View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2766_low_35 (Length: 353)

Name: NF2766_low_35
Description: NF2766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2766_low_35
NF2766_low_35
[»] chr8 (9 HSPs)
chr8 (125-293)||(22846275-22846428)
chr8 (4-79)||(12402616-12402691)
chr8 (4-77)||(24727684-24727757)
chr8 (1-81)||(21465463-21465543)
chr8 (3-79)||(29447040-29447116)
chr8 (3-81)||(15816057-15816135)
chr8 (3-81)||(22652029-22652107)
chr8 (1-79)||(24205749-24205827)
chr8 (4-41)||(34451000-34451037)
[»] chr5 (8 HSPs)
chr5 (4-80)||(32766872-32766948)
chr5 (9-81)||(21576684-21576756)
chr5 (3-81)||(21522803-21522881)
chr5 (3-81)||(21533369-21533447)
chr5 (2-79)||(18316856-18316933)
chr5 (3-79)||(6401551-6401627)
chr5 (16-80)||(27932290-27932354)
chr5 (5-81)||(41091185-41091261)
[»] chr6 (7 HSPs)
chr6 (9-80)||(33001229-33001300)
chr6 (3-81)||(16766750-16766828)
chr6 (3-80)||(3209441-3209518)
chr6 (10-81)||(17435259-17435330)
chr6 (9-80)||(28152146-28152217)
chr6 (9-80)||(34595182-34595253)
chr6 (16-80)||(17327590-17327654)
[»] chr2 (7 HSPs)
chr2 (3-81)||(35056921-35056999)
chr2 (3-41)||(36096343-36096381)
chr2 (31-80)||(10535685-10535734)
chr2 (3-80)||(11223793-11223869)
chr2 (3-80)||(37419796-37419873)
chr2 (17-81)||(30404789-30404853)
chr2 (5-81)||(30717458-30717534)
[»] scaffold0003 (1 HSPs)
scaffold0003 (3-80)||(241647-241724)
[»] chr4 (8 HSPs)
chr4 (3-80)||(22234819-22234896)
chr4 (17-80)||(35161092-35161155)
chr4 (3-79)||(30982808-30982884)
chr4 (9-80)||(23292926-23292997)
chr4 (9-80)||(34306744-34306815)
chr4 (3-57)||(15724506-15724560)
chr4 (15-80)||(5654503-5654568)
chr4 (3-80)||(24613630-24613707)
[»] chr1 (10 HSPs)
chr1 (3-80)||(5944336-5944413)
chr1 (9-78)||(29163323-29163392)
chr1 (3-80)||(47989550-47989627)
chr1 (4-80)||(6427518-6427594)
chr1 (9-81)||(32461392-32461464)
chr1 (3-57)||(6612123-6612177)
chr1 (22-80)||(17408763-17408821)
chr1 (7-80)||(25934673-25934746)
chr1 (3-80)||(31694639-31694716)
chr1 (3-80)||(40917802-40917879)
[»] chr7 (5 HSPs)
chr7 (9-80)||(21880200-21880271)
chr7 (9-81)||(598256-598328)
chr7 (31-80)||(4017729-4017777)
chr7 (3-80)||(24339695-24339772)
chr7 (16-80)||(5409771-5409835)
[»] chr3 (5 HSPs)
chr3 (3-81)||(15796222-15796300)
chr3 (3-80)||(41961579-41961656)
chr3 (3-80)||(34185052-34185129)
chr3 (4-80)||(14209167-14209243)
chr3 (9-81)||(55401123-55401195)
[»] scaffold0050 (1 HSPs)
scaffold0050 (9-77)||(70326-70394)
[»] scaffold0623 (1 HSPs)
scaffold0623 (3-41)||(5964-6002)
[»] scaffold0039 (1 HSPs)
scaffold0039 (3-57)||(84925-84979)


Alignment Details
Target: chr8 (Bit Score: 107; Significance: 1e-53; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 125 - 293
Target Start/End: Complemental strand, 22846428 - 22846275
Alignment:
Q  125 gtagaactagttttgtttctatagttcatagaattggatggtgtttctctagttagattgatttttcaatttgttattattgaaaattgtgttagttttc 224  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               ||||||||||    
T  22846428 gtagaactaattttgtttctatagttcatagaattggatggtgtttctctagttagattgatttttcaatttgtt---------------gttagttttc 22846344  T
Q  225 accattgtgtttaacttagttcgtaatactcttgtcctactcctaactcttgtgggatcctcaagagtg 293  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22846343 accattgtgttgaacttagttcgtaatactgttgtcctactcctaactcttgtgggatcctcaagagtg 22846275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 12402691 - 12402616
Alignment:
Q  4 gtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcata 79  Q
    |||||||||||||||||||||| |||| || | |||||| ||| |||  |||| |||| |||||||||||||||||    
T  12402691 gtgtcgtgtcgatgtcgaacacaacacatgcccgacaccggaacacgtataatttgaagagtgttcgtgcttcata 12402616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 24727757 - 24727684
Alignment:
Q  4 gtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttca 77  Q
    ||||| ||||| | ||||||| ||||||||||  | ||||||| |||||||||| || ||||||||||||||||    
T  24727757 gtgtcatgtcggtatcgaacatgacacgtgtccaataccagaacacgcctaatccgagaagtgttcgtgcttca 24727684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21465463 - 21465543
Alignment:
Q  1 ttggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatagc 81  Q
    |||||||||||||  ||||| ||||||||||||||  ||||  | ||||||||||| |||  ||||| |||||||||||||    
T  21465463 ttggtgtcgtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttcatagc 21465543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 29447116 - 29447040
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcata 79  Q
    |||||| ||||| ||||| |||||||| |||||||||||||| | ||||||||||  |  ||||| |||||||||||    
T  29447116 ggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 15816135 - 15816057
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatagc 81  Q
    |||||||||| | ||||| ||||||||||  || |||||| | | |||||||||| || |||||| |||||||||||||    
T  15816135 ggtgtcgtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagc 15816057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 22652029 - 22652107
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatagc 81  Q
    |||||||||||| ||||| |||||||| ||||| |||||| | | ||| |||||| ||  ||||| |||||||||||||    
T  22652029 ggtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatagc 22652107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 24205827 - 24205749
