View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2768_high_8 (Length: 346)
Name: NF2768_high_8
Description: NF2768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2768_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 12 - 284
Target Start/End: Original strand, 13060684 - 13060952
Alignment:
| Q |
12 |
atgaagttgttccagattaattctagatgagtatcccatacaaagccgatcattagacatgagaatataggataaatgtaaaagagtacccctaagcagg |
111 |
Q |
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| T |
13060684 |
atgaagttattccagattaattctagatgagtattc-atacaaagccgatcattagacatgagaata--ggataaatgtaaaagagtacccctaagcagg |
13060780 |
T |
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| Q |
112 |
ggccatgtttccagatcaaattgaatatgacatcatccaatgggagcctttttatgccacatatatccttatcaattttcctt-nnnnnnntccttatca |
210 |
Q |
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| T |
13060781 |
ggccatgtttccagatcaaattgaatatgacatcatccaatgggagcctttttatgccac--atatccttatcaattttccttaaaaaaaatccttatca |
13060878 |
T |
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| Q |
211 |
atttttaaattataacaatcaactattgttaattaatatattcataaaatttcaagaatcaaacctaacaattt |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13060879 |
atttttaaattataacaatcaactattgttaattaatatattcataaaatttcaagaatcaaacctaacaattt |
13060952 |
T |
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