View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2767_low_48 (Length: 256)

Name: NF2767_low_48
Description: NF2767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2767_low_48
NF2767_low_48
[»] chr8 (30 HSPs)
chr8 (12-236)||(34687661-34687886)
chr8 (22-144)||(9710216-9710338)
chr8 (22-146)||(34439514-34439638)
chr8 (25-140)||(18935342-18935457)
chr8 (37-146)||(4623406-4623515)
chr8 (12-143)||(16049760-16049889)
chr8 (22-146)||(34439220-34439344)
chr8 (22-144)||(7645074-7645196)
chr8 (22-146)||(18429614-18429737)
chr8 (23-143)||(18548539-18548659)
chr8 (19-146)||(18935051-18935178)
chr8 (22-144)||(4623069-4623191)
chr8 (12-144)||(16049480-16049612)
chr8 (23-146)||(7644778-7644900)
chr8 (22-143)||(7535544-7535665)
chr8 (12-146)||(25879566-25879699)
chr8 (65-146)||(18429440-18429521)
chr8 (12-144)||(21445985-21446115)
chr8 (12-78)||(18429479-18429545)
chr8 (26-124)||(25879849-25879947)
chr8 (31-92)||(4623371-4623432)
chr8 (24-146)||(32665840-32665961)
chr8 (58-143)||(3016008-3016093)
chr8 (24-78)||(23871164-23871218)
chr8 (82-146)||(7535298-7535362)
chr8 (12-116)||(164982-165086)
chr8 (67-143)||(23871002-23871078)
chr8 (38-80)||(3111732-3111774)
chr8 (23-120)||(18548825-18548922)
chr8 (38-78)||(23871038-23871078)
[»] chr4 (59 HSPs)
chr4 (12-144)||(45505340-45505472)
chr4 (12-146)||(11306534-11306668)
chr4 (12-146)||(49984079-49984213)
chr4 (12-146)||(17524202-17524336)
chr4 (22-146)||(18414977-18415101)
chr4 (12-141)||(4592636-4592765)
chr4 (12-143)||(4416758-4416889)
chr4 (12-146)||(4416474-4416608)
chr4 (12-146)||(17524484-17524618)
chr4 (12-146)||(45505057-45505191)
chr4 (12-146)||(49983791-49983925)
chr4 (12-144)||(48845994-48846126)
chr4 (14-144)||(43913394-43913524)
chr4 (22-144)||(46397306-46397428)
chr4 (22-146)||(31141677-31141801)
chr4 (22-146)||(48845710-48845834)
chr4 (12-143)||(36752860-36752991)
chr4 (12-143)||(20269145-20269276)
chr4 (23-146)||(37724437-37724560)
chr4 (12-126)||(18414740-18414854)
chr4 (41-141)||(12292892-12292992)
chr4 (12-146)||(2516470-2516604)
chr4 (12-125)||(54702270-54702384)
chr4 (12-108)||(20870864-20870959)
chr4 (22-146)||(48658323-48658447)
chr4 (23-146)||(12293189-12293312)
chr4 (25-143)||(52485343-52485461)
chr4 (12-144)||(52485622-52485755)
chr4 (22-124)||(16399206-16399308)
chr4 (12-93)||(2515740-2515821)
chr4 (65-146)||(45170849-45170930)
chr4 (67-145)||(5665779-5665857)
chr4 (12-74)||(37724705-37724767)
chr4 (12-74)||(45170696-45170758)
chr4 (36-145)||(20870799-20870906)
chr4 (65-145)||(37724729-37724809)
chr4 (67-146)||(20871138-20871216)
chr4 (22-79)||(20268930-20268988)
chr4 (67-146)||(31143734-31143813)
chr4 (15-78)||(40426092-40426154)
chr4 (12-71)||(45170825-45170884)
chr4 (12-73)||(20871112-20871173)
chr4 (22-78)||(5665763-5665819)
chr4 (58-141)||(38916952-38917035)
chr4 (26-124)||(12714770-12714868)
chr4 (66-144)||(24671952-24672030)
chr4 (70-123)||(4592399-4592452)
chr4 (41-74)||(4592419-4592452)
chr4 (12-117)||(16398941-16399045)
chr4 (32-89)||(21376104-21376161)
chr4 (66-146)||(5688728-5688808)
chr4 (38-74)||(12292930-12292966)
chr4 (65-112)||(40426087-40426133)
chr4 (65-120)||(45170679-45170734)
chr4 (67-144)||(20268894-20268972)
chr4 (22-63)||(24672004-24672045)
chr4 (102-143)||(36752993-36753034)
chr4 (38-78)||(31143734-31143774)
chr4 (12-92)||(43913674-43913754)
[»] scaffold0548 (1 HSPs)
scaffold0548 (12-146)||(3312-3446)
[»] chr1 (37 HSPs)
chr1 (12-144)||(48171717-48171849)
chr1 (12-146)||(42604628-42604762)
chr1 (12-146)||(31872880-31873013)
chr1 (22-144)||(143104-143226)
chr1 (12-146)||(8718477-8718611)
chr1 (12-146)||(19987332-19987466)
chr1 (12-146)||(33459893-33460027)
chr1 (12-146)||(42604910-42605044)
chr1 (12-135)||(34518235-34518358)
chr1 (12-144)||(35795597-35795729)
chr1 (12-146)||(35795311-35795445)
chr1 (12-144)||(37245637-37245769)
chr1 (12-143)||(33460171-33460297)
chr1 (22-143)||(34517965-34518086)
chr1 (25-144)||(142811-142930)
chr1 (12-143)||(3072979-3073110)
chr1 (12-143)||(22792558-22792689)
chr1 (12-146)||(3075201-3075326)
chr1 (55-144)||(48171442-48171531)
chr1 (12-144)||(14420060-14420192)
chr1 (23-144)||(22792290-22792411)
chr1 (22-146)||(18519315-18519439)
chr1 (25-144)||(19987627-19987746)
chr1 (65-143)||(31872709-31872787)
chr1 (22-74)||(31872749-31872801)
chr1 (24-120)||(13189177-13189273)
chr1 (51-143)||(36783398-36783489)
chr1 (67-146)||(25622606-25622685)
chr1 (41-132)||(30971835-30971926)
chr1 (12-78)||(18519599-18519665)
chr1 (69-143)||(18519627-18519701)
chr1 (12-78)||(25622645-25622711)
chr1 (96-146)||(37245933-37245983)
chr1 (36-78)||(48171479-48171521)
chr1 (32-146)||(6043446-6043557)
chr1 (80-125)||(14419839-14419884)
chr1 (96-146)||(8718405-8718455)
[»] chr6 (36 HSPs)
chr6 (12-146)||(17342886-17343020)
chr6 (12-146)||(22793299-22793433)
chr6 (22-136)||(10567471-10567585)
chr6 (22-143)||(32629064-32629185)
chr6 (12-146)||(10567742-10567875)
chr6 (26-144)||(34829850-34829968)
chr6 (28-143)||(28613463-28613578)
chr6 (28-146)||(6611934-6612052)
chr6 (28-119)||(6611636-6611727)
chr6 (36-135)||(29674857-29674956)
chr6 (12-108)||(29674913-29675009)
chr6 (22-142)||(6273878-6273997)
chr6 (22-146)||(11122192-11122315)
chr6 (65-143)||(22793601-22793679)
chr6 (41-124)||(28705819-28705902)
chr6 (26-120)||(32629345-32629439)
chr6 (65-141)||(6273620-6273696)
chr6 (23-78)||(22793588-22793643)
chr6 (12-78)||(6273654-6273720)
chr6 (12-62)||(17343165-17343215)
chr6 (70-143)||(34829582-34829655)
chr6 (23-74)||(28613236-28613287)
chr6 (42-123)||(13498388-13498469)
chr6 (65-146)||(28613193-28613274)
chr6 (31-135)||(6209842-6209946)
chr6 (19-107)||(28705769-28705856)
chr6 (36-79)||(11121934-11121977)
chr6 (37-143)||(19279286-19279392)
chr6 (70-146)||(7213362-7213436)
chr6 (66-124)||(6210284-6210342)
chr6 (38-107)||(11121935-11122005)
chr6 (12-74)||(34829622-34829684)
chr6 (12-65)||(2594230-2594283)
chr6 (25-90)||(24394039-24394104)
chr6 (15-63)||(7213336-7213384)
chr6 (67-146)||(29675176-29675256)
[»] scaffold0056 (2 HSPs)
scaffold0056 (12-146)||(63004-63138)
scaffold0056 (12-146)||(62724-62858)
[»] chr2 (46 HSPs)
chr2 (12-146)||(44995340-44995473)
chr2 (12-145)||(29526874-29527007)
chr2 (15-146)||(26845464-26845596)
chr2 (12-143)||(32622469-32622600)
chr2 (12-146)||(3217283-3217417)
chr2 (12-146)||(15988530-15988663)
chr2 (12-146)||(27956723-27956857)
chr2 (15-146)||(43971797-43971928)
chr2 (12-146)||(13490172-13490306)
chr2 (34-146)||(13140288-13140400)
chr2 (12-143)||(6795452-6795583)
chr2 (23-146)||(14473821-14473944)
chr2 (25-144)||(29526596-29526714)
chr2 (23-146)||(3221118-3221241)
chr2 (24-145)||(24065872-24065994)
chr2 (12-143)||(24284080-24284211)
chr2 (47-146)||(39060306-39060405)
chr2 (25-143)||(24015813-24015930)
chr2 (23-137)||(27957012-27957126)
chr2 (22-146)||(1352830-1352954)
chr2 (12-142)||(13490454-13490583)
chr2 (22-147)||(43513849-43513974)
chr2 (12-74)||(1353112-1353174)
chr2 (69-146)||(32622216-32622293)
chr2 (75-146)||(3217498-3217569)
chr2 (31-146)||(6412463-6412577)
chr2 (67-146)||(13140598-13140677)
chr2 (12-78)||(32622255-32622321)
chr2 (65-143)||(1353136-1353214)
chr2 (96-146)||(14424237-14424287)
chr2 (12-78)||(15988048-15988113)
chr2 (40-140)||(37762315-37762415)
chr2 (12-79)||(13140572-13140639)
chr2 (27-73)||(14473548-14473594)
chr2 (81-146)||(15988011-15988074)
chr2 (12-122)||(38262812-38262922)
chr2 (65-146)||(14473504-14473585)
chr2 (105-146)||(43971651-43971692)
chr2 (80-140)||(6795185-6795245)
chr2 (22-86)||(13525269-13525333)
chr2 (67-142)||(36006244-36006319)
chr2 (36-74)||(39060349-39060387)
chr2 (23-64)||(32644048-32644089)
chr2 (46-78)||(3217498-3217530)
chr2 (23-79)||(32644402-32644458)
chr2 (99-143)||(36122064-36122108)
[»] chr7 (24 HSPs)
chr7 (22-146)||(22566301-22566423)
chr7 (31-143)||(7460572-7460684)
chr7 (12-146)||(36469815-36469948)
chr7 (12-123)||(6376387-6376498)
chr7 (23-143)||(34535695-34535812)
chr7 (12-144)||(48461793-48461924)
chr7 (12-143)||(48462073-48462205)
chr7 (12-143)||(34535964-34536095)
chr7 (33-143)||(24185670-24185779)
chr7 (12-143)||(6376640-6376771)
chr7 (67-146)||(24188205-24188284)
chr7 (22-144)||(43510880-43511001)
chr7 (66-143)||(7460876-7460953)
chr7 (66-146)||(17813974-17814054)
chr7 (12-78)||(7460851-7460917)
chr7 (22-78)||(24188189-24188245)
chr7 (32-143)||(10017894-10018005)
chr7 (22-92)||(8560681-8560751)
chr7 (32-124)||(9997935-9998027)
chr7 (23-81)||(7149974-7150032)
chr7 (69-143)||(43511188-43511262)
chr7 (12-65)||(10017671-10017724)
chr7 (37-78)||(17814013-17814054)
chr7 (31-63)||(43511179-43511211)
[»] chr3 (18 HSPs)
chr3 (12-143)||(54341204-54341335)
chr3 (12-146)||(33419822-33419956)
chr3 (12-146)||(48618478-48618612)
chr3 (22-144)||(33241846-33241968)
chr3 (23-123)||(30548023-30548125)
chr3 (12-146)||(37285546-37285680)
chr3 (22-144)||(37285838-37285960)
chr3 (12-117)||(19540851-19540956)
chr3 (22-135)||(51388049-51388162)
chr3 (31-146)||(48618781-48618896)
chr3 (22-92)||(33419592-33419662)
chr3 (27-146)||(19541129-19541248)
chr3 (12-108)||(7015372-7015469)
chr3 (31-116)||(40484929-40485013)
chr3 (42-143)||(54111417-54111518)
chr3 (36-146)||(30547738-30547846)
chr3 (23-74)||(39639849-39639900)
chr3 (12-89)||(7015608-7015685)
[»] chr5 (16 HSPs)
chr5 (22-146)||(33992333-33992457)
chr5 (12-143)||(16642751-16642882)
chr5 (23-146)||(33992627-33992750)
chr5 (25-146)||(19935432-19935552)
chr5 (22-143)||(25508095-25508216)
chr5 (25-143)||(19328409-19328527)
chr5 (22-92)||(34065283-34065353)
chr5 (12-125)||(32291075-32291188)
chr5 (40-116)||(32290831-32290905)
chr5 (36-79)||(34065326-34065369)
chr5 (69-143)||(16643054-16643128)
chr5 (52-146)||(18697490-18697584)
chr5 (47-132)||(5479981-5480066)
chr5 (22-74)||(19935720-19935772)
chr5 (23-115)||(25507830-25507921)
chr5 (23-79)||(34065589-34065645)
[»] scaffold0400 (3 HSPs)
scaffold0400 (24-145)||(9865-9986)
scaffold0400 (49-146)||(9577-9674)
scaffold0400 (36-70)||(9624-9658)
[»] scaffold0365 (3 HSPs)
scaffold0365 (24-145)||(10508-10629)
scaffold0365 (49-146)||(10220-10317)
scaffold0365 (36-70)||(10267-10301)
[»] scaffold0015 (2 HSPs)
scaffold0015 (73-146)||(47417-47490)
scaffold0015 (96-143)||(47291-47338)
[»] scaffold0045 (1 HSPs)
scaffold0045 (73-146)||(29608-29681)


Alignment Details
Target: chr8 (Bit Score: 181; Significance: 7e-98; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 12 - 236
Target Start/End: Complemental strand, 34687886 - 34687661
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34687886 ttattctaaagtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttaaaaccta 34687787  T
Q  112 aaataaacataaggggtcaaacatgcaattaagccggcaaaatctatagtg-nnnnnnngtagaaaactcaacaaaatcattgatgatttcataatattg 210  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||    
T  34687786 aaataaacataaggggtcaaacatgcaattaaaccggcaaaatctatagtgttttttttttagaaaactcaacaaaatcattgatgatttcataatattg 34687687  T
Q  211 aagtgaagcttgatgacaaggataaa 236  Q
    ||||||||||||||||||||||||||    
T  34687686 aagtgaagcttgatgacaaggataaa 34687661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 9710338 - 9710216
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||| | |||||||| ||| |||||||||||||    
T  9710338 gtgagtaacgttttggaccaacttgaaacttttaaaatgtaagggaccaacttgaaacttttaaaacataagggaccaacttaaaaactaaaataaacat 9710239  T
Q  122 aaggggtcaaacatgcaattaag 144  Q
    ||||| |||||||||||||||||    
T  9710238 aagggatcaaacatgcaattaag 9710216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 22 - 146
Target Start/End: Original strand, 34439514 - 34439638
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||| || ||| |||||||||||||    
T  34439514 gtgagtaacgttttggaccaactttaaacttttaaaacgtaagggaccaacttgaaacttttaaaacatgaaggaccaatttaaaaactaaaataaacat 34439613  T
Q  122 aaggggtcaaacatgcaattaagcc 146  Q
    ||||| |||||||||||||||||||    
T  34439614 aagggatcaaacatgcaattaagcc 34439638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 18935342 - 18935457
Alignment:
Q  25 agtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataag 124  Q
    |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||| | |||||| ||||||||||||||||||||||    
T  18935342 agtaacgtttgggaccaacttgaaacttttaaaacacaagagaccaacttgaaacttttaaaacataagggaccaacatgaaacctaaaataaacataag 18935441  T
Q  125 gggtcaaacatgcaat 140  Q
    ||  ||||||||||||    
T  18935442 ggaccaaacatgcaat 18935457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 146
Target Start/End: Original strand, 4623406 - 4623515
Alignment:
Q  37 gaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatg 136  Q
    |||||||||||||||||||||||||||| ||| | ||||||| ||||||||||||||| | |||||||||| |||||||||||||||||| |||||||||    
T  4623406 gaccaacttgaaacttttaaaacataagtgactatcttgaaacttttaaaacataaaggatcaacttgaaaactaaaataaacataagggatcaaacatg 4623505  T
Q  137 caattaagcc 146  Q
    ||||||||||    
T  4623506 caattaagcc 4623515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 16049760 - 16049889
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||||||||| |||||||||||||||||||||||||||| ||||  | |||||| ||| ||||||||||||| | |||||||||||| |||    
T  16049760 ttattccaacgtgagtaacattttggaccaacttgaaacttttaaaacgtaag--atcaacttaaaacttttaaaacataagggaccaacttgaaaacta 16049857  T
Q  112 aaataaacataaggggtcaaacatgcaattaa 143  Q
    ||||||||||||||| ||||||||||||||||    
T  16049858 aaataaacataagggatcaaacatgcaattaa 16049889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 34439344 - 34439220
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||||||||||||  ||||||||| ||| |||||||||| ||| |||||||||||||    
T  34439344 gtgaataacgttttggaccaacttgaatcttttaaaacgtaagggaccaacttgaatcttttaaaacctaacgaaccaacttaaaaactaaaataaacat 34439245  T
Q  122 aaggggtcaaacatgcaattaagcc 146  Q
    ||| | |||||||| ||||||||||    
T  34439244 aagagatcaaacatacaattaagcc 34439220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 7645074 - 7645196
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||| |||||||| |||||| || ||||| ||| |||||||||||||    
T  7645074 gtgagtaacgttttggatcaacttgaaacttttaaaatgtaagggatcaacttgaaacttttaaaatataaaggactaacttaaaaactaaaataaacat 7645173  T
Q  122 aaggggtcaaacatgcaattaag 144  Q
    ||||| |||||||||| ||||||    
T  7645174 aagggatcaaacatgcgattaag 7645196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 146
Target Start/End: Original strand, 18429614 - 18429737
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||||||||| ||  ||||| |||||| || ||||||||||    
T  18429614 gtgagtaacgttttggaccaacttaaaacttttaaaacgtaagggaccaactttaaacttttaaaacatgaaagaccaatttgaaaact-aaataaacat 18429712  T
Q  122 aaggggtcaaacatgcaattaagcc 146  Q
    ||||| ||||||||| |||||||||    
T  18429713 aagggatcaaacatgaaattaagcc 18429737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 143
Target Start/End: Complemental strand, 18548659 - 18548539
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacata 122  Q
    ||||||| ||||||||||||||| |||| |||||||| ||||  |||||||| ||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  18548659 tgagtaatgttttggaccaacttaaaacctttaaaacgtaagaaaccaacttaaaacttttaaaacataaagtaccaacttaaaacctaaaataaacata 18548560  T
Q  123 aggggtcaaacatgcaattaa 143  Q
    |||  ||||||||||||||||    
T  18548559 aggaatcaaacatgcaattaa 18548539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 18935178 - 18935051
Alignment:
Q  19 aaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaa 118  Q