Alignment:
Q  1 ttggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcata 79  Q
    ||||||| |||||| |||||||||| || | ||||||||||| ||| |||||||||| ||  ||||| |||| ||||||    
T  24205827 ttggtgttgtgtcggtgtcgaacacaacgcatgtctgacaccggaacacgcctaatccgaggagtgtccgtgtttcata 24205749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 34451037 - 34451000
Alignment:
Q  4 gtgtcgtgtcgatgtcgaacacgacacgtgtctgacac 41  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  34451037 gtgtcgtgtcggtgtcggacacgacacgtgtctgacac 34451000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 32766948 - 32766872
Alignment:
Q  4 gtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    ||||||||||| ||||||| |||||||||||| |||||||| ||||| |||||||||  ||||| ||||||||||||    
T  32766948 gtgtcgtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcatag 32766872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 21576756 - 21576684
Alignment:
Q  9 gtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatagc 81  Q
    |||||||||||| ||||||||||||||||||||  | | |||||||||| ||  ||||| |||||||||||||    
T  21576756 gtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatagc 21576684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 21522803 - 21522881
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatagc 81  Q
    |||||||||||| ||||| |||||||||||||| | |||| | | ||||||||||  || ||||| ||||| |||||||    
T  21522803 ggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatagc 21522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 21533369 - 21533447
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatagc 81  Q
    |||||||||||| ||||| |||||||||||||| | |||| | | ||||||||||  || ||||| ||||| |||||||    
T  21533369 ggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatagc 21533447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 18316933 - 18316856
Alignment:
Q  2 tggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcata 79  Q
    ||||||||||| ||||||||| ||||||  | || |||||||||| ||| ||||||  || ||||| |||||||||||    
T  18316933 tggtgtcgtgttgatgtcgaaaacgacatatttccgacaccagaacacgtctaatccaaatagtgtccgtgcttcata 18316856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 6401551 - 6401627
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcata 79  Q
    |||||||||||  ||||| ||||||||||||||||||||  | |||||||| |||  |  ||||| |||||||||||    
T  6401551 ggtgtcgtgtcagtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 27932290 - 27932354
Alignment:
Q  16 tgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    ||||| |||||||||||||| |||||||| | |||||||||  ||  |||||| |||||||||||    
T  27932290 tgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcatag 27932354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 41091261 - 41091185
Alignment:
Q  5 tgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatagc 81  Q
    ||||||||| |||||| || ||||| |||||| ||||||    ||| |||||||||  |||||||||||||||||||    
T  41091261 tgtcgtgtcaatgtcggacgcgacatgtgtctaacaccaaggcacgtctaatctgaggagtgttcgtgcttcatagc 41091185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 33001300 - 33001229
Alignment:
Q  9 gtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||| ||||| |||||||||||||||||||||  |||||||||||||  || |||||| |||||||||||    
T  33001300 gtgtcggtgtcggacacgacacgtgtctgacaccgaaatacgcctaatccaaagagtgtttgtgcttcatag 33001229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 16766750 - 16766828
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatagc 81  Q
    |||||||||||| ||||| |||| ||||||||| |||||| | | |||||||||| ||| | ||| |||||||||||||    
T  16766750 ggtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatagc 16766828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 3209441 - 3209518
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||||||||  |||||||||||||||| ||| |||||| | | |||||||||| ||  |||||| |||||||||||    
T  3209441 ggtgtcgtgtcagtgtcgaacacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 17435259 - 17435330
Alignment:
Q  10 tgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatagc 81  Q
    ||||||||||| |||||||||||||  |||||  | | ||| |||||||||||||||| ||| |||||||||    
T  17435259 tgtcgatgtcggacacgacacgtgttcgacactgggacacgtctaatctgaaaagtgtccgtacttcatagc 17435330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 28152146 - 28152217
Alignment:
Q  9 gtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||| ||||| |||||||||||||| |||||| | | | |||||||| ||  ||||||||||||||||||    
T  28152146 gtgtcggtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 34595182 - 34595253
Alignment:
Q  9 gtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||| ||||| ||||||||||||||||||||| | | || ||||||| ||  ||||| ||||||||||||    
T  34595182 gtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 17327654 - 17327590
Alignment:
Q  16 tgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    ||||| ||||||||||||||||||||  | | |||||||||| ||  ||||| ||||||||||||    
T  17327654 tgtcggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 35056921 - 35056999
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatagc 81  Q
    |||||||||||| ||||| |||||||||||||| |||||   || |||||||||||||  ||||| |||||||||||||    
T  35056921 ggtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatagc 35056999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 36096381 - 36096343
