View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2771_high_4 (Length: 328)

Name: NF2771_high_4
Description: NF2771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2771_high_4
NF2771_high_4
[»] chr1 (53 HSPs)
chr1 (1-328)||(32359088-32359415)
chr1 (21-307)||(31117590-31117881)
chr1 (38-164)||(7274589-7274715)
chr1 (36-197)||(32602740-32602901)
chr1 (21-316)||(21516491-21516804)
chr1 (99-308)||(35272478-35272689)
chr1 (36-152)||(42747548-42747664)
chr1 (38-198)||(37131478-37131640)
chr1 (36-153)||(35058532-35058649)
chr1 (118-198)||(20004000-20004080)
chr1 (58-185)||(22593626-22593754)
chr1 (228-307)||(3160986-3161064)
chr1 (88-164)||(20791972-20792048)
chr1 (93-163)||(1415734-1415804)
chr1 (247-308)||(32348421-32348482)
chr1 (93-149)||(5951867-5951923)
chr1 (73-198)||(7583413-7583544)
chr1 (247-306)||(20791808-20791867)
chr1 (93-164)||(35926674-35926745)
chr1 (229-307)||(1714030-1714107)
chr1 (229-299)||(3949637-3949706)
chr1 (34-164)||(7097744-7097873)
chr1 (42-164)||(28736208-28736330)
chr1 (229-295)||(30173402-30173467)
chr1 (247-301)||(32602955-32603009)
chr1 (247-308)||(5923869-5923930)
chr1 (268-316)||(15801323-15801371)
chr1 (110-162)||(46315642-46315694)
chr1 (229-300)||(35058683-35058753)
chr1 (229-307)||(23908814-23908891)
chr1 (108-154)||(47326546-47326592)
chr1 (77-154)||(23805410-23805487)
chr1 (110-154)||(11823677-11823721)
chr1 (110-154)||(28314816-28314860)
chr1 (115-154)||(25365858-25365897)
chr1 (229-308)||(28870462-28870540)
chr1 (118-185)||(30418427-30418494)
chr1 (118-181)||(38322103-38322166)
chr1 (43-161)||(52596278-52596397)
chr1 (96-162)||(15188583-15188649)
chr1 (248-303)||(35926513-35926570)
chr1 (228-301)||(2774463-2774535)
chr1 (36-125)||(7781198-7781285)
chr1 (268-317)||(38321955-38322004)
chr1 (249-309)||(7460270-7460329)
chr1 (259-315)||(11611620-11611676)
chr1 (110-154)||(12014735-12014779)
chr1 (130-162)||(15942491-15942523)
chr1 (247-295)||(31795355-31795403)
chr1 (94-154)||(36021062-36021122)
chr1 (110-154)||(38624161-38624205)
chr1 (110-154)||(39325704-39325748)
chr1 (269-317)||(42747731-42747779)
[»] chr4 (51 HSPs)
chr4 (34-295)||(52831394-52831655)
chr4 (23-198)||(24418212-24418387)
chr4 (36-164)||(24474043-24474171)
chr4 (37-164)||(17425685-17425812)
chr4 (120-317)||(47789352-47789554)
chr4 (78-198)||(31736116-31736235)
chr4 (22-153)||(23051682-23051813)
chr4 (44-163)||(39276304-39276423)
chr4 (86-185)||(55723210-55723309)
chr4 (130-203)||(20988782-20988855)
chr4 (79-164)||(21501601-21501686)
chr4 (98-185)||(41963371-41963458)
chr4 (82-152)||(2733406-2733475)
chr4 (82-164)||(52986480-52986562)
chr4 (95-164)||(3535168-3535237)
chr4 (247-308)||(52327451-52327512)
chr4 (93-185)||(26552175-26552267)
chr4 (247-307)||(39276528-39276588)
chr4 (265-314)||(30070327-30070376)
chr4 (100-185)||(44555692-44555777)
chr4 (37-141)||(25885924-25886024)
chr4 (229-308)||(34812665-34812743)
chr4 (268-314)||(2103182-2103228)
chr4 (268-317)||(1162394-1162443)
chr4 (79-164)||(13615223-13615308)
chr4 (87-295)||(37713187-37713398)
chr4 (234-307)||(41173918-41173990)
chr4 (110-154)||(19801019-19801063)
chr4 (110-154)||(19801825-19801869)
chr4 (266-306)||(27611812-27611852)
chr4 (110-154)||(36181332-36181376)
chr4 (110-154)||(37114396-37114440)
chr4 (110-154)||(49335153-49335197)
chr4 (121-185)||(52327328-52327392)
chr4 (229-308)||(30802426-30802503)
chr4 (104-191)||(32474843-32474930)
chr4 (41-150)||(1162163-1162272)
chr4 (247-308)||(8130283-8130344)
chr4 (113-154)||(25687082-25687123)
chr4 (41-173)||(26026623-26026756)
chr4 (136-185)||(41758558-41758607)
chr4 (37-66)||(47789588-47789617)
chr4 (247-296)||(52986362-52986411)
chr4 (113-154)||(54683693-54683734)
chr4 (110-154)||(6287930-6287974)
chr4 (120-152)||(17896025-17896057)
chr4 (110-154)||(32012640-32012684)
chr4 (110-154)||(33984181-33984225)
chr4 (229-301)||(39033634-39033705)
chr4 (110-154)||(53284100-53284144)
chr4 (110-154)||(55001706-55001750)
[»] chr5 (50 HSPs)
chr5 (21-198)||(9004748-9004925)
chr5 (96-198)||(1621523-1621625)
chr5 (121-327)||(34640063-34640274)
chr5 (36-153)||(34639944-34640061)
chr5 (93-185)||(16869932-16870024)
chr5 (42-185)||(22028655-22028798)
chr5 (36-198)||(32882662-32882831)
chr5 (42-185)||(28363381-28363524)
chr5 (97-164)||(6462402-6462469)
chr5 (79-198)||(32826741-32826860)
chr5 (34-164)||(41892911-41893041)
chr5 (265-309)||(6462238-6462282)
chr5 (120-164)||(31812082-31812126)
chr5 (93-164)||(4283098-4283169)
chr5 (229-308)||(31806583-31806661)
chr5 (268-307)||(31812166-31812205)
chr5 (212-307)||(1015022-1015118)
chr5 (118-164)||(13838879-13838925)
chr5 (113-190)||(31677162-31677240)
chr5 (54-164)||(34639744-34639854)
chr5 (234-307)||(31677297-31677369)
chr5 (247-327)||(2942084-2942164)
chr5 (110-154)||(6789576-6789620)
chr5 (110-154)||(15498738-15498782)
chr5 (110-162)||(16218262-16218314)
chr5 (110-154)||(24171458-24171502)
chr5 (110-154)||(29525283-29525327)
chr5 (110-154)||(36761155-36761199)
chr5 (110-154)||(37530707-37530751)
chr5 (110-154)||(41734231-41734275)
chr5 (110-154)||(42422902-42422946)
chr5 (110-154)||(42709404-42709448)
chr5 (42-185)||(2941874-2942016)
chr5 (120-159)||(11863386-11863425)
chr5 (114-173)||(15120889-15120948)
chr5 (234-300)||(1621415-1621480)
chr5 (110-152)||(13359445-13359487)
chr5 (94-164)||(17259450-17259520)
chr5 (247-301)||(41892767-41892821)
chr5 (246-307)||(5390445-5390506)
chr5 (248-301)||(17259623-17259676)
chr5 (247-308)||(17902803-17902864)
chr5 (110-154)||(10815156-10815200)
chr5 (36-68)||(11653834-11653866)
chr5 (110-154)||(12280874-12280918)
chr5 (110-154)||(12939844-12939888)
chr5 (110-154)||(12953794-12953838)
chr5 (38-106)||(18336380-18336447)
chr5 (110-154)||(23590732-23590776)
chr5 (97-185)||(34590181-34590269)
[»] chr3 (44 HSPs)
chr3 (36-309)||(37334436-37334709)
chr3 (36-203)||(32645687-32645853)
chr3 (54-164)||(43822487-43822597)
chr3 (42-185)||(37083794-37083938)
chr3 (60-198)||(32326120-32326258)
chr3 (60-164)||(9198195-9198299)
chr3 (38-164)||(38684772-38684898)
chr3 (110-185)||(32117833-32117908)
chr3 (99-198)||(32582458-32582557)
chr3 (99-154)||(44539130-44539185)
chr3 (79-164)||(32109499-32109584)
chr3 (247-317)||(9780476-9780546)
chr3 (118-184)||(20873186-20873252)
chr3 (110-163)||(8879457-8879510)
chr3 (110-154)||(12122843-12122887)
chr3 (249-308)||(32645888-32645947)
chr3 (267-314)||(35696646-35696693)
chr3 (128-198)||(2948883-2948953)
chr3 (79-164)||(1384162-1384247)
chr3 (250-327)||(32325981-32326058)
chr3 (248-317)||(32582611-32582679)
chr3 (113-198)||(33674505-33674589)
chr3 (110-154)||(2557864-2557908)
chr3 (247-315)||(33674383-33674451)
chr3 (110-154)||(34435937-34435981)
chr3 (110-154)||(41991646-41991690)
chr3 (110-154)||(54463418-54463462)
chr3 (113-152)||(9558824-9558863)
chr3 (113-164)||(11041987-11042038)
chr3 (94-153)||(13800054-13800113)
chr3 (110-153)||(36237929-36237972)
chr3 (266-301)||(45021349-45021384)
chr3 (247-314)||(50882422-50882489)
chr3 (115-154)||(55226393-55226432)
chr3 (156-198)||(13799995-13800037)
chr3 (249-307)||(20873056-20873114)
chr3 (113-154)||(12764767-12764808)
chr3 (247-308)||(18084870-18084930)
chr3 (247-308)||(32117975-32118036)
chr3 (36-125)||(44947255-44947342)
chr3 (110-154)||(30317906-30317950)
chr3 (247-307)||(35682656-35682716)
chr3 (100-164)||(36879054-36879118)
chr3 (110-154)||(52184789-52184833)
[»] chr2 (43 HSPs)
chr2 (1-185)||(40909819-40910003)
chr2 (1-185)||(44984320-44984504)
chr2 (87-164)||(31062936-31063013)
chr2 (97-317)||(42139387-42139610)
chr2 (96-153)||(12238594-12238651)
chr2 (97-185)||(44810061-44810149)
chr2 (93-164)||(27679071-27679142)
chr2 (268-317)||(15804508-15804557)
chr2 (212-327)||(44984167-44984287)
chr2 (229-301)||(27863868-27863939)
chr2 (130-185)||(15804440-15804495)
chr2 (42-164)||(44809871-44809992)
chr2 (216-327)||(40910036-40910152)
chr2 (131-202)||(42034452-42034523)
chr2 (248-314)||(30804361-30804427)
chr2 (110-154)||(1875995-1876039)
chr2 (110-154)||(7454625-7454669)
chr2 (110-154)||(8875766-8875810)
chr2 (110-154)||(12160876-12160920)
chr2 (110-154)||(14958213-14958257)
chr2 (110-154)||(34245339-34245383)
chr2 (110-154)||(38324331-38324375)
chr2 (93-160)||(35189302-35189369)
chr2 (110-153)||(42519807-42519850)
chr2 (250-308)||(2346854-2346912)
chr2 (229-315)||(8752607-8752691)
chr2 (212-317)||(31063077-31063184)
chr2 (272-317)||(5946409-5946454)
chr2 (117-190)||(10911593-10911666)
chr2 (234-291)||(15967967-15968023)
chr2 (252-305)||(33625708-33625761)
chr2 (62-151)||(38808956-38809045)
chr2 (269-309)||(4549031-4549071)
chr2 (229-308)||(5505703-5505780)
chr2 (110-154)||(5774186-5774230)
chr2 (110-154)||(16496578-16496622)
chr2 (229-301)||(27679229-27679299)
chr2 (110-154)||(30523702-30523746)
chr2 (268-316)||(35442772-35442820)
chr2 (110-154)||(36936035-36936079)
chr2 (110-154)||(39241123-39241167)
chr2 (110-154)||(44525949-44525993)
chr2 (248-308)||(44810218-44810277)
[»] chr8 (47 HSPs)
chr8 (36-171)||(28444776-28444911)
chr8 (36-164)||(41470027-41470155)
chr8 (228-308)||(43408671-43408750)
chr8 (42-153)||(38288897-38289008)
chr8 (79-188)||(13895934-13896050)
chr8 (228-308)||(2111012-2111091)
chr8 (60-164)||(18892296-18892400)
chr8 (53-177)||(25019620-25019744)
chr8 (113-164)||(37740624-37740675)
chr8 (247-301)||(12524602-12524656)
chr8 (38-164)||(14243110-14243236)
chr8 (254-327)||(21367061-21367133)
chr8 (229-314)||(35764723-35764807)
chr8 (86-150)||(13544129-13544193)
chr8 (86-150)||(13680280-13680344)
chr8 (96-164)||(32467773-32467840)
chr8 (36-164)||(43408488-43408615)
chr8 (229-308)||(28947309-28947387)
chr8 (247-308)||(925997-926058)
chr8 (96-185)||(3346223-3346312)
chr8 (158-203)||(12525138-12525183)
chr8 (110-154)||(14911858-14911902)
chr8 (110-154)||(25100177-25100221)
chr8 (110-154)||(25100339-25100383)
chr8 (113-153)||(35057264-35057304)
chr8 (110-154)||(36859321-36859365)
chr8 (247-307)||(37740763-37740823)
chr8 (110-154)||(40529594-40529638)
chr8 (110-154)||(43800731-43800775)
chr8 (97-164)||(24523835-24523902)
chr8 (93-164)||(27316672-27316743)
chr8 (253-308)||(28444672-28444727)
chr8 (268-307)||(29861519-29861558)
chr8 (118-160)||(2595231-2595273)
chr8 (36-154)||(14354543-14354661)
chr8 (118-164)||(29512807-29512852)
chr8 (229-282)||(8407585-8407637)
chr8 (247-292)||(13544014-13544059)
chr8 (247-292)||(13680414-13680459)
chr8 (36-125)||(13969985-13970072)
chr8 (247-308)||(33583892-33583953)
chr8 (96-153)||(35764593-35764650)
chr8 (247-307)||(3346102-3346162)
chr8 (110-154)||(20697468-20697512)
chr8 (101-185)||(29861347-29861430)
chr8 (117-185)||(36049660-36049728)
chr8 (110-154)||(45237755-45237799)
[»] scaffold0040 (1 HSPs)
scaffold0040 (60-198)||(49873-50011)
[»] chr7 (49 HSPs)
chr7 (31-280)||(883677-883930)
chr7 (31-280)||(1243006-1243259)
chr7 (36-197)||(3836882-3837046)
chr7 (72-160)||(25659420-25659508)
chr7 (47-174)||(28175581-28175708)
chr7 (42-152)||(18654709-18654819)
chr7 (247-308)||(2525304-2525365)
chr7 (96-152)||(44235513-44235569)
chr7 (42-153)||(18654096-18654206)
chr7 (247-316)||(44235297-44235366)
chr7 (216-297)||(30046441-30046523)
chr7 (110-152)||(44818814-44818856)
chr7 (247-316)||(7379568-7379636)
chr7 (275-316)||(42967964-42968005)
chr7 (130-190)||(87266-87326)
chr7 (117-185)||(2525172-2525239)
chr7 (247-291)||(3837099-3837143)
chr7 (36-140)||(12473526-12473630)
chr7 (93-185)||(15050826-15050918)
chr7 (229-297)||(19683450-19683517)
chr7 (110-154)||(27826802-27826846)
chr7 (110-154)||(29994178-29994222)
chr7 (110-154)||(42328985-42329029)
chr7 (115-175)||(42967762-42967822)
chr7 (110-154)||(46672599-46672643)
chr7 (82-153)||(34838459-34838530)
chr7 (249-308)||(37869119-37869178)
chr7 (250-304)||(15050986-15051040)
chr7 (247-313)||(43911088-43911154)
chr7 (113-154)||(25696129-25696170)
chr7 (94-159)||(30046310-30046374)
chr7 (247-316)||(31740598-31740666)
chr7 (113-154)||(46349846-46349887)
chr7 (114-154)||(4060449-4060489)
chr7 (122-190)||(13438420-13438488)
chr7 (93-153)||(15568751-15568811)
chr7 (81-125)||(19087268-19087312)
chr7 (36-104)||(24580971-24581039)
chr7 (251-327)||(28175415-28175491)
chr7 (110-154)||(28494238-28494282)
chr7 (110-154)||(28958084-28958128)
chr7 (110-154)||(31031856-31031900)
chr7 (118-154)||(33982277-33982313)
chr7 (110-150)||(42265239-42265279)
chr7 (110-154)||(42328126-42328170)
chr7 (118-154)||(43544858-43544894)
chr7 (110-154)||(46350798-46350842)
chr7 (110-154)||(46536215-46536259)
chr7 (110-154)||(46615641-46615685)
[»] scaffold0010 (2 HSPs)
scaffold0010 (234-307)||(166742-166814)
scaffold0010 (93-185)||(166590-166680)
[»] chr6 (22 HSPs)
chr6 (36-185)||(5976572-5976720)
chr6 (84-295)||(1288292-1288501)
chr6 (212-308)||(29052677-29052773)
chr6 (255-307)||(9749801-9749853)
chr6 (93-163)||(3341104-3341174)
chr6 (128-185)||(27903901-27903958)
chr6 (247-295)||(724719-724767)
chr6 (129-185)||(9197214-9197270)
chr6 (110-154)||(12130574-12130618)
chr6 (113-197)||(17328693-17328777)
chr6 (110-154)||(21860327-21860371)
chr6 (110-154)||(24119201-24119245)
chr6 (130-185)||(724597-724652)
chr6 (229-296)||(8014427-8014493)
chr6 (110-153)||(25023418-25023461)
chr6 (167-202)||(33757725-33757760)
chr6 (229-308)||(34544422-34544500)
chr6 (100-154)||(16800436-16800490)
chr6 (96-154)||(17071804-17071862)
chr6 (110-152)||(20992229-20992271)
chr6 (212-301)||(5976750-5976842)
chr6 (110-154)||(20645751-20645795)
[»] scaffold0004 (2 HSPs)
scaffold0004 (117-198)||(339001-339081)
scaffold0004 (247-302)||(338912-338967)
[»] scaffold0330 (1 HSPs)
scaffold0330 (110-154)||(7084-7128)
[»] scaffold0022 (1 HSPs)
scaffold0022 (249-307)||(84838-84896)
[»] scaffold0325 (1 HSPs)
scaffold0325 (110-154)||(18469-18513)


Alignment Details
Target: chr1 (Bit Score: 275; Significance: 1e-154; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 32359088 - 32359415
Alignment:
Q  1 gtctgtttagtgagacgtggatttgagctaatggtttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagct 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32359088 gtctgtttggtgagacgtggatttgagctaatggtttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagct 32359187  T
Q  101 tatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatcttga 200  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  32359188 tatagcttattttcatgagcttacagcgatttttgataagctaattcaagtaacctatagcttagcactttttatctcaattttatccctacaatcttaa 32359287  T
Q  201 ttagnnnnnnntattaattaaatgcacattttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagct 300  Q
    ||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32359288 ttagaaaaaaatattaattaaatgcacattttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagct 32359387  T
Q  301 agcttatctactatcagaaataagctac 328  Q
    || |||||| ||||||| ||||||||||    
T  32359388 agtttatctgctatcagcaataagctac 32359415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 21 - 307
Target Start/End: Complemental strand, 31117881 - 31117590
Alignment:
Q  21 atttgagctaatggtttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagct--tatagcttattttcatga 118  Q
    ||||||||| |||| |||| |||||||| ||||||||| | ||||||| | |||| | || |||||||||  ||| || |  |||| |||| ||| ||||    
T  31117881 atttgagcttatggcttattgcttataatctcgtatgactgaaaaagacctgtttggtaattgtcattttctcacaagttaatataacttaattttatga 31117782  T
Q  119 gcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatcttgatt---agnnnnnnntatt 215  Q
    |||||||||  ||||||||||| ||||||||||||| |||||| || || ||||||||||||||||| |||||||||||| |||   |        ||||    
T  31117781 gcttatagctttttttgataagataattcaagtagcttatagcctatcaatttttatctcaattttacccctacaatcttaattgaaaaaaataaatatt 31117682  T
Q  216 aattaaatgcaca-ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttat 307  Q
    ||||||||  ||| ||||||||||||||||  |||||| |||| ||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  31117681 aattaaatatacatttttttgtcatttcat-atttatatgctatttcaatcgctaattttatcaaacactacaaattcaatcagctagcttat 31117590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 38 - 164
Target Start/End: Original strand, 7274589 - 7274715
Alignment:
Q  38 atagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgat 137  Q
    |||||||||||||||||||||||||||||||   |||||  |||| ||||||||| ||||||||||| |||||||||||||||| |||| ||  | ||||    
T  7274589 atagcttataagctcgtatgattaaaaaagacttgtttcataactatcatttttaaacgagcttataacttattttcatgagctcatagtggcctctgat 7274688  T
Q  138 aagctaattcaagtagcctatagctta 164  Q
    ||||||||||||||||  |||||||||    
T  7274689 aagctaattcaagtagtttatagctta 7274715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 36 - 197
Target Start/End: Original strand, 32602740 - 32602901
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg 135  Q
    ||||| |||||||| |  ||||||||||||||||  ||||   |||| ||| |||||||||||||||||| ||||||||||| | |||||  ||| ||||    
T  32602740 ttataacttataagtttatatgattaaaaaagatttgtttgctaactatcagttttacacgagcttatagtttattttcatgtgtttataaaggtatttg 32602839  T
Q  136 ataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatct 197  Q
    |||||||||||||| |||| ||||||||| || |||||||||  |||||| |||||||||||    
T  32602840 ataagctaattcaaatagcttatagcttatcaatttttatcttcattttacccctacaatct 32602901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 316
Target Start/End: Complemental strand, 21516804 - 21516491
Alignment:
Q  21 atttgagctaatggtttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagc 120  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||   |||| | || |||||||||| |||||||||||| |||| ||| ||||||    
T  21516804 atttgagcttatggcttatagcttataagctcgtatgactaaaaaagacatgtttggtaattgtcattttttcacgagcttataacttaatttgatgagc 21516705  T
Q  121 ttatagcggtttttgataagctaattcaagtagcctatagctta---------------gcactttttatctcaattttatccctacaatcttgattagn 205  Q
    |||||||| |||||  ||||| || ||||||| | |||||||||                ||||| |||||||||||||| |||||||||||| ||| |     
T  21516704 ttatagcgttttttattaagcaaaatcaagtatcttatagcttaaagtttatagctttgtcacttcttatctcaattttacccctacaatcttaatt-ga 21516606  T
Q  206 nnnnnntattaattaaatgcacattttt-----tgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagct 300  Q
          | ||||||||||  || |||||     |||||||||||  |||| |||||| ||||| | ||||||||||||||||  ||||||||||||||||    
T  21516605 ttttttttttaattaaatatacctttttttctatgtcatttcat-atttaaaagctatttcaaccactaattttaccaaacacaacaaattcaatcagct 21516507  T
