View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2774_low_10 (Length: 249)

Name: NF2774_low_10
Description: NF2774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2774_low_10
NF2774_low_10
[»] chr4 (48 HSPs)
chr4 (138-236)||(34835502-34835600)
chr4 (161-236)||(25852210-25852285)
chr4 (163-236)||(42245744-42245817)
chr4 (161-233)||(40058981-40059053)
chr4 (161-236)||(54127468-54127543)
chr4 (161-236)||(1985832-1985907)
chr4 (161-236)||(13873421-13873496)
chr4 (161-236)||(32986193-32986268)
chr4 (161-232)||(41621726-41621797)
chr4 (161-232)||(46714388-46714459)
chr4 (161-236)||(52983615-52983690)
chr4 (164-233)||(9646345-9646414)
chr4 (161-236)||(13771609-13771684)
chr4 (161-236)||(22625196-22625271)
chr4 (161-236)||(27528921-27528996)
chr4 (161-236)||(33696405-33696480)
chr4 (161-236)||(35674867-35674942)
chr4 (162-212)||(20566346-20566396)
chr4 (1-43)||(34835353-34835395)
chr4 (182-239)||(7392086-7392143)
chr4 (169-234)||(35229172-35229237)
chr4 (163-236)||(51535611-51535684)
chr4 (161-209)||(5609355-5609403)
chr4 (161-233)||(19660661-19660733)
chr4 (161-233)||(34844887-34844959)
chr4 (177-236)||(12710191-12710250)
chr4 (162-233)||(40252295-40252366)
chr4 (163-233)||(43719194-43719264)
chr4 (164-236)||(44343512-44343585)
chr4 (161-221)||(21487091-21487151)
chr4 (164-212)||(32942369-32942417)
chr4 (164-212)||(34722169-34722217)
chr4 (166-233)||(43352453-43352520)
chr4 (165-212)||(55961892-55961939)
chr4 (162-236)||(13584380-13584454)
chr4 (166-236)||(31334545-31334615)
chr4 (163-233)||(41085024-41085094)
chr4 (163-236)||(45787830-45787902)
chr4 (172-236)||(2351020-2351084)
chr4 (161-233)||(33992622-33992694)
chr4 (183-233)||(21344842-21344892)
chr4 (161-239)||(36131633-36131711)
chr4 (183-233)||(37980148-37980198)
chr4 (179-233)||(49287872-49287926)
chr4 (183-233)||(56409976-56410026)
chr4 (162-223)||(13550205-13550266)
chr4 (169-234)||(46932928-46932993)
chr4 (183-235)||(20078111-20078163)
[»] chr8 (55 HSPs)
chr8 (138-234)||(28964010-28964106)
chr8 (161-236)||(3734749-3734824)
chr8 (161-234)||(20305908-20305981)
chr8 (161-234)||(21092541-21092614)
chr8 (161-236)||(18532107-18532182)
chr8 (161-236)||(34237781-34237856)
chr8 (162-236)||(27746461-27746535)
chr8 (164-236)||(28193477-28193549)
chr8 (162-234)||(34694704-34694776)
chr8 (161-236)||(4718645-4718720)
chr8 (161-236)||(19471609-19471684)
chr8 (161-236)||(19542533-19542608)
chr8 (161-236)||(19590088-19590163)
chr8 (172-239)||(21603241-21603308)
chr8 (161-236)||(32879279-32879354)
chr8 (161-236)||(39349256-39349331)
chr8 (162-236)||(15259532-15259606)
chr8 (161-234)||(26168976-26169049)
chr8 (162-223)||(34639345-34639406)
chr8 (161-212)||(2618186-2618237)
chr8 (161-236)||(42643244-42643319)
chr8 (162-232)||(8387574-8387644)
chr8 (1-43)||(28963863-28963905)
chr8 (167-236)||(41070767-41070836)
chr8 (164-236)||(264525-264597)
chr8 (164-236)||(651324-651396)
chr8 (164-236)||(837059-837131)
chr8 (164-232)||(24018385-24018453)
chr8 (162-236)||(3794792-3794866)
chr8 (162-231)||(8042655-8042724)
chr8 (161-205)||(42328005-42328049)
chr8 (161-216)||(7373472-7373527)
chr8 (161-212)||(7558093-7558144)
chr8 (161-236)||(2166697-2166774)
chr8 (182-236)||(14632975-14633029)
chr8 (161-235)||(15974906-15974979)
chr8 (162-212)||(21667551-21667601)
chr8 (161-234)||(3403630-3403703)
chr8 (184-236)||(20469940-20469992)
chr8 (183-235)||(28474270-28474322)
chr8 (163-219)||(28908823-28908879)
chr8 (183-233)||(16317636-16317686)
chr8 (170-232)||(33585757-33585819)
chr8 (164-205)||(775938-775979)
chr8 (164-205)||(781592-781633)
chr8 (161-234)||(13525554-13525627)
chr8 (161-234)||(13615089-13615162)
chr8 (163-236)||(22200686-22200758)
chr8 (169-222)||(35653477-35653530)
chr8 (162-219)||(36848892-36848949)
chr8 (200-236)||(1372527-1372563)
chr8 (171-235)||(11714946-11715010)
chr8 (169-233)||(18897175-18897242)
chr8 (164-232)||(30911387-30911455)
chr8 (208-236)||(39683530-39683558)
[»] chr1 (52 HSPs)
chr1 (161-239)||(32729541-32729619)
chr1 (161-233)||(27454995-27455067)
chr1 (161-236)||(4621363-4621438)
chr1 (161-236)||(7197372-7197447)
chr1 (161-236)||(24674389-24674464)
chr1 (161-236)||(46607806-46607881)
chr1 (161-233)||(8077643-8077715)
chr1 (164-236)||(25496614-25496686)
chr1 (161-236)||(168197-168272)
chr1 (161-236)||(20487316-20487391)
chr1 (161-236)||(23734112-23734187)
chr1 (161-236)||(23741304-23741379)
chr1 (161-236)||(29057463-29057538)
chr1 (161-236)||(34778338-34778413)
chr1 (162-232)||(52135127-52135197)
chr1 (163-232)||(1378743-1378812)
chr1 (161-233)||(15059531-15059603)
chr1 (164-236)||(46113528-46113600)
chr1 (161-236)||(7766853-7766928)
chr1 (161-232)||(24216974-24217045)
chr1 (163-238)||(37349521-37349596)
chr1 (163-236)||(2272342-2272415)
chr1 (163-236)||(24122021-24122094)
chr1 (161-236)||(1486416-1486489)
chr1 (161-236)||(30677172-30677247)
chr1 (177-239)||(7578421-7578483)
chr1 (161-230)||(1138575-1138644)
chr1 (183-236)||(45859169-45859222)
chr1 (161-210)||(47091686-47091735)
chr1 (161-233)||(40802196-40802268)
chr1 (162-210)||(52592557-52592605)
chr1 (169-232)||(809226-809289)
chr1 (164-203)||(1095154-1095193)
chr1 (161-232)||(1378894-1378965)
chr1 (161-236)||(7946840-7946915)
chr1 (161-212)||(14258577-14258628)
chr1 (161-236)||(25237115-25237190)
chr1 (182-236)||(33905636-33905690)
chr1 (180-234)||(37351589-37351643)
chr1 (159-236)||(1818728-1818805)
chr1 (161-222)||(9926288-9926349)
chr1 (164-233)||(18646852-18646921)
chr1 (178-234)||(17935782-17935838)
chr1 (169-233)||(3334778-3334844)
chr1 (161-212)||(18533874-18533925)
chr1 (161-236)||(23232391-23232466)
chr1 (161-234)||(2537700-2537767)
chr1 (169-211)||(6776148-6776190)
chr1 (183-233)||(39714779-39714829)
chr1 (169-235)||(37046994-37047062)
chr1 (183-235)||(19480552-19480604)
chr1 (183-235)||(41470609-41470661)
[»] chr3 (53 HSPs)
chr3 (161-241)||(34492696-34492776)
chr3 (161-236)||(25289840-25289915)
chr3 (161-236)||(30257620-30257695)
chr3 (161-236)||(40940821-40940896)
chr3 (161-236)||(8456276-8456351)
chr3 (161-236)||(30807279-30807354)
chr3 (161-236)||(35492907-35492982)
chr3 (161-236)||(40133575-40133650)
chr3 (161-236)||(45529880-45529955)
chr3 (161-236)||(46576344-46576419)
chr3 (161-232)||(50582988-50583059)
chr3 (161-236)||(53424302-53424377)
chr3 (161-234)||(48977384-48977457)
chr3 (161-236)||(4252522-4252597)
chr3 (161-236)||(7485651-7485726)
chr3 (161-236)||(21362939-21363014)
chr3 (161-236)||(31537964-31538039)
chr3 (161-236)||(52455775-52455850)
chr3 (164-234)||(25379760-25379830)
chr3 (161-236)||(7470341-7470416)
chr3 (161-236)||(49258388-49258463)
chr3 (163-236)||(4462631-4462704)
chr3 (172-236)||(26108299-26108363)
chr3 (164-236)||(52821761-52821833)
chr3 (164-236)||(55371411-55371483)
chr3 (161-212)||(9842917-9842968)
chr3 (172-235)||(9853623-9853686)
chr3 (169-236)||(15566625-15566692)
chr3 (161-232)||(16140293-16140364)
chr3 (161-236)||(45272542-45272617)
chr3 (161-236)||(55287799-55287874)
chr3 (162-212)||(25344207-25344257)
chr3 (166-232)||(26174114-26174180)
chr3 (163-233)||(36660768-36660838)
chr3 (161-236)||(18177013-18177088)
chr3 (177-236)||(51390965-51391024)
chr3 (163-209)||(24703702-24703748)
chr3 (183-233)||(35623267-35623317)
chr3 (162-236)||(53288838-53288912)
chr3 (169-233)||(32151428-32151492)
chr3 (177-233)||(53234039-53234095)
chr3 (163-234)||(27887426-27887497)
chr3 (161-232)||(29915399-29915470)
chr3 (161-232)||(29964552-29964623)
chr3 (184-233)||(40063645-40063695)
chr3 (183-233)||(40268514-40268564)
chr3 (165-231)||(50195410-50195476)
chr3 (163-232)||(6041802-6041871)
chr3 (163-236)||(26158816-26158889)
chr3 (183-236)||(34844396-34844449)
chr3 (164-212)||(11390601-11390649)
chr3 (182-233)||(16900681-16900733)
chr3 (161-233)||(51532785-51532857)
[»] scaffold0576 (1 HSPs)
scaffold0576 (161-236)||(5208-5283)
[»] chr7 (52 HSPs)
chr7 (161-236)||(2751271-2751346)
chr7 (161-236)||(10091188-10091263)
chr7 (161-236)||(2103055-2103130)
chr7 (161-236)||(7175988-7176063)
chr7 (161-236)||(7275277-7275352)
chr7 (161-236)||(11997849-11997924)
chr7 (161-236)||(21217959-21218034)
chr7 (161-236)||(40543036-40543111)
chr7 (163-236)||(13332549-13332622)
chr7 (163-236)||(22119890-22119963)
