View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2768_low_1 (Length: 617)
Name: NF2768_low_1
Description: NF2768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2768_low_1 |
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Alignment Details
Target: chr6 (Bit Score: 525; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 525; E-Value: 0
Query Start/End: Original strand, 18 - 606
Target Start/End: Original strand, 3655549 - 3656140
Alignment:
| Q |
18 |
agtgtttggatcgaatattggatgtcggatactcacacttgaggatgagattgttgaattgaaatatgtgaatacc-agtcttatatgaatgagttaaat |
116 |
Q |
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| T |
3655549 |
agtgtttagatcgaatattggatgtcggatactcacacttaaggatgagattgttgaattgaaatatgtgaatggttagtcttatatgaatgagttaaat |
3655648 |
T |
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| Q |
117 |
gctagatatataaaataggtgacatgcatacatgatgtcataacttttttggtagagatgcggtgtctccctctcgtttgatcgtggagcattgacatgt |
216 |
Q |
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| T |
3655649 |
gctagatatataaaataggtgacatgcatacatgatgtcttaacttttttggtagagatgtggtgtctccctctcgtttgatcgtggagcattgacatgt |
3655748 |
T |
|
| Q |
217 |
tattgctcacaacgctcaacccgacttcccccaaagagtggtatccatgc--gacatggttcaacttagtggaggggcagaagtgaatcatgggatattg |
314 |
Q |
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| T |
3655749 |
tattgctcacaacgctcaacccgacttcccccaaagagtggtatccatgcatgacatggttcaacttagtggaggggcagaagtgaatcatgggatattg |
3655848 |
T |
|
| Q |
315 |
gatccttgctctgttggttaggacgatgatacaaatttaggatgtgtggcactcatactttatggggagatacataagagagaagattcatatacataat |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3655849 |
gatccttgctctgttggttaggacgatgatacaaatttaggatgtgtggcactcatactttatggggagatacataagagagaagattcatatacataat |
3655948 |
T |
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| Q |
415 |
gtcttaaggctttagatgaagataatgtggtgtctcctactctaatggtcctgcaacattggcatgttgttacttacaacgctcccctaaacttaccaac |
514 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
3655949 |
gtcttaaggctttagatgaagataatgtggtgtctcctgctctaatggtcttgcaacattggcatgttgttacttacaacgctccactaaacttaccaac |
3656048 |
T |
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| Q |
515 |
aaattgtatcaaagtagacatctccttgtacaatgtagtttcgggatgaaccaagatgaagttggtgggcatgtggagcttgaggctgatga |
606 |
Q |
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| T |
3656049 |
aaattgtatcaaagtggacatctccttgtacaatgtagtttcgggatgaaccaagatgaagttggtgggcatgtggagcttgacgctgatga |
3656140 |
T |
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