Q  301 agcttatctactatca 316  Q
    |||||||| |||||||    
T  21516506 agcttatccactatca 21516491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 308
Target Start/End: Complemental strand, 35272689 - 35272478
Alignment:
Q  99 cttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatctt 198  Q
    ||||||||||||||| |||||||||||||   ||||||||||||||||| |||||| ||| |||||  |||||| |||||||||||| || | |||||||    
T  35272689 cttatagcttatttttatgagcttatagcttgttttgataagctaattccagtagcttatggcttataactttt-atctcaattttacccatgcaatctt 35272591  T
Q  199 gatt--agnnnnnnntattaattaaatgcacattt-tttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaat 295  Q
     ||   |        ||||||||||||  || ||| ||||||||||||| |||| |||| |||||||| || ||||||||| ||||| ||||||||||||    
T  35272590 aatcgaaaaaataaatattaattaaatatacctttatttgtcatttcatattttttaagatacttcaaccgataattttactaaacactacaaattcaat 35272491  T
Q  296 cagctagcttatc 308  Q
    |||||||||||||    
T  35272490 cagctagcttatc 35272478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 42747548 - 42747664
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg 135  Q
    ||||||||||||||||||||||||||||| ||| || ||  | |||||||||||   ||| ||||||||||||| ||| |||||||||||| | |||||     
T  42747548 ttatagcttataagctcgtatgattaaaatagacccattaagtaactgtcatttactcacaagcttatagcttaattttatgagcttatagtgttttttt 42747647  T
Q  136 ataagctaattcaagta 152  Q
    |||||||||||||||||    
T  42747648 ataagctaattcaagta 42747664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 37131640 - 37131478
Alignment:
Q  38 atagcttataagctcgtatgatt--aaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg 135  Q
    |||||||||||| ||||||||||  |||||||| |||||| | | || ||||  | ||||||||||| | ||||||||||||| |||| | | | |||||    
T  37131640 atagcttataagttcgtatgattttaaaaaagacccgtttggtagctatcataatcacacgagcttagaccttattttcatgaacttacaacagcttttg 37131541  T
Q  136 ataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatctt 198  Q
    ||||||||||||||||||| ||||||||| ||||||| | ||  |||||| | ||||||||||    
T  37131540 ataagctaattcaagtagcttatagcttatcacttttcaacttgattttaccactacaatctt 37131478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 35058532 - 35058649
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg 135  Q
    ||||| ||||||||||||||||| |||| | || |||||| | ||| |||||||   ||||||||||||||||||||| | | ||||||||||||||||     
T  35058532 ttataacttataagctcgtatgactaaagatgacccgtttggtaacagtcatttgctcacgagcttatagcttatttttacgggcttatagcggttttta 35058631  T
Q  136 ataagctaattcaagtag 153  Q
     |||||||||||||||||    
T  35058632 gtaagctaattcaagtag 35058649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 20004000 - 20004080
Alignment:
Q  118 agcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatctt 198  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||  ||| |||||||    
T  20004000 agcttatagcgttttttgataagctaattcaagtagcttatagcttatcaccttttatctcgattttactcctgcaatctt 20004080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 22593754 - 22593626
Alignment:
Q  58 attaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggttttt-gataagctaattcaagtagcct 156  Q
    ||||||||||| | |||| | ||| |||| |||  ||||||| | ||||||||||| || |||||||||| |||||| |||||||||||||||||||| |    
T  22593754 attaaaaaagaccagtttggtaaccgtcactttctcacgagcctgtagcttatttttatcagcttatagcagtttttcgataagctaattcaagtagctt 22593655  T
Q  157 atagcttagcactttttatctcaatttta 185  Q
    |||||||| || ||||||||  |||||||    
T  22593654 atagcttatcattttttatcctaatttta 22593626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 307
Target Start/End: Original strand, 3160986 - 3161064
Alignment:
Q  228 attttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttat 307  Q
    ||||| ||||||||||| ||| ||| |||| |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  3160986 attttatgtcatttcatattt-atatgctagttcaaacgttaattttaccaaacactacaaattcaatcagctagcttat 3161064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 20792048 - 20791972
Alignment:
Q  88 ttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    |||||||||| |||| | |||||||| ||||| | |||| ||||||||||||||||||||||||||| |||||||||    
T  20792048 ttttacacgaccttacatcttatttttatgagttcatagtggtttttgataagctaattcaagtagcttatagctta 20791972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 1415734 - 1415804
Alignment:
Q  93 cacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctt 163  Q
    ||||||||||||||||||||| || |  |||||||| ||||||||||||||||||||||||| | ||||||    
T  1415734 cacgagcttatagcttatttttattaatttatagcgttttttgataagctaattcaagtagcttgtagctt 1415804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 32348421 - 32348482
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    |||||||||||  |||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  32348421 tttataagctagctcaaccgctaattttaccaaacactacaaattcaatcaactagcttatc 32348482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 5951923 - 5951867
Alignment:
Q  93 cacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaa 149  Q
    ||||| ||||||||||||||| ||||||||||||||||||  |||||||||||||||    
T  5951923 cacgatcttatagcttatttttatgagcttatagcggtttgagataagctaattcaa 5951867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 198
Target Start/End: Original strand, 7583413 - 7583544
Alignment:
Q  73 tttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagt------agcctatagcttagc 166  Q
    ||||| ||||||||||||  ||||||||||||| ||||||| |||||||||| | | | |||||||||  | |||||||      ||| |||| |||  |    
T  7583413 tttcgtaactgtcattttctcacgagcttatagtttatttttatgagcttattgtgttatttgataagtaagttcaagtagcttaagcttataacttttc 7583512  T
Q  167 actttttatctcaattttatccctacaatctt 198  Q
    |||||||||||||||||||||||| |||||||    
T  7583513 actttttatctcaattttatccctgcaatctt 7583544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 20791867 - 20791808
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagctta 306  Q
    ||||||||||||||||| ||| |||||||||||||| |||||||||| | ||||||||||    
T  20791867 tttataagctacttcaatcgccaattttaccaaacactacaaattcagttagctagctta 20791808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 35926745 - 35926674
Alignment:
Q  93 cacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    ||||||||||||||||||||| |  ||||| ||| | ||||||||||||| ||||||||||| |||||||||    
T  35926745 cacgagcttatagcttatttttactagcttgtagtgttttttgataagctgattcaagtagcttatagctta 35926674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 307
Target Start/End: Complemental strand, 1714107 - 1714030
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttat 307  Q
    |||| ||||||||||| ||| |||| |||||||||  | ||||||||||||||| ||||||||||||||| ||||||||    
T  1714107 ttttatgtcatttcatattt-ataaactacttcaacggttaattttaccaaacactacaaattcaatcagttagcttat 1714030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 3949706 - 3949637
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagc 299  Q
    |||| ||||||||||| ||| ||||  || |||||||||||||||||||||||| ||||||||||||||||    
T  3949706 ttttatgtcatttcatattt-ataaattagttcaaacgctaattttaccaaacactacaaattcaatcagc 3949637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 7097873 - 7097744
Alignment:
Q  34 gtttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttt 133  Q
    ||||||||||||||| || |||| |||||||| ||| | ||| | |||| |||||||  || |||||||||| ||||||| ||||||||||     ||||    
T  7097873 gtttatagcttataaacttgtatcattaaaaacgattcatttggtaactatcattttctcatgagcttataggttatttt-atgagcttatgattatttt 7097775  T
Q  134 tgataagctaattcaagtagcctatagctta 164  Q
    | ||||||||||||||||| | |||||||||    
T  7097774 taataagctaattcaagtatcttatagctta 7097744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 164
Target Start/End: Complemental strand, 28736330 - 28736208
Alignment:
Q  42 cttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagc 141  Q
    ||||||||||| | ||| ||||||||| | |  | | ||| ||||||||| ||| |||||| |||||||||| |  | ||||||||  |||| |||||||    
T  28736330 cttataagctcatttgactaaaaaagaccagcctggtaaccgtcattttttcacaagcttacagcttatttttaccaacttatagcatttttagataagc 28736231  T
Q  142 taattcaagtagcctatagctta 164  Q
    ||||||||||||| |||||||||    
T  28736230 taattcaagtagcgtatagctta 28736208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 295
Target Start/End: Complemental strand, 30173467 - 30173402
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaat 295  Q
    |||| ||||||||||| ||| |||| ||||||||| ||||||||||| |||||||||||||||||||    
T  30173467 ttttatgtcatttcatattt-ataaactacttcaaccgctaattttaacaaacattacaaattcaat 30173402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 32602955 - 32603009
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagcta 301  Q
    ||||||||||||||||| | |||||||||| ||||| ||||||||||||||||||    
T  32602955 tttataagctacttcaaccactaattttactaaacactacaaattcaatcagcta 32603009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 5923869 - 5923930
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    ||||||||||| ||||| |  ||||||||||||||| || ||||||||||||||||||||||    
T  5923869 tttataagctagttcaaccattaattttaccaaacactaaaaattcaatcagctagcttatc 5923930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 268 - 316
Target Start/End: Original strand, 15801323 - 15801371
Alignment:
Q  268 taattttaccaaacattacaaattcaatcagctagcttatctactatca 316  Q
    ||||||||||||||||| |||||||||||||||| |||||| |||||||    
T  15801323 taattttaccaaacattgcaaattcaatcagctaacttatccactatca 15801371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 46315694 - 46315642
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagcctatagct 162  Q
    |||||||||||||||| || |||||||||||||| |||||||||| |||||||    
T  46315694 ttttcatgagcttataacgttttttgataagctatttcaagtagcttatagct 46315642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 35058683 - 35058753
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagct 300  Q
    |||| ||||||||||| ||| ||||| || ||||| |||||||||||||||||| |||||||| ||||||||    
T  35058683 ttttatgtcatttcatattt-ataaggtagttcaaccgctaattttaccaaacactacaaatttaatcagct 35058753  T

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Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 307
Target Start/End: Complemental strand, 23908891 - 23908814
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttat 307  Q
    |||| ||||||||||| ||| |||||||| ||||| | ||||||| |||||||||||||||||| ||| | ||||||||    
T  23908891 ttttatgtcatttcatattt-ataagctagttcaaccactaatttcaccaaacattacaaattcgatcggttagcttat 23908814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 47326592 - 47326546
Alignment:
Q  108 tattttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||||    
T  47326592 tattttcatgagcttatagcgttttttgaaaagctatttcaagtagc 47326546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 23805410 - 23805487
Alignment:
Q  77 gcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||| |||||||||||| ||||| |||||||| |||||||||||   |||||| | ||| | |||||||||||    
T  23805410 gcaactgtcgtttttacacgagattataacttatttttatgagcttataatagtttttcagaagatgattcaagtagc 23805487  T

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Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 11823677 - 11823721
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  11823677 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 11823721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 28314860 - 28314816
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  28314860 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 28314816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 25365858 - 25365897
Alignment:
Q  115 atgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  25365858 atgagcttatagcgttttttgaaaagctaattcaagtagc 25365897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 308
Target Start/End: Complemental strand, 28870540 - 28870462
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    |||| ||| ||||||| |||||||||||| |||||  | ||||||||||||||| || ||||||||| | ||||||||||    
T  28870540 ttttatgtaatttcat-ttttataagctagttcaactgttaattttaccaaacactaaaaattcaataaactagcttatc 28870462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 30418427 - 30418494
Alignment:
Q  118 agcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||| ||||| |||| |||||| |||| |||||||| ||||||| | || |||||||||||||||||    
T  30418427 agcttgtagcgtttttggataagttaatccaagtagcttatagctaatcattttttatctcaatttta 30418494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 38322166 - 38322103
Alignment:
Q  118 agcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaat 181  Q
    ||||||| ||| |||||||||||| | |||||||||| ||||||||| || ||||| |||||||    
T  38322166 agcttattgcgttttttgataagccacttcaagtagcttatagcttatcaatttttttctcaat 38322103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 161
Target Start/End: Complemental strand, 52596397 - 52596278
Alignment:
Q  43 ttataagctcgtatgattaaaaaa-gatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagc 141  Q
    |||||||||| | ||||||||||| || | |||| | ||| ||||||||  || || ||  ||||||||||| |  |||||| ||||||||||||| |||    
T  52596397 ttataagctcatttgattaaaaaaagacctgtttggtaaccgtcattttctcaggaactattagcttatttttactagcttaaagcggtttttgatgagc 52596298  T
Q  142 taattcaagtagcctatagc 161  Q
    | ||||||||||| ||||||    
T  52596297 tgattcaagtagcttatagc 52596278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 15188649 - 15188583
Alignment:
Q  96 gagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagct 162  Q
    ||||| |||||||||||| || ||||||||||  || ||||  |||||||||||||||| |||||||    
T  15188649 gagctaatagcttatttttataagcttatagcatttcttgacgagctaattcaagtagcttatagct 15188583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 303
Target Start/End: Complemental strand, 35926570 - 35926513
Alignment:
Q  248 ttataagctacttcaaacgctaattttaccaaaca--ttacaaattcaatcagctagc 303  Q
    |||||||||| ||||| | ||||||||||||||||   ||||||||||||||||||||    
T  35926570 ttataagctagttcaaccactaattttaccaaacactgtacaaattcaatcagctagc 35926513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 2774463 - 2774535
Alignment:
Q  228 attttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagcta 301  Q
    ||||| ||||||||||| ||| |||||  | ||| | ||||||||||||| ||||||||| |||||||||||||    
T  2774463 attttatgtcatttcatgttt-ataagtcaattcgatcgctaattttacctaacattacatattcaatcagcta 2774535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 7781285 - 7781198
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttata 125  Q
    ||||||||||||||||||| |||| ||||||| || |||| |  |||||| |||   ||||||||||||||||| ||||| |||||||||    
T  7781285 ttatagcttataagctcgtttgataaaaaaagctctgttt-ggtactgtcttttcaccacgagcttatagctta-tttcacgagcttata 7781198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 317
Target Start/End: Complemental strand, 38322004 - 38321955
Alignment:
Q  268 taattttaccaaacattacaaattcaatcagctagcttatctactatcag 317  Q
    ||||||||||||||| ||||||||||| || |||| ||||| ||||||||    
T  38322004 taattttaccaaacactacaaattcaaacaactagtttatccactatcag 38321955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 309
Target Start/End: Original strand, 7460270 - 7460329
Alignment:
Q  249 tataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatct 309  Q
    ||||||||| || || |||||| ||||| ||||| |||||||||||||| |||||||||||    
T  7460270 tataagctagtttaaccgctaagtttac-aaacactacaaattcaatcatctagcttatct 7460329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 11611676 - 11611620
Alignment:
Q  259 ttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctactatc 315  Q
    ||||| |||||||||||||||||| | ||||||||||||| | || |||| ||||||    
T  11611676 ttcaaccgctaattttaccaaacacttcaaattcaatcagatggcatatcaactatc 11611620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 12014735 - 12014779
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| |||| |||||    
T  12014735 ttttcatgagcttatagcgttttttgaaaagctatttcaggtagc 12014779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 15942523 - 15942491
Alignment:
Q  130 tttttgataagctaattcaagtagcctatagct 162  Q
    ||||||||||||||||||||||||| |||||||    
T  15942523 tttttgataagctaattcaagtagcttatagct 15942491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 31795403 - 31795355
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaat 295  Q
    ||||||||||| ||||| || || |||||||||||| ||||||||||||    
T  31795403 tttataagctagttcaaccgttagttttaccaaacactacaaattcaat 31795355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 36021062 - 36021122
Alignment:
Q  94 acgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||||||||||||||||||| |  |||||||| |   ||||||||||||||||||| ||||    
T  36021062 acgagcttatagcttatttttactagcttataacttattttgataagctaattcaattagc 36021122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 38624161 - 38624205
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||  ||||||| |||||| ||||||||||    
T  38624161 ttttcatgagcttatagctttttttgaaaagctatttcaagtagc 38624205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 39325704 - 39325748
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| ||||||  |||||||||    
T  39325704 ttttcatgagcttatagcgttttttgaaaagctatatcaagtagc 39325748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 317
Target Start/End: Original strand, 42747731 - 42747779
Alignment:
Q  269 aattttaccaaacattacaaattcaatcagctagcttatctactatcag 317  Q
    |||||||||||||| |||||||||||| | ||||||||||  |||||||    
T  42747731 aattttaccaaacactacaaattcaattaactagcttatcctctatcag 42747779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 34 - 295
Target Start/End: Original strand, 52831394 - 52831655
Alignment:
Q  34 gtttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttt 133  Q
    ||||||||||||||||||| ||||||||||||| |   |||| | ||| ||||||||||||||||||| |||||||||||||||||||||||  ||||||    
T  52831394 gtttatagcttataagctcatatgattaaaaaaaacttgtttggtaacggtcatttttacacgagcttgtagcttattttcatgagcttataaaggtttt 52831493  T
Q  134 tgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatcttgattagnnnnnnntattaattaaatgcacattttt 233  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||||||| | |||| ||||||| ||| |        |||||||||||||||||||||    
T  52831494 tgataagctaattcaagtagcttatagcttatcattttttatctcaatttgacccctgcaatcttaatt-ggaaaaaaaattaattaaatgcacattttt 52831592  T
Q  234 --tgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaat 295  Q