chr7 (161-233)||(23854396-23854468)
chr7 (164-236)||(27312155-27312227)
chr7 (162-230)||(42031920-42031988)
chr7 (161-236)||(7799958-7800033)
chr7 (161-236)||(18044107-18044182)
chr7 (161-236)||(22638292-22638367)
chr7 (161-236)||(23330865-23330940)
chr7 (161-232)||(40332099-40332170)
chr7 (161-234)||(2344299-2344372)
chr7 (161-209)||(31197591-31197639)
chr7 (161-232)||(19421231-19421302)
chr7 (161-232)||(42913643-42913714)
chr7 (163-236)||(3950914-3950988)
chr7 (162-232)||(8435825-8435895)
chr7 (161-235)||(21574230-21574304)
chr7 (161-235)||(43785426-43785500)
chr7 (163-232)||(577681-577750)
chr7 (163-212)||(28003838-28003887)
chr7 (161-233)||(17212053-17212125)
chr7 (164-236)||(28646972-28647044)
chr7 (164-236)||(42814867-42814939)
chr7 (161-236)||(17197076-17197151)
chr7 (177-236)||(22299865-22299924)
chr7 (161-236)||(25333419-25333494)
chr7 (161-236)||(27009359-27009434)
chr7 (161-212)||(31713045-31713096)
chr7 (161-232)||(37693692-37693763)
chr7 (162-232)||(12211665-12211735)
chr7 (162-236)||(21835152-21835226)
chr7 (178-236)||(22703503-22703561)
chr7 (162-212)||(28089817-28089867)
chr7 (163-222)||(3951130-3951190)
chr7 (161-236)||(21370597-21370672)
chr7 (161-236)||(22264628-22264703)
chr7 (161-212)||(32849591-32849642)
chr7 (162-236)||(9718113-9718187)
chr7 (163-232)||(1469114-1469183)
chr7 (161-212)||(39145802-39145853)
chr7 (162-223)||(9683827-9683888)
chr7 (183-228)||(19612645-19612690)
chr7 (163-208)||(23012662-23012707)
chr7 (163-232)||(27704004-27704073)
[»] chr6 (31 HSPs)
chr6 (161-236)||(12591633-12591708)
chr6 (161-236)||(15360224-15360299)
chr6 (161-235)||(9208248-9208322)
chr6 (162-230)||(9843935-9844003)
chr6 (161-233)||(11007161-11007233)
chr6 (161-236)||(9238971-9239046)
chr6 (161-236)||(33499470-33499546)
chr6 (161-236)||(22576063-22576138)
chr6 (159-232)||(8479306-8479379)
chr6 (165-233)||(11448871-11448939)
chr6 (161-236)||(3222761-3222835)
chr6 (161-236)||(28672063-28672138)
chr6 (161-236)||(34147342-34147417)
chr6 (161-236)||(34159958-34160033)
chr6 (154-236)||(5360197-5360279)
chr6 (161-235)||(21982447-21982521)
chr6 (161-233)||(13753236-13753308)
chr6 (161-236)||(654272-654347)
chr6 (161-212)||(17081204-17081255)
chr6 (181-236)||(17149582-17149637)
chr6 (161-208)||(21148664-21148711)
chr6 (163-236)||(14212890-14212963)
chr6 (161-205)||(33718615-33718659)
chr6 (162-236)||(1344934-1345006)
chr6 (164-239)||(10377714-10377789)
chr6 (178-233)||(28667641-28667696)
chr6 (182-233)||(28968171-28968222)
chr6 (164-234)||(8260486-8260556)
chr6 (179-236)||(11840915-11840972)
chr6 (169-233)||(3907545-3907609)
chr6 (161-221)||(17420861-17420921)
[»] chr5 (52 HSPs)
chr5 (161-236)||(31288072-31288147)
chr5 (161-234)||(32059568-32059641)
chr5 (161-236)||(22392697-22392772)
chr5 (161-236)||(36954814-36954889)
chr5 (162-234)||(4603774-4603846)
chr5 (161-236)||(13038580-13038655)
chr5 (161-236)||(13108575-13108650)
chr5 (161-236)||(15641231-15641306)
chr5 (161-236)||(19145537-19145612)
chr5 (161-232)||(23270652-23270723)
chr5 (161-232)||(25586928-25586999)
chr5 (161-236)||(27498857-27498932)
chr5 (162-236)||(8484787-8484861)
chr5 (162-236)||(38631087-38631161)
chr5 (162-235)||(930612-930685)
chr5 (161-222)||(12317290-12317351)
chr5 (161-234)||(34049818-34049891)
chr5 (162-230)||(22253277-22253345)
chr5 (161-236)||(1827656-1827731)
chr5 (161-236)||(11926628-11926703)
chr5 (169-236)||(33709627-33709694)
chr5 (161-236)||(34310138-34310213)
chr5 (164-235)||(37397712-37397783)
chr5 (182-239)||(12398571-12398628)
chr5 (161-212)||(5067297-5067348)
chr5 (161-235)||(15485418-15485493)
chr5 (161-236)||(38684204-38684279)
chr5 (162-212)||(25750761-25750811)
chr5 (161-239)||(40330629-40330707)
chr5 (163-232)||(15971252-15971321)
chr5 (164-212)||(3715059-3715107)
chr5 (163-223)||(21042664-21042724)
chr5 (161-233)||(30485824-30485896)
chr5 (161-236)||(7085752-7085827)
chr5 (161-208)||(15931055-15931102)
chr5 (161-232)||(28614614-28614684)
chr5 (177-236)||(37495059-37495118)
chr5 (166-232)||(16074042-16074108)
chr5 (161-223)||(33025476-33025538)
chr5 (178-236)||(36895438-36895496)
chr5 (163-209)||(42006791-42006837)
chr5 (167-234)||(10869693-10869760)
chr5 (161-232)||(11465037-11465108)
chr5 (161-232)||(16616115-16616186)
chr5 (162-208)||(10399770-10399816)
chr5 (164-233)||(2499307-2499376)
chr5 (163-232)||(14302829-14302898)
chr5 (183-232)||(14656645-14656694)
chr5 (182-231)||(19456340-19456389)
chr5 (163-236)||(26009390-26009463)
chr5 (165-209)||(204177-204221)
chr5 (184-236)||(18207226-18207278)
[»] chr2 (44 HSPs)
chr2 (161-236)||(8192477-8192552)
chr2 (161-236)||(18976551-18976626)
chr2 (161-236)||(44946179-44946254)
chr2 (161-239)||(11941333-11941411)
chr2 (161-236)||(15037955-15038030)
chr2 (161-236)||(25293162-25293237)
chr2 (161-236)||(33827699-33827774)
chr2 (161-235)||(40997477-40997551)
chr2 (163-236)||(44976280-44976353)
chr2 (161-236)||(27269476-27269551)
chr2 (163-236)||(4852556-4852629)
chr2 (163-236)||(17324764-17324837)
chr2 (161-233)||(30466959-30467031)
chr2 (164-236)||(41329842-41329914)
chr2 (177-236)||(19605971-19606030)
chr2 (177-236)||(27290600-27290659)
chr2 (161-236)||(32526211-32526286)
chr2 (161-236)||(32845087-32845162)
chr2 (161-236)||(41313988-41314063)
chr2 (178-236)||(10582116-10582174)
chr2 (175-233)||(33901512-33901570)
chr2 (167-232)||(4618815-4618880)
chr2 (161-233)||(28194262-28194335)
chr2 (161-232)||(36390698-36390767)
chr2 (159-234)||(19054019-19054094)
chr2 (161-236)||(24196000-24196075)
chr2 (182-236)||(5394034-5394088)
chr2 (161-231)||(31536204-31536274)
chr2 (182-236)||(45271401-45271455)
chr2 (162-211)||(4567588-4567637)
chr2 (161-234)||(6714409-6714482)
chr2 (161-213)||(1845806-1845858)
chr2 (161-232)||(20297559-20297631)
chr2 (164-232)||(38784309-38784377)
chr2 (182-233)||(6099519-6099570)
chr2 (161-232)||(14946775-14946846)
chr2 (163-213)||(918848-918898)
chr2 (182-236)||(43374451-43374505)
chr2 (177-222)||(5861275-5861320)
chr2 (163-236)||(18691980-18692053)
chr2 (182-223)||(29698164-29698205)
chr2 (182-235)||(38341754-38341807)
chr2 (169-235)||(43963987-43964055)
chr2 (181-233)||(34516537-34516589)
[»] scaffold0049 (1 HSPs)
scaffold0049 (161-234)||(66758-66831)
[»] scaffold0028 (1 HSPs)
scaffold0028 (161-236)||(27772-27847)
[»] scaffold0026 (1 HSPs)
scaffold0026 (161-236)||(97492-97567)
[»] scaffold0623 (1 HSPs)
scaffold0623 (163-236)||(1182-1255)
[»] scaffold0366 (2 HSPs)
scaffold0366 (163-236)||(9425-9498)
scaffold0366 (163-232)||(12130-12199)
[»] scaffold0460 (1 HSPs)
scaffold0460 (161-236)||(8305-8380)
[»] scaffold0199 (1 HSPs)
scaffold0199 (161-232)||(8537-8608)
[»] scaffold0068 (1 HSPs)
scaffold0068 (161-236)||(41770-41845)
[»] scaffold0459 (1 HSPs)
scaffold0459 (163-232)||(10823-10892)
[»] scaffold0328 (1 HSPs)
scaffold0328 (161-236)||(14987-15062)
[»] scaffold0070 (1 HSPs)
scaffold0070 (161-236)||(40321-40396)
[»] scaffold0217 (1 HSPs)
scaffold0217 (164-236)||(7435-7507)
[»] scaffold0051 (1 HSPs)
scaffold0051 (161-212)||(53021-53072)
[»] scaffold0717 (1 HSPs)
scaffold0717 (170-236)||(84-150)
[»] scaffold0200 (1 HSPs)
scaffold0200 (161-233)||(26672-26744)
[»] scaffold0019 (1 HSPs)
scaffold0019 (184-236)||(161828-161880)
[»] scaffold0160 (1 HSPs)
scaffold0160 (164-235)||(29269-29340)
[»] scaffold0012 (1 HSPs)
scaffold0012 (183-232)||(240887-240936)
[»] scaffold0240 (1 HSPs)
scaffold0240 (164-212)||(12904-12952)


Alignment Details
Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 34835502 - 34835600
Alignment:
Q  138 gacatcatttagaatgatgagaccccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34835502 gacatcatttagaatgatgagacctcatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 34835600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 25852210 - 25852285
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||    
T  25852210 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 25852285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 42245744 - 42245817
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||  ||||||||||||    
T  42245744 catttggggttggcctagtggttgacttgggatcttagagtttgctcctctaaaggtctcgggttcgattccct 42245817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 40059053 - 40058981
