctcaattatgcgaaatatcaatttagtcccttaatttgt 18726656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 458 - 540
Target Start/End: Original strand, 24496780 - 24496862
Alignment:
Q  458 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 540  Q
    |||| |||||| |||||||||||||| ||||| |||| || |||||||||||||| |||||| ||| |||| ||||| |||||    
T  24496780 tcggtcaaatttgtccctcaattatgtgaaatatcaaattaatccctgaatttgtgagacgttcatcaaaatggtccatccgt 24496862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 744 - 824
Target Start/End: Original strand, 33256716 - 33256796
Alignment:
Q  744 aacatcaaaaacatccttggctcttctccttcccgctaaaacgttctccattgtcccccctccaaaatcatcatcatctcc 824  Q
    ||||||||||||  ||||| | ||||| |||| | ||||||| | ||||||| || |||||||||||||||||||||||||    
T  33256716 aacatcaaaaacgaccttgacacttcttcttctcactaaaacttcctccattttcacccctccaaaatcatcatcatctcc 33256796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 458 - 540
Target Start/End: Original strand, 2179824 - 2179906
Alignment:
Q  458 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 540  Q
    |||| |||||| |||||| |||| || ||||| || |||| ||||||||||||  ||||| ||||| |||| |||||||||||    
T  2179824 tcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatccatcaaaatggtccctccgt 2179906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 431 - 540
Target Start/End: Original strand, 7267853 - 7267962
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    ||| ||||||| ||| || |||| |||||||| || ||||  |||||||||||  ||||||||||| |||| |    
T  7267853 tcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatg 7267952  T
Q  531 gtccctccgt 540  Q
     |||||||||    
T  7267953 atccctccgt 7267962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 463 - 540
Target Start/End: Complemental strand, 30468362 - 30468285
Alignment:
Q  463 caaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaaggtccctccgt 540  Q
    |||||| ||| ||||||| |||||||| || ||||  ||| |||||||  ||||||||||| |||| |||||||||||    
T  30468362 caaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccgt 30468285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 444 - 520
Target Start/End: Original strand, 2121 - 2197
Alignment:
Q  444 tgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtc 520  Q
    |||||||| |||| ||| |||||||  ||||||||||||||||||| |||| || |||||| |||||||||||||||    
T  2121 tgaatttttacgcatcgaccaaattcatccctcaattatgcgaaatatcaacttaatccctaaatttgtcagacgtc 2197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 30; Significance: 0.0000004; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 431 - 540
Target Start/End: Original strand, 3304 - 3413
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    |||||||| || |||||| |||| |||||||| |||| ||  |||||||||||  ||||||||||| |||       
T  3304 tcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattc 3403  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  3404 gtccctccgt 3413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 431 - 540
Target Start/End: Original strand, 4476 - 4585
Alignment:
Q  431 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccataaaaaag 530  Q
    |||||||||||| |||||||| |    |||||||| || |||||| |||| |||||||| |||| ||  |||||||||||  ||||||||||| |||       
T  4476 tcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattc 4575  T
Q  531 gtccctccgt 540  Q
    ||||||||||    
T  4576 gtccctccgt 4585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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