      || ||||||||  ||||||||||||||||| |||| |||||||| |||  ||||||||||||    
T  52831593 tatgccatttcat-atttataagctacttcaatcgctgattttaccgaactctacaaattcaat 52831655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 23 - 198
Target Start/End: Complemental strand, 24418387 - 24418212
Alignment:
Q  23 ttgagctaatggtttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagctt 122  Q
    ||||||| |||| ||||| ||||| ||||| ||||||||||| ||| | ||||   || |||||||||||||| |||||||| ||||||||| |||||||    
T  24418387 ttgagcttatggcttataccttatcagctcatatgattaaaagagacctgtttgctaattgtcatttttacacaagcttatatcttattttcttgagctt 24418288  T
Q  123 atagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatctt 198  Q
    |||||||||||||||||||||||||||||||| ||||||||| || |||||||||  |||||| |||| |||||||    
T  24418287 atagcggtttttgataagctaattcaagtagcttatagcttatcattttttatctttattttacccctgcaatctt 24418212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 164
Target Start/End: Original strand, 24474043 - 24474171
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg 135  Q
    ||||||||||||||||| ||||||||||||||| | |||| |||| | |||  ||| |||| ||||||| |||||||||||||| ||||||||||||||     
T  24474043 ttatagcttataagctcatatgattaaaaaagacctgtttggcaattatcagctttgcacgggcttatatcttattttcatgagtttatagcggtttttt 24474142  T
Q  136 ataagctaattcaagtagcctatagctta 164  Q
    ||||||||||||||||||| |||||||||    
T  24474143 ataagctaattcaagtagcttatagctta 24474171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 37 - 164
Target Start/End: Complemental strand, 17425812 - 17425685
Alignment:
Q  37 tatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttga 136  Q
    |||| |||| |||| ||||||||||||||| |   |||| | ||||| |||||| ||||||||||||||| ||||||| |||||||||||||||| || |    
T  17425812 tatatcttaaaagcccgtatgattaaaaaatacttgtttggtaactgccattttaacacgagcttatagcgtattttcttgagcttatagcggttattaa 17425713  T
Q  137 taagctaattcaagtagcctatagctta 164  Q
    |||||||| |||||||||||||||||||    
T  17425712 taagctaactcaagtagcctatagctta 17425685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 317
Target Start/End: Complemental strand, 47789554 - 47789352
Alignment:
Q  120 cttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatcttgatt---agnnnnnnntatta 216  Q
    |||||||||||||| |||||||||||||||||||| ||||||||| |||| |||||||| |||| | |||| ||||||| |||   ||       |||||    
T  47789554 cttatagcggttttcgataagctaattcaagtagcttatagcttatcactatttatctccatttaacccctgcaatcttaattgaaagaaataaatatta 47789455  T
Q  217 attaaatgcac---attttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctacta 313  Q
    |||||||||||   |||||  |||||||| |  |||| |||| ||||||| |||||||||||||||||| |||||| |||||||| |||||||||  |||    
T  47789454 attaaatgcacaatattttaggtcatttcgt-atttagaagcaacttcaaccgctaattttaccaaacactacaaaatcaatcagttagcttatccgcta 47789356  T
Q  314 tcag 317  Q
    ||||    
T  47789355 tcag 47789352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 198
Target Start/End: Complemental strand, 31736235 - 31736116
Alignment:
Q  78 caactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatct 177  Q
    ||||| ||||| |||||| | |||||| |||||||||||||||||||| || ||||| ||||||||||||||||||  |||||||||  | |||||||||    
T  31736235 caactatcattgttacacaaacttataacttattttcatgagcttataacgattttttataagctaattcaagtagtttatagcttataattttttatct 31736136  T
Q  178 caattttatccctacaatctt 198  Q
     ||||||| |||| |||||||    
T  31736135 aaatttta-ccctccaatctt 31736116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 23051813 - 23051682
Alignment:
Q  22 tttgagctaatggtttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagct 121  Q
    |||||||| || ||||||  ||||||||| | | ||| |||||| || | |||| | ||| |||| |||  |||||||||| |||||||||| ||||| |    
T  23051813 tttgagcttatagtttatgtcttataagcccatttgactaaaaaggacctgtttggtaacagtcactttctcacgagcttacagcttatttttatgagtt 23051714  T
Q  122 tatagcggtttttgataagctaattcaagtag 153  Q
    ||||||||||| ||||||||||||||||||||    
T  23051713 tatagcggtttgtgataagctaattcaagtag 23051682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 163
Target Start/End: Original strand, 39276304 - 39276423
Alignment:
Q  44 tataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagcta 143  Q
    ||||||||| ||||| |||||| ||  |||||   ||||||||||||  |||||||||||| |||||||| |  |||||||| || ||||||||||||||    
T  39276304 tataagctcatatgactaaaaatgactcgtttgataactgtcattttctcacgagcttataacttatttttactagcttataacgttttttgataagcta 39276403  T
Q  144 attcaagtagcctatagctt 163  Q
    ||||||||||| || |||||    
T  39276404 attcaagtagcttaaagctt 39276423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 185
Target Start/End: Complemental strand, 55723309 - 55723210
Alignment:
Q  86 atttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    |||||| |||||||||| |||||| ||| ||||| |||||||||| | ||||||||||||||||||||  |||  |||| ||||||| ||||||||||||    
T  55723309 attttttcacgagcttaaagcttaattttatgagattatagcggtatgtgataagctaattcaagtagtttatgacttatcacttttcatctcaatttta 55723210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 20988855 - 20988782
Alignment:
Q  130 tttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatcttgatta 203  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||  |||||| ||||    
T  20988855 tttttgataagctaattcaagtagcttatagcttatcattttttatctcaattttaaccctttaatcttaatta 20988782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 21501601 - 21501686
Alignment:
Q  79 aactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    |||||||| |||  ||||||||||||||||||||| |  ||| ||||| | ||||||||||||||||||||||||| |||||||||    
T  21501601 aactgtcactttctcacgagcttatagcttatttttactagcatatagtgttttttgataagctaattcaagtagcttatagctta 21501686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 41963458 - 41963371
Alignment:
Q  98 gcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||||| ||||| |  |||| ||||||||| ||| ||||||||||||||||||| | ||||||||| |||||| |||||||||||||    
T  41963458 gcttataacttatatctatgaacttatagcgatttgtgataagctaattcaagtaacttatagcttatcactttgtatctcaatttta 41963371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 2733475 - 2733406
Alignment:
Q  82 tgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagta 152  Q
    |||||||||||||| |||||||| |||||||| ||||||||| | | ||||||||||||||||||||||||    
T  2733475 tgtcatttttacaccagcttataacttattttaatgagctta-atcagtttttgataagctaattcaagta 2733406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 52986562 - 52986480
Alignment:
Q  82 tgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    ||||||||||||||||| ||||| |||  ||||||||| ||||| | ||||||||||||||| |||||||||  |||||||||    
T  52986562 tgtcatttttacacgagtttataactttatttcatgagattataacagtttttgataagctagttcaagtagtttatagctta 52986480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 3535168 - 3535237
Alignment:
Q  95 cgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    |||| |||||||||||||| |  | ||||||||| ||||||||||||||||||||||||| |||||||||    
T  3535168 cgagtttatagcttatttttactaacttatagcgttttttgataagctaattcaagtagcttatagctta 3535237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 52327451 - 52327512
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    ||||||||||| |||||  ||||||||||||||||| ||||||||||| |||||||||||||    
T  52327451 tttataagctagttcaactgctaattttaccaaacactacaaattcaaccagctagcttatc 52327512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 26552267 - 26552175
Alignment:
Q  93 cacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||||| ||||||||||||| |   |||||||| | ||||| ||||  ||||||||||||||||||| ||| || |||||||||||||||||    
T  26552267 cacgagcatatagcttatttttactggcttatagagttttttaataacataattcaagtagcctatagtttatcattttttatctcaatttta 26552175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 39276528 - 39276588
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttat 307  Q
    ||||||||||| ||||| | |||||||||||||||| ||||||||||||||||||| ||||    
T  39276528 tttataagctagttcaaccactaattttaccaaacactacaaattcaatcagctaggttat 39276588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 30070327 - 30070376
Alignment:
Q  265 cgctaattttaccaaacattacaaattcaatcagctagcttatctactat 314  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  30070327 cgctaattttaccaaacactacaaattcaattagctagcttatccactat 30070376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 185
Target Start/End: Complemental strand, 44555777 - 44555692
Alignment:
Q  100 ttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||||||| |||| |  ||||| ||||| |||||||||||||||| |||||||| ||||||||| ||   |||||||||||||||    
T  44555777 ttatagcttctttttactagcttttagcgttttttgataagctaatccaagtagcttatagcttatcatcatttatctcaatttta 44555692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 25885924 - 25886024
Alignment:
Q  37 tatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttga 136  Q
    |||| ||||||||||| ||||| ||||||| ||    || | |||||||||||| ||||||||||||||||| |||| || ||||||| | | |||||||    
T  25885924 tataacttataagctcatatgactaaaaaacat----tttgtaactgtcattttcacacgagcttatagcttgtttttattagcttatcgtgttttttga 25886019  T
Q  137 taagc 141  Q
    |||||    
T  25886020 taagc 25886024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 308
Target Start/End: Complemental strand, 34812743 - 34812665
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    |||| ||||||||||| ||| |||||||| ||||| | | |||||||| ||||| | |||||||||||||||||||||||    
T  34812743 ttttatgtcatttcatattt-ataagctagttcaaccacaaattttactaaacactgcaaattcaatcagctagcttatc 34812665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 2103228 - 2103182
Alignment:
Q  268 taattttaccaaacattacaaattcaatcagctagcttatctactat 314  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||    
T  2103228 taattttaccaaacactacaaattcaataagctagcttatctgctat 2103182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 1162394 - 1162443
Alignment:
Q  268 taattttaccaaacattacaaattcaatcagctagcttatctactatcag 317  Q
    ||||||||||||| ||||||||||||||||||||| |||||  |||||||    
T  1162394 taattttaccaaatattacaaattcaatcagctagattatccgctatcag 1162443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 13615308 - 13615223
Alignment:
Q  79 aactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    ||||||||||||  |||||| ||||| |||||||| ||||  |||| | | |||| |||||||||||| ||||||| |||||||||    
T  13615308 aactgtcattttctcacgagtttataccttatttttatgatattattgtgtttttcgataagctaatttaagtagcttatagctta 13615223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 295
Target Start/End: Original strand, 37713187 - 37713398
Alignment:
Q  87 tttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagca-ctttttatctcaatttta 185  Q
    ||||| ||||||||||||| || || |||  ||||||||||| || | |||||| |||||||| |||| ||||||||| ||  ||||| |||||||||||    
T  37713187 ttttttcacgagcttatagttttttctcacaagcttatagcgtttatcgataagttaattcaaatagcttatagcttatcatttttttctctcaatttta 37713286  T
Q  186 tccctacaatcttgatt---agnnnnnnntattaattaaatgcacattttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaaca 282  Q
     ||||   ||||| |||   |        ||||||| ||||| | |||||||||||||||||  ||||||||||| |||     ||||||||||| ||||    
T  37713287 cccctgtgatcttaattgaaaaaaatagatattaatcaaatgtatattttttgtcatttcat-atttataagctagttccgcaactaattttacccaaca 37713385  T
Q  283 ttacaaattcaat 295  Q
    |||||||||||||    
T  37713386 ttacaaattcaat 37713398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 41173918 - 41173990
Alignment:
Q  234 tgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttat 307  Q
    ||||||||||| ||| | |||||| ||||| || ||||||||||||||| |||||||||||||| ||| |||||    
T  41173918 tgtcatttcatattt-acaagctagttcaatcgataattttaccaaacaatacaaattcaatcaactaacttat 41173990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 19801019 - 19801063
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  19801019 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 19801063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 19801869 - 19801825
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  19801869 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 19801825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 27611852 - 27611812
Alignment:
Q  266 gctaattttaccaaacattacaaattcaatcagctagctta 306  Q
    ||||||||||||||||| |||||||||||||| ||||||||    
T  27611852 gctaattttaccaaacactacaaattcaatcaactagctta 27611812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 36181376 - 36181332
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  36181376 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 36181332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 37114440 - 37114396
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  37114440 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 37114396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 49335197 - 49335153
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  49335197 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 49335153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 52327328 - 52327392
Alignment:
Q  121 ttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||| || ||||||||||||||||||||||||| || ||||||  | ||||| |||||||||||    
T  52327328 ttataacgttttttgataagctaattcaagtagcttaaagcttataattttttctctcaatttta 52327392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 30802426 - 30802503
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    |||| ||||||||||| ||| ||||| || ||||| || ||||||||||||||| |||||||||||| ||||| ||||||    
T  30802426 ttttatgtcatttcatattt-ataagttaattcaatcg-taattttaccaaacactacaaattcaataagctaacttatc 30802503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 32474930 - 32474843
Alignment:
Q  104 agcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatcccta 191  Q
    ||||||||||||  || | |||| | |||||| ||||||  |||||||||| |||||| || || ||||| |||||||||||||||||    
T  32474930 agcttattttcactagttgatagtgttttttggtaagctgcttcaagtagcttatagcctatcattttttctctcaattttatcccta 32474843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 1162163 - 1162272
Alignment:
Q  41 gcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataag 140  Q
    |||||||||||||| ||| |||||| || ||||||   ||  |||| |||  ||||| ||||||||||||| | |  | ||||||||| | |||||||||    
T  1162163 gcttataagctcgtttgaataaaaaggacccgtttaataaacgtcactttctcacgaacttatagcttattcttactatcttatagcgttgtttgataag 1162262  T
Q  141 ctaattcaag 150  Q
    ||||||||||    
T  1162263 ctaattcaag 1162272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 308
Target Start/End: Complemental strand, 8130344 - 8130283
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    ||||||||||| |||||  ||||  |||| |||| | |||||||||||||||||||||||||    
T  8130344 tttataagctagttcaactgctagctttatcaaatactacaaattcaatcagctagcttatc 8130283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 25687082 - 25687123
Alignment:
Q  113 tcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||||||||||||||| ||||||| |||||| ||||||||||    
T  25687082 tcatgagcttatagcgttttttgaaaagctatttcaagtagc 25687123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 173
Target Start/End: Original strand, 26026623 - 26026756
Alignment:
Q  41 gcttataagctcgtatgattaaaa-aagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataa 139  Q
    |||||||||||| ||| | ||||| |||||||||||   |||||||||| |  ||| ||||||   |||||||| |  |||||||||||  |||||||||    
T  26026623 gcttataagctcatattactaaaaaaagatccgtttgataactgtcattatctcacaagcttacgacttatttttactagcttatagcgtgttttgataa 26026722  T
Q  140 gctaattcaagtagcctatagcttagcacttttt 173  Q
     |||||||||| ||| || |||||| || |||||    
T  26026723 actaattcaaggagcttagagcttatcatttttt 26026756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 41758558 - 41758607
Alignment:
Q  136 ataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||||||||||||||||| ||||||||| || ||| | |||||||||||    
T  41758558 ataagctaattcaagtagcttatagcttatcattttctctctcaatttta 41758607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 66
Target Start/End: Complemental strand, 47789617 - 47789588
Alignment:
Q  37 tatagcttataagctcgtatgattaaaaaa 66  Q
    ||||||||||||||||||||||||||||||    
T  47789617 tatagcttataagctcgtatgattaaaaaa 47789588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 52986411 - 52986362
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatc 296  Q
    |||| |||||||||||| |||||||||||||| ||| |||||||| ||||    
T  52986411 tttagaagctacttcaaccgctaattttaccatacactacaaatttaatc 52986362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 54683693 - 54683734
Alignment:
Q  113 tcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||| || ||||||| |||||||||||||||||    
T  54683693 tcatgagcttataacgttttttgaaaagctaattcaagtagc 54683734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 6287930 - 6287974
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||||||||||||||| || ||||||| |||||| ||||||||||    
T  6287930 ttttcatgagcttataacgttttttgaaaagctatttcaagtagc 6287974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 152
Target Start/End: Original strand, 17896025 - 17896057
Alignment:
Q  120 cttatagcggtttttgataagctaattcaagta 152  Q
    ||||||| |||||||||||||||||||||||||    
T  17896025 cttatagtggtttttgataagctaattcaagta 17896057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 32012640 - 32012684
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||||||||||| |||||| ||||||| |||||| ||||||||||    
T  32012640 ttttcatgagctcatagcgttttttgaaaagctatttcaagtagc 32012684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 33984181 - 33984225
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||| | ||||||| |||||| ||||||||||    
T  33984181 ttttcatgagcttatagtgttttttgaaaagctatttcaagtagc 33984225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 39033634 - 39033705
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagcta 301  Q
    |||| ||||||||||| |||| |||| || || || || |||||||| |||||| ||||||||||||||||||    
T  39033634 ttttatgtcatttcatatttt-taagttagtttaaccgataattttatcaaacactacaaattcaatcagcta 39033705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 53284100 - 53284144
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||| ||||| ||||||| |||||| ||||||||||    
T  53284100 ttttcatgagcttgtagcgttttttgaaaagctatttcaagtagc 53284144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 55001750 - 55001706
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||| ||||    