    |||||||||||| ||||| ||||| |||||||||||| |||||||||||||||||| ||| |||||||||| || | |||||||| |||| |||||||||    
T  18935178 aaggtgagtaacattttgaaccaatttgaaacttttataacataagggaccaacttaaaagttttaaaacaaaagggaccaacttaaaacttaaaataaa 18935079  T
Q  119 cataaggggtcaaacatgcaattaagcc 146  Q
    |||||| |  ||||||||||||||||||    
T  18935078 cataagagaccaaacatgcaattaagcc 18935051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 4623191 - 4623069
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    ||||||||| ||||||||||||||||||| |||||||| |||| ||||||||| ||| ||||||||||||| | | ||| || ||| |||||||||||||    
T  4623191 gtgagtaacattttggaccaacttgaaacctttaaaacgtaagagaccaacttaaaacttttaaaacataagggatcaatttaaaaactaaaataaacat 4623092  T
Q  122 aaggggtcaaacatgcaattaag 144  Q
    ||||| |||||||||||||||||    
T  4623091 aagggatcaaacatgcaattaag 4623069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 16049612 - 16049480
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||| |||||||||||||||||||||||| |||||||||  ||||||||||||| ||| ||||||||||||| ||||||| || ||| | |    
T  16049612 ttattccaatgtgggtaacgttttggaccaacttgaaatttttaaaacgaaagggaccaacttaaaacttttaaaacataaggaaccaaattaaaaacca 16049513  T
Q  112 aaataaacataaggggtcaaacatgcaattaag 144  Q
    ||||||||||| ||| || ||||||||||||||    
T  16049512 aaataaacatacgggatcgaacatgcaattaag 16049480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 146
Target Start/End: Complemental strand, 7644900 - 7644778
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacata 122  Q
    ||||||| |||| |||||||||| ||| ||||||||| ||||||| |||||||||| ||||||||||||| | |||||||| ||| ||||||||||||||    
T  7644900 tgagtaatgtttcggaccaacttaaaatttttaaaacgtaagggatcaacttgaaacttttaaaacataagggaccaacttaaaaactaaaataaacata 7644801  T
Q  123 aggggtcaaacatgcaattaagcc 146  Q
    | || |||||||||||||||||||    
T  7644800 a-ggatcaaacatgcaattaagcc 7644778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 7535544 - 7535665
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||||||||||||||||||||||| |||| | |||||  |||||||||||||||||  ||||||||||||| |  ||||||||||||| |||||||| ||    
T  7535544 gtgagtaacgttttggaccaacttaaaacctgtaaaatgtaagggaccaacttgaatcttttaaaacataaggggccaacttgaaaccaaaaataaatat 7535643  T
Q  122 aaggggtcaaacatgcaattaa 143  Q
    ||||  ||||||||||||||||    
T  7535644 aaggaatcaaacatgcaattaa 7535665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 25879699 - 25879566
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||| ||||||||||| || ||||||||||| ||||||| |||| |||||| || ||| ||||||||||||| | |||||||| ||| | |    
T  25879699 ttattccaacgtgggtaacgttttgaactaacttgaaactattaaaacgtaagtgaccaatttaaaacttttaaaacataatggaccaacttaaaaacaa 25879600  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||  | |||||||||||||||||||    
T  25879599 aaataaacataa-agatcaaacatgcaattaagcc 25879566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 18429521 - 18429440
Alignment:
Q  65 ggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||||||||| |||||||| |||| | |||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  18429521 ggaccaacttgaaacttttaaaatataagggaccaacttgaaaactaaaataaacataagagatcaaacatgcaattaagcc 18429440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 21446115 - 21445985
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||||||| ||||||||| ||||| | ||||||||||| |||||||| |||| |||||||   ||| ||||||||| ||| | |||||||| ||| |||    
T  21446115 ttattctaatgtgagtaacattttgaaacaacttgaaacctttaaaacgtaagagaccaaca--aaacttttaaaacgtaagggaccaacttaaaatcta 21446018  T
Q  112 aaataaacataaggggtcaaacatgcaattaag 144  Q
    ||||||| |||||||  ||||||||||||||||    
T  21446017 aaataaatataagggaccaaacatgcaattaag 21445985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 18429545 - 18429479
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaa 78  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  18429545 ttattctaacgtgagtaatattttggaccaacttgaaacttttaaaatataagggaccaacttgaaa 18429479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 124
Target Start/End: Original strand, 25879849 - 25879947
Alignment:
Q  26 gtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataag 124  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||||||||||| |||||| ||| ||   || ||||| ||| ||||||||||||||||    
T  25879849 gtaacattttgaaccaacttgaaacttttaaaatataagggaccaacttgaaacttttaagacacaagacactaacttcaaatctaaaataaacataag 25879947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 4623371 - 4623432
Alignment:
Q  31 gttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataa 92  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  4623371 gtttttgaccaacttgaaacttttaaaacataagtgaccaacttgaaacttttaaaacataa 4623432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 32665840 - 32665961
Alignment:
Q  24 gagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataa 123  Q
    |||||| ||||||||||||||| ||||| |||||||||||||| |||| || ||| |||| |||  |||||  ||||||| |||||| ||||||||||||    
T  32665840 gagtaaagttttggaccaacttaaaactcttaaaacataagggtccaatttaaaactttt-aaatgtaaaggtccaacttaaaacctgaaataaacataa 32665938  T
Q  124 ggggtcaaacatgcaattaagcc 146  Q
    | |  |  |||||||||||||||    
T  32665939 gagaccgcacatgcaattaagcc 32665961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 3016008 - 3016093
Alignment:
Q  58 acataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaa 143  Q
    |||||||||| |||||||||| |||| ||| ||   | |||||||||||||||||||||||| ||||||  |||||||||||||||    
T  3016008 acataagggatcaacttgaaactttttaaagatgggggaccaacttgaaacctaaaataaacttaagggaccaaacatgcaattaa 3016093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 23871218 - 23871164
Alignment:
Q  24 gagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaa 78  Q
    ||||||| ||||||||||||||||||| ||||||| || ||||||||||||||||    
T  23871218 gagtaacattttggaccaacttgaaacctttaaaatatgagggaccaacttgaaa 23871164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 7535362 - 7535298
Alignment:
Q  82 ttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||  |||||||| |||| ||||||||||||||| |  ||||||||||||||||||    
T  7535362 ttaaaacataaaagaccaacttaaaacgtaaaataaacataagagaccaaacatgcaattaagcc 7535298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 165086 - 164982
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||||||||||||||  ||| | || |||  ||||||||||||| ||| ||||| ||| |||||||||||||   |||||| |||||| ||    
T  165086 ttattcaaatgtgagtaacgttttataccgatttaaaatgtttaaaacataagagacaaacttaaaacttttaaaacataagagaccaacatgaaactta 164987  T
Q  112 aaata 116  Q
    |||||    
T  164986 aaata 164982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 23871078 - 23871002
Alignment:
Q  67 accaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaa 143  Q
    |||||||||||| |||||| |||||| | || ||||||||||  |||||||||||||| |  |||||| ||||||||    
T  23871078 accaacttgaaaattttaatacataagggacaaacttgaaactcaaaataaacataagagaccaaacaagcaattaa 23871002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 3111732 - 3111774
Alignment:
Q  38 accaacttgaaacttttaaaacataagggaccaacttgaaatt 80  Q
    ||||||||||||||||| |||| || |||||||||||||||||    
T  3111732 accaacttgaaactttttaaacttaggggaccaacttgaaatt 3111774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 18548825 - 18548922
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaaca 120  Q
    |||| |||||| || ||||| ||| |||||| ||||| |||| ||| ||||  ||| |||||||| ||||   |||||||| ||||||||||||||||    
T  18548825 tgagcaacgttgtgaaccaatttgcaactttgaaaacgtaagagacaaactcaaaacttttaaaatataagagaccaacttaaaacctaaaataaaca 18548922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 23871078 - 23871038
Alignment:
Q  38 accaacttgaaacttttaaaacataagggaccaacttgaaa 78  Q
    |||||||||||| |||||| ||||||||||| |||||||||    
T  23871078 accaacttgaaaattttaatacataagggacaaacttgaaa 23871038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 45505340 - 45505472
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| | |||||||||||| |||    
T  45505340 ttattctaatgtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaacttgaaacttttaaaacataagggaccaacttgaaaacta 45505439  T
Q  112 aaataaacataaggggtcaaacatgcaattaag 144  Q
    ||||||||||||||| |||||||||||||||||    
T  45505440 aaataaacataagggatcaaacatgcaattaag 45505472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 11306534 - 11306668
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| | |||||||||||| |||    
T  11306534 ttattccaaagtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaacttgaaacttttaaaacataagggaccaacttgaaaacta 11306633  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||| |||||||||||||||||||    
T  11306634 aaataaacataagggatcaaacatgcaattaagcc 11306668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 49984079 - 49984213
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  49984079 ttattccaacgtgagtaacgttttggaccaacttgaaaactttaaaacataagggaccaacttgaaacttttaaaacataaggaaccaacatgaaaccta 49984178  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||| |||||||||||||||||||    
T  49984179 aaataaacataagggatcaaacatgcaattaagcc 49984213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 17524336 - 17524202
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||||||||||||||||| ||| ||||||||||||||||||||| || |||||||||| ||||||||||||| | |||||||||||| |||    
T  17524336 ttattccaatgtgagtaacgttttggatcaatttgaaacttttaaaacataagagatcaacttgaaacttttaaaacataagggaccaacttgaaaacta 17524237  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||| |||||||||||||||||||    
T  17524236 aaataaacataagggatcaaacatgcaattaagcc 17524202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 22 - 146
Target Start/End: Original strand, 18414977 - 18415101
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||| ||| | |||||||||| |||||||||||||    
T  18414977 gtgagtaacgttttggaccaacttgaaacttttaaaacgcaagggaccaacttgaaacttttaaaacatgaaggatcaacttgaaaactaaaataaacat 18415076  T
Q  122 aaggggtcaaacatgcaattaagcc 146  Q
    ||||| |||||||| ||||||||||    
T  18415077 aagggatcaaacatacaattaagcc 18415101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 4592636 - 4592765
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||||   |||||||| |||||||    
T  4592636 ttattctaatgtgagtaacgttttgaaccaacttgaaactgttaaaacataagggaccaacttaaaacttttaaaacataagagaccaacttaaaaccta 4592735  T
Q  112 aaataaacataaggggtcaaacatgcaatt 141  Q
    |||||||||||||||  |||||||||||||    
T  4592736 aaataaacataagggaccaaacatgcaatt 4592765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 4416758 - 4416889
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||||||||||||| ||||||||||||  |||||||||||||| ||||||||||||||||| | |||||||| ||| |||    
T  4416758 ttattccaatgtgagtaacgttttggaccaacttaaaacttttaaaatgtaagggaccaacttaaaatttttaaaacataagggaccaacttaaaaacta 4416857  T
Q  112 aaataaacataaggggtcaaacatgcaattaa 143  Q
    ||||||||||||| | ||||||||||||||||    
T  4416858 aaataaacataagagatcaaacatgcaattaa 4416889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 4416608 - 4416474
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||| | | |||||| ||| |||    
T  4416608 ttattccaacgtgagtaacgttttggaccaacttgaaacttttaaaacgtaaaggaccaacttgaaacttttaaaacataagggatcaacttaaaaacta 4416509  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||  |||||| |||||||||||||||||||    
T  4416508 aaataaatgtaagggatcaaacatgcaattaagcc 4416474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 17524484 - 17524618
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || || ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| |||||||| |||||| |||||||||||| |||    
T  17524484 ttattccaacgtaagtaacgttttggtccaacttaaaacttttaaaacataagggatcaacttgaaacttttaaaaaataaagtaccaacttgaaaacta 17524583  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||| |||| | |||||||||||||||||||    
T  17524584 aaataaacgtaagagatcaaacatgcaattaagcc 17524618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 45505191 - 45505057
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||||||| |||||||||||||||||||||||||||||| ||||| |||||| ||||| ||||||||||| |  ||||||||| ||| |||    
T  45505191 ttattccaacgtgagtagcgttttggaccaacttgaaacttttaaaacgtaaggaaccaacatgaaacttttaaaacattagtaaccaacttaaaaacta 45505092  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||| |||||||||||||||||||    
T  45505091 aaataaacataagggatcaaacatgcaattaagcc 45505057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 49983925 - 49983791
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||||||||||||||| |||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||| |||    
T  49983925 ttattcaaatgtgagtaacgttttgaaccaacttaaaatttttaaaacataagggaccaacttcaaacttttaaaacataaaggaccaacttgaaatcta 49983826  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||| || |||||  ||||||||||||||||||    
T  49983825 aaataagcacaagggaccaaacatgcaattaagcc 49983791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 48845994 - 48846126
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||| | ||||||||||||||||||||||||||| |||| ||| ||| ||||||||||||| | |||||||| |||  ||    
T  48845994 ttattccaacgtgagtaacgttttagtccaacttgaaacttttaaaacataaggcaccatcttaaaacttttaaaacataagggaccaacttaaaaagta 48846093  T
Q  112 aaataaacataaggggtcaaacatgcaattaag 144  Q
    ||||||||||||||| |||||||||||||||||    
T  48846094 aaataaacataagggatcaaacatgcaattaag 48846126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 43913524 - 43913394
Alignment:
Q  14 attctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaa 113  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| |||  |||||| || ||| |||||||| |||| | |||||||| ||| |||||    
T  43913524 attctaatgtgagtaacgttttggatcaacttgaaacttttaaaacgtaaaagaccaatttaaaacttttaaaatataagggaccaacttaaaaactaaa 43913425  T
Q  114 ataaacataaggggtcaaacatgcaattaag 144  Q
    ||||||||||||| |||||||||||||||||    
T  43913424 ataaacataagggatcaaacatgcaattaag 43913394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 46397428 - 46397306
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| | | | ||||| ||||||||||||||| ||    
T  46397428 gtgagtaacgttttggaccaacttaaaacttttaaaacgtaagggaccaacttgaaacttttaaaacatgagggatcaactcgaaacctaaaataaatat 46397329  T
Q  122 aaggggtcaaacatgcaattaag 144  Q
    |  || |||||||||||||||||    
T  46397328 ataggatcaaacatgcaattaag 46397306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 31141801 - 31141677
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||| ||||||||||||| || ||||||||||||||||||||||||| ||||| |||  |||||||||||||  ||||||||||||||||| ||||||||    
T  31141801 gtgattaacgttttggacgaatttgaaacttttaaaacataagggactaacttaaaaaatttaaaacataaatgaccaacttgaaacctaagataaacat 31141702  T
Q  122 aaggggtcaaacatgcaattaagcc 146  Q
    | |||  ||||||||||||||||||    
T  31141701 acgggaccaaacatgcaattaagcc 31141677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 48845834 - 48845710
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    ||||||||| |||||||||||||| ||| ||||||||| |||||||||||||||||| ||||||||||||| |  |||||||  || |||||||||||||    
T  48845834 gtgagtaacattttggaccaacttaaaatttttaaaacgtaagggaccaacttgaaacttttaaaacataaggggccaacttataaactaaaataaacat 48845735  T
Q  122 aaggggtcaaacatgcaattaagcc 146  Q
    ||| | |||||||||||||||||||    
T  48845734 aagagatcaaacatgcaattaagcc 48845710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 36752991 - 36752860
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||| |||||||||||||||||||||||| |||||||||  ||||||||||||||||| ||||||||||| ||| ||||| || |||  ||    