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||  |||||||| |||||||||    
T  40059053 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattc 40058981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 54127543 - 54127468
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||||||||| |||| |||||||    
T  54127543 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccct 54127468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 1985832 - 1985907
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||| |||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  1985832 cccatttgggattggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 1985907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 13873496 - 13873421
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| ||||||||| |||||||||||| ||||||||||||   ||||||||| ||||||||||||    
T  13873496 cccatttggggttggcctagtggtttgcttgggatcttggagtttgctccttcaaaggtctcaggttcgattccct 13873421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 32986193 - 32986268
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| |||| |||||||    
T  32986193 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccct 32986268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 41621797 - 41621726
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||||| ||| ||||||||||| |||||| |||||||||||||| ||||||||||||| ||||    
T  41621797 cccatttggggttggcctaatggttggcttgagatcttggagtttgctcctctcaaggtctcatgtttgatt 41621726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 46714388 - 46714459
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||    
T  46714388 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 46714459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 52983615 - 52983690
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||||||||   |||||||| ||||||||||||    
T  52983615 cccatttggggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccct 52983690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 9646414 - 9646345
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||||| | ||||||||||||| |||||    
T  9646414 atttggggttggtctagtggttggtttgggatctttgagtgtgctcctgtcaaggtctcatgtttgattc 9646345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 13771684 - 13771609
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||||||  ||||||||||||||||||  ||||||||| ||| |||||||||  |||||||||||    
T  13771684 cccatttggggttggtctgatggttggcttgggatcttgaagtttgctcatctcaaggtctcaaattcgattccct 13771609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 22625271 - 22625196
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||| |||||| |||||||||||||||||||||| |||||| ||||||   |||||||| ||||||||||||    
T  22625271 cccatttgaggttggcctagtggttggcttgggatcttggagtttactcctccagaggtctcaggttcgattccct 22625196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 27528996 - 27528921
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||| |||||||||  ||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  27528996 cccatctggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 27528921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 33696480 - 33696405
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||| ||||||| |||||||||||||||||||||| |||||||||||||   |||||||| |||| |||||||    
T  33696480 cccatttagggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccct 33696405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 35674942 - 35674867
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| | |||||||||||||||||||| |||||||||| ||  |||||| || ||||||||||||    
T  35674942 cccatttggggttggccaagtggttggcttgggatcttggagtttgctcttccaaaggtcacaggttcgattccct 35674867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 20566346 - 20566396
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  20566346 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctc 20566396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34835353 - 34835395
Alignment:
Q  1 aacaatacatctagaaatcggaggaccaaaccttacctatagg 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  34835353 aacaatacatctagaaatcggaggaccaaaccttacctatagg 34835395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 7392143 - 7392086
Alignment:
Q  182 ggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctatg 239  Q
    ||||||||||||||||| |||||||||||||  ||||||||| |||||||||||||||    
T  7392143 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatg 7392086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 35229172 - 35229237
Alignment:
Q  169 gggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    ||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||    
T  35229172 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 35229237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 51535611 - 51535684
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||| ||||||| |||||||||| ||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  51535611 catttagggttggcctagtggttgacttgggatcttggagtttgctcctccacaggtctcaggttcgattccct 51535684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 5609403 - 5609355
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctc 209  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  5609403 cccatttggggttggcctagtggttggcttgggatcttggagtttgctc 5609355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 19660733 - 19660661
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||| |||||    
T  19660733 cccatttggagttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattc 19660661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 34844959 - 34844887
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||||||||| ||||||||| ||||| |||||| |||||||||||||   |||||||| |||||||||    
T  34844959 cccatttggggttggcctagtggtttgcttgagatcttggagtttgctcctccagaggtctcaggttcgattc 34844887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 12710191 - 12710250
Alignment:
Q  177 ctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||| |||||||||| |||| |||| |||||||||||||| ||||||||||||    
T  12710191 ctagtggttggtttgggatcttggagtatgcttctcttaaggtctcaggttcgattccct 12710250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 40252295 - 40252366
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||||||||||| |||| ||||| ||||| |||| |||| |||| ||||||||| |||||||||    
T  40252295 ccatttggggttggtctagtagttgacttggaatcttggagtgtgcttctctcaaggtctcaagttcgattc 40252366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 43719264 - 43719194
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||   |||| ||| |||||||||    
T  43719264 catttggggttggtctagtggttggtttgagatcttggagtttgctcctccagaggtttcaggttcgattc 43719194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 44343512 - 44343585
Alignment:
Q  164 atttggggttggtctagtggtt-ggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||||||| |  |||| |||| ||||||||||||    
T  44343512 atttggggttgggctagtggtttggcttgggatcttggagtttgctcccccaaaggactcaagttcgattccct 44343585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 21487151 - 21487091
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtct 221  Q
    |||||||||| |||||||| || ||||||| |||||||||||| ||||||||| |||||||    
T  21487151 cccatttgggtttggtctattgattggcttaggatcttagagtgtgctcctctcaaggtct 21487091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 32942369 - 32942417
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||||    
T  32942369 atttggggttggtctagtggttggcttgagatcttggagtttactcctc 32942417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 34722169 - 34722217
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||||    
T  34722169 atttggggttggcttagtggttggcttgggatcttggagtttgctcctc 34722217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 43352520 - 43352453
Alignment:
Q  166 ttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||||| ||||||||||| |||| | |||||||||||||| |||  |||| |||||||||    
T  43352520 ttggggttggtctaatggttggcttgagatcatggagtttgctcctctcaagaactcaggttcgattc 43352453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 55961939 - 55961892
Alignment:
Q  165 tttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    |||||| |||| |||||||||||||||||||||| |||||||||||||    
