View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2771_low_7 (Length: 274)
Name: NF2771_low_7
Description: NF2771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2771_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 32359450 - 32359682
Alignment:
| Q |
26 |
gccaaaactaacttcttcttttcttacatttccctctcaaattcattgtaattccaaacactagaagacttctacatgattgctcgtatttaatttacta |
125 |
Q |
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| T |
32359450 |
gccaaaactaacttcttcttttcttacatttccctctcacattcattgtacttccaaacactagaagacttctacatgattgctcgtatttaatttacta |
32359549 |
T |
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| Q |
126 |
ttaaaagaaacctaaatcttaattacatactgannnnnnnnnnnnnnnnngcaaacaatcttattagcattaaataataatcatcatcatcatcgcaaga |
225 |
Q |
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||||||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
32359550 |
ctaaaagaaacctaaatcctaattgcatactgattttttattttatttttgcaaacaatcttattagcataaaataataatcatcatcatcatcgcaaga |
32359649 |
T |
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| Q |
226 |
aaaacaaacagagtaaatctcaaatagataact |
258 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
32359650 |
aaaacaaacagagtaaatctcaaatagataact |
32359682 |
T |
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