T  36752991 ttattccaacgtgggtaacgttttggaccaacttgaaatttttaaaacgcaagggaccaacttgaaacttttaaaacatgaaggaccaatttaaaaatta 36752892  T
Q  112 aaataaacataaggggtcaaacatgcaattaa 143  Q
    ||||||||||||||| ||||||||||| ||||    
T  36752891 aaataaacataagggatcaaacatgcatttaa 36752860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 20269145 - 20269276
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||| ||| |||||||| |||||||||||||||||||| |||||||| ||||||| | |||| |||||||||||||||||   |||||||| |||| ||    
T  20269145 ttattataatgtgagtaatgttttggaccaacttgaaacctttaaaacgtaagggaacgactttaaatttttaaaacataagagaccaacttaaaacgta 20269244  T
Q  112 aaataaacataaggggtcaaacatgcaattaa 143  Q
    ||||||||||| | | ||||||||||||||||    
T  20269245 aaataaacatacgagatcaaacatgcaattaa 20269276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 146
Target Start/End: Complemental strand, 37724560 - 37724437
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacata 122  Q
    |||||||||||||||||||| |||||| ||||||||  |||||||||||||||||| ||||||| ||| ||| ||||| || ||| ||||||||||||||    
T  37724560 tgagtaacgttttggaccaatttgaaaattttaaaatgtaagggaccaacttgaaacttttaaatcatgaaggaccaatttaaaaactaaaataaacata 37724461  T
Q  123 aggggtcaaacatgcaattaagcc 146  Q
    || | ||| |||||||||||||||    
T  37724460 agagatcatacatgcaattaagcc 37724437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 18414854 - 18414740
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||||||||||||||| |||||||||||| ||||||||  |||||||||||||||||| ||||||||||||| | |||||||| |||  ||    
T  18414854 ttattccaacgtgagtaacgttttgaaccaacttgaaatttttaaaatgtaagggaccaacttgaaacttttaaaacataagggaccaacttaaaaatta 18414755  T
Q  112 aaataaacataaggg 126  Q
    |||||||||||||||    
T  18414754 aaataaacataaggg 18414740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 141
Target Start/End: Complemental strand, 12292992 - 12292892
Alignment:
Q  41 aacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaat 140  Q
    ||||| ||| ||||||||||||||| |||||||||||| |||||||||| || | |||||||| |||||||||||||||||||||| | |||||||||||    
T  12292992 aacttaaaatttttaaaacataaggtaccaacttgaaacttttaaaacaaaagggaccaactttaaacctaaaataaacataagggattaaacatgcaat 12292893  T
Q  141 t 141  Q
    |    
T  12292892 t 12292892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 2516470 - 2516604
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||||||||| |||||||||||| ||||||  ||||| | ||||||||||| |||||| ||||||||||||   |||||  || |||||||    
T  2516470 ttattccaacgtgagtaacattttggaccaacatgaaaccattaaatcgtaagggaccaatttgaaacttttaaaacatatgaaaccatattaaaaccta 2516569  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
     |||||| ||||||| |||||||||||||||||||    
T  2516570 gaataaaaataagggatcaaacatgcaattaagcc 2516604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 54702270 - 54702384
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataa-agaaccaacttgaaacct 110  Q
    ||||||||| ||||||||| ||||| | |||||| ||||| |||||||||||||||||||||| ||| |||||||||| ||  |||||||||| ||||||    
T  54702270 ttattctaatgtgagtaacattttgaatcaacttaaaactgttaaaacataagggaccaacttaaaacttttaaaacagaagggaaccaacttaaaacct 54702369  T
Q  111 aaaataaacataagg 125  Q
    ||||||| |||||||    
T  54702370 aaaataatcataagg 54702384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 20870959 - 20870864
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaac 108  Q
    |||||| || |||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||| ||||||||| | ||| |||||||||||||    
T  20870959 ttattccaatgtgagtaacgttttggacaaacttgaaacttttaaaacgtaagggaccaacttaaaacttttaaaacgt-aaggaccaacttgaaac 20870864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 146
Target Start/End: Original strand, 48658323 - 48658447
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||| ||||||||| ||||||||| ||||||||||||  |||||||||||||| ||| |||||||| || ||  ||||| || ||| ||||||||||||     
T  48658323 gtgactaacgtttttgaccaacttaaaacttttaaaatctaagggaccaacttaaaacttttaaaatatgaatgaccaatttaaaaactaaaataaacaa 48658422  T
Q  122 aaggggtcaaacatgcaattaagcc 146  Q
    ||||  |||||||||||||||||||    
T  48658423 aaggaatcaaacatgcaattaagcc 48658447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 146
Target Start/End: Original strand, 12293189 - 12293312
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacata 122  Q
    ||||||| ||||||||||||| |||||||||||||| |||  |||||||||| |||| ||||||||||||   |||||| | |||  ||||||||| |||    
T  12293189 tgagtaatgttttggaccaacatgaaacttttaaaatatataggaccaacttaaaatgtttaaaacataagtgaccaacctaaaatttaaaataaatata 12293288  T
Q  123 aggggtcaaacatgcaattaagcc 146  Q
    |||||  |||||||||||||||||    
T  12293289 aggggctaaacatgcaattaagcc 12293312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 52485461 - 52485343
Alignment:
Q  25 agtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataag 124  Q
    ||||| ||||||||| ||| ||||||||| ||||| ||| | |||||||| ||| ||||||||||||| | | |||||| ||| |||||||||||||||     
T  52485461 agtaatgttttggactaacatgaaactttgaaaacgtaaagaaccaacttaaaacttttaaaacataagggatcaacttaaaaactaaaataaacataat 52485362  T
Q  125 gggtcaaacatgcaattaa 143  Q
    || ||||||||||||||||    
T  52485361 ggatcaaacatgcaattaa 52485343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 52485622 - 52485755
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaactt-gaaacct 110  Q
    ||||||||| ||||||||  ||||||||| |||||||||||||||||  |||| |||| |||| ||| |||||||| |||| | ||||||||  ||| ||    
T  52485622 ttattctaacgtgagtaatattttggaccgacttgaaacttttaaaatgtaagagacccacttaaaacttttaaaatataagggaccaacttaaaaaact 52485721  T
Q  111 aaaataaacataaggggtcaaacatgcaattaag 144  Q
    |||||||||||||  | |||||||||||||||||    
T  52485722 aaaataaacataaaagatcaaacatgcaattaag 52485755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 16399206 - 16399308
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||||||||||||| ||||||| | |||| |||||||| |||  ||||||||| ||| ||||||||||||||| ||||| || ||| |||||||||||||    
T  16399206 gtgagtaacgtttttgaccaacataaaacctttaaaacgtaaacgaccaacttaaaaattttaaaacataaaggaccaatttaaaatctaaaataaacat 16399305  T
Q  122 aag 124  Q
    |||    
T  16399306 aag 16399308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 2515821 - 2515740
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaa 93  Q
    ||||||||| ||||||||||||||| |||||||||||| |  |||||||||| |||||| ||||||| ||||||||||||||    
T  2515821 ttattctaatgtgagtaacgttttgaaccaacttgaaattggtaaaacataaaggaccagcttgaaacttttaaaacataaa 2515740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 146
Target Start/End: Original strand, 45170849 - 45170930
Alignment:
Q  65 ggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||||| ||| ||||||||||| ||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||    
T  45170849 ggaccaacttaaaacttttaaaacatgaaggaccaatttaaaaactaaaataaacataagggatcaaacatgcaattaagcc 45170930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 5665779 - 5665857
Alignment:
Q  67 accaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagc 145  Q
    ||||| |||||||| ||||||||||| | || |||||||||||||||||||||||||| | ||| ||||||||||||||    
T  5665779 accaagttgaaattgttaaaacataagggacaaacttgaaacctaaaataaacataagagatcagacatgcaattaagc 5665857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 37724705 - 37724767
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaactt 74  Q
    |||||| || |||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  37724705 ttattccaacgtgagtaacgttttggaccaacttgaaacttttaaaacctaagggatcaactt 37724767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 45170758 - 45170696
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaactt 74  Q
    |||||| || ||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  45170758 ttattccaacgtgagtaacattttggaccaacttgaaacttttaaaacctaagggaccaactt 45170696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 20870906 - 20870799
Alignment:
Q  36 ggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacat 135  Q
    |||||||||| ||||||||||||| ||||| |||||||||||| ||||||||  ||| | || |||||| || |||||||||||||||||  || |||||    
T  20870906 ggaccaacttaaaacttttaaaacgtaagg-accaacttgaaacttttaaaatgtaagggacgaacttggaaactaaaataaacataaggaatc-aacat 20870809  T
Q  136 gcaattaagc 145  Q
    ||||||||||    
T  20870808 gcaattaagc 20870799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 145
Target Start/End: Original strand, 37724729 - 37724809
Alignment:
Q  65 ggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagc 145  Q
    |||||||||||||| ||||||||| ||| | | |||||| ||| |||||||||||||||| | ||||||||||||||||||    
T  37724729 ggaccaacttgaaacttttaaaacctaagggatcaacttaaaaactaaaataaacataagagatcaaacatgcaattaagc 37724809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 20871138 - 20871216
Alignment:
Q  67 accaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||||||| ||||||||||||||| |||||| | ||| |||||||||||||||||| | |||| ||||||||||||    
T  20871138 accaacttgaaacttttaaaacataaaggaccaac-taaaaactaaaataaacataagggatgaaacgtgcaattaagcc 20871216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 20268988 - 20268930
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaactttt-aaaacataagggaccaacttgaaat 79  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  20268988 gtgagtaacgttttgaaccaacttgaaacttttaaaaacataagggaccaacttaaaat 20268930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 31143734 - 31143813
Alignment:
Q  67 accaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||| ||| ||||||||||||| | | |||| ||||||||||||||||||  ||||  ||||||||||||||||||    
T  31143734 accaacttaaaacttttaaaacataagggatcaacatgaaacctaaaataaacaccagggaccaaacatgcaattaagcc 31143813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 40426154 - 40426092
Alignment:
Q  15 ttctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaa 78  Q
    |||||| |||||||| ||||||||||||||| |||||||||||||||||  |||||||||||||    
T  40426154 ttctaaagtgagtaatgttttggaccaacttaaaacttttaaaacataa-agaccaacttgaaa 40426092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 45170825 - 45170884
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaa 71  Q
    |||||| || |||||||||||||||||||||||| ||||||||||||||| | |||||||    
T  45170825 ttattccaacgtgagtaacgttttggaccaacttaaaacttttaaaacatgaaggaccaa 45170884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 20871112 - 20871173
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaact 73  Q
    |||||| || ||||| ||||||||  |||||||||||||||||||||||||| |||||||||    
T  20871112 ttattccaacgtgagcaacgttttaaaccaacttgaaacttttaaaacataaaggaccaact 20871173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 5665763 - 5665819
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaa 78  Q
    ||||||||||||||| ||||| |||||| | |||||||||||||||| |||||||||    
T  5665763 gtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttgaaa 5665819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 141
Target Start/End: Original strand, 38916952 - 38917035
Alignment:
Q  58 acataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaatt 141  Q
    |||||||||||||| |||||| |||| |||| || |  ||||||| ||||||||||||| |||||||||  ||||| |||||||    
T  38916952 acataagggaccaatttgaaactttttaaacttagatgaccaactcgaaacctaaaatatacataagggaccaaacgtgcaatt 38917035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 12714868 - 12714770
Alignment:
Q  26 gtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataag 124  Q
    ||||||||||  |||||||| |||||||||||||||||| || ||| || ||| | ||||| ||||||  |||||||| |||  | |||||||||||||    
T  12714868 gtaacgttttaaaccaacttaaaacttttaaaacataagagatcaatttaaaactcttaaaccataaatgaccaacttaaaaattcaaataaacataag 12714770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 24672030 - 24671952
Alignment:
Q  66 gaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaag 144  Q
    ||||||||||||| ||||||||||||||  | |||||| ||| ||||||||||| ||||||  |||| || ||||||||    
T  24672030 gaccaacttgaaacttttaaaacataaatgatcaacttaaaatctaaaataaacttaagggaccaaatatacaattaag 24671952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 4592452 - 4592399
Alignment:
Q  70 aacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataa 123  Q
    ||||||||| ||||||||||||| | |||||||| ||||||||| |||||||||    
T  4592452 aacttgaaacttttaaaacataagggaccaacttaaaacctaaattaaacataa 4592399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 4592452 - 4592419
Alignment:
Q  41 aacttgaaacttttaaaacataagggaccaactt 74  Q
    ||||||||||||||||||||||||||||||||||    
T  4592452 aacttgaaacttttaaaacataagggaccaactt 4592419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 16399045 - 16398941
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||||||| |||| |||| ||||| ||||| || ||| | |||||||||||   |||||||| ||| |||||||||| || | |||||||| |||||||    
T  16399045 ttattctaacgtgaataacattttg-accaatttaaaagtgttaaaacataataaaccaacttaaaacttttaaaacaaaagggaccaacttaaaaccta 16398947  T
Q  112 aaataa 117  Q
    ||||||    
T  16398946 aaataa 16398941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 21376161 - 21376104
Alignment:
Q  32 ttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaaca 89  Q
    ||||| ||||||||||||||||||||| |||||||| |||||| ||| |||| |||||    
T  21376161 ttttgaaccaacttgaaacttttaaaatataagggatcaacttaaaaattttgaaaca 21376104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 5688728 - 5688808
Alignment:
Q  66 gaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||| |||||||||||||||||   | |||||| |||| |||| ||||||| ||||  |||||||| |||||||||    
T  5688728 gaccaacttaaaatttttaaaacataagagagcaacttaaaacttaaagtaaacattagggaccaaacatgaaattaagcc 5688808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 12292966 - 12292930
Alignment:
Q  38 accaacttgaaacttttaaaacataagggaccaactt 74  Q
    ||||||||||||||||||||||| |||||||||||||    
T  12292966 accaacttgaaacttttaaaacaaaagggaccaactt 12292930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 40426133 - 40426087
Alignment:
Q  65 ggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaa 112  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  40426133 ggaccaacttaaaacttttaaaacataaag-accaacttgaaacctaa 40426087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 45170734 - 45170679
Alignment:
Q  65 ggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaaca 120  Q
    |||||||||||||| ||||||||| ||| | |||||||| ||| ||||||||||||    
T  45170734 ggaccaacttgaaacttttaaaacctaagggaccaacttaaaaactaaaataaaca 45170679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 20268972 - 20268894
Alignment:
Q  67 accaacttgaaatttttaaaa-cataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaag 144  Q
    |||||||||||| |||||||| ||||| | |||||||| ||| |||||||||||||| |    ||||||||||||||||    
T  20268972 accaacttgaaacttttaaaaacataagggaccaacttaaaatctaaaataaacatacgaaaccaaacatgcaattaag 20268894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 24672045 - 24672004
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataa 63  Q
    |||| |||| |||| |||||||||||||||||||||||||||    
T  24672045 gtgaataacatttttgaccaacttgaaacttttaaaacataa 24672004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 36752993 - 36753034
Alignment:
Q  102 ttgaaacctaaaataaacataaggggtcaaacatgcaattaa 143  Q
    |||||| ||||||||||||||| || ||||||||||||||||    
T  36752993 ttgaaaactaaaataaacataaaggatcaaacatgcaattaa 36753034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 31143734 - 31143774
Alignment:
Q  38 accaacttgaaacttttaaaacataagggaccaacttgaaa 78  Q