T  55961939 tttgggattggcctagtggttggcttgggatcttggagtttgctcctc 55961892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 13584454 - 13584380
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||| |||||| |||||||||||| || ||| || |||||||||||||  || |||||| ||||||||||||    
T  13584454 ccatttgaggttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccct 13584380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 31334545 - 31334615
Alignment:
Q  166 ttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||| | ||||||||||  ||||||| || |||| |||| |||||||||||||| ||||||||||||    
T  31334545 ttggggttcgcctagtggttgatttgggatattggagtgtgcttctcttaaggtctcaagttcgattccct 31334615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 41085024 - 41085094
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||| ||||||||||| |||| |||||| |||| | ||||| | ||||||| |||||||||||    
T  41085024 catttggggttgatctagtggttgacttgagatcttggagtgtcctcctttcaaggtctaatgttcgattc 41085094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 45787902 - 45787830
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||| |||||||||||||||| ||||| || ||||||||||   || ||||| ||||||||||||    
T  45787902 catttggggttggcctagtggttggcttggaatcttgga-tttgctcctccagagatctcaggttcgattccct 45787830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 2351020 - 2351084
Alignment:
Q  172 ttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||| |||||||||||||||| |||||  ||||||||||||   |||||||| ||||||||||||    
T  2351020 ttggcctagtggttggcttggaatcttgaagtttgctcctccagaggtctcaggttcgattccct 2351084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 33992622 - 33992694
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||| ||||||  ||||||||||| |||||||||| |||||||||||||   |||||| | |||||||||    
T  33992622 cccatttagggttgacctagtggttggtttgggatcttggagtttgctcctccagaggtcttaggttcgattc 33992694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 21344842 - 21344892
Alignment:
Q  183 gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||| ||| |||| ||||||||| |||||||||||||| ||||    
T  21344842 gttggcttgggaccttggagtgtgctcctctcaaggtctcatgttcaattc 21344892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 36131711 - 36131633
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctatg 239  Q
    |||||||||||||||  |||||||| ||||||||| || ||||| | |||||   | |||||| |||||||||||||||    
T  36131711 cccatttggggttggcatagtggtttgcttgggattttggagttcgttcctccagatgtctcaggttcgattccctatg 36131633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 37980198 - 37980148
Alignment:
Q  183 gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||| ||| |||| ||||||||| ||||||||| |||||||||    
T  37980198 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattc 37980148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 49287872 - 49287926
Alignment:
Q  179 agtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||| |||||||||| |||||||||||||   |||||||| |||||||||    
T  49287872 agtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattc 49287926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 56409976 - 56410026
Alignment:
Q  183 gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||| ||| |||| ||||||||| ||||||||| |||||||||    
T  56409976 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattc 56410026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 13550205 - 13550266
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctca 223  Q
    ||||||| |||||| |||||||||| |||| |||||  ||||||||||||||  ||||||||    
T  13550205 ccatttgcggttggcctagtggttgacttgagatctgggagtttgctcctctagaggtctca 13550266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 46932928 - 46932993
Alignment:
Q  169 gggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    |||| |||||||||||||||||| ||| ||  ||||| ||| ||| ||||| ||||||||||||||    
T  46932928 gggtaggtctagtggttggcttgagatgttgaagtttactcatctcaaggtttcatgttcgattcc 46932993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 20078163 - 20078111
Alignment:
Q  183 gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    |||||||||||||||| |||||||||||||   |||||||| ||| |||||||    
T  20078163 gttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccc 20078111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 28964010 - 28964106
Alignment:
Q  138 gacatcatttagaatgatgagaccccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||    
T  28964010 gacatcatttagaatgatgagaccccatttggggttggtctagtggttggtttgagatcttagagtttgctcctcttaaggtttcatgttcgattcc 28964106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 3734824 - 3734749
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||    
T  3734824 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 3734749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 20305908 - 20305981
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||  |||||||||    
T  20305908 cccatttggggttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattcc 20305981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 21092541 - 21092614
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||  |||||||||    
T  21092541 cccatttggggttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattcc 21092614  T

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Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 18532107 - 18532182
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  18532107 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 18532182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 34237856 - 34237781
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  34237856 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 34237781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 27746535 - 27746461
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||||||  ||||||||| ||||||||||||    
T  27746535 ccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 27746461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 28193477 - 28193549
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  28193477 atttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 28193549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 34694776 - 34694704
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||| | ||||||||||    
T  34694776 ccatttggggttggtctagtggttgacttgtgatcttggagtttgctcctctcaaggtcttaggttcgattcc 34694704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 4718645 - 4718720
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||    |||||||| ||||||||||||    
T  4718645 cccatttggggttggcctagtggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccct 4718720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 19471609 - 19471684
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||| ||||||||    
T  19471609 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccct 19471684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 19542533 - 19542608
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||| ||||||||    
T  19542533 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccct 19542608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 19590163 - 19590088
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||| ||||||||    
T  19590163 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccct 19590088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 21603241 - 21603308
Alignment:
Q  172 ttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctatg 239  Q
    |||| ||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||    
T  21603241 ttggcctagtggttggcttgggatcttagagtttgctcctccagaggtctcaggttcgattccctatg 21603308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 32879279 - 32879354
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||| |||||   |||||||| ||||||||||||    
T  32879279 cccatttggggttggtctagtggttgacttgggatcttcgagtttggtcctccagaggtctcaggttcgattccct 32879354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 39349256 - 39349331
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| | |||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  39349256 cccatttggggttggcccagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 39349331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 15259606 - 15259532
