View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2766_low_40 (Length: 325)
Name: NF2766_low_40
Description: NF2766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2766_low_40 |
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Alignment Details
Target: chr8 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 36290957 - 36291263
Alignment:
| Q |
1 |
agcttgctcaacatggactaatgaaagtgatgaatcatcacgttggttagcactaacagatgattttgtagtggttctctttgaagtcacaaccattttg |
100 |
Q |
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| T |
36290957 |
agcttgctcaacatggactaatgaaagtgatgattcatcacgttggttagcactaacagaagattttgtagtggttctctttgaagtcacaaccattttg |
36291056 |
T |
|
| Q |
101 |
aggacacagcacaagttatgacaatgatagaagaaagtgaatacaaaaagccttttgtgaggtttataagatgaatgaatgaatagaggtttagctgaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36291057 |
aggacacagcacaagttatgacaatgatagaagaaagtgaatacaaaaagccttttgtgaggtttataagatgaatgaatgaatagaggtttagctgaaa |
36291156 |
T |
|
| Q |
201 |
tgcatatttatagagtgcctaattaaggggaaaatgaaatgaagggaaagagggtcgattggtatcttgtagctaatggagtttagttgaggtttacagg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
36291157 |
tgcatatttatagagtgcctaattaaggggaaaatgaaatgaagggaaagagggtcgattggtatcttgtagttaatggagtttagttgaggtttacagg |
36291256 |
T |
|
| Q |
301 |
ggaattg |
307 |
Q |
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||||||| |
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| T |
36291257 |
ggaattg |
36291263 |
T |
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