T  55001750 ttttcatgagcttatagcgttttttgaaaagctatttcaaatagc 55001706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 9004748 - 9004925
Alignment:
Q  21 atttgagctaatggtttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagc 120  Q
    |||| |||| |||| ||||||||||||||| ||||||||||||||| |||||||| |  |||  || |||||||||||||||||||||||||||||||||    
T  9004748 atttaagcttatggcttatagcttataagcccgtatgattaaaaaatatccgtttggttactaaca-ttttacacgagcttatagcttattttcatgagc 9004846  T
Q  121 ttatagcggtttttgataagctaattcaagtagcctatagcttagcac-tttttatctcaattttatccctacaatctt 198  Q
    ||||| |||||||||||||||||||||||||||| ||||||| | ||| ||||||||||||||||| | || |||||||    
T  9004847 ttatatcggtttttgataagctaattcaagtagcttatagctaatcacttttttatctcaattttacctctgcaatctt 9004925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 1621625 - 1621523
Alignment:
Q  96 gagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaat 195  Q
    |||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||| ||||||||| || ||||||||||||||||| || | ||||    
T  1621625 gagcttatagcttatttttatgtgcttttagcgttttttgataagctaattcaagtagcttatagcttatcagtttttatctcaattttacccttgcaat 1621526  T
Q  196 ctt 198  Q
    |||    
T  1621525 ctt 1621523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 121 - 327
Target Start/End: Original strand, 34640063 - 34640274
Alignment:
Q  121 ttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccc-tacaatcttgatt--agnnnnnnntattaa 217  Q
    |||||||||||| | ||||||||||||||||||| ||||| ||| |||||||||||||||||||| ||| | ||||||  |||  |        ||||||    
T  34640063 ttatagcggtttataataagctaattcaagtagcttatagtttatcactttttatctcaattttaccccttgcaatctcaattgaaaaaataaatattaa 34640162  T
Q  218 ttaaatgcaca---ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctactat 314  Q
    || ||||||||   |||| |||||||||||  ||||||||||||   || | ||||||||||||||||||||||||||||| ||||||||||||  ||||    
T  34640163 tttaatgcacaattttttatgtcatttcat-atttataagctacaataaccactaattttaccaaacattacaaattcaataagctagcttatccgctat 34640261  T
Q  315 cagaaataagcta 327  Q
    |||  ||||||||    
T  34640262 cagctataagcta 34640274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 34639944 - 34640061
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg 135  Q
    |||||||||||||||| |||| || | |||||| | |||| | |||||| | |||||||| ||||||||||||||||  |||||||||||||||||| |     
T  34639944 ttatagcttataagctggtattataataaaagacctgtttggtaactgttaattttacacaagcttatagcttatttctatgagcttatagcggtttata 34640043  T
Q  136 ataagctaattcaagtag 153  Q
    ||||||||||||||||||    
T  34640044 ataagctaattcaagtag 34640061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 16870024 - 16869932
Alignment:
Q  93 cacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||| |||||| |||||||| |  ||||||||||| ||||||||||||||||||||||||| ||||||||| || ||||||| |||||||||    
T  16870024 cacgaacttataccttatttttactagcttatagcgttttttgataagctaattcaagtagcttatagcttatcattttttatttcaatttta 16869932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 22028655 - 22028798
Alignment:
Q  42 cttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagc 141  Q
    ||||||||||| | ||| ||||||||| |||||| | ||| |||| |||  ||| ||||||||||||||||| |  | |||| || ||||| ||||||||    
T  22028655 cttataagctcatttgactaaaaaagacccgtttggtaaccgtcactttctcacaagcttatagcttatttttactaacttacagaggtttctgataagc 22028754  T
Q  142 taattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||||||| ||| |||| |||| || ||||||||||| |||||    
T  22028755 taattcaagcagcttataacttaacattttttatctcagtttta 22028798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 198
Target Start/End: Original strand, 32882662 - 32882831
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg 135  Q
    ||||||||| |||| || | ||| ||||| |||  ||||| | || |||||||||  |||||||||||||||||||||  ||||||||||  | ||||||    
T  32882662 ttatagcttttaagttcttctgactaaaagagactcgtttggtaattgtcattttctcacgagcttatagcttatttttttgagcttataatgttttttg 32882761  T
Q  136 ataagctaattcaagtagcctatagctta-------gcactttttatctcaattttatccctacaatctt 198  Q
    |||| |||||||||||||| || ||||||        |||||||||||||||||||| |||| |||||||    
T  32882762 ataaactaattcaagtagcttaaagcttacagcttctcactttttatctcaattttacccctgcaatctt 32882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 28363381 - 28363524
Alignment:
Q  42 cttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg-ataag 140  Q
    ||||||||||| | ||| || ||||||   |||| ||||| |||| |||  ||| |||||||||||||||||  || |||||||||| |||||  |||||    
T  28363381 cttataagctcatttgactataaaagacttgtttggcaaccgtcactttctcacaagcttatagcttattttactg-gcttatagcgttttttttataag 28363479  T
Q  141 ctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    |||| ||||||||| ||||||||| || |||||||||||||||||    
T  28363480 ctaactcaagtagcttatagcttatcattttttatctcaatttta 28363524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 6462469 - 6462402
Alignment:
Q  97 agcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    ||||||||||||||||| |  ||||||||| ||||||||||||||||||||||||||| |||| ||||    
T  6462469 agcttatagcttatttttactagcttatagtggtttttgataagctaattcaagtagcttatatctta 6462402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 198
Target Start/End: Complemental strand, 32826860 - 32826741
Alignment:
Q  79 aactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctc 178  Q
    |||| |||||||  |||||| ||||| |||||  ||||  | |||||||||||| |||||||||| ||||| || | ||||||||| |||||| ||||||    
T  32826860 aactatcattttagcacgagtttataacttatcatcatatgtttatagcggtttgtgataagctagttcaaataacttatagcttatcactttctatctc 32826761  T
Q  179 aattttatccctacaatctt 198  Q
    ||||||| || ||| |||||    
T  32826760 aattttacccataccatctt 32826741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 41893041 - 41892911
Alignment:
Q  34 gtttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttt 133  Q
    |||||| |||||||||||  ||||| |||||||||||| ||| |  || ||| || |  ||| |||||||||  |||||| |  |||||||||||  |||    
T  41893041 gtttatggcttataagcttctatgactaaaaaagatccatttggtcaccgtcgttctctcacaagcttatagtctatttttactagcttatagcgtgttt 41892942  T
Q  134 tgataagctaattcaagtagcctatagctta 164  Q
    ||||||||||||||||||||| || ||||||    
T  41892941 tgataagctaattcaagtagcttacagctta 41892911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 6462282 - 6462238
Alignment:
Q  265 cgctaattttaccaaacattacaaattcaatcagctagcttatct 309  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||    
T  6462282 cgctaattttactaaacactacaaattcaatcagctagcttatct 6462238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 31812082 - 31812126
Alignment:
Q  120 cttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  31812082 cttatagcggtttttgataagctaattcaagtagctcatagctta 31812126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 4283098 - 4283169
Alignment:
Q  93 cacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    ||||||||||||||||||||| |   ||||||| |  |||||||||||||||||||| |||| |||||||||    
T  4283098 cacgagcttatagcttatttttactggcttataccattttttgataagctaattcaaatagcttatagctta 4283169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 308
Target Start/End: Complemental strand, 31806661 - 31806583
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    |||| ||||||||||| ||| ||||| || ||||| |  ||||||||||||||| ||||||||||||| |||||||||||    
T  31806661 ttttatgtcatttcatattt-ataagatagttcaatccttaattttaccaaacaatacaaattcaatctgctagcttatc 31806583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 307
Target Start/End: Original strand, 31812166 - 31812205
Alignment:
Q  268 taattttaccaaacattacaaattcaatcagctagcttat 307  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  31812166 taattttaccaaacactacaaattcaatcagctagcttat 31812205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 1015022 - 1015118
Alignment:
Q  212 tattaattaaatgcacatttttt--gtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttat 307  Q
    ||||||||||||| |||||||||  |||||||||| | | || |||||||||||||  |||||||| ||||||  ||||||| |||||| ||||||||    
T  1015022 tattaattaaatgtacattttttatgtcatttcatatct-atgagctacttcaaacattaattttatcaaacacaacaaatttaatcagttagcttat 1015118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 13838925 - 13838879
Alignment:
Q  118 agcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    ||||||||| |||||||||| |||||||||||||||| |||||||||    
T  13838925 agcttatagtggtttttgattagctaattcaagtagcttatagctta 13838879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 31677162 - 31677240
Alignment:
Q  113 tcatgagcttatagcggtttttgataagctaattc-aagtagcctatagcttagcactttttatctcaattttatccct 190  Q
    |||||||||||||||| | ||||||||| |||||  ||||||| ||||||||| || | ||||||||||||||| ||||    
T  31677162 tcatgagcttatagcgttctttgataagttaattgtaagtagcttatagcttatcattgtttatctcaattttacccct 31677240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 164
Target Start/End: Original strand, 34639744 - 34639854
Alignment:
Q  54 tatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtag 153  Q
    ||||||||||||||| | |||||| |||  |||||||  ||| |||||||| ||| |||| |  |  |||||||   |||||||||||||||||||||||    
T  34639744 tatgattaaaaaagacctgtttcgtaacaatcattttctcaccagcttataacttttttttagtatgttatagcatcttttgataagctaattcaagtag 34639843  T
Q  154 cctatagctta 164  Q
    | |||||||||    
T  34639844 cttatagctta 34639854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 31677297 - 31677369
Alignment:
Q  234 tgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttat 307  Q
    ||||||||||| |||  ||||||| ||||| ||||| |||||||||||| |  |||||||||||||||||||||    
T  31677297 tgtcatttcatatttg-taagctagttcaaccgctagttttaccaaacactgtaaattcaatcagctagcttat 31677369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 327
Target Start/End: Original strand, 2942084 - 2942164
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctactatcagaaataagcta 327  Q
    |||||||| || ||||| | |||||||||||||||  ||||||||||| || ||||||||||  |||||||  ||||||||    
T  2942084 tttataagttagttcaaccactaattttaccaaaccctacaaattcaaccaactagcttatccgctatcagctataagcta 2942164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 6789620 - 6789576
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  6789620 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 6789576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 15498738 - 15498782
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  15498738 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 15498782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 16218314 - 16218262
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagcctatagct 162  Q
    ||||||||||||||||||| ||||||| |||||| ||||| |||| |||||||    
T  16218314 ttttcatgagcttatagcgttttttgaaaagctatttcaaatagcttatagct 16218262  T

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Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 24171458 - 24171502
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  24171458 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 24171502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 29525327 - 29525283
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  29525327 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 29525283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 36761155 - 36761199
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  36761155 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 36761199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 37530751 - 37530707
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  37530751 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 37530707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 41734275 - 41734231
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  41734275 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 41734231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 42422902 - 42422946
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  42422902 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 42422946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 42709404 - 42709448
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  42709404 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 42709448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 2941874 - 2942016
Alignment:
Q  42 cttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagc 141  Q
    ||||||||||| | ||| ||||||| | |||||| | ||| | ||||| | || |||| ||||||||||||| |  ||||||| ||  ||||||||||||    
T  2941874 cttataagctcatttgactaaaaaacacccgtttggtaaccgccatttgt-catgagcatatagcttatttttactagcttattgcattttttgataagc 2941972  T
Q  142 taattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    |||| ||| |||| || |||||| ||   |||||||||||||||    
T  2941973 taatccaaatagcttagagcttatcatcctttatctcaatttta 2942016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 159
Target Start/End: Complemental strand, 11863425 - 11863386
Alignment:
Q  120 cttatagcggtttttgataagctaattcaagtagcctata 159  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  11863425 cttatatcggtttttgataagctaattcaagtagcttata 11863386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 15120948 - 15120889
Alignment:
Q  114 catgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcacttttt 173  Q
    ||||||||||||||| ||||||||||||||| |||  |||| ||||||||| || |||||    
T  15120948 catgagcttatagcgttttttgataagctaactcacatagcttatagcttatcatttttt 15120889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 1621480 - 1621415
Alignment:
Q  234 tgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagct 300  Q
    ||||||||||| ||| |||||||||||||| |||||||||||||  | |||| || |||||||||||    
T  1621480 tgtcatttcatattt-ataagctacttcaaccgctaattttaccggatattataagttcaatcagct 1621415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 13359487 - 13359445
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagta 152  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||    
T  13359487 ttttcatgagcttatagcgttttttgaaaagctatttcaagta 13359445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 17259450 - 17259520
Alignment:
Q  94 acgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    ||||||||| || |||| ||||  ||||||||||| ||||| ||||| ||||||||||||  |||||||||    
T  17259450 acgagcttaaagattatattcactagcttatagcgtttttttataagttaattcaagtagattatagctta 17259520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 301
Target Start/End: Complemental strand, 41892821 - 41892767
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagcta 301  Q
    ||||||||||| || || || ||||| ||||||||| ||||||||||||||||||    
T  41892821 tttataagctagtttaaccgttaattataccaaacactacaaattcaatcagcta 41892767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 5390445 - 5390506
Alignment:
Q  246 ttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttat 307  Q
    ||||| |||||| ||||| |||| |||| |||||||| |||||||||||| ||||| |||||    
T  5390445 ttttagaagctagttcaaccgctcatttaaccaaacactacaaattcaattagctaccttat 5390506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 17259623 - 17259676
Alignment:
Q  248 ttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagcta 301  Q
    |||||||||| ||||| |||||||||||| || || | ||||||||||||||||    
T  17259623 ttataagctagttcaaccgctaattttactaaccactgcaaattcaatcagcta 17259676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 17902803 - 17902864
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    ||||||||||| |||||  |||| |||||||||||| |||||||| ||||| |||| |||||    
T  17902803 tttataagctagttcaactgctagttttaccaaacactacaaatttaatcaactagtttatc 17902864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 10815156 - 10815200
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||  ||||||| |||||| ||||||||||    
T  10815156 ttttcatgagcttatagcattttttgaaaagctatttcaagtagc 10815200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 11653866 - 11653834
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaaga 68  Q
    ||||||||||||| |||||||||||||||||||    
T  11653866 ttatagcttataatctcgtatgattaaaaaaga 11653834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 12280874 - 12280918
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| || |||||||    
T  12280874 ttttcatgagcttatagcgttttttgaaaagctattttaagtagc 12280918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 12939888 - 12939844
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||| ||||    
T  12939888 ttttcatgagcttatagcgttttttgaaaagctatttcaaatagc 12939844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 12953838 - 12953794
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||| ||||    
T  12953838 ttttcatgagcttatagcgttttttgaaaagctatttcaaatagc 12953794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 18336380 - 18336447
Alignment:
Q  38 atagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagc 106  Q
    ||||| ||||||||||||||||| ||||||| | |||| | |||||| ||||||||| | |||||||||    
T  18336380 atagcatataagctcgtatgatt-aaaaagacctgtttggtaactgttatttttacatgtgcttatagc 18336447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 23590732 - 23590776
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||  ||||||| |||||| ||||||||||    
T  23590732 ttttcatgagcttatagcattttttgaaaagctatttcaagtagc 23590776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 185
Target Start/End: Complemental strand, 34590269 - 34590181
Alignment:
Q  97 agcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||| ||||||||||| |  | ||||||||| ||||| |||||||||||  |||||| || |||||| |   ||||||||||||||||    
T  34590269 agcttgtagcttatttttaccaacttatagcgtttttttataagctaatttgagtagcttaaagcttaacgtcttttatctcaatttta 34590181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 3e-42; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 36 - 309
Target Start/End: Original strand, 37334436 - 37334709
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg 135  Q
    ||||| |||||||||| |||||||||||||||| | ||||   |||||||||||||||||||| |||||||  |||||||||||||||||  ||||| |     
T  37334436 ttatatcttataagcttgtatgattaaaaaagaccggtttgataactgtcatttttacacgagtttatagcagattttcatgagcttataatggtttatt 37334535  T
Q  136 ataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatcttgattagnnnnnnntattaattaaatgcacatttt--t 233  Q
    ||||||||| ||| ||||| ||||||||  | ||||||||||||||||||||| | ||||||| ||| |       |||||||| ||||||||||||       