    |||||||| ||||||||||||||||||||| |||| |||||    
T  31143734 accaacttaaaacttttaaaacataagggatcaacatgaaa 31143774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 43913674 - 43913754
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataa 92  Q
    ||||||||| |||| |||  |||||||||||||||||| ||| ||||| ||| |||| | ||| ||| || ||||||||||    
T  43913674 ttattctaacgtgaataatattttggaccaacttgaaattttgaaaacgtaaaggactagcttaaaacttctaaaacataa 43913754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0548 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 3312 - 3446
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| | |||||||||||| |||    
T  3312 ttattccaaagtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaacttgaaacttttaaaacataagggaccaacttgaaaacta 3411  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||| |||||||||||||||||||    
T  3412 aaataaacataagggatcaaacatgcaattaagcc 3446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 9e-48; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 48171717 - 48171849
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||||||||||||||| |||||||||||||||||||||||||||||| || ||||||| ||||||||||||||| ||||||||||||||||    
T  48171717 ttattcaaatgtgagtaacgttttgaaccaacttgaaacttttaaaacataagggaacagcttgaaacttttaaaacataaaggaccaacttgaaaccta 48171816  T
Q  112 aaataaacataaggggtcaaacatgcaattaag 144  Q
    |||||||||||||||  ||||||||||||||||    
T  48171817 aaataaacataagggaccaaacatgcaattaag 48171849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 42604762 - 42604628
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||| |||||||| |||||| |||||||||||| |||    
T  42604762 ttattccaacgtgagtaacgttttagaccaacttgaaacttttaaaactaaagggaccaacttgaaacttttaaaatataaagtaccaacttgaaaacta 42604663  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||| |||||||||||||||||||    
T  42604662 aaataaacataagggatcaaacatgcaattaagcc 42604628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 31872880 - 31873013
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| | | |||||||||||| |||    
T  31872880 ttattccaacgtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaacttgaaacttttaaaacat-agggaccaacttgaaaacta 31872978  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||| ||||| |||||||||||||    
T  31872979 aaataaacataagggatcaaatatgcaattaagcc 31873013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 143104 - 143226
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||| |||| || |||||||| |||||||||||||||||    
T  143104 gtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaacttaaaacttttaaagcatataggaccaacttaaaacctaaaataaacat 143203  T
Q  122 aaggggtcaaacatgcaattaag 144  Q
    ||||| |||||||| ||||||||    
T  143204 aagggatcaaacatacaattaag 143226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 8718477 - 8718611
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||| |||||||| |||| | |||||||| |||||||    
T  8718477 ttattccaatgtgagtaacgttttgaaccaacttgaaaattttaaaacataagggacaaacttgaaacttttaaaaaataagggaccaacttaaaaccta 8718576  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||| ||| |||||||||||||||||||    
T  8718577 aaataaacatatgggatcaaacatgcaattaagcc 8718611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 19987466 - 19987332
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||| | |||||| ||| |||    
T  19987466 ttattccaatgtgagtaacgttttggatcaacttgaaacttttaaaacttaagggaccaacttaaaacttttaaaacataaaggaacaacttaaaaacta 19987367  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||| ||| |||||||||||||||||||    
T  19987366 aaataaacatatgggatcaaacatgcaattaagcc 19987332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 33460027 - 33459893
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||| ||| ||| ||||| |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||| | || ||||||||| |||    
T  33460027 ttattataacgtgcgtaacattttggaccaacttgaaacttttaaaacgtaaaggaccaacttgaaacttttaaaacataagggactaacttgaaaacta 33459928  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||| |||| ||||||||||||||    
T  33459927 aaataaacataagggatcaagcatgcaattaagcc 33459893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 42604910 - 42605044
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||| ||||||||| ||| |  ||||||||||| |||    
T  42604910 ttattcaaatgtgagtaacgtttttgaccaacatgaaactttaaaaacgtaagggaccaacttgaaacttttaaaacctaagggtccaacttgaaaacta 42605009  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||| |||||||||||||||||||    
T  42605010 aaataaacataagggatcaaacatgcaattaagcc 42605044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 135
Target Start/End: Original strand, 34518235 - 34518358
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||| |||||||| |||||| |||||||| ||| |||    
T  34518235 ttattctaacgtgagtaacgttttggaccaacttgaaatttttaaaacgtaagggaccaatttaaaacttttaaaatataaaggaccaacttaaaaacta 34518334  T
Q  112 aaataaacataaggggtcaaacat 135  Q
    ||||||||||||||| ||||||||    
T  34518335 aaataaacataagggatcaaacat 34518358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 35795597 - 35795729
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||||| | | |||||||| ||| |||    
T  35795597 ttattcttatgtgagtaacgttttgaaccaacttgaaacttttaaaacataagggaccaatttaaaacttttaaaacatcagggaccaacttaaaatcta 35795696  T
Q  112 aaataaacataaggggtcaaacatgcaattaag 144  Q
    |||||||||||| ||  ||||||||||||||||    
T  35795697 aaataaacataaaggaccaaacatgcaattaag 35795729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 35795445 - 35795311
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||| |||||||||||||||| |||||||| |||||||| ||||||||||||| |||| |||||||||  || | |||||||||||| |||    
T  35795445 ttattcaaacgtgggtaacgttttggaccaccttgaaacctttaaaacgtaagggaccaactcgaaacttttaaaactcaagggaccaacttgaaatcta 35795346  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||| | |||||||||||||||||||    
T  35795345 aaataaacataagagatcaaacatgcaattaagcc 35795311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 37245769 - 37245637
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||||||||||||| ||||||||||||  ||||||| |||||||||| |||||||| ||||   |||||||| ||| |||    
T  37245769 ttattccaacgtgagtaacgttttggaccaacttaaaacttttaaaatgtaagggatcaacttgaaacttttaaaatataagagaccaacttaaaaacta 37245670  T
Q  112 aaataaacataaggggtcaaacatgcaattaag 144  Q
    ||||||||||||||| ||||| |||||||||||    
T  37245669 aaataaacataagggatcaaatatgcaattaag 37245637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 33460171 - 33460297
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||||||||||     |||||||||||| ||||||| |||||||||| ||||||||||||| | |||||||||||| |||    
T  33460171 ttattccaacgtgagtaacgttttggaccaa-----aacttttaaaacgtaagggatcaacttgaaacttttaaaacataagggaccaacttgaaaacta 33460265  T
Q  112 aaataaacataaggggtcaaacatgcaattaa 143  Q
    ||||||||||||| | ||||||||||||||||    
T  33460266 aaataaacataagagatcaaacatgcaattaa 33460297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 34518086 - 34517965
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    ||||||||||||||| |||||||| ||||||||||||| || |||||| | |||||| | ||||||||||| | |||||||| ||| |||||||||||||    
T  34518086 gtgagtaacgttttgaaccaacttaaaacttttaaaacgtaggggaccgagttgaaactgttaaaacataatggaccaacttaaaaactaaaataaacat 34517987  T
Q  122 aaggggtcaaacatgcaattaa 143  Q
    ||||| ||||||||||||||||    
T  34517986 aagggatcaaacatgcaattaa 34517965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 142930 - 142811
Alignment:
Q  25 agtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataag 124  Q
    |||||||||||  || || ||||||||||||||||||||||||||||||||||| |||||||||| || | |||||||| |||||||||||| |||||||    
T  142930 agtaacgttttaaacaaatttgaaacttttaaaacataagggaccaacttgaaaattttaaaacacaagggaccaacttaaaacctaaaatacacataag 142831  T
Q  125 gggtcaaacatgcaattaag 144  Q
    ||   |||||||||||||||    
T  142830 ggacaaaacatgcaattaag 142811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 3073110 - 3072979
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||| |||| |||| ||||||||||||||||||||||| |||| ||||||||| ||| |||||||||| || | |||||||| ||| |||    
T  3073110 ttattccaacgtgaataacattttagaccaacttgaaacttttaaaacgtaagagaccaacttaaaacttttaaaacacaagggaccaacttaaaatcta 3073011  T
Q  112 aaataaacataaggggtcaaacatgcaattaa 143  Q
    |||||||||||| || ||||||||||||||||    
T  3073010 aaataaacataaaggatcaaacatgcaattaa 3072979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 22792558 - 22792689
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||||||| |||||||||| ||| |||| |||||||||||||| ||| ||||||||| ||| | |||||||| |||||||    
T  22792558 ttattccaatgtgagtaacgttttggactaacttgaaacctttcaaacgtaagggaccaacttaaaacttttaaaacttaagggaccaacttaaaaccta 22792657  T
Q  112 aaataaacataaggggtcaaacatgcaattaa 143  Q
    ||||||||||| |||  ||||||| |||||||    
T  22792658 aaataaacatatgggaccaaacatacaattaa 22792689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 3075201 - 3075326
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||        ||||||||| ||     
T  3075201 ttattccaatgtgagtaacgttttggacaaacttgaaacttttaaaacgtaatggaccaacttgaaacttttaaaacat--------aacttgaaaact- 3075291  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||| |||||||||||||||||||    
T  3075292 aaataaacataagggatcaaacatgcaattaagcc 3075326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 48171531 - 48171442
Alignment:
Q  55 aaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaag 144  Q
    ||||| |||||||||||||||||| ||||||||||||| | |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  48171531 aaaacgtaagggaccaacttgaaacttttaaaacataagggaccaacctgaaacctaaaataaacataagggatcaaacatgcaattaag 48171442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 14420060 - 14420192
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||||||||||||||||||||||||||||  ||||||||||||  ||  ||||||||| |||||||||||||   || || || |||||||    
T  14420060 ttattccaacgtgagtaacgttttggaccaacttgaaatctttaaaacataattgattaacttgaaacttttaaaacataatagactaatttaaaaccta 14420159  T
Q  112 aaataaacataaggggtcaaacatgcaattaag 144  Q
    ||||||||||||||  |||||||||||||||||    
T  14420160 aaataaacataaggaatcaaacatgcaattaag 14420192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 22792411 - 22792290
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacata 122  Q
    |||||||||||||| | |||| ||||||||||||||||||| |||||||||| ||| |||||||||| || | |||||||| |||| |||||||||||||    
T  22792411 tgagtaacgttttgaatcaacatgaaacttttaaaacataacggaccaacttaaaacttttaaaacaaaagggaccaacttaaaacttaaaataaacata 22792312  T
Q  123 aggggtcaaacatgcaattaag 144  Q
     |||  |||| |||||||||||    
T  22792311 tgggaccaaatatgcaattaag 22792290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 18519439 - 18519315
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    ||||||||||||||  | |||||||||| ||||||||| |||||||||||||| |||  |||||||||||| | |||||||| ||| |||||||||||||    
T  18519439 gtgagtaacgttttatatcaacttgaaatttttaaaacgtaagggaccaacttaaaacatttaaaacataagggaccaacttaaaaactaaaataaacat 18519340  T
Q  122 aaggggtcaaacatgcaattaagcc 146  Q
    ||||  |  ||||||||||||||||    
T  18519339 aaggtattgaacatgcaattaagcc 18519315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 19987627 - 19987746
Alignment:
Q  25 agtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataag 124  Q
    |||||||||||||| |||||| ||||||||||||  | |||||||||  | ||| |||||||||| || |||||||||||||| |||||||||||||||     
T  19987627 agtaacgttttggatcaacttaaaacttttaaaatgtgagggaccaaaataaaacttttaaaacacaaggaaccaacttgaaaactaaaataaacataaa 19987726  T
Q  125 gggtcaaacatgcaattaag 144  Q
    || | |||||||||||||||    
T  19987727 ggattaaacatgcaattaag 19987746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 143
Target Start/End: Complemental strand, 31872787 - 31872709
Alignment:
Q  65 ggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaa 143  Q
    |||||||||||||| ||||||||| ||| | |||||||| ||| |||||||||||||||||| ||||||||||||||||    
T  31872787 ggaccaacttgaaacttttaaaacgtaagggaccaactttaaaactaaaataaacataagggatcaaacatgcaattaa 31872709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 31872801 - 31872749
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaactt 74  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31872801 gtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaactt 31872749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 13189273 - 13189177
Alignment:
Q  24 gagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaaca 120  Q
    ||||||||||||| ||||||| || |||||||||| |||| | |||||||| ||| |||||||| |||| | |||||||  ||||||||||||||||    
T  13189273 gagtaacgttttgaaccaactcgatacttttaaaatataaagcaccaacttaaaacttttaaaatataagggaccaactgaaaacctaaaataaaca 13189177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 143
Target Start/End: Original strand, 36783398 - 36783489
Alignment:
Q  51 ttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaa 143  Q
    ||||||||||||| || | ||||||||||||||||||||||||  |||||||| ||| ||||||| |||||||| |  ||||||| |||||||    
T  36783398 ttttaaaacataaaggtc-aacttgaaatttttaaaacataaaagaccaacttaaaatctaaaatgaacataagagaccaaacatacaattaa 36783489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 146
Target Start/End: Complemental strand, 25622685 - 25622606
Alignment:
Q  67 accaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||||||| ||| |||||||||   || || |||||||||||||||||||||||||   |||||||||||||||||    
T  25622685 accaacttgaaactttcaaaacataagagactaatttgaaacctaaaataaacataagggactaaacatgcaattaagcc 25622606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 30971926 - 30971835
Alignment:
Q  41 aacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaa 132  Q
    ||||| ||||||||||||  ||||| |  ||||| ||| ||||||||||||||||| |||||| ||| ||||||||||| |||||| |||||    
T  30971926 aacttaaaacttttaaaatgtaaggtaataacttaaaacttttaaaacataaagaaacaacttaaaaactaaaataaacctaagggatcaaa 30971835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 18519599 - 18519665
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaa 78  Q
    |||||| || |||||||||||||| || |||||||||||||||||||| || | |||||||||||||    
T  18519599 ttattccaacgtgagtaacgttttagatcaacttgaaacttttaaaacgtatgagaccaacttgaaa 18519665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 18519627 - 18519701
Alignment:
Q  69 caacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaa 143  Q
    |||||||||| ||||||||| ||    |||||||||||| |||||||||||||||| | ||||||||||||||||    
T  18519627 caacttgaaacttttaaaacgtatgagaccaacttgaaaactaaaataaacataagagatcaaacatgcaattaa 18519701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 25622711 - 25622645
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaa 78  Q
    |||||| || ||||||||||||||| |||||||||||||||| |||||||||| ||| || ||||||    
T  25622711 ttattccaatgtgagtaacgttttgaaccaacttgaaactttcaaaacataagagactaatttgaaa 25622645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 37245933 - 37245983
Alignment:
Q  96 accaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||| ||| |||||||||||||||||| |||||||||||||||||||    
T  37245933 accaacttaaaaactaaaataaacataagggatcaaacatgcaattaagcc 37245983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 48171521 - 48171479
Alignment:
Q  36 ggaccaacttgaaacttttaaaacataagggaccaacttgaaa 78  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  48171521 ggaccaacttgaaacttttaaaacataagggaccaacctgaaa 48171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 6043557 - 6043446
Alignment:
