View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2767_high_27 (Length: 308)
Name: NF2767_high_27
Description: NF2767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2767_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 10 - 290
Target Start/End: Original strand, 4565704 - 4565981
Alignment:
| Q |
10 |
attatactaccaattcttttgccaacaaaagaggcttatattatttttgatagtgaagtatttattacatgaatgctatattttacctaaaagaagtttt |
109 |
Q |
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| T |
4565704 |
attatactaccaattcttttgccaacaaaagaggcttatattatttttgatagtgaagtatttattacatgaatgctacattttacctaaaagaagtttt |
4565803 |
T |
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| Q |
110 |
ggagaatgcatttgtagagcagaggagaaacataaatacatccattgaagtctcttaaaagctcaaattttggaccttgtgaaaaagggaattgaatagt |
209 |
Q |
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| T |
4565804 |
ggagaatgcatttgtagagcagag---aaacataaatacatccattgaagtctcttaaaagctcaaattttggaccttgtgaaaaagggaattgaatagt |
4565900 |
T |
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| Q |
210 |
gttataggaaatggaatattaatagctctgttgtattaccactctgttgtattaccaacctagaaagtggcaggacttgtt |
290 |
Q |
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| T |
4565901 |
gttataggaaatggaatattaatagctctgttgtattaccactctgttgtattaccaacctagaaagtggcaggacttgtt |
4565981 |
T |
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