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||||||||||||| |||||||||| || ||||||||||   |||||||| ||||||||||||    
T  15259606 ccatttggggttggtctagtggttggtttgggatcttggattttgctcctccagaggtctcaggttcgattccct 15259532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 26169049 - 26168976
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    ||||||| ||||||| ||||||||| |||||||||||| |||||||||||||| ||||||||| ||| ||||||    
T  26169049 cccatttagggttggcctagtggtttgcttgggatcttggagtttgctcctctcaaggtctcaggtttgattcc 26168976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 34639406 - 34639345
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctca 223  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||||||| |||||||||    
T  34639406 ccatttggggttagtctagtggttggcttgggatcttggagtgtgctcctctcaaggtctca 34639345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 2618186 - 2618237
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  2618186 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctc 2618237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 42643319 - 42643244
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||| ||||||||||| |||||||||||||   ||||||||  |||||||||||    
T  42643319 cccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcagattcgattccct 42643244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 8387644 - 8387574
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||| |||| | ||||||| ||||||||    
T  8387644 ccatttggggttggcctagtggttgtcttgagatcttagagtttgcttctctcagggtctcaagttcgatt 8387574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28963863 - 28963905
Alignment:
Q  1 aacaatacatctagaaatcggaggaccaaaccttacctatagg 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  28963863 aacaatacatctagaaatcggaggaccaaaccttacctatagg 28963905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 41070767 - 41070836
Alignment:
Q  167 tggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||| |||||||||| ||||||||||| |||| |||| |||| ||||||||| ||||||||||||    
T  41070767 tggggttggcctagtggttgacttgggatcttggagtgtgctactctcaaggtctcaagttcgattccct 41070836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 264597 - 264525
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||| ||||| |||||||||||||||||||||| |||||||||||||   || ||||| ||||||||||||    
T  264597 atttggcgttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccct 264525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 651324 - 651396
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||| ||||| |||||||||||||||||||||| |||||||||||||   || ||||| ||||||||||||    
T  651324 atttggcgttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccct 651396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 837059 - 837131
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||| ||||| |||||||||||||||||||||| |||||||||||||   || ||||| ||||||||||||    
T  837059 atttggcgttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccct 837131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 24018385 - 24018453
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||  ||||||| | ||||||||    
T  24018385 atttggggttgatctagtggttgacttgggatcttggagtttgctcctccaaaggtctgaggttcgatt 24018453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 3794792 - 3794866
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||| |||||  ||| |||||||||| |||||||  ||||||||||||| ||||||||||||||| ||||||    
T  3794792 ccatttgtggttgacctaatggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccct 3794866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 8042655 - 8042724
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgat 231  Q
    |||||||||||||  |||||| ||||||||||||||| |||||||||||||  || |||||| |||||||    
T  8042655 ccatttggggttgacctagtgcttggcttgggatcttggagtttgctcctccaaaagtctcaggttcgat 8042724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 42328005 - 42328049
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagttt 205  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||    
T  42328005 cccatttggggttggcctagtggttggcttgggatcttggagttt 42328049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 7373527 - 7373472
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaa 216  Q
    ||||||||||||||||| | ||||||| |||||||||||||||||| |||| ||||    
T  7373527 cccatttggggttggtcgaatggttggtttgggatcttagagtttgttccttttaa 7373472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 7558144 - 7558093
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    ||||||||||||||| ||||| ||| |||||||||||| |||||||||||||    
T  7558144 cccatttggggttggcctagtagttagcttgggatcttggagtttgctcctc 7558093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 2166697 - 2166774
Alignment:
Q  161 cccatttggggttggtctagtg--gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| | ||||  ||||| |||||||||| ||||||||| |||  ||||||||| ||||||||||||    
T  2166697 cccatttggggttggcccagtgcagttggtttgggatcttggagtttgcttctccaaaggtctcaggttcgattccct 2166774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 14632975 - 14633029
Alignment:
Q  182 ggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  14632975 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 14633029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 15974906 - 15974979
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    |||||||  |||||| |||||||||  ||||||||||| |||| ||||||||| ||||||||| |||||||||||    
T  15974906 cccatttaaggttggcctagtggtta-cttgggatcttggagtatgctcctctcaaggtctcaagttcgattccc 15974979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 21667551 - 21667601
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    ||||||| ||||||||||||||||||||||| ||||| ||| |||||||||    
T  21667551 ccatttgaggttggtctagtggttggcttggaatcttggaggttgctcctc 21667601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 3403703 - 3403630
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    |||||||| |||||| || | ||||||| || |||||| |||||||||| ||| ||||||| ||||||||||||    
T  3403703 cccatttgaggttggccttggggttggcctgagatcttggagtttgctcatctcaaggtcttatgttcgattcc 3403630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 20469940 - 20469992
Alignment:
Q  184 ttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  20469940 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 20469992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 28474270 - 28474322
Alignment:
Q  183 gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    ||||| ||||||||||| ||||||||||||| ||||||||  |||||||||||    
T  28474270 gttggattgggatcttaaagtttgctcctctcaaggtctcgagttcgattccc 28474322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 28908823 - 28908879
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggt 219  Q
    ||||||| ||||||||||||||||| |||| || || |||||||||||||| |||||    
T  28908823 catttggagttggtctagtggttggtttggaattttggagtttgctcctctcaaggt 28908879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 16317636 - 16317686
Alignment:
Q  183 gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||| |||||||| ||||||||| |  ||||||||||||||||    
T  16317636 gttggcttgggaccttagagtgtgctcctctcagcgtctcatgttcgattc 16317686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 33585819 - 33585757
Alignment:
Q  170 ggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    |||||| ||||||||||| ||| ||||||||||| ||||||||| || || ||| ||||||||    
T  33585819 ggttggcctagtggttggtttgagatcttagagtgtgctcctctcaaagtttcaggttcgatt 33585757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 775979 - 775938
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagttt 205  Q
    |||||||||||||| | |||||||||||||||||| ||||||    
T  775979 atttggggttggtccaatggttggcttgggatcttggagttt 775938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 781633 - 781592
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagttt 205  Q
    |||||||||||||| | |||||||||||||||||| ||||||    
T  781633 atttggggttggtccaatggttggcttgggatcttggagttt 781592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 13525554 - 13525627
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    |||||||||| |||| ||||| ||||| ||| ||| ||||| | | || |||| ||||||||||||||||||||    