T  37334536 ataagctaactcacgtagcttatagcttttcgctttttatctcaattttatccgtgcaatcttaatt-gaaaaaaatattaatttaatgcacattttcga 37334634  T
Q  234 tgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatct 309  Q
    |||||||||||  |||||| ||||||| |  ||||||||||| |||||| | || ||||||||| |||||||||||    
T  37334635 tgtcatttcat-atttatatgctactttagtcgctaattttatcaaacactgcatattcaatcaactagcttatct 37334709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 36 - 203
Target Start/End: Original strand, 32645687 - 32645853
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg 135  Q
    |||||| |||||||||||| |||||||||||||   |||| | || |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  32645687 ttatagtttataagctcgtgtgattaaaaaagagttgtttagtaattgtcatttttacacgagcttatagtttattttaatgagcttatagcgg-ttttg 32645785  T
Q  136 ataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatcttgatta 203  Q
    ||||| ||| ||||||||| || |||||| ||||||||||||| |||||| | || ||||||| ||||    
T  32645786 ataagttaagtcaagtagcttaaagcttatcactttttatctccattttaccactccaatcttaatta 32645853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 54 - 164
Target Start/End: Original strand, 43822487 - 43822597
Alignment:
Q  54 tatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtag 153  Q
    |||||||||||||||||||||| | || |||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  43822487 tatgattaaaaaagatccgtttggtaattgtcatttttacacaagcttatagcttattttcatgagattatagtggtttttgataagctaattcaagtag 43822586  T
Q  154 cctatagctta 164  Q
    | || ||||||    
T  43822587 cttaaagctta 43822597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 37083794 - 37083938
Alignment:
Q  42 cttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagc 141  Q
    ||||||||||| | |||||||||||||  ||||  | |||||||| |||  ||||||||||||||||||||| |  ||||||||||  ||||| ||||||    
T  37083794 cttataagctcatttgattaaaaaagacacgttaggtaactgtcactttctcacgagcttatagcttatttttactagcttatagcaatttttaataagc 37083893  T
Q  142 taattcaagtagcctatagcttagca-ctttttatctcaatttta 185  Q
    ||||||||||||| ||||||||| ||  |||||||| ||||||||    
T  37083894 taattcaagtagcttatagcttatcatatttttatcacaatttta 37083938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 198
Target Start/End: Complemental strand, 32326258 - 32326120
Alignment:
Q  60 taaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctata 159  Q
    ||||||||| |||||| | | | |||| |||  ||| ||||| ||||||||||| |  ||||||||| ||||||||||||||||||||||||||| ||||    
T  32326258 taaaaaagacccgtttggtatccgtcactttctcacaagcttgtagcttatttttactagcttatagaggtttttgataagctaattcaagtagcttata 32326159  T
Q  160 gcttagcactttttatctcaattttatccctacaatctt 198  Q
    ||||| || | ||||| ||||||||| |||| |||||||    
T  32326158 gcttatcattatttatatcaattttacccctgcaatctt 32326120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 164
Target Start/End: Complemental strand, 9198299 - 9198195
Alignment:
Q  60 taaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctata 159  Q
    ||||||||| |||||| | ||| |||| |||  |||||||||| |||||||||| |  ||||||||||||||||||||||||||||||||||||| | ||    
T  9198299 taaaaaagacccgtttagtaaccgtcactttctcacgagcttaaagcttatttttactagcttatagcggtttttgataagctaattcaagtagctttta 9198200  T
Q  160 gctta 164  Q
    |||||    
T  9198199 gctta 9198195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 164
Target Start/End: Complemental strand, 38684898 - 38684772
Alignment:
Q  38 atagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgat 137  Q
    ||||||||| || || ||||| | |||||||||||||| | ||| ||||||||  || |||||| ||  ||||||| |  ||||||||||| ||||||||    
T  38684898 atagcttatcagttcatatgactgaaaaagatccgtttggtaaccgtcattttctcaggagcttgtaaattatttttactagcttatagcgttttttgat 38684799  T
Q  138 aagctaattcaagtagcctatagctta 164  Q
    ||||||||||||||||| |||||||||    
T  38684798 aagctaattcaagtagcttatagctta 38684772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 32117833 - 32117908
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||||||||||||||| | ||||||||||||||||||||||| |  |||||||| || ||||||||| |||||||    
T  32117833 ttttcatgagcttatagagttttttgataagctaattcaagtacctgatagcttatcattttttatctaaatttta 32117908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 32582458 - 32582557
Alignment:
Q  99 cttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatctt 198  Q
    ||||||||||||||| |  ||||||||||  |||||||||||  | ||||| |||| ||||||||| |||||||||||||||||||| || | |||||||    
T  32582458 cttatagcttatttttactagcttatagccttttttgataaggcagttcaactagcttatagcttatcactttttatctcaattttacccttgcaatctt 32582557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 154
Target Start/End: Original strand, 44539130 - 44539185
Alignment:
Q  99 cttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  44539130 cttatagcttactttcataagcttatagtggtttttgataagctaattcaagtagc 44539185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 32109499 - 32109584
Alignment:
Q  79 aactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    |||||||| |||  || |||||||||||||||||| |  |||||| |||  ||||||||||||||||||||||||| |||||||||    
T  32109499 aactgtcactttcccatgagcttatagcttatttttaaaagcttaaagcaatttttgataagctaattcaagtagcttatagctta 32109584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 9780546 - 9780476
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctactatcag 317  Q
    ||||||| ||| ||||| || ||||||||||||||||||||||| ||||||| || |||||| ||||||||    
T  9780546 tttataaactagttcaaccgttaattttaccaaacattacaaatccaatcagttaacttatcaactatcag 9780476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 20873252 - 20873186
Alignment:
Q  118 agcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttt 184  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||| || | |||||| |||||||    
T  20873252 agcttatagtggtttttgataagctaattcaagtaacttatagcttatcattatttatcccaatttt 20873186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 8879457 - 8879510
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctt 163  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||    
T  8879457 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagccgatagctt 8879510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 12122887 - 12122843
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||    
T  12122887 ttttcattagcttatagcgttttttgataagctaattcaagtagc 12122843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 308
Target Start/End: Original strand, 32645888 - 32645947
Alignment:
Q  249 tataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    ||||||||||||||| | |||| ||||||||||||||||||||||| | | |||||||||    
T  32645888 tataagctacttcaaccactaaatttaccaaacattacaaattcaaccggttagcttatc 32645947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 314
Target Start/End: Original strand, 35696646 - 35696693
Alignment:
Q  267 ctaattttaccaaacattacaaattcaatcagctagcttatctactat 314  Q
    |||||||||||||||| ||||||||||||| ||||||||||| |||||    
T  35696646 ctaattttaccaaacactacaaattcaatctgctagcttatccactat 35696693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 2948953 - 2948883
Alignment:
Q  128 ggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatctt 198  Q
    ||||| ||||||| ||||||||||||| |||||||||  | ||||||||| |||||||||| | |||||||    
T  2948953 ggtttgtgataagttaattcaagtagcttatagcttattattttttatctaaattttatccttgcaatctt 2948883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 1384162 - 1384247
Alignment:
Q  79 aactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    ||||||||||||  ||| ||||||| ||||||||| || ||||||| ||| |||||||||   ||| ||||||||| |||||||||    
T  1384162 aactgtcattttatcacaagcttattgcttatttttataagcttatcgcgttttttgatagattaactcaagtagcttatagctta 1384247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 327
Target Start/End: Complemental strand, 32326058 - 32325981
Alignment:
Q  250 ataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctactatcagaaataagcta 327  Q
    |||||||| |||||   |||||||||||||||| ||||||||| |||| |||||||||| ||||| ||  ||||||||    
T  32326058 ataagctagttcaactactaattttaccaaacactacaaattccatcaactagcttatccactattagctataagcta 32325981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 317
Target Start/End: Original strand, 32582611 - 32582679
Alignment:
Q  248 ttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctactatcag 317  Q
    |||||||||||||||   ||||||||||||||||| |||||||||||||| |||| |||||  |||||||    
T  32582611 ttataagctacttcacg-gctaattttaccaaacactacaaattcaatcaactaggttatcagctatcag 32582679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 33674589 - 33674505
Alignment:
Q  113 tcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatctt 198  Q
    ||||||||||||| | ||||| |||||||| ||||||||||| |||| ||||  | | ||||||||||||||| |||||| |||||    
T  33674589 tcatgagcttataacagttttcgataagctgattcaagtagcttataactta-tattatttatctcaattttacccctaccatctt 33674505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 2557908 - 2557864
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  2557908 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 2557864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 315
Target Start/End: Complemental strand, 33674451 - 33674383
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctactatc 315  Q
    ||||| ||||| |||||  ||| |||||| |||||| |||||||||||| |||||||||||| ||||||    
T  33674451 tttatgagctagttcaactgctgattttagcaaacactacaaattcaatgagctagcttatcaactatc 33674383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 34435981 - 34435937
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  34435981 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 34435937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 41991690 - 41991646
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  41991690 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 41991646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 54463462 - 54463418
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  54463462 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 54463418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 152
Target Start/End: Complemental strand, 9558863 - 9558824
Alignment:
Q  113 tcatgagcttatagcggtttttgataagctaattcaagta 152  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  9558863 tcatgagcttatagcgttttttgataatctaattcaagta 9558824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 11041987 - 11042038
Alignment:
Q  113 tcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    |||||||||||||||| | || |||||||||||||||||||  |||||||||    
T  11041987 tcatgagcttatagcgttcttagataagctaattcaagtagtttatagctta 11042038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 13800113 - 13800054
Alignment:
Q  94 acgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtag 153  Q
    ||||||||||||||||| || |||  ||||||||| ||||| ||||| ||||||||||||    
T  13800113 acgagcttatagcttatctttatggtcttatagcgttttttcataagttaattcaagtag 13800054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 36237929 - 36237972
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtag 153  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||    
T  36237929 ttttcatgagcttatagcgttttttgaaaagctatttcaagtag 36237972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 301
Target Start/End: Complemental strand, 45021384 - 45021349
Alignment:
Q  266 gctaattttaccaaacattacaaattcaatcagcta 301  Q
    ||||||||||||||||| ||||||||||||||||||    
T  45021384 gctaattttaccaaacactacaaattcaatcagcta 45021349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 314
Target Start/End: Original strand, 50882422 - 50882489
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctactat 314  Q
    ||||||||||| ||||  ||||||||||||||| || |||||||| ||||| ||||| ||| ||||||    
T  50882422 tttataagctagttcagccgctaattttaccaatcactacaaattaaatcaactagcctatgtactat 50882489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 55226393 - 55226432
Alignment:
Q  115 atgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  55226393 atgagcttatagcgttttttgaaaagctaattcaagtagc 55226432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 13800037 - 13799995
Alignment:
Q  156 tatagcttagcactttttatctcaattttatccctacaatctt 198  Q
    ||||||||| |||||||||||||||||||| |||| |||||||    
T  13800037 tatagcttatcactttttatctcaattttacccctgcaatctt 13799995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 307
Target Start/End: Complemental strand, 20873114 - 20873056
Alignment:
Q  249 tataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttat 307  Q
    |||||| |||||||| |||| ||||||||||||| || ||||||||| ||||| |||||    
T  20873114 tataagttacttcaaccgctgattttaccaaacactaaaaattcaataagctaacttat 20873056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 12764767 - 12764808
Alignment:
Q  113 tcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||||||||||||||| ||||||| |||||| ||||||||||    
T  12764767 tcatgagcttatagcgatttttgaaaagctatttcaagtagc 12764808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 308
Target Start/End: Complemental strand, 18084930 - 18084870
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    |||||||| || ||||| || ||||||||||||||| | |||||||||||||||| ||||||    
T  18084930 tttataagttaattcaatcg-taattttaccaaacactgcaaattcaatcagctaacttatc 18084870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 32117975 - 32118036
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    ||||||||||| ||||   |||||| |||||||||| || ||||||| ||||||||||||||    
T  32117975 tttataagctagttcagctgctaatcttaccaaacactaaaaattcagtcagctagcttatc 32118036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 44947342 - 44947255
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttata 125  Q
    ||||||||||||||||||| |||| ||||||| || |||| |  |||||| |||   ||||||||||||||||| ||||| |||||||||    
T  44947342 ttatagcttataagctcgtttgataaaaaaagctctgttt-ggtactgtcttttcaccacgagcttatagctta-tttcacgagcttata 44947255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 30317950 - 30317906
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| || ||| ||||||||||    
T  30317950 ttttcatgagcttatagcgttttttgaaaatctatttcaagtagc 30317906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 35682656 - 35682716
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttat 307  Q
    ||||||||||| || || | ||| |||||||||||| ||||||||||||||  ||||||||    
T  35682656 tttataagctaattaaatctctagttttaccaaacactacaaattcaatcaattagcttat 35682716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 36879118 - 36879054
Alignment:
Q  100 ttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    ||||| |||||||| |  ||||||||||  ||||| ||||||||||||||||||| || ||||||    
T  36879118 ttataacttatttttactagcttatagcatttttttataagctaattcaagtagcttagagctta 36879054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 52184833 - 52184789
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| || |||||||    
T  52184833 ttttcatgagcttatagcgttttttgaaaagctattttaagtagc 52184789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 4e-38; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 40909819 - 40910003
Alignment:
Q  1 gtctgtttagtgagacgtggatttgagctaatggtttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagct 100  Q
    ||||||||||| |||| |  | ||||||  |||| |||||||||||||||| |||||||||||||| | | |||| | ||||||||| |  | || ||||    
T  40909819 gtctgtttagtaagacataaagttgagcgtatggcttatagcttataagcttgtatgattaaaaaataccagtttggtaactgtcatctgaagacaagct 40909918  T
Q  101 tatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    |||| |||||||||||||||||||| || ||||||||||||||||||||||||  ||||| ||| ||||||||||||||||||||    
T  40909919 tataacttattttcatgagcttataacgttttttgataagctaattcaagtagtttataggttatcactttttatctcaatttta 40910003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 44984504 - 44984320
Alignment:
Q  1 gtctgtttagtgagacgtggatttgagctaatggtttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagct 100  Q
    ||||||||||| |||| |  | ||||||  |||| || ||||||||||||| |||||||||||||| | | |||| | ||||||||| |  | || ||||    
T  44984504 gtctgtttagtaagacataaagttgagcgtatggcttgtagcttataagcttgtatgattaaaaaataccagtttggtaactgtcatctgaagacaagct 44984405  T
Q  101 tatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    |||| |||||||||| ||||||||| || ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  44984404 tataacttattttcacgagcttataacgttttttgataagctaattcaagtagcttataggttatcactttttatctcaatttta 44984320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 31062936 - 31063013
Alignment:
Q  87 tttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    |||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  31062936 tttttatacgagcttataacttattttcaagagcttatagcggtttttgataagctatttcaagtagcttatagctta 31063013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 97 - 317
Target Start/End: Original strand, 42139387 - 42139610
Alignment:
Q  97 agcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatc 196  Q
    ||||||||||||||||| || |||||||||||| |||||  ||||||||||||||||  ||||||||| || | ||||||||||||||| ||||  ||||    
T  42139387 agcttatagcttatttttattagcttatagcgg-ttttgtcaagctaattcaagtagattatagcttatcattatttatctcaattttacccctctaatc 42139485  T
Q  197 ttgatt---agnnnnnnntattaattaaatgca-ca-ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaatt 291  Q
    || |||   |        ||||||||||||| | || |||| | |||||||||  ||||||||||| |||||  ||||||||||||||||| ||||||||    
T  42139486 ttaattgaaaaaattaaatattaattaaatgtagcacttttatatcatttcat-atttataagctagttcaactgctaattttaccaaacactacaaatt 42139584  T
Q  292 caatcagctagcttatctactatcag 317  Q
     ||  |||||| |||||  |||||||    
T  42139585 gaacaagctagattatccgctatcag 42139610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 153
Target Start/End: Complemental strand, 12238651 - 12238594
Alignment:
Q  96 gagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtag 153  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  12238651 gagcttatggcttattttcatgagtttatagcggttttcgataagctaattcaagtag 12238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 185
Target Start/End: Original strand, 44810061 - 44810149
Alignment:
Q  97 agcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||||||||||||||| |  ||||| ||||| ||||| ||||||||||||||||||| ||||  ||| || |||||||||||||||||    
T  44810061 agcttatagcttatttttactagcttttagcgttttttaataagctaattcaagtagcttatatgttaccattttttatctcaatttta 44810149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 27679071 - 27679142
Alignment:
Q  93 cacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    ||||||||||||||||||||| |  ||||||||||| ||||| ||||||||||||||||||| ||| |||||    
T  27679071 cacgagcttatagcttatttttactagcttatagcgttttttaataagctaattcaagtagcttatggctta 27679142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 15804508 - 15804557
Alignment:
Q  268 taattttaccaaacattacaaattcaatcagctagcttatctactatcag 317  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  15804508 taattttaccaaacattacaaattcaatcagctagtttatccactatcag 15804557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 327
Target Start/End: Complemental strand, 44984287 - 44984167
Alignment:
Q  212 tattaattaaatgcacatttttt---gtcatttcatcttttataagctacttcaaacgctaatttta---ccaaacattacaaattcaatcagctagctt 305  Q
    |||||||||||||||||||||||   |||||||||| ||| ||||| ||||| || |||||||||||   | ||||| |||||||| |||| ||||||||    
T  44984287 tattaattaaatgcacatttttttatgtcatttcatattt-ataaggtactttaaccgctaattttattacaaaacactacaaattgaatctgctagctt 44984189  T
Q  306 atctactatcagaaataagcta 327  Q
    ||| ||||||||  ||||||||    
T  44984188 atccactatcagctataagcta 44984167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 27863868 - 27863939
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagcta 301  Q
    ||||||||||||||| | |||||||||||| |||| || |||||||| |||||| ||||||||||||||||||    
T  27863868 ttttttgtcatttca-catttataagctacctcaaccggtaattttatcaaacactacaaattcaatcagcta 27863939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 15804440 - 15804495
Alignment:
Q  130 tttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||||||||||||||||||||||| ||||||||| || | |||||||||||||||    
T  15804440 tttttgataagctaattcaagtagcttatagcttatcattatttatctcaatttta 15804495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 164
Target Start/End: Complemental strand, 44809992 - 44809871
Alignment:
Q  42 cttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagc 141  Q
    ||||||||||| | ||| ||||||||  | |||| | ||  |||| |||| || |||||||||||| |||||  | ||||||||||||||| ||||||||    
T  44809992 cttataagctcatttgactaaaaaaggccggtttggtaatggtcactttttcatgagcttatagctaattttg-taagcttatagcggtttgtgataagc 44809894  T
Q  142 taattcaagtagcctatagctta 164  Q
    ||||||||||||| ||| |||||    
T  44809893 taattcaagtagcttatggctta 44809871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 327
Target Start/End: Original strand, 40910036 - 40910152
Alignment:
Q  216 aattaaatgcacatttttt---gtcatttcatcttttataagctacttcaaacgctaatttta---ccaaacattacaaattcaatcagctagcttatct 309  Q
    |||||||||||||||||||   |||||||||| ||| ||||| ||||| || |||||||||||   | ||||| |||||||| |||| |||||||||||     
T  40910036 aattaaatgcacatttttttatgtcatttcatattt-ataaggtactttaaccgctaattttattacaaaacactacaaattgaatctgctagcttatcc 40910134  T
Q  310 actatcagaaataagcta 327  Q
    ||||||||  ||||||||    
T  40910135 actatcagctataagcta 40910152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 42034452 - 42034523
Alignment:
Q  131 ttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatcttgatt 202  Q
    |||||||||||||||||||||||  ||||||||| || |  |||||||||||||| || |||||| ||||||    
T  42034452 ttttgataagctaattcaagtagattatagcttatcattacttatctcaattttacccttacaattttgatt 42034523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 314
Target Start/End: Complemental strand, 30804427 - 30804361
Alignment:
Q  248 ttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctactat 314  Q
    |||||| ||| ||||| |||||||||||| ||||| |||||||||||| || |||||||||| ||||    
T  30804427 ttataatctagttcaaccgctaattttacgaaacactacaaattcaattagttagcttatctgctat 30804361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 1876039 - 1875995
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  1876039 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 1875995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 7454625 - 7454669
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  7454625 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 7454669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 8875766 - 8875810
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  8875766 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 8875810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 12160920 - 12160876
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  12160920 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 12160876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 14958213 - 14958257
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  14958213 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 14958257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 34245339 - 34245383
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  34245339 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 34245383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 38324331 - 38324375
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  38324331 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 38324375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 35189302 - 35189369
Alignment:
Q  93 cacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatag 160  Q
    |||||||||| ||||| |||| |  |||||||| || |||||||||||||||||| |||||| |||||    
T  35189302 cacgagcttaaagcttgtttttactagcttataacgatttttgataagctaattcgagtagcttatag 35189369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 42519807 - 42519850
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtag 153  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||    
T  42519807 ttttcatgagcttatagcgttttttgaaaagctatttcaagtag 42519850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 2346912 - 2346854
Alignment:
Q  250 ataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    |||| ||| ||||| || ||||||||||||||||||||||| ||||||| || ||||||    
T  2346912 ataaactagttcaaccgttaattttaccaaacattacaaatccaatcagttaacttatc 2346854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 8752607 - 8752691
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctactatc 315  Q
    |||| ||||||||||| ||| |||||||| |||||| ||  ||||||||||| | |||||||||||| || ||||||||| ||||||    
T  8752607 ttttatgtcatttcatattt-ataagctaattcaaatgcagattttaccaaa-actacaaattcaattagttagcttatcaactatc 8752691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 31063077 - 31063184
Alignment:
Q  212 tattaattaaatgcacatttttt---gtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    ||||||||||||| ||||||| |   |||||||||| ||| ||||  |||||||| ||||||| ||| |||||| ||||||||||||| | ||| |||||    
T  31063077 tattaattaaatgtacattttcttatgtcatttcatattt-ataaattacttcaaccgctaatcttatcaaacactacaaattcaatctgttagtttatc 31063175  T
Q  309 tactatcag 317  Q
      |||||||    
T  31063176 cgctatcag 31063184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 5946409 - 5946454
Alignment:
Q  272 tttaccaaacattacaaattcaatcagctagcttatctactatcag 317  Q
    |||||||||||||| ||||||||||||||| ||||||  |||||||    
T  5946409 tttaccaaacattataaattcaatcagctaccttatccgctatcag 5946454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 10911593 - 10911666
Alignment:
Q  117 gagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccct 190  Q
    |||||||||||   |||||||||||||| |||| |||| |||| |||| || ||||| ||||||||||| ||||    
T  10911593 gagcttatagcttattttgataagctaaatcaattagcttataacttaacattttttctctcaattttacccct 10911666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 291
Target Start/End: Original strand, 15967967 - 15968023
Alignment:
Q  234 tgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaatt 291  Q
    ||||||||||| ||| |||||||| ||||| ||||||||||||||| || ||||||||    
T  15967967 tgtcatttcatattt-ataagctagttcaaccgctaattttaccaagcactacaaatt 15968023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 305
Target Start/End: Original strand, 33625708 - 33625761
Alignment:
Q  252 aagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagctt 305  Q
    |||||| ||||  |||||||| ||||||||| ||||||||||| ||||||||||    
T  33625708 aagctaattcagtcgctaattataccaaacactacaaattcaaccagctagctt 33625761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 38809045 - 38808956
Alignment:
Q  62 aaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagt 151  Q
    ||||||| | |||| | |||||||| |||  ||| ||||||||||||| ||| |  ||||||||||| ||| |||||||||||| |||||    
T  38809045 aaaaagacctgtttggtaactgtcactttctcacaagcttatagcttaattttactagcttatagcgttttatgataagctaatccaagt 38808956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 4549031 - 4549071
Alignment:
Q  269 aattttaccaaacattacaaattcaatcagctagcttatct 309  Q
    |||||||||||||| |||||||||||| || ||||||||||    
T  4549031 aattttaccaaacaatacaaattcaatgagttagcttatct 4549071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 5505703 - 5505780
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    |||||||||||||||| |||  ||||||| ||||| ||| || ||||| ||||| |||||||| ||||| || |||||||    
T  5505703 ttttttgtcatttcatattt--taagctaattcaaccgccaagtttactaaacagtacaaatttaatcaactggcttatc 5505780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 5774186 - 5774230
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||  ||||||| |||||| ||||||||||    
T  5774186 ttttcatgagcttatagcattttttgaaaagctatttcaagtagc 5774230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 16496622 - 16496578
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| |||| |||||    
T  16496622 ttttcatgagcttatagcgttttttgaaaagctatttcaggtagc 16496578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 27679229 - 27679299
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagcta 301  Q
    |||| ||||||||||| ||| |||||||| ||||| |||||||||||||| ||| || ||| |||||||||||    
T  27679229 ttttatgtcatttcatattt-ataagctagttcaaccgctaattttaccagacactataaa-tcaatcagcta 27679299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 30523702 - 30523746
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||||    
T  30523702 ttttcatgagcttatagcgttttttgaaaagttatttcaagtagc 30523746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 316
Target Start/End: Original strand, 35442772 - 35442820
Alignment:
Q  268 taattttaccaaacattacaaattcaatcagctagcttatctactatca 316  Q
    |||||||| ||||||||||||||| ||||| ||| ||||||| ||||||    
T  35442772 taattttatcaaacattacaaatttaatcaactaccttatctgctatca 35442820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 36936079 - 36936035
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||| |||||||||||||| ||||||| |||||| ||||||||||    
T  36936079 ttttaatgagcttatagcgttttttgaaaagctatttcaagtagc 36936035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 39241167 - 39241123
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||  ||||||| |||||| ||||||||||    
T  39241167 ttttcatgagcttatagcattttttgaaaagctatttcaagtagc 39241123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 44525993 - 44525949
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||| ||||||||||| ||||||| |||||| ||||||||||    
T  44525993 ttttcattagcttatagcgttttttgagaagctatttcaagtagc 44525949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 44810218 - 44810277
Alignment:
Q  248 ttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    |||||||||| ||||  ||||| ||||||||||   |||||||||||||||||||||||||    
T  44810218 ttataagctagttcac-cgctagttttaccaaatgctacaaattcaatcagctagcttatc 44810277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 28444911 - 28444776
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg 135  Q
    ||||||||||||||||||||||||||||||| | | |||| | |||| ||||||||||| |||||||||||||||||| ||||||||| || || |||||    
T  28444911 ttatagcttataagctcgtatgattaaaaaatacctgtttggtaactctcatttttacaagagcttatagcttatttttatgagcttagagagggttttg 28444812  T
Q  136 ataagctaattcaagtagcctatagcttagcacttt 171  Q
    ||||||||||| ||||||| ||||||||| ||||||    
T  28444811 ataagctaatttaagtagcttatagcttatcacttt 28444776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 164
Target Start/End: Original strand, 41470027 - 41470155
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg 135  Q
    ||||||||||||||||| ||| | ||||||||| |||||| | ||||||||||||  |||||||||||| |||| ||| |  |||| |||| | |||||     
T  41470027 ttatagcttataagctcatataactaaaaaagacccgtttggtaactgtcattttctcacgagcttataacttaattttactagctcatagtgttttttt 41470126  T
Q  136 ataagctaattcaagtagcctatagctta 164  Q
    ||||||||| ||||||||| |||||||||    
T  41470127 ataagctaactcaagtagcttatagctta 41470155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 43408671 - 43408750
Alignment:
Q  228 attttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    ||||||||||||||||| ||| |||||||| |||||   |||||||||||||||| ||||||||||||| |||||||||||    
T  43408671 attttttgtcatttcatattt-ataagctagttcaattactaattttaccaaacactacaaattcaatcggctagcttatc 43408750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 42 - 153
Target Start/End: Complemental strand, 38289008 - 38288897
Alignment:
Q  42 cttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagc 141  Q
    ||||||||||  | ||| ||||||| || ||||||| |||  |||||||| || |||||||||| ||||||| || |||||||| | |||| ||||||||    
T  38289008 cttataagcttatttgactaaaaaaaattcgtttcgtaacaatcattttttcatgagcttatagattatttttataagcttataactgtttgtgataagc 38288909  T
Q  142 taattcaagtag 153  Q
    ||||||||||||    
T  38288908 taattcaagtag 38288897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 13896050 - 13895934
Alignment:
Q  79 aactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagc-------ttagcacttt 171  Q
    |||||||||| ||| | ||||||||| |||||||||||||| ||||||  |||||||||||| ||||||||||| | |||| |       ||| ||||||    
T  13896050 aactgtcattattaaatgagcttataacttattttcatgagtttatagttgtttttgataagttaattcaagtaacttataactcaaaatttatcacttt 13895951  T
Q  172 ttatctcaattttatcc 188  Q
    |||||||||||||||||    
T  13895950 ttatctcaattttatcc 13895934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 2111012 - 2111091
Alignment:
Q  228 attttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    ||||| ||||||||||| ||| |||||||| ||||| |||||||||||||||||| | ||||||||||||| || ||||||    
T  2111012 attttatgtcatttcatattt-ataagctagttcaaccgctaattttaccaaacactgcaaattcaatcagttatcttatc 2111091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 164
Target Start/End: Complemental strand, 18892400 - 18892296
Alignment:
Q  60 taaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctata 159  Q
    ||||||||| | |||||| ||| |||||||| ||||||||||  | ||||| || |  ||||||||||| ||| ||||||||||||||||||||| ||||    
T  18892400 taaaaaagacctgtttcgtaaccgtcattttcacacgagcttccaacttatatttactagcttatagcgctttctgataagctaattcaagtagcttata 18892301  T
Q  160 gctta 164  Q
     ||||    
T  18892300 tctta 18892296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 177
Target Start/End: Complemental strand, 25019744 - 25019620
Alignment:
Q  53 gtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagta 152  Q
    |||||||||||||| ||  |||| | |||||| ||||||| ||||| ||||| ||| |||| |||||||||||   | || |||||| ||||||||||||    
T  25019744 gtatgattaaaaaatatttgtttggtaactgttatttttaaacgagattataacttctttttatgagcttatatgagcttatgataatctaattcaagta 25019645  T
Q  153 gcctatagcttagcactttttatct 177  Q
    || ||||||||   |||||||||||    
T  25019644 gcttatagcttgtaactttttatct 25019620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 37740624 - 37740675
Alignment:
Q  113 tcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    |||||||||||||||||||||||||| |||||| |||||||| |||||||||    
T  37740624 tcatgagcttatagcggtttttgatatgctaatccaagtagcttatagctta 37740675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 301
Target Start/End: Complemental strand, 12524656 - 12524602
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagcta 301  Q
    |||||||| ||||||||  ||||||||||||||||| ||||||||||||||||||    
T  12524656 tttataagttacttcaacggctaattttaccaaacactacaaattcaatcagcta 12524602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 164
Target Start/End: Original strand, 14243110 - 14243236
Alignment:
Q  38 atagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgat 137  Q
    |||||||||||||| |||||| ||||||||| |  ||  | || ||| |||||| ||| | || ||| |||||||| |||| |||||| |||||||||||    
T  14243110 atagcttataagcttgtatgactaaaaaagacctattcagtaattgttattttttcacaaactaataacttatttttatgaacttatatcggtttttgat 14243209  T
Q  138 aagctaattcaagtagcctatagctta 164  Q
    ||||||||| || |||  |||||||||    
T  14243210 aagctaattgaaatagtttatagctta 14243236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 21367133 - 21367061
Alignment:
Q  254 gctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctactatcagaaataagcta 327  Q
    |||||||||| |||||||||||||||||| |||||| |||||||| ||||||||| | ||||||  ||||||||    
T  21367133 gctacttcaatcgctaattttaccaaacactacaaa-tcaatcagttagcttatccattatcagctataagcta 21367061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 314
Target Start/End: Original strand, 35764723 - 35764807
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctactat 314  Q
    |||| ||||||||||| ||| |||| ||| ||||| |||||||||||||||||| | |||||||||||| |||| ||||| |||||    
T  35764723 ttttatgtcatttcatattt-ataaactagttcaaccgctaattttaccaaacactgcaaattcaatcaactagattatcaactat 35764807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 13544193 - 13544129
Alignment:
Q  86 atttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaag 150  Q
    ||||||||||||| |||||||||||||  ||||| ||||||  |||| |||||||||||||||||    
T  13544193 atttttacacgagtttatagcttatttgtatgagtttatagtagtttgtgataagctaattcaag 13544129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 13680280 - 13680344
Alignment:
Q  86 atttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaag 150  Q
    ||||||||||||| |||||||||||||  ||||| ||||||  |||| |||||||||||||||||    
T  13680280 atttttacacgagtttatagcttatttgtatgagtttatagtagtttgtgataagctaattcaag 13680344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 32467840 - 32467773
Alignment:
Q  96 gagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    |||||||||||||||||| |  |||||||||  ||||||||||||| |||||||||||| |||||||||    
T  32467840 gagcttatagcttatttttactagcttatagtcgtttttgataagc-aattcaagtagcttatagctta 32467773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 164
Target Start/End: Original strand, 43408488 - 43408615
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg 135  Q