Q  32 ttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaa 131  Q
    ||||||| |||||| ||||  |||||| |||| |||| |||||||||  ||||||| |||| | |   |||| |||||||||||||| |||||||  |||    
T  6043557 ttttggatcaacttaaaacaattaaaatataatggacaaacttgaaacatttaaaatataatgga---acttaaaacctaaaataaatataagggaccaa 6043461  T
Q  132 acatgcaattaagcc 146  Q
    |||||||||||||||    
T  6043460 acatgcaattaagcc 6043446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 14419884 - 14419839
Alignment:
Q  80 ttttaaaacataaagaaccaacttgaaacctaaaataaacataagg 125  Q
    ||||||||||||| | |||||||| |||||||||||||||||||||    
T  14419884 ttttaaaacataagggaccaacttaaaacctaaaataaacataagg 14419839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 8718455 - 8718405
Alignment:
Q  96 accaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||| |||||||||||||||| ||| |  ||||||||||||||||||    
T  8718455 accaacttaaaacctaaaataaacacaagagaccaaacatgcaattaagcc 8718405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 17343020 - 17342886
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||| |||  ||||||||||||||||||||||||||| | ||||||||||||||||    
T  17343020 ttattttaaggtgagtaacgttttggaccaatttgaaacttttaaaacgtaaaagaccaacttgaaatttttaaaacataagggaccaacttgaaaccta 17342921  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||| ||| | |||||||||||||||||    
T  17342920 aaataaacatacgggattaaacatgcaattaagcc 17342886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 22793433 - 22793299
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| ||||||| ||||||| ||||  || || |||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||    
T  22793433 ttattccaaggtgactaacgttgtggatgaaattaaaacttttaaaacataagggaccaacttgaaacttttaaaacataagggaccaacttgaaaccta 22793334  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||||||||||| |||| || ||||||||||    
T  22793333 aaataaacataaggggccaaatatccaattaagcc 22793299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 10567585 - 10567471
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||| | ||||| |||||| |||||||||||||    
T  10567585 gtgagtaacgttttgaaccaacttgaaacttttaaaacgtaagggaccaacttgaaacttttaaaacgtaagggaccaatttgaaaactaaaataaacat 10567486  T
Q  122 aaggggtcaaacatg 136  Q
    ||||| |||||||||    
T  10567485 aagggatcaaacatg 10567471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 32629185 - 32629064
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||||||||||||||||| |||||||||| |||||||  |||||||||||||| |||||||||||||||||||  | ||||| |||||||||||||||||    
T  32629185 gtgagtaacgttttggactaacttgaaacctttaaaatgtaagggaccaacttaaaatttttaaaacataaaggtctaacttaaaacctaaaataaacat 32629086  T
Q  122 aaggggtcaaacatgcaattaa 143  Q
    ||||| ||||||||| ||||||    
T  32629085 aagggatcaaacatgtaattaa 32629064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 10567742 - 10567875
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||| | ||| ||||||  ||    
T  10567742 ttattccaacgtgagtaatgttttggaccaacttgaaacttttaaaacgtaagggaccaacttgaaactcttaaaacatgaag-atcaatttgaaaatta 10567840  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||| ||||| |||||||||||||    
T  10567841 aaataaacataagggatcaaatatgcaattaagcc 10567875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 34829850 - 34829968
Alignment:
Q  26 gtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataagg 125  Q
    ||||||||||| ||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||   |||||||| ||||||||||||||||||||     
T  34829850 gtaacgttttgaaccaacttgaaacctttaaaacgtaagggaccaacatgaaacttttaaaacataagagaccaacttaaaacctaaaataaacataaga 34829949  T
Q  126 ggtcaaacatgcaattaag 144  Q
    | |||||||||||||||||    
T  34829950 gatcaaacatgcaattaag 34829968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 28613463 - 28613578
Alignment:
Q  28 aacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataagggg 127  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||| ||||| || |||  |||||||||||||||||     
T  28613463 aacgtttttgaccaacttgaaacttttaaaacgtaagggaccaacttgaaatttttaaaacaagaaggaccaatttaaaaattaaaataaacataaggga 28613562  T
Q  128 tcaaacatgcaattaa 143  Q
    |||||||| |||||||    
T  28613563 tcaaacatacaattaa 28613578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 6611934 - 6612052
Alignment:
Q  28 aacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataagggg 127  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||| || | | |||||| ||| ||||||||||||||||       
T  6611934 aacgttttggaccaacttgaaacatttaaaacgtaagggaccaacttgaaacttttaaaacacaagggatcaacttaaaatctaaaataaacataagaca 6612033  T
Q  128 tcaaacatgcaattaagcc 146  Q
    |||||||||||||||||||    
T  6612034 tcaaacatgcaattaagcc 6612052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 6611727 - 6611636
Alignment:
Q  28 aacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaac 119  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| | |||||| |||||||||||||||||    
T  6611727 aacgttttgaaccaacttgaaacttttaaaacatgagggaccaacttgaaacttttaaaacataagggaccaacctgaaacctaaaataaac 6611636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 29674956 - 29674857
Alignment:
Q  36 ggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacat 135  Q
    |||||||||||||||||||||||| ||||| |||||||||||| |||||||| |||| | |||||||||||||||||| |||||||||||| ||||||||    
T  29674956 ggaccaacttgaaacttttaaaacgtaaggaaccaacttgaaacttttaaaatataagggaccaacttgaaacctaaattaaacataagggatcaaacat 29674857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 29675009 - 29674913
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaac 108  Q
    |||||| || |||||| | |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||| ||| |||||||||||||||    
T  29675009 ttattccaacgtgagtcatgttttggatcaacttgaaacttttaaaacttaagggaccaacttgaaacttttaaaacgtaaggaaccaacttgaaac 29674913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 6273878 - 6273997
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||||||| | ||||||||||||||| ||||||||||||||   ||||||||||||| |||||||||||||  ||| ||||  ||||||| |||||||||    
T  6273878 gtgagtaatgatttggaccaacttgatacttttaaaacatacatgaccaacttgaaacttttaaaacataagaaactaactgaaaacctagaataaacat 6273977  T
Q  122 aaggggtcaaacatgcaatta 142  Q
    ||| || ||||||||||||||    
T  6273978 aagagg-caaacatgcaatta 6273997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 146
Target Start/End: Original strand, 11122192 - 11122315
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    ||||||||||||| |||| |||||||| | |||||||| ||||  || ||||| ||| ||||||||||||||  ||||||||  ||||||||||||||||    
T  11122192 gtgagtaacgttt-ggacgaacttgaatcctttaaaacgtaagatactaacttcaaacttttaaaacataaatgaccaacttacaacctaaaataaacat 11122290  T
Q  122 aaggggtcaaacatgcaattaagcc 146  Q
    ||||| |||||||| ||||||||||    
T  11122291 aagggatcaaacatacaattaagcc 11122315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 22793601 - 22793679
Alignment:
Q  65 ggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaa 143  Q
    |||| ||||||||| ||||||||| ||| | ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22793601 ggacaaacttgaaacttttaaaacgtaagggaccaacttgaaacctaaaataaacataagggatcaaacatgcaattaa 22793679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 28705819 - 28705902
Alignment:
Q  41 aacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataag 124  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||||||| || | |||||||| |||| |||||||||||||||    
T  28705819 aacttgaaagttttaaaacataagggactaacttgaaagttttaaaacaaaagggaccaacttaaaacttaaaataaacataag 28705902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 32629345 - 32629439
Alignment:
Q  26 gtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaaca 120  Q
    ||||||||||| || ||||||||| |||||||| ||||||||||||||  ||| ||||||||||||||  |||||||| ||||| ||||||||||    
T  32629345 gtaacgttttgaacgaacttgaaatttttaaaatataagggaccaactcaaaacttttaaaacataaaagaccaacttaaaaccaaaaataaaca 32629439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 141
Target Start/End: Complemental strand, 6273696 - 6273620
Alignment:
Q  65 ggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaatt 141  Q
    |||||||||| |||  |||||||||||||||||||||||||||| ||||||||||||||  | | ||||||||||||    
T  6273696 ggaccaacttaaaacgtttaaaacataaagaaccaacttgaaacgtaaaataaacataatagattaaacatgcaatt 6273620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 22793588 - 22793643
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaa 78  Q
    |||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  22793588 tgagtaacattttggacaaacttgaaacttttaaaacgtaagggaccaacttgaaa 22793643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 6273720 - 6273654
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaa 78  Q
    ||||| ||| |||||||||||||||||||||||| |||| |||||||||||| | ||||||||||||    
T  6273720 ttattttaatgtgagtaacgttttggaccaacttaaaacgtttaaaacataaagaaccaacttgaaa 6273654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 17343165 - 17343215
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacata 62  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  17343165 ttattctaaggtgagtaacattttggaccaacttgaaacttttaaagcata 17343215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 143
Target Start/End: Complemental strand, 34829655 - 34829582
Alignment:
Q  70 aacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaa 143  Q
    ||||||||| |||||||||||||  ||||||||| |||| |||||||||||||| || |||||| |||||||||    
T  34829655 aacttgaaacttttaaaacataagtaaccaacttaaaacttaaaataaacataaaggatcaaacctgcaattaa 34829582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 28613287 - 28613236
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaactt 74  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||||    
T  28613287 tgagtaacgttttggaccaacttacaacttttaaaacgtaagggaccaactt 28613236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 13498388 - 13498469
Alignment:
Q  42 acttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataa 123  Q
    ||||||||||||||| ||||||| ||||||| | ||| |||||||||||||   ||| |||| ||||||||||||| |||||    
T  13498388 acttgaaacttttaatacataagagaccaacataaaacttttaaaacataagagaccgacttaaaacctaaaataagcataa 13498469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 28613274 - 28613193
Alignment:
Q  65 ggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||  || ||||||||| ||| | |||||||| ||| |||||||||| ||||||| |||||||||||| ||||||    
T  28613274 ggaccaacttacaacttttaaaacgtaagggaccaacttaaaaactaaaataaatataagggatcaaacatgcaactaagcc 28613193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 6209946 - 6209842
Alignment:
Q  31 gttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtca 130  Q
    |||||||| || ||| ||||||| | |||| ||| ||  ||||||||| ||||||||||||||  || || |||||||||||||||||| ||||||  ||    
T  6209946 gttttggatcatcttaaaactttcacaacaaaagagataaacttgaaacttttaaaacataaatgacaaaattgaaacctaaaataaacgtaagggacca 6209847  T
Q  131 aacat 135  Q
    |||||    
T  6209846 aacat 6209842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 28705769 - 28705856
Alignment:
Q  19 aaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaa 107  Q
    |||||| ||||| ||||| ||| | |||||||||||||||||||| |||  ||||||||| ||||||||||||| | || |||||||||    
T  28705769 aaggtgggtaacattttgaacctatttgaaacttttaaaacataa-ggaataacttgaaagttttaaaacataagggactaacttgaaa 28705856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 11121977 - 11121934
Alignment:
Q  36 ggaccaacttgaaacttttaaaacataagggaccaacttgaaat 79  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  11121977 ggaccaacttgaaacttttaaaatataagggatcaacttgaaat 11121934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 19279286 - 19279392
Alignment:
Q  37 gaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatg 136  Q
    ||||| ||| ||||| |||||||| | ||||| ||||| ||| ||||||||||||||  || ||||| ||| ||||||||||||| | |   ||||||||    
T  19279286 gaccaccttcaaactcttaaaacaaaggggactaacttaaaacttttaaaacataaaatactaacttaaaatctaaaataaacattacgaaccaaacatg 19279385  T
Q  137 caattaa 143  Q
    |||||||    
T  19279386 caattaa 19279392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 7213362 - 7213436
Alignment:
Q  70 aacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||| ||| |||||||||||||| |||||| || ||| ||||||||| |||||||  |||||||||||||||||||    
T  7213362 aacttaaaacttttaaaacataaa-aaccaatttaaaaactaaaataagcataagga-tcaaacatgcaattaagcc 7213436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 6210284 - 6210342
Alignment:
Q  66 gaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataag 124  Q
    ||||||| | ||| ||||||||||||| | |||||||| ||| ||||||||||||||||    
T  6210284 gaccaacataaaacttttaaaacataaggcaccaacttaaaatctaaaataaacataag 6210342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 11122005 - 11121935
Alignment:
Q  38 accaacttgaaacttttaaaacat-aagggaccaacttgaaatttttaaaacataaagaaccaacttgaaa 107  Q
    |||||||||||||||| || |||| || |||||||||||||| |||||||| |||| | | ||||||||||    
T  11122005 accaacttgaaactttaaagacattaaaggaccaacttgaaacttttaaaatataagggatcaacttgaaa 11121935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 34829684 - 34829622
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaactt 74  Q
    |||||| || |||||||| || ||| || ||||||||||||||||||||||||  ||||||||    
T  34829684 ttattccaatgtgagtaatgtattgaactaacttgaaacttttaaaacataagtaaccaactt 34829622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 2594283 - 2594230
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagg 65  Q
    ||||| ||| |||||||||||||||||  ||||| ||||||||||| |||||||    
T  2594283 ttattttaatgtgagtaacgttttggaaaaacttaaaacttttaaaccataagg 2594230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 24394039 - 24394104
Alignment:
Q  25 agtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacat 90  Q
    ||||||||||| |||||| |  |||| ||||||||||||||||  ||||| ||| |||||||||||    
T  24394039 agtaacgttttagaccaattcaaaacctttaaaacataagggagtaacttaaaacttttaaaacat 24394104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 7213336 - 7213384
Alignment:
Q  15 ttctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataa 63  Q
    ||||| |||||||||| |||| ||| ||||| |||||||||||||||||    
T  7213336 ttctacggtgagtaacattttagactaacttaaaacttttaaaacataa 7213384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 29675176 - 29675256
Alignment:
Q  67 accaacttgaaat-ttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||| |||| ||||||||||| |   |||||||| ||||||||||||||||||| |   ||||||| ||||||||||    
T  29675176 accaacttaaaatcttttaaaacatgagagaccaacttaaaacctaaaataaacataaagcaccaaacatacaattaagcc 29675256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 63004 - 63138
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||||||||||| ||||||||||||||  |||||||||||||||||| ||||||||||| ||| ||||| || ||| |||    
T  63004 ttattccaaagtgagtaacgttttggaccaacctgaaacttttaaaatgtaagggaccaacttgaaacttttaaaacatgaaggaccaatttaaaaacta 63103  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||| |||||||||||||||||||    
T  63104 aaataaacataagggatcaaacatgcaattaagcc 63138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 62858 - 62724
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||| ||||||||||||    ||||||||||||  |     
T  62858 ttattccaacgtgagtaacgttttggaccaacttaaaacttttaaaacgtaagggattaacttgaaacttttaaaacatacgagaccaacttgaaaattg 62759  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||| ||||||| |||| ||||||||||||||    