T  13525554 cccatttgggattggcctagtagttggtttgagattttagaatgtacttctctcaaggtctcatgttcgattcc 13525627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 13615089 - 13615162
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    |||||||||| |||| ||||| ||||| ||| ||| ||||| | | || |||| ||||||||||||||||||||    
T  13615089 cccatttgggattggcctagtagttggtttgagattttagaatgtacttctctcaaggtctcatgttcgattcc 13615162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 22200758 - 22200686
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||| |||||| || |||||||| |||||||||| |||||| || |||| || |||||| ||||||||||||    
T  22200758 catttgaggttggcct-gtggttggtttgggatcttggagtttacttctctcaaagtctcaggttcgattccct 22200686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 35653530 - 35653477
Alignment:
Q  169 gggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctc 222  Q
    ||||||| ||| ||||||||||| ||| ||||||| ||||| ||||||||||||    
T  35653530 gggttgggctaatggttggcttgagattttagagtgtgctcatcttaaggtctc 35653477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 36848949 - 36848892
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggt 219  Q
    ||||||||||||||  ||||||||| |||||| | || |||||||||||||| |||||    
T  36848949 ccatttggggttggcatagtggttgacttgggtttttggagtttgctcctctcaaggt 36848892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 1372563 - 1372527
Alignment:
Q  200 gagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  1372563 gagtgtgctcctcttaaggtctcaggttcgattccct 1372527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 11715010 - 11714946
Alignment:
Q  171 gttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    ||||| ||||||||||| ||| |||||| ||||||||| |||| ||| | ||| |||||||||||    
T  11715010 gttggcctagtggttggtttgagatcttggagtttgcttctctcaagatttcaggttcgattccc 11714946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 18897175 - 18897242
Alignment:
Q  169 gggttggtctagtggt--tggcttgggatcttagagtttgctcctctt-aaggtctcatgttcgattc 233  Q
    ||||||| ||||||||  ||| |||||| |||||||| |||||||| | |||||||||||||||||||    
T  18897175 gggttggcctagtggtgttggtttgggaccttagagtgtgctcctcctcaaggtctcatgttcgattc 18897242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 30911455 - 30911387
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    |||||||||||| ||| || |||  ||| |||||| |||||||||||||| ||||| ||||||| ||||    
T  30911455 atttggggttggcctaatgattgatttgagatcttggagtttgctcctctcaaggtttcatgtttgatt 30911387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 39683530 - 39683558
Alignment:
Q  208 tcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||||||||||||||||    
T  39683530 tcctcttaaggtctcatgttcgattccct 39683558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 32729541 - 32729619
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctatg 239  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||| || |||||| |||||||||||||||    
T  32729541 cccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccctatg 32729619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 27455067 - 27454995
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||   |||||||| |||||||||    
T  27455067 cccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 27454995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 4621438 - 4621363
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  4621438 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 4621363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 7197447 - 7197372
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  7197447 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 7197372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 24674389 - 24674464
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  24674389 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 24674464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 46607806 - 46607881
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||| ||||||||||| |||||||||||||  ||||||||| ||||||||||||    
T  46607806 cccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 46607881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 8077643 - 8077715
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| |||||||||    
T  8077643 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 8077715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 25496686 - 25496614
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||| ||||| |||||| ||||||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  25496686 atttggcgttggcctagtgattggcttgggatcttggagattgctcctcttaaggtctcaagttcgattccct 25496614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 168197 - 168272
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||| |   ||||||||| ||||||||||||    
T  168197 cccatttggagttggcctagtggttggcttgggatcttagagtttgctctttcaaaggtctcaggttcgattccct 168272  T

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Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 20487391 - 20487316
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||| |||||||||||| |||||||| |||||||||||||   |||||||| ||||||||||||    
T  20487391 cccatttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccct 20487316  T

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Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 23734112 - 23734187
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||||||||||   |||||||| ||||||||||||    
T  23734112 cccatttggggttggtttagtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccct 23734187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 23741304 - 23741379
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||||||||||   |||||||| ||||||||||||    
T  23741304 cccatttggggttggtttagtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccct 23741379  T

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Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 29057538 - 29057463
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||||| |||  ||||||||| ||||||||||||    
T  29057538 cccatttggggttggcctagtggttggtttgggatcttggagtttgctgctccaaaggtctcaggttcgattccct 29057463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 34778338 - 34778413
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||| ||||||||    
T  34778338 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccct 34778413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 52135127 - 52135197
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| ||| || |||||| ||||||||    
T  52135127 ccatttggggttggtctagtggttgacttgggatcttggagtttgctcatctcaatgtctcaggttcgatt 52135197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 1378743 - 1378812
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    |||||||||||||||||||||||| ||||| ||||| |||||| ||||||  ||||||||||||||||||    
T  1378743 catttggggttggtctagtggttgacttggaatcttggagtttactcctccaaaggtctcatgttcgatt 1378812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 15059603 - 15059531
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||||||||||   |||||||| |||||||||    
T  15059603 cccatttggggttggcctagtggttggcttggaatcttggagtttgctcctccagaggtctcaggttcgattc 15059531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 46113600 - 46113528
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||||   |||||||| ||||||||||||    
T  46113600 atttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 46113528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 7766928 - 7766853
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||| |||||||| ||||||||| |||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  7766928 cccattcggggttggcctagtggttagcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 7766853  T

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Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 24216974 - 24217045
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||||  |||||||||| ||||||||||| |||| ||||||||| ||||||||| ||||||||    
T  24216974 cccatttggggttgacctagtggttgacttgggatcttggagtgtgctcctctcaaggtctcaggttcgatt 24217045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 37349521 - 37349596
