View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2765_low_7 (Length: 229)
Name: NF2765_low_7
Description: NF2765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2765_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 40439654 - 40439735
Alignment:
| Q |
16 |
atagggtgggtcttggggtggttggagtgttgggttcagaaagaggagcgtggccgccggggtgatccatgaatggccgtcg |
97 |
Q |
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| T |
40439654 |
atagggtgggtcttggggtggttggggtgttgggttcagaaagaggagcgtggccgccggggtgatccatgaatggccgtcg |
40439735 |
T |
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Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 40439794 - 40439847
Alignment:
| Q |
156 |
tgccccattcctcaacccttcaatccctcctctgtttttgttgatctgcaccat |
209 |
Q |
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| T |
40439794 |
tgccccattcctcaacccttcaatccctcctctgtttttgttgatctgcaccat |
40439847 |
T |
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