View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2766_high_58 (Length: 236)
Name: NF2766_high_58
Description: NF2766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2766_high_58 |
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Alignment Details
Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 9376360 - 9376562
Alignment:
| Q |
1 |
aaaatcaaatgtcaaatggagcaatacatgaaaatatacattccacaacagtcttttattttattatattaggaagtttataatacacaaggatgagatc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9376360 |
aaaatcaaatgtcaaatggagcaatacatgaaaatatacattccacaagagtcttttattttattatattaggaagtttataatacacaaggatgagatc |
9376459 |
T |
|
| Q |
101 |
tttaggtttataatttaataattgataaatagatatagttttctataatcacatatagtaactctaatatttgagtcacttatcaaatattaagagaatg |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
9376460 |
tttaggtttataatttaataattgataaatagatatagttttctataatcacatatagtaactctaatatttgagtcacttatcaaatattaagagaatg |
9376559 |
T |
|
| Q |
201 |
gag |
203 |
Q |
| |
|
||| |
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|
| T |
9376560 |
gag |
9376562 |
T |
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