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctat 238  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||||| | | ||||| |||||||| |||||    
T  37349521 catttggggttggtttagtggttgacttgagatcttagagtttgctcctctcatgatctcaggttcgatttcctat 37349596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 2272342 - 2272415
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||    |||||||| ||| ||||||||    
T  2272342 catttggggttggcctagtggttgacttgggatcttagagtttgctcctacagaggtctcaggtttgattccct 2272415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 24122021 - 24122094
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||  ||||||||||||||||||||| | |||||||||||   |||||||| ||||||||||||    
T  24122021 catttggggttggcttagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccct 24122094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 1486416 - 1486489
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||  |||||||||||||||||||||| |||  |||| |||| ||||||||| ||||||||||||    
T  1486416 cccatttggggttgacctagtggttggcttgggatcttggag--tgctactctcaaggtctcaggttcgattccct 1486489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 30677172 - 30677247
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||  ||||||||||| |||||||||  |||||||||||||  ||||||||| ||| ||||||||    
T  30677172 cccatttggggttgacctagtggttggtttgggatctaggagtttgctcctccaaaggtctcaggtttgattccct 30677247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 7578421 - 7578483
Alignment:
Q  177 ctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctatg 239  Q
    |||||||||||||||||||||| ||||||| |||||   |||||||| |||||||||||||||    
T  7578421 ctagtggttggcttgggatcttggagtttgttcctccagaggtctcaggttcgattccctatg 7578483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 1138575 - 1138644
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcga 230  Q
    ||||||||||||||  ||||||||||||||| |||||| |||| ||||||||| ||||||| | ||||||    
T  1138575 cccatttggggttgacctagtggttggcttgagatcttggagtgtgctcctctcaaggtcttaggttcga 1138644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 45859222 - 45859169
Alignment:
Q  183 gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||| ||||||||||||||  |||||||| ||||||||||||    
T  45859222 gttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccct 45859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 47091686 - 47091735
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcc 210  Q
    ||||||||||||||| ||||||||||||||| |||||| |||||||||||    
T  47091686 cccatttggggttggcctagtggttggcttgagatcttggagtttgctcc 47091735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 40802268 - 40802196
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||||||  | |||||||||||| ||| || |||||||||| ||| ||||||||||||| |||||    
T  40802268 cccatttggggttggctttgtggttggcttgagatattggagtttgctcatctcaaggtctcatgtttgattc 40802196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 52592557 - 52592605
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcc 210  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  52592557 ccatttagagttggtctagtggttggcttgagatcttagagtttgctcc 52592605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 809226 - 809289
Alignment:
Q  169 gggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||| || |||||||| |||||||||| |||||| ||||||||||||||||| ||| ||||    
T  809226 gggttggcctcgtggttggtttgggatcttggagtttactcctcttaaggtctcaggtttgatt 809289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 1095193 - 1095154
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagt 203  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  1095193 atttggggttggtctagtggttggcttgggatcttggagt 1095154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 1378894 - 1378965
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    |||||||  ||||||  ||||||||| ||||||||||| |||||||||||||  || |||||||||||||||    
T  1378894 cccatttaaggttggcttagtggttgacttgggatcttggagtttgctcctccaaaagtctcatgttcgatt 1378965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 7946840 - 7946915
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||| |  ||||||||||||||| ||||||  ||||||||||||   |||||||| ||||||||||||    
T  7946840 cccatttggggtcgacctagtggttggcttgagatcttgaagtttgctcctccagaggtctcaagttcgattccct 7946915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 14258628 - 14258577
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    |||||||||| |||| |||||||||||||||||||||| ||||||| |||||    
T  14258628 cccatttgggcttggcctagtggttggcttgggatcttggagtttgttcctc 14258577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 25237190 - 25237115
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||| | ||||| ||| ||||| | |||||||||| ||||||||| |||| ||||||||| ||||||||||||    
T  25237190 cccatttagagttggcctaatggttagtttgggatcttggagtttgcttctctcaaggtctcaggttcgattccct 25237115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 33905690 - 33905636
Alignment:
Q  182 ggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  33905690 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 33905636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 37351643 - 37351589
Alignment:
Q  180 gtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    ||||||||||||||||||| |||||||||||||  || |||||| ||||||||||    
T  37351643 gtggttggcttgggatcttggagtttgctcctccaaatgtctcaggttcgattcc 37351589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 1818728 - 1818805
Alignment:
Q  159 accccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||||| || || |||||||| ||||||| |||||||||| ||   |||| ||| ||||||||||||    
T  1818728 accccatttggggttggcctggtagttggcttaggatcttggagtttgctcttccagaggtttcaggttcgattccct 1818805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 9926349 - 9926288
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctc 222  Q
    ||||||||| | ||||||||| |||| ||||||||||| |||| ||||||||| ||||||||    
T  9926349 cccatttggagctggtctagtagttgacttgggatcttggagtgtgctcctctcaaggtctc 9926288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 18646852 - 18646921
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||  ||||||||||||||| |||||| ||||||||| |||   |||||||| |||||||||    
T  18646852 atttggggttgacctagtggttggcttgtgatctttgagtttgcttctccagaggtctcaggttcgattc 18646921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 17935782 - 17935838
Alignment:
Q  178 tagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    ||||||||| ||||||||||| |||||||||||||   |||||||| ||||||||||    
T  17935782 tagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 17935838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 3334778 - 3334844
Alignment:
Q  169 gggttggtctagtg--gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||| ||||  ||||||||| ||||||||||| ||||| ||| ||||||||| |||||||||    
T  3334778 gggttggtccagtgatgttggcttgagatcttagagtgtgctcttctcaaggtctcaagttcgattc 3334844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 18533925 - 18533874
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    ||||||||||||||   ||||||||| |||| ||||||||||||||||||||    
T  18533925 cccatttggggttgacatagtggttgacttgagatcttagagtttgctcctc 18533874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 23232466 - 23232391
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||| |||| |||||||||| |||||||||||  ||||||||| ||   |||| ||| ||||||||||||    
T  23232466 cccatttgggattggcctagtggttgacttgggatcttgaagtttgctcttccagaggtttcaggttcgattccct 23232391  T

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Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 2537700 - 2537767
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    ||||||||||||||| ||||||||||| ||||||||      ||||||||||| ||||||||| ||| ||||||    
T  2537700 cccatttggggttggcctagtggttggattgggatc------tttgctcctctcaaggtctcaggtttgattcc 2537767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 6776148 - 6776190
Alignment:
Q  169 gggttggtctagtggttggcttgggatcttagagtttgctcct 211  Q
    ||||||| ||||||||||| |||||||||| ||||||||||||    
T  6776148 gggttggcctagtggttggtttgggatcttggagtttgctcct 6776190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 39714829 - 39714779
Alignment:
Q  183 gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||||||| |||| ||||||||| ||||||||| ||| |||||    