    ||||||||||| || || || || |||||||||  ||||| | |||  |||||||  || ||||||||| ||||||||||  || | |||||  ||||||    
T  43408488 ttatagcttattagttcatacgactaaaaaagagtcgtttggtaaccatcattttctcatgagcttataacttattttcactagataatagca-tttttg 43408586  T
Q  136 ataagctaattcaagtagcctatagctta 164  Q
    ||||||||||||||||||| |||||||||    
T  43408587 ataagctaattcaagtagcatatagctta 43408615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 308
Target Start/End: Complemental strand, 28947387 - 28947309
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    |||| ||||||||||| ||| |||||||| ||||| | | |||||||| ||||| | |||||||||||||||||||||||    
T  28947387 ttttatgtcatttcatattt-ataagctagttcaaccacaaattttactaaacactgcaaattcaatcagctagcttatc 28947309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 925997 - 926058
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    ||||||||||  ||||| | || |||||||||||||  ||||||||||||||||||||||||    
T  925997 tttataagctggttcaaccactcattttaccaaacacaacaaattcaatcagctagcttatc 926058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 3346312 - 3346223
Alignment:
Q  96 gagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||||||| |||| ||| |||||||| |||   |||| ||||||||||||||| | |  | ||||||| ||||||||||||||||||||    
T  3346312 gagcttataacttagttttatgagcttgtagtatttttcgataagctaattcaaattgtttgtagcttatcactttttatctcaatttta 3346223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 12525183 - 12525138
Alignment:
Q  158 tagcttagcactttttatctcaattttatccctacaatcttgatta 203  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||||    
T  12525183 tagcttatcactttttatctcaattttacccctacaatcttaatta 12525138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 14911858 - 14911902
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  14911858 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 14911902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 25100221 - 25100177
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  25100221 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 25100177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 25100339 - 25100383
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  25100339 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 25100383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 35057304 - 35057264
Alignment:
Q  113 tcatgagcttatagcggtttttgataagctaattcaagtag 153  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  35057304 tcatgagcttatagcgatttttgaaaagctaattcaagtag 35057264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 36859321 - 36859365
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  36859321 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 36859365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 37740763 - 37740823
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttat 307  Q
    |||| |||||| |||||  ||||||| || |||||| ||||||||||||||||||||||||    
T  37740763 tttaaaagctagttcaacagctaattgtatcaaacactacaaattcaatcagctagcttat 37740823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 40529594 - 40529638
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  40529594 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 40529638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 43800775 - 43800731
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  43800775 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 43800731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 24523902 - 24523835
Alignment:
Q  97 agcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    |||||||| |||||||| |  |||||| || ||||||||||| ||| ||||||||||| |||||||||    
T  24523902 agcttataacttatttttactagcttagagaggtttttgatatgctgattcaagtagcttatagctta 24523835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 27316743 - 27316672
Alignment:
Q  93 cacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    |||||| ||||| |||||||| || ||||||||||  |||||| |||| ||||||||||||  |||||||||    
T  27316743 cacgagtttatatcttatttttattagcttatagcattttttggtaagttaattcaagtagtttatagctta 27316672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 28444727 - 28444672
Alignment:
Q  253 agctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    |||||||||||  ||||||||| ||||| ||||||||||||| || ||||||||||    
T  28444727 agctacttcaactgctaattttcccaaatattacaaattcaaacaactagcttatc 28444672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 307
Target Start/End: Original strand, 29861519 - 29861558
Alignment:
Q  268 taattttaccaaacattacaaattcaatcagctagcttat 307  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  29861519 taattttaccaaacactacaaattcaatcaactagcttat 29861558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 160
Target Start/End: Original strand, 2595231 - 2595273
Alignment:
Q  118 agcttatagcggtttttgataagctaattcaagtagcctatag 160  Q
    ||||||||| | ||||||||||||||||||||||||| |||||    
T  2595231 agcttatagtgttttttgataagctaattcaagtagcatatag 2595273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 14354661 - 14354543
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg 135  Q
    |||||| |||||||||| ||||| ||||||||| || ||| | ||| ||| ||||    |||||| |||| ||||||| |  ||||||||||| |||||     
T  14354661 ttatagtttataagctcatatgactaaaaaagacccatttggtaacagtcgttttctgtcgagctaatagtttatttttactagcttatagcgttttttt 14354562  T
Q  136 ataagctaattcaagtagc 154  Q
    |||||| || |||||||||    
T  14354561 ataagccaactcaagtagc 14354543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 29512807 - 29512852
Alignment:
Q  118 agcttatagcggtttttgataagctaattcaagtagcctatagctta 164  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||||    
T  29512807 agcttatagcggttttt-ataagctaattcaagtagattatagctta 29512852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 8407585 - 8407637
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaaca 282  Q
    |||| ||||||||||| ||| |||||||| ||||| ||||||||||||||||||    
T  8407585 ttttatgtcatttcatattt-ataagctagttcaaccgctaattttaccaaaca 8407637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 13544059 - 13544014
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattc 292  Q
    ||||||| | ||||||| |||||||||||| |||||||||||||||    
T  13544059 tttataaacaacttcaaccgctaattttactaaacattacaaattc 13544014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 13680414 - 13680459
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattc 292  Q
    ||||||| | ||||||| |||||||||||| |||||||||||||||    
T  13680414 tttataaacaacttcaaccgctaattttactaaacattacaaattc 13680459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 13969985 - 13970072
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttata 125  Q
    ||||||||||||||||||| |||| ||||||| || |||| |  |||||| |||   ||||||||||||||||| ||||| |||||||||    
T  13969985 ttatagcttataagctcgtttgatcaaaaaagctctgttt-ggtactgtcttttcaccacgagcttatagctta-tttcacgagcttata 13970072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 308
Target Start/End: Complemental strand, 33583953 - 33583892
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    ||||||||||| ||||   | ||||||||||||||  |||||||||||||| ||||||||||    
T  33583953 tttataagctagttcagctgttaattttaccaaacgctacaaattcaatcaactagcttatc 33583892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 35764593 - 35764650
Alignment:
Q  96 gagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtag 153  Q
    |||||||||||||||||| |  ||||| || || ||||| ||||||||||||||||||    
T  35764593 gagcttatagcttatttttacaagcttgtaacgtttttttataagctaattcaagtag 35764650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 3346162 - 3346102
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttat 307  Q
    |||||||| || | ||| || |||||||| || |||||||||||||||||| |||||||||    
T  3346162 tttataagttattccaaccgttaattttatcatacattacaaattcaatcaactagcttat 3346102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 20697512 - 20697468
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||||||||||||||| || ||||||| |||||| ||||||||||    
T  20697512 ttttcatgagcttataacgttttttgaaaagctatttcaagtagc 20697468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 29861347 - 29861430
Alignment:
Q  101 tatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||||||||||| |  || | ||||||  |||||||||||||||| || |||| ||||||||| || ||||| |||||||||||    
T  29861347 tatagcttatttttactagttcatagcgtattttgataagctaattgaattagcttatagcttatca-tttttctctcaatttta 29861430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 36049728 - 36049660
Alignment:
Q  117 gagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||||||| || ||||| ||||||||||| ||||| | ||||| ||| || | |||||||||||||||    
T  36049728 gagcttataacgtttttttataagctaatttaagtaacttatagtttatcattatttatctcaatttta 36049660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 45237799 - 45237755
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||| ||||||||||| ||||||| |||||| ||||||||||    
T  45237799 ttttcattagcttatagcgttttttgaaaagctatttcaagtagc 45237755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 60 - 198
Target Start/End: Complemental strand, 50011 - 49873
Alignment:
Q  60 taaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctata 159  Q
    ||||||||| |||||| | ||| |||| |||  ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| ||||    
T  50011 taaaaaagacccgtttggtaacggtcactttctcacgagcttatagcttatttttaagagcttatagcggtttgtgataagctaattcaagtagcttata 49912  T
Q  160 gcttagcactttttatctcaattttatccctacaatctt 198  Q
    ||||| |||||||||||||||||||| || | |||||||    
T  49911 gcttatcactttttatctcaattttacccttgcaatctt 49873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 6e-31; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 31 - 280
Target Start/End: Original strand, 883677 - 883930
Alignment:
Q  31 atggtttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggt 130  Q
    |||| ||||||| |||||||| |||||||| || ||||  | |||   ||||| |||||||||||||||||||| ||||||||||||||| |||||  ||    
T  883677 atggcttatagcatataagcttgtatgattgaacaagactcatttgataactgacatttttacacgagcttataacttattttcatgagcatatagaagt 883776  T
Q  131 ttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatcttgatt---agnnnnnnntattaattaaatgcac 227  Q
    || ||||||| ||||||||||||  ||||| ||| ||||||||||||| |||||| |||| ||||| | |||   |        || |||||||||||||    
T  883777 ttctgataagttaattcaagtagtttatagtttatcactttttatctccattttacccctgcaatcctaattgaaaaaaataaatactaattaaatgcac 883876  T
Q  228 attttt--tgtcatttcatcttttataagctacttcaaacgctaattttaccaaa 280  Q
    ||||||  |||||||||||  ||||||||||||||||| || |||||||| ||||    
T  883877 attttttatgtcatttcat-atttataagctacttcaaccgttaattttatcaaa 883930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 31 - 280
Target Start/End: Original strand, 1243006 - 1243259
Alignment:
Q  31 atggtttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggt 130  Q
    |||| ||||||| |||||||| |||||||| || ||||  | |||   ||||| |||||||||||||||||||| ||||||||||||||| |||||  ||    
T  1243006 atggcttatagcatataagcttgtatgattgaacaagactcatttgataactgacatttttacacgagcttataacttattttcatgagcatatagaagt 1243105  T
Q  131 ttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatcttgatt---agnnnnnnntattaattaaatgcac 227  Q
    || ||||||| ||||||||||||  ||||| ||| ||||||||||||| |||||| |||| ||||| | |||   |        || |||||||||||||    
T  1243106 ttctgataagttaattcaagtagtttatagtttatcactttttatctccattttacccctgcaatcctaattgaaaaaaataaatactaattaaatgcac 1243205  T
Q  228 attttt--tgtcatttcatcttttataagctacttcaaacgctaattttaccaaa 280  Q
    ||||||  |||||||||||  ||||||||||||||||| || |||||||| ||||    
T  1243206 attttttatgtcatttcat-atttataagctacttcaaccgttaattttatcaaa 1243259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 197
Target Start/End: Original strand, 3836882 - 3837046
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg 135  Q
    ||||||||||||||||| ||||| | ||||||| || | | | || ||||||||   |||||||||||||||||| ||||||  ||||||||| |||||     
T  3836882 ttatagcttataagctcctatgacttaaaaagacccatatagtaa-tgtcatttcatcacgagcttatagcttatgttcatgttcttatagcgttttttc 3836980  T
Q  136 ataagctaattcaagtagc----ctatagcttagcactttttatctcaattttatccctacaatct 197  Q
     ||||||||||||||||||     |||||||||   |||||||||||||||||| |||| ||||||    
T  3836981 ctaagctaattcaagtagcttaattatagcttatagctttttatctcaattttacccctgcaatct 3837046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 72 - 160
Target Start/End: Original strand, 25659420 - 25659508
Alignment:
Q  72 gtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatag 160  Q
    |||| |||||| ||||||||| || | ||||||||||||||||||||||||| |  |||||| |||||||||||||||||||| |||||    
T  25659420 gtttggcaactttcatttttagacaaacttatagcttattttcatgagcttacaatggttttcgataagctaattcaagtagcttatag 25659508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 174
Target Start/End: Complemental strand, 28175708 - 28175581
Alignment:
Q  47 aagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaatt 146  Q
    ||||||||||||  | |||||| || ||| |  |||||||||||   | ||| |||||||||||||| |||||||||||||  | ||||||||||||| |    
T  28175708 aagctcgtatgacgacaaaagacccatttggttactgtcattttctaatgagtttatagcttatttttatgagcttatagctttctttgataagctaact 28175609  T
Q  147 caagtagcctatagcttagcacttttta 174  Q
    |||||||| ||||||||| |||||||||    
T  28175608 caagtagcttatagcttatcacttttta 28175581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 18654819 - 18654709
Alignment:
Q  42 cttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagc 141  Q
    ||||||||||| | |||||||||||||| | |||   ||| ||||||||  || ||| |||||| ||||||| ||||||||||||  |||| ||||||||    
T  18654819 cttataagctcatttgattaaaaaagattcctttgataacggtcattttctcatgagtttatagattatttttatgagcttatagttgtttgtgataagc 18654720  T
Q  142 taattcaagta 152  Q
    |||||||||||    
T  18654719 taattcaagta 18654709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 2525304 - 2525365
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    ||||||||||| ||||   ||||||||||||||||| |||||||||||||||||||||||||    
T  2525304 tttataagctagttcagctgctaattttaccaaacaatacaaattcaatcagctagcttatc 2525365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 44235569 - 44235513
Alignment:
Q  96 gagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagta 152  Q
    |||||||||||||||||| |||||||||||| | ||||||||||| |||||||||||    
T  44235569 gagcttatagcttattttaatgagcttatagtgttttttgataagttaattcaagta 44235513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 153
Target Start/End: Original strand, 18654096 - 18654206
Alignment:
Q  42 cttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagc 141  Q
    ||||||||||  | ||| |||||||||| ||||  | ||| ||||||||| || ||| |||||| ||||||| || |||||||||| |||| ||||||||    
T  18654096 cttataagcttatttgactaaaaaagattcgttg-gtaacagtcattttttcatgagtttatagattatttttataagcttatagctgtttctgataagc 18654194  T
Q  142 taattcaagtag 153  Q
    ||||||||||||    
T  18654195 taattcaagtag 18654206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 316
Target Start/End: Complemental strand, 44235366 - 44235297
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctactatca 316  Q
    |||||||||||||||||  | ||| ||||||||||| |||||||| ||||||||| ||||||| ||||||    
T  44235366 tttataagctacttcaacggttaactttaccaaacactacaaattaaatcagctaacttatctgctatca 44235297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 297
Target Start/End: Original strand, 30046441 - 30046523
Alignment:
Q  216 aattaaatgcaca-ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatca 297  Q
    ||||||||||||| |||||| |||||| || |||||||| | ||||||| | |||||||||||||||| || ||||| |||||    
T  30046441 aattaaatgcacaattttttatcatttaattttttataaacaacttcaatctctaattttaccaaacaatataaatttaatca 30046523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 44818814 - 44818856
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagta 152  Q
    ||||||| ||||||||||| |||||||||||||||||||||||    
T  44818814 ttttcattagcttatagcgttttttgataagctaattcaagta 44818856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 316
Target Start/End: Original strand, 7379568 - 7379636
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctactatca 316  Q
    |||||||| || ||||| || ||||||||||||||||| |||| ||||||||||| |||||| |||||||    
T  7379568 tttataagttaattcaatcg-taattttaccaaacattgcaaactcaatcagctaacttatccactatca 7379636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 316
Target Start/End: Original strand, 42967964 - 42968005
Alignment:
Q  275 accaaacattacaaattcaatcagctagcttatctactatca 316  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  42967964 accaaacattacaaattcaatcggctagcttatctgctatca 42968005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 87326 - 87266
Alignment:
Q  130 tttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccct 190  Q
    |||| |||||||||||||||||||| || |||||| || | ||||||||||||||| ||||    
T  87326 ttttagataagctaattcaagtagcttaaagcttaacaatatttatctcaattttacccct 87266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 2525172 - 2525239
Alignment:
Q  117 gagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||||||||| |||||||||||||||||  ||||||| ||||| ||| || ||||| |||||||||||    
T  2525172 gagcttatagcagtttttgataagctaatctaagtagcttatag-ttatcattttttctctcaatttta 2525239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 3837099 - 3837143
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaatt 291  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||    
T  3837099 tttataagctacttcaacggctaattttaccaaacactacaaatt 3837143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 12473630 - 12473526
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg 135  Q
    |||| |||||||||||| | ||| ||||||||| |||||| | ||| || |||||  || |||||||||||||||||| |  ||||| ||||| |||||     
T  12473630 ttatggcttataagctcatttgactaaaaaagacccgtttggtaaccgtaattttctcatgagcttatagcttatttttactagcttgtagcgttttttt 12473531  T
Q  136 ataag 140  Q
    |||||    
T  12473530 ataag 12473526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 15050826 - 15050918
Alignment:
Q  93 cacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    |||||||||||||| |||||| |   ||||||||||  ||||||| | |||||||||||||| || |||||| |  ||||||| |||||||||    
T  15050826 cacgagcttatagcatatttttacttgcttatagcgtcttttgatgaactaattcaagtagcttaaagcttatcgttttttatgtcaatttta 15050918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 19683517 - 19683450
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatca 297  Q
