View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2767_high_29 (Length: 304)
Name: NF2767_high_29
Description: NF2767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2767_high_29 |
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Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 33 - 282
Target Start/End: Original strand, 34076962 - 34077210
Alignment:
| Q |
33 |
atttcagtctcaaaccctaaatcacnnnnnnncagagttattactattattaccacctaagaaacacaaacaccagacacacgctaaaataactattacc |
132 |
Q |
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| T |
34076962 |
atttcagtctcaaaccctaaatcacaaaaaaa-agagttattactattattaccacctaagaaacacaaacaccagacacacgctaaaataactattacc |
34077060 |
T |
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| Q |
133 |
atcgttaagtttaggtttaggatgaattttaacatcaccaaaaacacgtttataattaagaaaattctcccaatgaataaccccatcattccaattgaaa |
232 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34077061 |
atcgttaagtttaggtttaggatgaattttaacatcaccaaaaacacgtttataattaagaaaattctcccaatgaataaccccatcattccaattgaaa |
34077160 |
T |
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| Q |
233 |
ccatgatcattggattgaatcttgtgtttaacaccaatatactgatgacg |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34077161 |
ccatgatcattggattgaatcttgtgtttaacaccaatatactgatgacg |
34077210 |
T |
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