T  62758 aaataaatataagggatcaagcatgcaattaagcc 62724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 44995340 - 44995473
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| || ||| |||||||| ||| |||    
T  44995340 ttattccaacgtgagtaacgttttggaccaacttgatacttttaaaacgtaagggaccaacttgaaacttttaaaatatgaagtaccaacttaaaaacta 44995439  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||| |||||||||||| |||||||||||||    
T  44995440 aaataaacgtaaggggtcaaa-atgcaattaagcc 44995473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 29526874 - 29527007
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||| | |||||||| |||  ||    
T  29526874 ttattccaacgtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaacttaaaacttttaaaacataatggaccaacttaaaaatta 29526973  T
Q  112 aaataaacataaggggtcaaacatgcaattaagc 145  Q
    ||||||||||||||| | |||||| |||||||||    
T  29526974 aaataaacataagggattaaacatacaattaagc 29527007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 26845464 - 26845596
Alignment:
Q  15 ttctaaggtgagtaacgttttggaccaacttgaaacttttaaaa-cataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaa 113  Q
    |||||| ||||||||||||||| |||||| ||||||| |||||| ||||| |||||||||||||| ||||||||||||| | |||||||| |||||||||    
T  26845464 ttctaatgtgagtaacgttttgaaccaacatgaaactgttaaaaacataaaggaccaacttgaaacttttaaaacataagggaccaacttaaaacctaaa 26845563  T
Q  114 ataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||||||||  ||||||||||||| ||||    
T  26845564 ataaacataagggaccaaacatgcaattcagcc 26845596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 32622469 - 32622600
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||||||||||||| |||||||||| || |||  ||||||||| ||| ||||||||||| ||| |||||||| ||| |||    
T  32622469 ttattccaacgtgagtaacgttttggaccaacttaaaacttttaatacgtaaaagaccaacttcaaacttttaaaacatgaaggaccaacttaaaaacta 32622568  T
Q  112 aaataaacataaggggtcaaacatgcaattaa 143  Q
    ||||||||||||||| ||||||||||||||||    
T  32622569 aaataaacataagggatcaaacatgcaattaa 32622600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 3217417 - 3217283
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||  |||||||||||| | |||||| |||||||||    
T  3217417 ttattccaacgtgagtaacgttttagaccaacttgaaaattttaaaacataatggaccaacttgaaacctttaaaacataagggaccaacatgaaaccta 3217318  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    | ||| ||| |||||  ||||||||||||||||||    
T  3217317 agatatacacaagggaccaaacatgcaattaagcc 3217283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 15988530 - 15988663
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||| ||| |||||| ||||||| |    
T  15988530 ttattccaatgtgagtaatgttttggaccaacttaaaacttttaaaatataagggaccaacttgaaacttttaaaacat-aaggaccaacatgaaaccga 15988628  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||   ||||| ||||||||||||    
T  15988629 aaataaacataaggacccaaacctgcaattaagcc 15988663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 27956857 - 27956723
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||| |||| ||||||||||||||||||||||||||||| ||||||||||| || ||| ||||||||||| ||| ||| | || ||| |||    
T  27956857 ttattccaacgtgggtaatgttttggaccaacttgaaacttttaaaacgtaagggaccaatttaaaacttttaaaacatgaaggacctatttaaaaacta 27956758  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||| |||||||||||||||||||    
T  27956757 aaataaacataagggatcaaacatgcaattaagcc 27956723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 43971797 - 43971928
Alignment:
Q  15 ttctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaa 114  Q
    |||||| |||||||||  |||| |||||| ||||||||||||||||  |||||||||||||||| |||||||||| |    |||||||||||||||||||    
T  43971797 ttctaacgtgagtaacaatttgaaccaacatgaaacttttaaaacactagggaccaacttgaaacttttaaaacacatgtgaccaacttgaaacctaaaa 43971896  T
Q  115 taaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||  ||||||||||||||||||    
T  43971897 taaacataagggaccaaacatgcaattaagcc 43971928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 13490306 - 13490172
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||||||||||||| ||||||||||||| |||| ||||||||| ||| ||||||||||||||| | |||||| ||| |||    
T  13490306 ttattccaacgtgagtaacgttttggaccaacttaaaacttttaaaacgtaagagaccaacttaaaacttttaaaacataaaggatcaacttaaaaacta 13490207  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    || |||||||||| | ||| || ||||||||||||    
T  13490206 aagtaaacataagagatcagacctgcaattaagcc 13490172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 13140400 - 13140288
Alignment:
Q  34 ttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaac 133  Q
    ||||||||||||||||| |||||||| |||| ||||||||| ||| ||||||||||||||  |||||||| |||||||||||||||||||||  ||||||    
T  13140400 ttggaccaacttgaaacctttaaaacgtaagtgaccaacttaaaacttttaaaacataaaagaccaacttaaaacctaaaataaacataaggcatcaaac 13140301  T
Q  134 atgcaattaagcc 146  Q
    |||||| ||||||    
T  13140300 atgcaagtaagcc 13140288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 6795452 - 6795583
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||| ||| || |||||| ||||| |||||||| ||||||||||||| | |||||||||||| ||| ||||||||||||| | |||||||| |||||||    
T  6795452 ttattataatgttagtaacattttgaaccaactttaaacttttaaaacgttagggaccaactttaaacttttaaaacataatggaccaacttaaaaccta 6795551  T
Q  112 aaataaacataaggggtcaaacatgcaattaa 143  Q
    ||||||| ||| ||| ||||||||||||||||    
T  6795552 aaataaatataggggatcaaacatgcaattaa 6795583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 146
Target Start/End: Original strand, 14473821 - 14473944
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacata 122  Q
    ||||||||||||||||||||||||||||| | |||||| |||  |||||||| ||| ||||||||||||| | ||| |||||||||||||||||||| ||    
T  14473821 tgagtaacgttttggaccaacttgaaactctcaaaacaaaagacaccaacttaaaacttttaaaacataagggacctacttgaaacctaaaataaacgta 14473920  T
Q  123 aggggtcaaacatgcaattaagcc 146  Q
    |||||  |||||||||| ||||||    
T  14473921 aggggctaaacatgcaactaagcc 14473944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 29526714 - 29526596
Alignment:
Q  25 agtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataag 124  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||  ||| |||||||| | ||||| |||||| |||||||||||||||     
T  29526714 agtaacgttttggaccaacttgaaacttttaaaacgtaagagaccaacttgaaa-ctttcaaacataagggaccaaattgaaaactaaaataaacataaa 29526616  T
Q  125 gggtcaaacatgcaattaag 144  Q
    || || ||||||||||||||    
T  29526615 ggatccaacatgcaattaag 29526596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 146
Target Start/End: Original strand, 3221118 - 3221241
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacata 122  Q
    ||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||| | |||||| ||||| |||| ||| ||| |    
T  3221118 tgagtaacgttttagaccaacttgaaaattttaaaacataatggaccaacttgaaacttttaaaacataagggaccaacatgaaatctaagatatacaca 3221217  T
Q  123 aggggtcaaacatgcaattaagcc 146  Q
    | ||  ||||||||| ||||||||    
T  3221218 acggaccaaacatgctattaagcc 3221241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 24065994 - 24065872
Alignment:
Q  24 gagtaacgttttggaccaacttgaaacttttaaaacataag-ggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacata 122  Q
    |||||| ||||| |||||||||||||||||||||||||||  |||| | ||||||| ||||||||||||| | ||||| ||||||||| ||||||||| |    
T  24065994 gagtaatgttttagaccaacttgaaacttttaaaacataaaaggacaagcttgaaacttttaaaacataagggaccaaattgaaacctcaaataaacaca 24065895  T
Q  123 aggggtcaaacatgcaattaagc 145  Q
    |||| |||||||| |||||||||    
T  24065894 agggatcaaacattcaattaagc 24065872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 24284080 - 24284211
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||| |||| ||||||| |||||||  ||||||||||||||||||| ||||| | | ||||| ||| ||||||||||||| | ||||| ||| ||||||    
T  24284080 ttattttaagatgagtaatgttttgggtcaacttgaaacttttaaaatataagagtcaaacttaaaacttttaaaacataagggaccaatttgtaaccta 24284179  T
Q  112 aaataaacataaggggtcaaacatgcaattaa 143  Q
    |||||||||| |||||  ||||||||||||||    
T  24284180 aaataaacatgaggggctaaacatgcaattaa 24284211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 39060405 - 39060306
Alignment:
Q  47 aaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||||| || |||||||||||||| ||| ||||||||||| | | |||||||| ||| |||||||||||||||||| |||||||||||||||||||    
T  39060405 aaacttttaagacgtaagggaccaacttaaaacttttaaaacattagggaccaacttaaaaactaaaataaacataagggatcaaacatgcaattaagcc 39060306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 24015930 - 24015813
Alignment:
Q  25 agtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataag 124  Q
    ||||| ||||||||||||| ||||| ||| ||||| ||| |||||||||| ||| ||||||||||||| | | |||||||||| ||||||||||||||||    
T  24015930 agtaatgttttggaccaacatgaaattttcaaaacgtaaaggaccaacttaaaacttttaaaacataagggatcaacttgaaaactaaaataaacataag 24015831  T
Q  125 gggtcaaacatgcaattaa 143  Q
    || | ||||||||||||||    
T  24015830 ggat-aaacatgcaattaa 24015813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 27957012 - 27957126
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacata 122  Q
    |||||||||||||||||||||||||||| |||||| | ||| ||||||| || ||| |||||||| ||||   ||| |||||||||||||||||||||||    
T  27957012 tgagtaacgttttggaccaacttgaaacatttaaagcgtaacggaccaagttaaaacttttaaaatataagagacctacttgaaacctaaaataaacata 27957111  T
Q  123 aggggtcaaacatgc 137  Q
    || | ||||||||||    
T  27957112 agagatcaaacatgc 27957126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 1352954 - 1352830
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||| |||| |||| ||||||||| ||||||||||||  |||| ||||||||| |||||| ||||| | || | ||||| || |||||||||||||||||    
T  1352954 gtgaataacattttagaccaacttaaaacttttaaaatgtaagagaccaacttaaaatttgtaaaatacaagggaccaatttaaaacctaaaataaacat 1352855  T
Q  122 aaggggtcaaacatgcaattaagcc 146  Q
    ||||  |||||||||||||||||||    
T  1352854 aaggaatcaaacatgcaattaagcc 1352830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 142
Target Start/End: Original strand, 13490454 - 13490583
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||||||||| ||| |||||||||||||||||||||| | |||||||||||||| ||  |||||||||||||   |  ||||||||| |||    
T  13490454 ttattccaatgtgagtaacattt-ggaccaacttgaaacttttaaagcgtaagggaccaacttaaatcttttaaaacataagagagtaacttgaaaacta 13490552  T
Q  112 aaataaacataaggggtcaaacatgcaatta 142  Q
    ||||||| ||||| | |||||||||||||||    
T  13490553 aaataaatataagtgatcaaacatgcaatta 13490583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 43513849 - 43513974
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||| |||| ||||| ||||||||||||   ||||||| ||||||| |||||| ||| ||| || ||||||   ||||||||||||||||| ||||||||    
T  43513849 gtgaataacattttgaaccaacttgaaaacattaaaacgtaagggatcaactttaaactttcaagacataagagaccaacttgaaacctaatataaacat 43513948  T
Q  122 aaggggtcaaacatgcaattaagccg 147  Q
    ||||| |||||||||||| |||||||    
T  43513949 aagggatcaaacatgcaagtaagccg 43513974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 1353112 - 1353174
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaactt 74  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  1353112 ttattctaagatgagtaacattttggaccaacttgaaacttttaaaacataagagaccaactt 1353174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 32622293 - 32622216
Alignment:
Q  69 caacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||| |||| |||||||||||||   |||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  32622293 caactggaaacttttaaaacataagagaccaacttgaaaactaaaataaacataagggatcaaacatgcaattaagcc 32622216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 3217498 - 3217569
Alignment:
Q  75 gaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||| ||||||||||||  | ||||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  3217498 gaaacttttaaaacataggggaccaacttgaaacctgaaataaacacaaggggacaaacatgcaattaagcc 3217569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 6412577 - 6412463
Alignment:
Q  31 gttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtca 130  Q
    ||||||||||||||||||||| |||||||||||||| |||| || ||| |||| |||  |||||  ||||||| |||||| ||||||||||||| |  |     
T  6412577 gttttggaccaacttgaaactcttaaaacataagggtccaatttaaaactttt-aaatgtaaaggtccaacttaaaacctgaaataaacataagagaccg 6412479  T
Q  131 aacatgcaattaagcc 146  Q
     |||||||||||||||    
T  6412478 cacatgcaattaagcc 6412463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 13140598 - 13140677
Alignment:
Q  67 accaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||||||| |||||||| |||||  |||||||| ||| |||||||||||| |||||  ||||||||||||||||||    
T  13140598 accaacttgaaacttttaaaatataaatgaccaacttaaaatctaaaataaacacaagggaccaaacatgcaattaagcc 13140677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 32622321 - 32622255
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaa 78  Q
    ||||||||| ||  ||||||||||||| ||||| ||||||||||||||||||| |||||||||||||    
T  32622321 ttattctaacgtaggtaacgttttggatcaactggaaacttttaaaacataagagaccaacttgaaa 32622255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 143
Target Start/End: Original strand, 1353136 - 1353214
Alignment:
Q  65 ggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaa 143  Q
    |||||||||||||| |||||||||||||   |||||||| ||||||||||||||||| || |  ||||||| |||||||    
T  1353136 ggaccaacttgaaacttttaaaacataagagaccaacttaaaacctaaaataaacatgagagaccaaacatacaattaa 1353214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 14424287 - 14424237
Alignment:
Q  96 accaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  14424287 accaacttgaaacctaaaataaacataagaggctaaacatgcaattaagcc 14424237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 15988113 - 15988048
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaa 78  Q
    |||||| || |||||||| | |||||||||||||| |||||| ||||||||||||||||||||||||    
T  15988113 ttattccaatgtgagtaatgatttggaccaacttggaacttt-aaaacataagggaccaacttgaaa 15988048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 37762315 - 37762415
Alignment:
Q  40 caacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaa 139  Q
    ||||||||||| |||||||  ||||||| ||| || ||| |||||||||||||   || || |||||| |||||||||||||||| | ||||| ||||||    
T  37762315 caacttgaaacctttaaaatgtaagggatcaatttaaaaattttaaaacataagagactaatttgaaaactaaaataaacataagagatcaaatatgcaa 37762414  T
Q  140 t 140  Q
    |    
T  37762415 t 37762415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 13140572 - 13140639
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaat 79  Q
    ||||| ||| ||||||||||| ||| ||||||||||||||||||||| ||||  ||||||||| ||||    
T  13140572 ttattataatgtgagtaacgtattgaaccaacttgaaacttttaaaatataaatgaccaacttaaaat 13140639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 14473594 - 14473548
Alignment:
Q  27 taacgttttggaccaacttgaaacttttaaaacataagggaccaact 73  Q
    |||| |||||||| ||||| |||||||||||||||||||||||||||    
T  14473594 taacattttggacaaacttaaaacttttaaaacataagggaccaact 14473548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 15988074 - 15988011
Alignment:
Q  81 tttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||||||| | |||||||||||||   ||||||||||||| || ||||||||||||||||||    
T  15988074 tttaaaacataagggaccaacttgaaact--aaataaacataagtggccaaacatgcaattaagcc 15988011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 38262812 - 38262922
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||||||| | |||||||||||  ||| ||||| |||||||||||| ||||| ||| || |||||| |||| ||||||||   |  | |||||||| ||    
T  38262812 ttattctaatgggagtaacgtttgagacaaacttaaaacttttaaaatataagagactaatttgaaacttttgaaacataagagattagcttgaaactta 38262911  T
