View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2771_high_13 (Length: 216)
Name: NF2771_high_13
Description: NF2771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2771_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 25051461 - 25051660
Alignment:
| Q |
1 |
cgtttaataacagagttgactcgtattgccaaagtcaaacttaacttgcaatttttcaaataacttataactaaatttacaaaactatgaatgtgtagca |
100 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
25051461 |
cgtttaattacagagttgactcgtattgccaaagtcaaacttaacttgcaatttttcaaataacttataactaaatttacaaaactatgaatgcgtagca |
25051560 |
T |
|
| Q |
101 |
ggaacataatatgaatccatcacacattcatatttaagagacactaaagtctaaacacaaaataacaacgtaaaattggtcattgctttctataatctat |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25051561 |
ggaacacaatatgaatccatcacacattcatatttaagagacactaaagtctaaacacaaaataacaacgtaaaattggtcattgctttctataatctat |
25051660 |
T |
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