View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2766_high_50 (Length: 251)
Name: NF2766_high_50
Description: NF2766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2766_high_50 |
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Alignment Details
Target: chr5 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 7194055 - 7193815
Alignment:
| Q |
1 |
tctatttcaccttgaactagtcacgagtgtgaacacctgaaatcggaaagtaactcattatctttgcatattgtagtttaggaattttcaaatgcatatt |
100 |
Q |
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| T |
7194055 |
tctatttcaccttgaactagtcacgagtgtgaacacctgaaatcggaaagtaactcattatctttgcatattgtagtttaggaattttcaaatgcatatt |
7193956 |
T |
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| Q |
101 |
aagattgcagagatttaagtgaactacataactacttaatcagataagagcataaggtaattgcacatgcggttaagtatctacaagtatggatcatact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
7193955 |
aagattgcagagatttaagtgaactacataactacttaatcagataagagcataaggtaattgcacatgcggttaagtatctacaagtatcgatcatact |
7193856 |
T |
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| Q |
201 |
taccagcgagataagcgtttttgattatgcttaagtctctg |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
7193855 |
taccagcgagataagcgtttttgattatgcttaagtctctg |
7193815 |
T |
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