    |||||||||||||||| ||| || || |||||||| ||||| ||||| |||||| ||||||||||||||    
T  19683517 ttttttgtcatttcatattt-attagttacttcaaccgctatttttatcaaacactacaaattcaatca 19683450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 27826802 - 27826846
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  27826802 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 27826846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 29994222 - 29994178
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  29994222 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 29994178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 42329029 - 42328985
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  42329029 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 42328985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 42967762 - 42967822
Alignment:
Q  115 atgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttat 175  Q
    ||||||||||| || |||| |||||||||||||||||||| || |||||| |||| |||||    
T  42967762 atgagcttataacgtttttcgataagctaattcaagtagcttaaagcttatcactatttat 42967822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 46672599 - 46672643
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  46672599 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 46672643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 34838530 - 34838459
Alignment:
Q  82 tgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtag 153  Q
    |||||||||||||  |||||||| |||||||| || || ||||  |||||||||||||  ||||||||||||    
T  34838530 tgtcatttttacaaaagcttatatcttatttttataagtttatgacggtttttgataaattaattcaagtag 34838459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 308
Target Start/End: Original strand, 37869119 - 37869178
Alignment:
Q  249 tataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    ||||||||||||||||||| ||||| | |||||| |||||||| |||||| ||| |||||    
T  37869119 tataagctacttcaaacgccaatttcatcaaacagtacaaatttaatcagttagattatc 37869178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 15050986 - 15051040
Alignment:
Q  250 ataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagct 304  Q
    |||||||| ||||| | |||||||||||||||| |  ||||||||||||||||||    
T  15050986 ataagctagttcaaccactaattttaccaaacactctaaattcaatcagctagct 15051040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 43911154 - 43911088
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctacta 313  Q
    |||||||| || ||||| | || ||||||||||| | |||||||||||||| |||||| ||||||||    
T  43911154 tttataagttagttcaaccactgattttaccaaatactacaaattcaatcatctagctaatctacta 43911088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 25696129 - 25696170
Alignment:
Q  113 tcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||||||||||||||| ||||||| ||| |||||||||||||    
T  25696129 tcatgagcttatagcgttttttgagaagttaattcaagtagc 25696170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 30046310 - 30046374
Alignment:
Q  94 acgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctata 159  Q
    ||||||||||| ||||||||  |||| ||||| |||||| ||||||| ||||||||||||| ||||    
T  30046310 acgagcttataacttattttt-tgagtttataacggtttgtgataagttaattcaagtagcttata 30046374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 316
Target Start/End: Original strand, 31740598 - 31740666
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctactatca 316  Q
    |||||||| || ||||| || ||||||||||||||| | |||||||||| ||||| ||||||| ||||||    
T  31740598 tttataagttaattcaatcg-taattttaccaaacactgcaaattcaataagctaacttatctgctatca 31740666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 46349887 - 46349846
Alignment:
Q  113 tcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||||||||||||||| ||||||| |||||| ||||||||||    
T  46349887 tcatgagcttatagcgttttttgaaaagctatttcaagtagc 46349846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 4060449 - 4060489
Alignment:
Q  114 catgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||| ||||||| |||||| ||||||||||    
T  4060449 catgagcttatagcgttttttgaaaagctatttcaagtagc 4060489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 13438488 - 13438420
Alignment:
Q  122 tatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccct 190  Q
    ||||||| ||||| ||||| ||||||||||| | ||||||||| ||  ||||||| |||||||| ||||    
T  13438488 tatagcgtttttttataagataattcaagtaacttatagcttatcatattttatcacaattttacccct 13438420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 15568751 - 15568811
Alignment:
Q  93 cacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtag 153  Q
    ||||| |||||| |||||||| |||||||  || || ||||| ||||||||||||||||||    
T  15568751 cacgaacttataacttatttttatgagctcgtatcgctttttaataagctaattcaagtag 15568811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 19087268 - 19087312
Alignment:
Q  81 ctgtcatttttacacgagcttatagcttattttcatgagcttata 125  Q
    |||||||||||| |||||||||||  | |||||||||||||||||    
T  19087268 ctgtcatttttatacgagcttataattcattttcatgagcttata 19087312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 24580971 - 24581039
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttata 104  Q
    |||||| ||||| |||||||||||||||||||||  |||| | || ||||||| ||||| ||| |||||    
T  24580971 ttatagattatatgctcgtatgattaaaaaagatatgtttggtaagtgtcattcttacaagagtttata 24581039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 327
Target Start/End: Complemental strand, 28175491 - 28175415
Alignment:
Q  251 taagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatctactatcagaaataagcta 327  Q
    ||||||||||||| |||||||| || |||||| ||||||||||  || |||||| |||  |||||||  ||||||||    
T  28175491 taagctacttcaaccgctaattatatcaaacactacaaattcagccaactagctgatccgctatcagctataagcta 28175415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 28494282 - 28494238
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| ||||||  |||||||||    
T  28494282 ttttcatgagcttatagcgttttttgaaaagctatatcaagtagc 28494238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 28958128 - 28958084
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||||||||||||||| || ||||||| |||||| ||||||||||    
T  28958128 ttttcatgagcttataacgttttttgaaaagctatttcaagtagc 28958084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 31031900 - 31031856
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||| ||||||||||| ||||||| |||||| ||||||||||    
T  31031900 ttttcataagcttatagcgttttttgaaaagctatttcaagtagc 31031856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 33982313 - 33982277
Alignment:
Q  118 agcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  33982313 agcttatagcgttttttgataagctatttcaagtagc 33982277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 42265279 - 42265239
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaag 150  Q
    ||||||||||||||||||| ||||||| |||||| ||||||    
T  42265279 ttttcatgagcttatagcgttttttgaaaagctatttcaag 42265239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 42328170 - 42328126
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||| |||||||||||||| ||||||| |||||| ||||||||||    
T  42328170 tttttatgagcttatagcgttttttgaaaagctatttcaagtagc 42328126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 43544894 - 43544858
Alignment:
Q  118 agcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  43544894 agcttatagcgctttttgataagctatttcaagtagc 43544858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 46350842 - 46350798
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| || ||| ||||||||||    
T  46350842 ttttcatgagcttatagcgttttttgaaaaactatttcaagtagc 46350798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 46536215 - 46536259
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||| ||| |||||| ||||||||||    
T  46536215 ttttcatgagcttatagcgttttctgaaaagctatttcaagtagc 46536259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 46615685 - 46615641
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||||||||||||||| || ||||||| |||||| ||||||||||    
T  46615685 ttttcatgagcttataacgttttttgaaaagctatttcaagtagc 46615641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 166742 - 166814
Alignment:
Q  234 tgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttat 307  Q
    ||||||||||| ||| |||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  166742 tgtcatttcatattt-ataagctagttcaaccgctaattttaccaaacactacaaattcaatcagctagcttat 166814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 166590 - 166680
Alignment:
Q  93 cacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    |||||||||||| |||||||| |  |||||||||||  ||||||||||||||| |||||||||||||||||| ||   |||||||| ||||||    
T  166590 cacgagcttataacttatttttactagcttatagcg--ttttgataagctaatccaagtagcctatagcttatcatcatttatctctatttta 166680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 5976572 - 5976720
Alignment:
Q  36 ttatagcttataagctcgtatgattaaaaaagatccgtttcgcaactgtcatttttacacgagcttatagcttattttcatgagcttatagcggtttttg 135  Q
    |||||||||||||| | ||||||||||||||||  | ||| | ||||||||||| ||||||| ||| || |||||||||| ||| |||||||| | ||||    
T  5976572 ttatagcttataagtttgtatgattaaaaaagacacatttggtaactgtcatttgtacacgaacttctaacttattttcaggagtttatagcgatctttg 5976671  T
Q  136 ataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||||| |||| |||||  ||||  | | ||||| ||||||||||||||    
T  5976672 ataagct-attcgagtagtttataaatgatcacttgttatctcaatttta 5976720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 295
Target Start/End: Original strand, 1288292 - 1288501
Alignment:
Q  84 tcatttttacacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattt 183  Q
    ||||||||||||||| | |||||||||| |||||||||||||  | ||||||||||| ||||||||||| | |||  |||  ||||||||||||  ||||    
T  1288292 tcatttttacacgagttcatagcttattctcatgagcttataatgttttttgataagttaattcaagtatcttattacttgtcactttttatcttcattt 1288391  T
Q  184 tatcc-ctacaatcttgattagnnnnnnntattaattaaatgcacattttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaaca 282  Q
    || || |||||||||| |||         ||||||||||||  | ||||| |||||||||||  |||||||| || ||||| || |||||||| ||||||    
T  1288392 tacccgctacaatcttaatt--gaaaatatattaattaaattaatattttatgtcatttcat-atttataagttatttcaaccgttaattttatcaaaca 1288488  T
Q  283 ttacaaattcaat 295  Q
     |||||| |||||    
T  1288489 ctacaaaatcaat 1288501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 29052677 - 29052773
Alignment:
Q  212 tattaattaaatgcacattttt-tgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    ||||||||||||  | |||||| ||||||||||| ||| ||||||||  | || |||| ||||||||||||| | |||||||||||||||||||||||    
T  29052677 tattaattaaatatatatttttatgtcatttcatattt-ataagctaggtgaaccgcttattttaccaaacactgcaaattcaatcagctagcttatc 29052773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 9749853 - 9749801
Alignment:
Q  255 ctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttat 307  Q
    ||||||||| | |||||||||||||||| |||||||| |||||||||||||||    
T  9749853 ctacttcaaccactaattttaccaaacactacaaattaaatcagctagcttat 9749801  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 3341104 - 3341174
Alignment:
Q  93 cacgagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagcctatagctt 163  Q
    |||||||||||| |||||||| ||||  |||| ||||||| ||||||||||||| ||||||  ||||||||    
T  3341104 cacgagcttataacttatttttatgaaattatggcggtttgtgataagctaattaaagtagattatagctt 3341174  T

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Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 27903958 - 27903901
Alignment:
Q  128 ggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||| |||||||||||||||| |||| |||| |||| || |||||||||||||||||    
T  27903958 ggtttgtgataagctaattcaaatagcttataccttatcagtttttatctcaatttta 27903901  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 724719 - 724767
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaat 295  Q
    ||||||||||||||||| | ||||||||| |||||| ||||||||||||    
T  724719 tttataagctacttcaaccactaattttatcaaacactacaaattcaat 724767  T

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Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 9197270 - 9197214
Alignment:
Q  129 gtttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    ||||||||||| |||||||||||||| ||| | |||  |||||||||||||||||||    
T  9197270 gtttttgataaactaattcaagtagcttattgtttataactttttatctcaatttta 9197214  T

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Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 12130574 - 12130618
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  12130574 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 12130618  T

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Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 17328777 - 17328693
Alignment:
Q  113 tcatgagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatct 197  Q
    |||||||||||||| ||||| |||||| |||||||||||||| |||  || |    ||||||||||||||||| |||| ||||||    
T  17328777 tcatgagcttataggggtttgtgataaactaattcaagtagcttatgcctcactgttttttatctcaattttacccctgcaatct 17328693  T

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Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 21860327 - 21860371
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  21860327 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 21860371  T

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Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 24119245 - 24119201
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  24119245 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 24119201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 724597 - 724652
Alignment:
Q  130 tttttgataagctaattcaagtagcctatagcttagcactttttatctcaatttta 185  Q
    |||||||||||||||||  |||||| |||||| || ||||||||| ||||||||||    
T  724597 tttttgataagctaatttgagtagcttatagcgtatcactttttacctcaatttta 724652  T

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Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 296
Target Start/End: Complemental strand, 8014493 - 8014427
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatc 296  Q
    |||||||||||||||| ||| |||||||| ||| |  ||||||||||||||||| || ||||||||||    
T  8014493 ttttttgtcatttcatgttt-ataagctagttcgactgctaattttaccaaacactataaattcaatc 8014427  T

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Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 25023461 - 25023418
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtag 153  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||    
T  25023461 ttttcatgagcttatagcgttttttgaaaagctatttcaagtag 25023418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 33757760 - 33757725
Alignment:
Q  167 actttttatctcaattttatccctacaatcttgatt 202  Q
    ||||||||||||||||||| ||||||||||||||||    
T  33757760 actttttatctcaattttacccctacaatcttgatt 33757725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 34544422 - 34544500
Alignment:
Q  229 ttttttgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttatc 308  Q
    |||| ||||||||||| ||| |||||||| ||||| | |||||| || |||||| ||||||||||| | |||||||||||    
T  34544422 ttttatgtcatttcatattt-ataagctagttcaaccactaattgtatcaaacactacaaattcaacccgctagcttatc 34544500  T

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Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 154
Target Start/End: Original strand, 16800436 - 16800490
Alignment:
Q  100 ttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||||||||||||| || || |||||| ||||| ||||||||||||| |||||||    
T  16800436 ttatagcttatttttataagtttatagtggtttgtgataagctaattgaagtagc 16800490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 17071804 - 17071862
Alignment:
Q  96 gagcttatagcttattttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||||||||||||||||| || |  |||||| ||||| ||||||||||||| |||||||    
T  17071804 gagcttatagcttatttttataaatttatagtggtttgtgataagctaattgaagtagc 17071862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 20992271 - 20992229
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagta 152  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||    
T  20992271 ttttcatgagcttatagcgttttttgaaaagctatttcaagta 20992229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 5976750 - 5976842
Alignment:
Q  212 tattaattaaatgcacattttt----tgtcatttcatcttttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagcta 301  Q
    ||||||||||||| ||||||||    |||||||| ||  |||||||| ||||||||  || |||||||||||||||| || ||||||| |||||    
T  5976750 tattaattaaatgtacattttttttatgtcattttat-atttataagttacttcaactgcaaattttaccaaacattgcagattcaatgagcta 5976842  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 20645751 - 20645795
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||| |||||||||||||| ||||||| |||||| ||||||||||    
T  20645751 tttttatgagcttatagcgttttttgaaaagctatttcaagtagc 20645795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 339081 - 339001
Alignment:
Q  117 gagcttatagcggtttttgataagctaattcaagtagcctatagcttagcactttttatctcaattttatccctacaatctt 198  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||| ||| ||||||||| |||| | |||| |||||||    
T  339081 gagcttatagcg-tttttgataagctaattcaagtagcttatagcttatcaccttttatctcgatttcacccctgcaatctt 339001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 338967 - 338912
Alignment:
Q  247 tttataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctag 302  Q
    ||||||||||||||||| |||||| | || |||||| |||||||||||||||||||    
T  338967 tttataagctacttcaaccgctaactatatcaaacactacaaattcaatcagctag 338912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 7084 - 7128
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  7084 ttttcatgagcttatagcgttttttgaaaagctatttcaagtagc 7128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 307
Target Start/End: Complemental strand, 84896 - 84838
Alignment:
Q  249 tataagctacttcaaacgctaattttaccaaacattacaaattcaatcagctagcttat 307  Q
    |||||||||||||||  |||||||||| |||| | |||||| ||||| |||||||||||    
T  84896 tataagctacttcaactgctaattttaacaaatactacaaaatcaataagctagcttat 84838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 18469 - 18513
Alignment:
Q  110 ttttcatgagcttatagcggtttttgataagctaattcaagtagc 154  Q
    |||||||||||||||| || ||||||| |||||| ||||||||||    
T  18469 ttttcatgagcttataacgttttttgaaaagctatttcaagtagc 18513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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