View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2766_high_52 (Length: 249)
Name: NF2766_high_52
Description: NF2766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2766_high_52 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 7553674 - 7553435
Alignment:
| Q |
1 |
cagccctcatatgataatactcaagaaattagcacctcatttttatagctgacaggcttttgaaataaaaggagtccacatgactacatgctttcaaaat |
100 |
Q |
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| T |
7553674 |
cagccctcatatgataatactcaagaaattagcacctcatttttatagctaacaggcttttgaaataaaaggagtccacatgactacatgctttcaaaat |
7553575 |
T |
|
| Q |
101 |
ctctaactacagttctgccagtttcttctgtgcatcttttgcaacattttaaaggccaaaaatattccaccatattggcatacatgctacattaacttgt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
7553574 |
ctctaactacagttctgccagtttcttctgtgcatcttttgcaacattttaaaggccaaaattattccaccatattggcatacatgctacattaacttgt |
7553475 |
T |
|
| Q |
201 |
ataaaaactactaatatactttaaaattcttttacctttg |
240 |
Q |
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|||||||||||||||||||||||||| ||||||||||||| |
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| T |
7553474 |
ataaaaactactaatatactttaaaactcttttacctttg |
7553435 |
T |
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