View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2766_low_69 (Length: 228)
Name: NF2766_low_69
Description: NF2766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2766_low_69 |
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Alignment Details
Target: chr8 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 22846151 - 22845931
Alignment:
| Q |
1 |
atattttggatttggttcaccgatata--attgttagagaaacattagttatcccaattcgaaaaggggtgagtttccttagaaagatggaaaagctgaa |
98 |
Q |
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| T |
22846151 |
atattttggatttggttcaccgatatataattgttagagaagcattagttatcccaattcgaaaatgggtgagtttccttagaaagatggaaaagctgaa |
22846052 |
T |
|
| Q |
99 |
t---------ccttgttttcattacacgatagaatacaaacaccgttataaagtaacaaactccctacattcacgagaaactgcataatagacacgacat |
189 |
Q |
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| T |
22846051 |
taattacttgccttgttttcattacacgatagaatacaaacaccattataaagtaacaaactccctacattcatgagaaactgcataatagaaacgacat |
22845952 |
T |
|
| Q |
190 |
aatttaaaagaggtttaaatg |
210 |
Q |
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|||||||| |||||||||||| |
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| T |
22845951 |
aatttaaatgaggtttaaatg |
22845931 |
T |
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