Q  112 aaataaacata 122  Q
    |||||||||||    
T  38262912 aaataaacata 38262922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 14473585 - 14473504
Alignment:
Q  65 ggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||| ||||| ||| ||||||||||||| | |||||||  |||| ||||||||||| ||| |  ||||||||||||||||||    
T  14473585 ggacaaacttaaaacttttaaaacataagggaccaactcaaaacttaaaataaacaaaagcgaccaaacatgcaattaagcc 14473504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 43971692 - 43971651
Alignment:
Q  105 aaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||||||||||||||||| ||||||||||| |||||||    
T  43971692 aaacctaaaataaacataagggatcaaacatgcatttaagcc 43971651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 6795245 - 6795185
Alignment:
Q  80 ttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaat 140  Q
    |||||||| ||||||||||||||| ||| |||||||||| ||||| | |||||||| ||||    
T  6795245 ttttaaaatataaagaaccaacttaaaaactaaaataaatataagagatcaaacatacaat 6795185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 13525269 - 13525333
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaa 86  Q
    |||| ||||||||| ||||||||||||  |||||||||||||| ||| ||||| ||| |||||||    
T  13525269 gtgaataacgttttagaccaacttgaattttttaaaacataagagacaaacttaaaacttttaaa 13525333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 36006244 - 36006319
Alignment:
Q  67 accaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaatta 142  Q
    |||||||| |||  |||||||||||||  |||||||| |||| ||||||||| ||||||  |||| ||||||||||    
T  36006244 accaacttaaaacatttaaaacataaatgaccaacttaaaacttaaaataaaaataaggaatcaatcatgcaatta 36006319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 39060387 - 39060349
Alignment:
Q  36 ggaccaacttgaaacttttaaaacataagggaccaactt 74  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  39060387 ggaccaacttaaaacttttaaaacattagggaccaactt 39060349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 32644089 - 32644048
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataag 64  Q
    |||||||| |||||||| ||||| ||||||||||||||||||    
T  32644089 tgagtaacattttggactaacttaaaacttttaaaacataag 32644048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 3217498 - 3217530
Alignment:
Q  46 gaaacttttaaaacataagggaccaacttgaaa 78  Q
    ||||||||||||||||| |||||||||||||||    
T  3217498 gaaacttttaaaacataggggaccaacttgaaa 3217530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 32644458 - 32644402
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaat 79  Q
    |||||||  |||||||| ||||| |||||||||||||||||| || |||||| ||||    
T  32644458 tgagtaatattttggactaacttcaaacttttaaaacataagagatcaacttaaaat 32644402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 36122064 - 36122108
Alignment:
Q  99 aacttgaaacctaaaataaacataaggggtcaaacatgcaattaa 143  Q
    |||||||||||||| |||||| ||||||  |||||||||||||||    
T  36122064 aacttgaaacctaatataaacgtaagggaccaaacatgcaattaa 36122108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 8e-39; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 22566423 - 22566301
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    ||||||||||||||||||||||  |||||||||||||| |||||||||||||||||| ||||||||||||| | ||||| || ||| |||||||||||||    
T  22566423 gtgagtaacgttttggaccaac--gaaacttttaaaacgtaagggaccaacttgaaacttttaaaacataagggaccaatttaaaaactaaaataaacat 22566326  T
Q  122 aaggggtcaaacatgcaattaagcc 146  Q
    ||||| |||||||||||||||||||    
T  22566325 aagggatcaaacatgcaattaagcc 22566301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 7460684 - 7460572
Alignment:
Q  31 gttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtca 130  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | | |||||||||| |||||||||||||||||| |||    
T  7460684 gttttggaccaacttgaaatttttaaaacgtaagggaccaacttgaaatttttaaaacataagggatcaacttgaaaactaaaataaacataagggatca 7460585  T
Q  131 aacatgcaattaa 143  Q
    |||||| ||||||    
T  7460584 aacatgaaattaa 7460572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 36469815 - 36469948
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||  ||| ||||| |||||| |||    
T  36469815 ttattccaacgtgagtaacattttggaccaacttgaaacttttaaaacgtaagggaccaacttaaaacttttaaaacacgaaggaccaatttgaaa-cta 36469913  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||| | |||||||||||||||||||    
T  36469914 aaataaacataagagatcaaacatgcaattaagcc 36469948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 6376498 - 6376387
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||||| ||||||||| | |||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  6376498 ttattcaaatgtgagaaacgttttgaatcaacttgaaacttttaaaacctaagggaccaacttaaaacttttaaaacataaagaaccaacttaaaaccta 6376399  T
Q  112 aaataaacataa 123  Q
    ||||||||||||    
T  6376398 aaataaacataa 6376387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 143
Target Start/End: Complemental strand, 34535812 - 34535695
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacata 122  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| |||||||||| |    |||||||| ||| ||||||||||||||    
T  34535812 tgagtaacgttttggaccaacttaaaacttttaaaacgtaagggaccagcttgaaacttttaaaacaga---gaccaacttaaaaactaaaataaacata 34535716  T
Q  123 aggggtcaaacatgcaattaa 143  Q
    |||| ||||||||||||||||    
T  34535715 agggatcaaacatgcaattaa 34535695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 48461924 - 48461793
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||||||| ||||||||||||||||| |||||| | ||||||||||| |||| ||||||||| ||| ||||||||||||||| | |||||| ||| |||    
T  48461924 ttattctaacgtgagtaacgttttggatcaacttcatacttttaaaacgtaagagaccaacttaaaacttttaaaacataaaggatcaacttaaaaacta 48461825  T
Q  112 aaataaacataaggggtcaaacatgcaattaag 144  Q
    ||| ||||||||| | || ||||||||||||||    
T  48461824 aaacaaacataagagatc-aacatgcaattaag 48461793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 48462073 - 48462205
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| |||| | ||||||||||||| |||||| |||||||||||||||||  ||||||||||||| ||||||||||||| | |||||||| ||| |||    
T  48462073 ttattccaaggcgggtaacgttttggatcaacttaaaacttttaaaacataaatgaccaacttgaaacttttaaaacataagggaccaacttaaaaacta 48462172  T
Q  112 aaat-aaacataaggggtcaaacatgcaattaa 143  Q
    |||| ||||||||| | ||||||||| ||||||    
T  48462173 aaataaaacataagagatcaaacatgtaattaa 48462205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 34535964 - 34536095
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||| || ||||||||||||| |||||| |||| ||||||||| ||| ||||||||  ||| | |||||||| ||| |||    
T  34535964 ttattccaacgtgagtaacgtttttgatcaacttgaaacttctaaaacgtaagagaccaacttaaaacttttaaaatgtaagggaccaacttaaaaacta 34536063  T
Q  112 aaataaacataaggggtcaaacatgcaattaa 143  Q
    | ||||||||||||| ||||||||||||||||    
T  34536064 agataaacataagggatcaaacatgcaattaa 34536095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 24185779 - 24185670
Alignment:
Q  33 tttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaa 132  Q
    |||||||||||||||||| ||||||||||||| |||||| || ||| ||||||||||||||| |||||||||||||||||||||||||  || |  ||||    
T  24185779 tttggaccaacttgaaacctttaaaacataagtgaccaa-ttaaaacttttaaaacataaaggaccaacttgaaacctaaaataaacacgagtgaccaaa 24185681  T
Q  133 catgcaattaa 143  Q
    |||||||||||    
T  24185680 catgcaattaa 24185670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 6376640 - 6376771
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||| ||| |||| ||||||||||||| ||||| |||  |||||||| ||||  |||||| | ||  ||||||||||||||  |||||||| |||||||    
T  6376640 ttattttaacgtgaataacgttttggactaacttaaaaactttaaaacgtaagataccaacctaaagcttttaaaacataaatgaccaacttaaaaccta 6376739  T
Q  112 aaataaacataaggggtcaaacatgcaattaa 143  Q
    |||||||||||| || |||||| |||||||||    
T  6376740 aaataaacataacggatcaaacttgcaattaa 6376771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 24188205 - 24188284
Alignment:
Q  67 accaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||||||| | ||||||||||| | ||||||||||||||||| ||||||||||| | |||||||||||||||||||    
T  24188205 accaacttgaaactcttaaaacataagggaccaacttgaaacctaatataaacataagcgatcaaacatgcaattaagcc 24188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 43511001 - 43510880
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||| |||||||||||||||||||||||| ||||||| |||||  | |||||||||| ||||||||||||| |||  ||||| |||| | ||||||||||    
T  43511001 gtgattaacgttttggaccaacttgaaacatttaaaatataaga-atcaacttgaaacttttaaaacataatgaattaacttaaaacttgaaataaacat 43510903  T
Q  122 aaggggtcaaacatgcaattaag 144  Q
    ||| |  |||||||| |||||||    
T  43510902 aagagaccaaacatgtaattaag 43510880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 7460876 - 7460953
Alignment:
Q  66 gaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaa 143  Q
    |||||| |||||| |||||||||||||   |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  7460876 gaccaatttgaaacttttaaaacataagtgaccaacttgaaaactaaaataaacataagggatcaaacatgcaattaa 7460953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 17814054 - 17813974
Alignment:
Q  66 gaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||| |||||| |||||||||||||   ||||||||||||||||||||||||||||| | ||||||||| |||||||||    
T  17814054 gaccaatttgaaacttttaaaacataagagaccaacttgaaacctaaaataaacataagagatcaaacatggaattaagcc 17813974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 7460851 - 7460917
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaa 78  Q
    |||||| || |||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  7460851 ttattccaacgtgagtaacgttttagaccaatttgaaacttttaaaacataagtgaccaacttgaaa 7460917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 24188189 - 24188245
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaa 78  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||    
T  24188189 gtgagtaacattttgaaccaacttgaaactcttaaaacataagggaccaacttgaaa 24188245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 10017894 - 10018005
Alignment:
Q  32 ttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaa 131  Q
    |||| ||| |||||||||||||||||||| ||  ||| ||||  ||| |||||||||||||   |||||||| |||||||||||||||||||| |  |||    
T  10017894 ttttagactaacttgaaacttttaaaacaaaatagacgaactgaaaacttttaaaacataagagaccaacttaaaacctaaaataaacataagagaccaa 10017993  T
Q  132 acatgcaattaa 143  Q
    |||| |||||||    
T  10017994 acatacaattaa 10018005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 8560751 - 8560681
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataa 92  Q
    |||||||||||||||||||||| ||||||||||||||  || ||||||||||| ||| |||||||| ||||    
T  8560751 gtgagtaacgttttggaccaacatgaaacttttaaaatgtaggggaccaacttaaaacttttaaaatataa 8560681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 9997935 - 9998027
Alignment:
Q  32 ttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataag 124  Q
    |||| ||| |||||||||||||||||||||||| ||| ||||   ||  |||||||||||| | |||||| | ||||||| ||||||||||||    
T  9997935 ttttcgactaacttgaaacttttaaaacataagagacgaactaacaacatttaaaacataagggaccaacctaaaacctataataaacataag 9998027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 7150032 - 7149974
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaattt 81  Q
    ||||||| | ||||||| ||||| ||||||||||||||||||||| | |||||||||||    
T  7150032 tgagtaatggtttggacaaacttaaaacttttaaaacataagggaacgacttgaaattt 7149974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 43511188 - 43511262
Alignment:
Q  69 caacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaa 143  Q
    |||||||||| ||||||||||||||  | || ||| |||| ||||||||||||||| | |||||||| |||||||    
T  43511188 caacttgaaacttttaaaacataaaagatcatcttaaaacttaaaataaacataagagatcaaacatacaattaa 43511262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 10017724 - 10017671
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagg 65  Q
    |||||||||  |||||||| |||||||| ||||| |||||||||||||||||||    
T  10017724 ttattctaaattgagtaacattttggactaacttaaaacttttaaaacataagg 10017671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 17814054 - 17814013
Alignment:
Q  37 gaccaacttgaaacttttaaaacataagggaccaacttgaaa 78  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  17814054 gaccaatttgaaacttttaaaacataagagaccaacttgaaa 17814013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 43511179 - 43511211
Alignment:
Q  31 gttttggaccaacttgaaacttttaaaacataa 63  Q
    |||||||| ||||||||||||||||||||||||    
T  43511179 gttttggatcaacttgaaacttttaaaacataa 43511211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 54341335 - 54341204
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||| ||  ||||| || ||  |||    
T  54341335 ttattccaacgtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaacttaaaacttttaaaacatgaacgaccaatttaaatacta 54341236  T
Q  112 aaataaacataaggggtcaaacatgcaattaa 143  Q
    ||||||||||||||| ||||||||||||||||    
T  54341235 aaataaacataagggatcaaacatgcaattaa 54341204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 33419822 - 33419956
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || |||||||||||||| | ||||||| ||||||||||||| |||||||||| ||||||| ||||||||||||| | |||||||| |||  ||    
T  33419822 ttattccaacgtgagtaacgttttagtccaacttaaaacttttaaaacgtaagggaccatcttgaaacttttaaaacataagggaccaacttaaaaagta 33419921  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||| |||||||||||||||||||    
T  33419922 aaataaacataagggatcaaacatgcaattaagcc 33419956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 48618612 - 48618478
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||||||| ||||||||||||||| |||||||||||| | ||||||||||||| ||||| || ||| |||||||||||||| |||||| || |||||||    
T  48618612 ttattctaatgtgagtaacgttttgaaccaacttgaaattgttaaaacataaggaaccaatttaaaacttttaaaacataaataaccaatttaaaaccta 48618513  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||   |||| ||| |||||||||    
T  48618512 aaataaacataaggaaccaaatatgtaattaagcc 48618478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 33241968 - 33241846
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||| |||||||||||||||| ||||||||||||||| |||||| ||||| || ||| ||||||||||||| | | |||||||||||||||||||||| |    
T  33241968 gtgactaacgttttggaccaatttgaaacttttaaaatataaggaaccaaattaaaacttttaaaacataagggaacaacttgaaacctaaaataaactt 33241869  T
Q  122 aaggggtcaaacatgcaattaag 144  Q
    |||||  ||| ||||||||||||    
T  33241868 aagggaccaaccatgcaattaag 33241846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 30548023 - 30548125
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaac--ttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaaca 120  Q
    ||||||||||||||||||||||||||||||||||||| |||| || ||||  |||||| |||||||| |||  | |||||||||||||||||||||||||    
T  30548023 tgagtaacgttttggaccaacttgaaacttttaaaacgtaagagatcaacttttgaaacttttaaaagatatgggaccaacttgaaacctaaaataaaca 30548122  T
Q  121 taa 123  Q
    |||    
T  30548123 taa 30548125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 37285680 - 37285546
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||| ||| |||| ||||||||  |||||||||||||| |||||||| |||||||  ||||||||| |||||||||  || ||| ||||||  ||||||    
T  37285680 ttattttaacgtgaataacgtttgagaccaacttgaaacctttaaaacgtaagggattaacttgaaacttttaaaactgaaggaatcaacttataaccta 37285581  T
Q  112 aaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||||| | ||||||| |||||||||    
T  37285580 aaataaacataagggattaaacatgtaattaagcc 37285546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 37285838 - 37285960