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacac 41  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  36096381 ggtgtcgtgtcgatgtcggacacgacacgtgtctgacac 36096343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 10535734 - 10535685
Alignment:
Q  31 gtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||||||||||| | |||||||||| ||  ||||||||||||||||||    
T  10535734 gtgtctgacaccaggacacgcctaatccgaggagtgttcgtgcttcatag 10535685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 11223869 - 11223793
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||| ||| | ||||| ||||||||| ||||||||||| | | |||||||||||||  ||||| ||||||||||||    
T  11223869 ggtgtcatgtaggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 37419796 - 37419873
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||||||||| ||||| ||||||  |||||| |||||| | | |||||||||| ||  ||||| ||||||||||||    
T  37419796 ggtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 30404853 - 30404789
Alignment:
Q  17 gtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatagc 81  Q
    |||| ||||||||| |||| |||||||| | | ||||||||||| ||| ||| ||||||||||||    
T  30404853 gtcggacacgacacatgtccgacaccaggacatgcctaatctgagaagcgtttgtgcttcatagc 30404789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 30717534 - 30717458
Alignment:
Q  5 tgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatagc 81  Q
    |||||||||| ||||| |||||||||||||  |||||  | ||||||||||||  |  ||||| |||||||||||||    
T  30717534 tgtcgtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatagc 30717458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 241647 - 241724
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||||||| | ||||| |||||||||||||| |||||| | | |||||||||| || |||||| ||||||||||||    
T  241647 ggtgtcgtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 22234896 - 22234819
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||||||||| ||||  |||||||||||||| |||||||| | ||  |||||| || |||||||||||||||||||    
T  22234896 ggtgtcgtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcatag 22234819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 35161092 - 35161155
Alignment:
Q  17 gtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||| |||||||||||||| |||||| ||| || ||||||| ||||||||| ||||||||||||    
T  35161092 gtcggacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcatag 35161155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 30982884 - 30982808
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcata 79  Q
    |||||||||||| ||||  |||||||||||||| |||||| | | ||||||||||  || ||||| |||||||||||    
T  30982884 ggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 23292997 - 23292926
Alignment:
Q  9 gtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||| ||||| |||||||||||||| |||||| | | |||||||||| ||  ||||| ||||||||||||    
T  23292997 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 34306815 - 34306744
Alignment:
Q  9 gtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||| ||||| |||||||||||||| ||||||   | |||||||||||||  | ||||||||||||||||    
T  34306815 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatag 34306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 15724560 - 15724506
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatc 57  Q
    |||||||||||| ||||| |||| ||||||||| ||||||| || ||||||||||    
T  15724560 ggtgtcgtgtcggtgtcggacacaacacgtgtcagacaccaaaacacgcctaatc 15724506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 5654568 - 5654503
Alignment:
Q  15 atgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||| |||||| |||| || |||||| |||||||||||||| ||| ||| || |||||||||||    
T  5654568 atgtcggacacgatacgtatccgacaccggaatacgcctaatccgaagagtatttgtgcttcatag 5654503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 24613707 - 24613630
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||| ||||| ||||  ||||||||||||||||||||||| | ||| ||||||  |  ||||| ||||||||||||    
T  24613707 ggtgtcatgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcatag 24613630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 5944336 - 5944413
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    ||||||||||||||| || |||| |||| |||| |||||| | |||||||||||| ||  ||||||||||||||||||    
T  5944336 ggtgtcgtgtcgatgacggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 29163392 - 29163323
Alignment:
Q  9 gtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcat 78  Q
    |||||| ||||| |||||||||||| |||||||| | | ||| |||||| || |||||||||||||||||    
T  29163392 gtgtcggtgtcggacacgacacgtgcctgacaccgggacacggctaatcagagaagtgttcgtgcttcat 29163323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 47989550 - 47989627
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||||||||| ||||| ||||||||| ||||||||| | | | |||||||||| ||  ||||| ||||||||||||    
T  47989550 ggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 6427518 - 6427594
Alignment:
Q  4 gtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    ||||||||| |  |||| |||||||||||||| |||||| | | |||||||||||||  ||||| ||||||||||||    
T  6427518 gtgtcgtgtaggcgtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatag 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 32461464 - 32461392
