View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2766_high_63 (Length: 224)
Name: NF2766_high_63
Description: NF2766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2766_high_63 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 35498388 - 35498611
Alignment:
| Q |
1 |
aaagggatagataataaacaatagtctggctgcaaaagaacagaaatgcaagcctgtgaatgcaacgcagaaatgtaagcacacttcaaacatcacttta |
100 |
Q |
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| T |
35498388 |
aaagggatagataataaacaatagtctggctgcaaaacaacagaaatgcaagcctgtgaatgcaacgcagaaatgtaagcacacttcaaacatcacttta |
35498487 |
T |
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| Q |
101 |
tgttttttccatgctcaaatattttccaatgttgttggatataaattaatatgatccttgtttacttaaattagaacgcaaatatactaaatgctactca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35498488 |
tgttttttccatgctcaaatattttccaatgttgttggatataaattaatatgatccttgtttacttaaattagaacgcaaatatactaaatgctactca |
35498587 |
T |
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| Q |
201 |
cgaacaaaatatgaggataaaaat |
224 |
Q |
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| T |
35498588 |
caaacaaaatatgaggataaaaat |
35498611 |
T |
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