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    ||||||||||||||| |||||||||||| |||||||| |||| ||  |||||||||| |||||||| |||| | |||||||| |||||||||||||||||    
T  37285838 gtgagtaacgttttgaaccaacttgaaatttttaaaatataaagggtcaacttgaaacttttaaaatataagggaccaacttaaaacctaaaataaacat 37285937  T
Q  122 aaggggtcaaacatgcaattaag 144  Q
    | ||    |||||||||||||||    
T  37285938 agggaactaaacatgcaattaag 37285960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 19540956 - 19540851
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||||||| ||||||||||||||| ||||| || ||||| ||||||||||| |||||||| | ||| ||||||||||||| | |||||||| |||||||    
T  19540956 ttattctaatgtgagtaacgttttgaaccaatttaaaactgttaaaacataaaggaccaacataaaacttttaaaacataagggaccaacttaaaaccta 19540857  T
Q  112 aaataa 117  Q
    ||||||    
T  19540856 aaataa 19540851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 51388049 - 51388162
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    ||||||||||||||||||||| || ||||||||||||  ||||||| |||||| ||| |||||||||||||   |||||||| ||| |||||||||||||    
T  51388049 gtgagtaacgttttggaccaatttaaaacttttaaaatgtaagggatcaacttaaaacttttaaaacataagagaccaacttaaaaactaaaataaacat 51388148  T
Q  122 aaggggtcaaacat 135  Q
    ||||  ||||||||    
T  51388149 aaggaatcaaacat 51388162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 48618781 - 48618896
Alignment:
Q  31 gttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtca 130  Q
    ||||||||| ||||| |||  |||||||| |||| ||||||||| |||| ||| ||||||||   ||||||||||| ||||||||||| ||||||| |||    
T  48618781 gttttggacaaactttaaaactttaaaacttaagagaccaacttaaaatgtttcaaacataagagaccaacttgaagcctaaaataaatataagggatca 48618880  T
Q  131 aacatgcaattaagcc 146  Q
    ||||||||||||||||    
T  48618881 aacatgcaattaagcc 48618896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 33419662 - 33419592
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataa 92  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||| ||||    
T  33419662 gtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaacttaaaacttttaaaagataa 33419592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 19541129 - 19541248
Alignment:
Q  27 taacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggg 126  Q
    ||||||||| || ||| |||||| ||||||||  ||||||||||||||||||  | |||||||||||  || ||||| ||||| ||||||||||||||      
T  19541129 taacgttttagatcaatttgaaaattttaaaatgtaagggaccaacttgaaacgtataaaacataaaagactaacttaaaaccaaaaataaacataagat 19541228  T
Q  127 gtcaaacatgcaattaagcc 146  Q
     |||||||||||||||||||    
T  19541229 atcaaacatgcaattaagcc 19541248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 7015469 - 7015372
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaa-tttttaaaacataaagaaccaacttgaaac 108  Q
    ||||||||  |||||||| |||||||||||| | |||||||||||||| |||||||||||||| ||| |||| ||||||||||||| |||||| ||||    
T  7015469 ttattctagtgtgagtaatgttttggaccaaatcgaaacttttaaaacttaagggaccaacttaaaacttttaaaaacataaagaatcaacttaaaac 7015372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 40484929 - 40485013
Alignment:
Q  31 gttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaata 116  Q
    ||||||| |||||||||||| ||||||||||||  |||||| |||||| |||| |||||||| | |||||||||||||||||||||    
T  40484929 gttttggtccaacttgaaacctttaaaacataaatgaccaatttgaaactttt-aaacataagggaccaacttgaaacctaaaata 40485013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 54111518 - 54111417
Alignment:
Q  42 acttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaatt 141  Q
    ||||||||||||||||||||||  || |||||| ||| ||||||||||||||| | |||| | |||  ||||||| | ||||||| ||||||||||||||    
T  54111518 acttgaaacttttaaaacataaatgaacaacttaaaacttttaaaacataaaggatcaacataaaatgtaaaatacatataagggatcaaacatgcaatt 54111419  T
Q  142 aa 143  Q
    ||    
T  54111418 aa 54111417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 30547846 - 30547738
Alignment:
Q  36 ggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacat 135  Q
    |||||||||| |||| |||||||  |||||||||||||| ||| |||||||||||||   |||||| | |||  ||||||||||||||| | || |||||    
T  30547846 ggaccaacttaaaacctttaaaaagtaagggaccaacttaaaacttttaaaacataagcgaccaacct-aaaattaaaataaacataagagatc-aacat 30547749  T
Q  136 gcaattaagcc 146  Q
    |||||||||||    
T  30547748 gcaattaagcc 30547738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 39639849 - 39639900
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaactt 74  Q
    |||||||| ||||||| ||| ||| ||||||||||| |||||||||||||||    
T  39639849 tgagtaacattttggatcaatttgtaacttttaaaatataagggaccaactt 39639900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 7015608 - 7015685
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaaca 89  Q
    |||||| || || |||||| |||| ||| ||||| ||||||| |||| |||| || ||||||| ||||||||||||||    
T  7015608 ttattccaacgtaagtaacattttagacaaacttaaaactttcaaaatataaagggccaacttaaaatttttaaaaca 7015685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 8e-36; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 33992457 - 33992333
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||| |||||||||| |||||||||||||||||||||| ||||||||||| || ||| || |||||||||| | || ||||||||| |||||||||||||    
T  33992457 gtgaataacgttttgaaccaacttgaaacttttaaaacgtaagggaccaatttaaaacttataaaacataagggacgaacttgaaaactaaaataaacat 33992358  T
Q  122 aaggggtcaaacatgcaattaagcc 146  Q
    ||||| |||||||||||||||||||    
T  33992357 aagggatcaaacatgcaattaagcc 33992333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 16642882 - 16642751
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    |||||| || ||| |||||||||| |||||||||||||| ||||||||  ||| |||||||||||||| |||||||||||| | |||||||| |||||||    
T  16642882 ttattccaacgtgcgtaacgttttagaccaacttgaaacctttaaaacgcaagagaccaacttgaaatatttaaaacataagggaccaacttaaaaccta 16642783  T
Q  112 aaataaacataaggggtcaaacatgcaattaa 143  Q
    ||||||||||||||| |||||| |||||||||    
T  16642782 aaataaacataagggatcaaacttgcaattaa 16642751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 23 - 146
Target Start/End: Original strand, 33992627 - 33992750
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacata 122  Q
    |||||||||||||| ||||| || ||||||||||||| ||||| ||||| || ||| ||||||||||||||| ||||| || ||| ||||||||||||||    
T  33992627 tgagtaacgttttgaaccaatttaaaacttttaaaacgtaaggaaccaatttaaaacttttaaaacataaaggaccaatttaaaaactaaaataaacata 33992726  T
Q  123 aggggtcaaacatgcaattaagcc 146  Q
    |||| |||||||||||||||||||    
T  33992727 agggatcaaacatgcaattaagcc 33992750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 19935552 - 19935432
Alignment:
Q  25 agtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataag 124  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||| | |||||||| ||||| ||||||||||||||    
T  19935552 agtaatgttttggaccaacttgaa-cttttaaaacatcagggaccaacttgaaatttataaaacataatggaccaacttaaaaccaaaaataaacataag 19935454  T
Q  125 gggtcaaacatgcaattaagcc 146  Q
     |  | ||||||||||||||||    
T  19935453 agacccaacatgcaattaagcc 19935432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 25508095 - 25508216
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacat 121  Q
    |||||||||||||||||||||||| |||||   |||| |||| |||| ||||||||| ||||||||||||| | | |||||| ||||||||||| ||| |    
T  25508095 gtgagtaacgttttggaccaacttaaaactaaaaaaatataaaggacgaacttgaaacttttaaaacataagggagcaacttaaaacctaaaatcaactt 25508194  T
Q  122 aaggggtcaaacatgcaattaa 143  Q
    |||||  |||||||||||||||    
T  25508195 aagggaccaaacatgcaattaa 25508216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 19328527 - 19328409
Alignment:
Q  25 agtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataag 124  Q
    ||||||||||| ||||||||| ||| ||| ||||  ||||  |  ||| | |||||||||||| |||||| |||||||| ||| ||||||||||||||||    
T  19328527 agtaacgttttagaccaactttaaattttgaaaatgtaagaaattaacataaaatttttaaaatataaaggaccaacttaaaaactaaaataaacataag 19328428  T
Q  125 gggtcaaacatgcaattaa 143  Q
    || |||| |||||||||||    
T  19328427 ggatcaatcatgcaattaa 19328409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 34065283 - 34065353
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataa 92  Q
    ||||||||||||||  |||||||| |||||||||||| ||||||||||||||| ||| |||||||||||||    
T  34065283 gtgagtaacgtttttaaccaactttaaacttttaaaatataagggaccaacttaaaacttttaaaacataa 34065353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 32291075 - 32291188
Alignment:
Q  12 ttattctaaggtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaaccta 111  Q
    ||||| ||| ||||||||| ||||  | |||||| |||| |||||||| |||| ||| ||||| ||||||||||||||||| |||  ||||| |||||||    
T  32291075 ttattttaaagtgagtaaccttttaaatcaacttaaaacctttaaaacgtaagagactaactttaaatttttaaaacataaggaattaacttaaaaccta 32291174  T
Q  112 aaataaacataagg 125  Q
    ||||||||| ||||    
T  32291175 aaataaacaaaagg 32291188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 32290905 - 32290831
Alignment:
Q  40 caacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaata 116  Q
    ||||||||||||||||||||||||   ||||||| |||||||||||||| ||| | | |||||| ||||||||||||    
T  32290905 caacttgaaacttttaaaacataaa--accaactagaaatttttaaaacttaagggatcaacttaaaacctaaaata 32290831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 34065326 - 34065369
Alignment:
Q  36 ggaccaacttgaaacttttaaaacataagggaccaacttgaaat 79  Q
    |||||||||| |||||||||||||||||| ||||||||| ||||    
T  34065326 ggaccaacttaaaacttttaaaacataagagaccaacttaaaat 34065369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 16643054 - 16643128
Alignment:
Q  69 caacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaa 143  Q
    |||||||||| |||||||| |||||| |||||| | |||||||||||| || |||| |  ||||||| |||||||    
T  16643054 caacttgaaacttttaaaatataaaggaccaacataaaacctaaaatacacgtaagagaccaaacatacaattaa 16643128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 18697584 - 18697490
Alignment:
Q  52 tttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    ||||||||||||| || |||||| ||  |||||||  ||||   |||||| |||||  |||||||| |||||||  |||||||||||||||||||    
T  18697584 tttaaaacataagagatcaacttaaatcttttaaagtataagagaccaacatgaaatttaaaataagcataaggaatcaaacatgcaattaagcc 18697490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 5479981 - 5480066
Alignment:
Q  47 aaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaa 132  Q
    ||||||||||||||||| | ||||||||| ||| ||| ||||| || | |  || || |||||||||||||| ||||||| |||||    
T  5479981 aaacttttaaaacataacgaaccaacttgcaatctttgaaacaaaacgtattaatttaaaacctaaaataaaaataagggatcaaa 5480066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 19935720 - 19935772
Alignment:
Q  22 gtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaactt 74  Q
    ||||||||| |||| || |||||| |||||||||||||| |||| ||||||||    
T  19935720 gtgagtaacattttagatcaacttaaaacttttaaaacacaaggtaccaactt 19935772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 25507921 - 25507830
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaat 115  Q
    |||||||| | | |||||||||| ||| ||||||||||||| |||  ||| | ||| ||||||||||  ||||||||| || |||||||||||    
T  25507921 tgagtaacttgtaggaccaacttaaaatttttaaaacataaaggattaacataaaacttttaaaaca-caagaaccaatttaaaacctaaaat 25507830  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 34065589 - 34065645
Alignment:
Q  23 tgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaat 79  Q
    ||||||||| |||  |||||||| ||||||||||||||||||  |||||||| ||||    
T  34065589 tgagtaacgcttttaaccaacttaaaacttttaaaacataagaaaccaacttaaaat 34065645  T

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Target: scaffold0400 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 145
Target Start/End: Original strand, 9865 - 9986
Alignment:
Q  24 gagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataa 123  Q
    ||||||| ||||| ||||| || ||||||||||||| ||||  | || ||||||| |||||||||||||   |||||||| |||||||||||||||||||    
T  9865 gagtaacattttgtaccaaattaaaacttttaaaacgtaagcaatcatcttgaaacttttaaaacataagagaccaacttaaaacctaaaataaacataa 9964  T
Q  124 ggggtcaaacatgcaattaagc 145  Q
    | | ||||||||||||||||||    
T  9965 gagatcaaacatgcaattaagc 9986  T

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Target: scaffold0400; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 9674 - 9577
Alignment:
Q  49 acttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||| |||||| ||||||||||| |||||| ||||||||||||| | |||| ||| |||  ||||||||||||||| | ||||||||| |||||||||    
T  9674 acttataaaacgtaagggaccaatttgaaacttttaaaacataagggaccatcttaaaaattaaaataaacataagagatcaaacatggaattaagcc 9577  T

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Target: scaffold0400; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 9658 - 9624
Alignment:
Q  36 ggaccaacttgaaacttttaaaacataagggacca 70  Q
    ||||||| |||||||||||||||||||||||||||    
T  9658 ggaccaatttgaaacttttaaaacataagggacca 9624  T

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Target: scaffold0365 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 145
Target Start/End: Original strand, 10508 - 10629
Alignment:
Q  24 gagtaacgttttggaccaacttgaaacttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataa 123  Q
    ||||||| ||||| ||||| || ||||||||||||| ||||  | || ||||||| |||||||||||||   |||||||| |||||||||||||||||||    
T  10508 gagtaacattttgtaccaaattaaaacttttaaaacgtaagcaatcatcttgaaacttttaaaacataagagaccaacttaaaacctaaaataaacataa 10607  T
Q  124 ggggtcaaacatgcaattaagc 145  Q
    | | ||||||||||||||||||    
T  10608 gagatcaaacatgcaattaagc 10629  T

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Target: scaffold0365; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 10317 - 10220
Alignment:
Q  49 acttttaaaacataagggaccaacttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||| |||||| ||||||||||| |||||| ||||||||||||| | |||| ||| |||  ||||||||||||||| | ||||||||| |||||||||    
T  10317 acttataaaacgtaagggaccaatttgaaacttttaaaacataagggaccatcttaaaaattaaaataaacataagagatcaaacatggaattaagcc 10220  T

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Target: scaffold0365; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 10301 - 10267
Alignment:
Q  36 ggaccaacttgaaacttttaaaacataagggacca 70  Q
    ||||||| |||||||||||||||||||||||||||    
T  10301 ggaccaatttgaaacttttaaaacataagggacca 10267  T

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Target: scaffold0015 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 47417 - 47490
Alignment:
Q  73 ttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||| |||||||||||||   |||||||| ||||||||||||||||||||||  ||||||||||||||||||    
T  47417 ttgaaacttttaaaacataagcgaccaacttaaaacctaaaataaacataagggaccaaacatgcaattaagcc 47490  T

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Target: scaffold0015; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 47338 - 47291
Alignment:
Q  96 accaacttgaaacctaaaataaacataaggggtcaaacatgcaattaa 143  Q
    |||||||||||| ||||||||||||| || | ||||||||||||||||    
T  47338 accaacttgaaatctaaaataaacattagagatcaaacatgcaattaa 47291  T

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Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 29681 - 29608
Alignment:
Q  73 ttgaaatttttaaaacataaagaaccaacttgaaacctaaaataaacataaggggtcaaacatgcaattaagcc 146  Q
    |||||||||||||||| |||   | |||||||||| |||||||||||||||| | ||||||||| |||||||||    
T  29681 ttgaaatttttaaaacgtaagagatcaacttgaaaactaaaataaacataagagatcaaacatgtaattaagcc 29608  T

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