Alignment:
Q  9 gtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatagc 81  Q
    |||||| ||||| ||||||||||||||||||||  | | ||||||||||  | |||||| |||||||||||||    
T  32461464 gtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatagc 32461392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 6612177 - 6612123
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatc 57  Q
    |||||||||||||||||| |||||| | ||||| |||||||| | ||||||||||    
T  6612177 ggtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatc 6612123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 17408763 - 17408821
Alignment:
Q  22 acacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||||||||||| |||||||  |||| ||||||||||| |||||  |||||||||||    
T  17408763 acacgacacgtgtccgacaccaagatacacctaatctgaagagtgtctgtgcttcatag 17408821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 25934673 - 25934746
Alignment:
Q  7 tcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||||| ||||| ||||||||||||||||||||  | |||||||| |||  |  ||||| ||||||||||||    
T  25934673 tcgtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcatag 25934746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 31694716 - 31694639
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||||||||| ||||| |||| |||| | |  |||||| ||| |||||||||||||  ||||| ||||||||||||    
T  31694716 ggtgtcgtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcatag 31694639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 40917802 - 40917879
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||||||||| ||| | |||||||||||||| |||||| | | |||||||||| ||  | ||| ||||||||||||    
T  40917802 ggtgtcgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcatag 40917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 21880200 - 21880271
Alignment:
Q  9 gtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||| ||||| ||||||||| |||| |||||||| | |||||||||| || |||||| ||||||||||||    
T  21880200 gtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 598256 - 598328
Alignment:
Q  9 gtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatagc 81  Q
    |||||| ||||  |||||||||||||| |||||| | | |||||||||| || |||||| |||||||||||||    
T  598256 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagc 598328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 4017777 - 4017729
Alignment:
Q  31 gtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||||||||  ||| ||||||||||| |||||||||||||||||||||    
T  4017777 gtgtctgacacg-gaacacgcctaatctaaaaagtgttcgtgcttcatag 4017729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 24339695 - 24339772
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||||||||| ||||| ||||||||||| || |||||| | | |||||||||| ||  ||||  ||||||||||||    
T  24339695 ggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 5409835 - 5409771
Alignment:
Q  16 tgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    ||||| |||||||||||||| |||||| | | |||||||||| ||  ||||| ||||||||||||    
T  5409835 tgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 15796300 - 15796222
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatagc 81  Q
    |||||||||| | ||||| |||| |||||||||  ||||| ||| ||||||||||  || |||||||||||||||||||    
T  15796300 ggtgtcgtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcatagc 15796222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 41961656 - 41961579
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    |||||||||||| | ||| |||||||||||||| |||||  | | |||||||||| || |||||| ||||||||||||    
T  41961656 ggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 34185129 - 34185052
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    ||||||||||| |||||| ||| |||| ||||| |||||| | | |||||||||| ||  ||||| ||||||||||||    
T  34185129 ggtgtcgtgtccatgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 14209167 - 14209243
Alignment:
Q  4 gtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatag 80  Q
    ||||||||||| ||||| |||||||||||||  |||| | | |||| |||||||  | |||||| ||||||||||||    
T  14209167 gtgtcgtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcatag 14209243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 55401123 - 55401195
Alignment:
Q  9 gtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttcatagc 81  Q
    |||||| ||||| |||||||||||||| ||||||   | |||||||||| ||  ||||| |||||||||||||    
T  55401123 gtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatagc 55401195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 70326 - 70394
Alignment:
Q  9 gtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatctgaaaagtgttcgtgcttca 77  Q
    |||||| ||||| |||||||||||||| |||||||| | | |||||||| ||  |||||||||||||||    
T  70326 gtgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 6002 - 5964
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacac 41  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  6002 ggtgtcgtatcggtgtcgaacacgacacgtgtctgacac 5964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 84979 - 84925
Alignment:
Q  3 ggtgtcgtgtcgatgtcgaacacgacacgtgtctgacaccagaatacgcctaatc 57  Q
    |||||| |||||||||||||||| ||||||||| |||| ||| | ||||||||||    
T  84979 ggtgtcatgtcgatgtcgaacacaacacgtgtccgacaacaggacacgcctaatc 84925  T

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