T  39714829 gttggcttgggatcttggagtgtgctcctctcaaggtctcaagtttgattc 39714779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 37046994 - 37047062
Alignment:
Q  169 gggttggtctagtggt--tggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    |||||||||| |||||  |||||||||| ||| |||| ||||||||| ||||||||| ||| |||||||    
T  37046994 gggttggtctggtggtgttggcttgggaccttggagtgtgctcctctcaaggtctcaggtttgattccc 37047062  T

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Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 19480552 - 19480604
Alignment:
Q  183 gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    |||| ||||||||||| |||| ||||||||| |||||||||  ||||||||||    
T  19480552 gttgacttgggatcttggagtgtgctcctctcaaggtctcacattcgattccc 19480604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 41470661 - 41470609
Alignment:
Q  183 gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    ||||||||| || ||| |||| ||||||||| ||||||||| |||||||||||    
T  41470661 gttggcttgagaccttggagtatgctcctctcaaggtctcaagttcgattccc 41470609  T

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Target: chr3 (Bit Score: 57; Significance: 7e-24; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 34492776 - 34492696
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctatgct 241  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   ||||||||||||||||||||| ||||    
T  34492776 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgct 34492696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 25289915 - 25289840
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  25289915 cccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 25289840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 30257620 - 30257695
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||    
T  30257620 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 30257695  T

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Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 40940821 - 40940896
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  40940821 cccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 40940896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 8456351 - 8456276
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  8456351 cccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccct 8456276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 30807354 - 30807279
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  30807354 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 30807279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 35492907 - 35492982
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  35492907 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 35492982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 40133650 - 40133575
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| ||||||||||||||||||| || |||||||||||||  ||||||||| ||||||||||||    
T  40133650 cccatttggggttggcctagtggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccct 40133575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 45529955 - 45529880
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  45529955 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 45529880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 46576344 - 46576419
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  46576344 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 46576419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 50582988 - 50583059
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| ||| ||||||||    
T  50582988 cccatttggggttggcctagtggttggtttgggatcttggagtttgctcctcttaaggtttcaggttcgatt 50583059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 53424377 - 53424302
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  53424377 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 53424302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 48977384 - 48977457
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    ||||||||||||||| |||||||||| ||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  48977384 cccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattcc 48977457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 4252597 - 4252522
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| ||||||||||||||| |||||| |||| ||||||||| ||||||||| ||| ||||||||    
T  4252597 cccatttggggttggcctagtggttggcttgagatcttggagtgtgctcctctcaaggtctcaagtttgattccct 4252522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 7485726 - 7485651
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||  ||||||||| ||||||||||| |||||||||||||  ||||||||| ||||||||||||    
T  7485726 cccatttggggttggcatagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 7485651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 21362939 - 21363014
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||| ||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  21362939 cccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 21363014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 31538039 - 31537964
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||| ||||||| |||||||||||||   |||||||||||| ||||||||    
T  31538039 cccatttggggttggcctagtggttggcttaggatcttggagtttgctcctccagaggtctcatgtttgattccct 31537964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 52455850 - 52455775
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| ||||||||||||| |||||||| |||||||||||||   |||||||| ||||||||||||    
T  52455850 cccatttggggttggcctagtggttggctagggatcttggagtttgctcctccagaggtctcaggttcgattccct 52455775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 25379760 - 25379830
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||    
T  25379760 atttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 25379830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 7470416 - 7470341
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||| | |||||||||| |||| |||||| |||||||||||||  ||||||||| ||||||||||||    
T  7470416 cccatttggggtttgcctagtggttgacttgagatcttggagtttgctcctccaaaggtctcaggttcgattccct 7470341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 49258463 - 49258388
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||| | ||||||||||||||||||||||  ||||||||||||   |||||||| ||||||||||||    
T  49258463 cccatttggggtttgcctagtggttggcttgggatcttgcagtttgctcctccagaggtctcaggttcgattccct 49258388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 4462631 - 4462704
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||||| ||   || |||||||||||||||||||    
T  4462631 catttggggttggcctagtggttggcttgagatcttggagtttgctacttcaaaagtctcatgttcgattccct 4462704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 26108299 - 26108363
Alignment:
Q  172 ttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  26108299 ttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 26108363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 52821833 - 52821761
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||| ||||| |||||||||| ||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  52821833 atttggtgttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 52821761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 55371483 - 55371411
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||| |||||| ||||||||||||||| ||| || |||| |||| |||| ||||||||||||||||||||||    
T  55371483 atttgaggttggcctagtggttggcttgcgattttggagtatgcttctctcaaggtctcatgttcgattccct 55371411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 9842917 - 9842968
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    ||||||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  9842917 cccatttggggttggtctagtggttggtttgggatcttggagttttctcctc 9842968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 9853623 - 9853686
Alignment:
Q  172 ttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    |||||||||||||| | |||||||||| |||||||||||||  ||||||||| |||||||||||    
T  9853623 ttggtctagtggttagtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 9853686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 15566692 - 15566625
Alignment:
Q  169 gggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||| ||||||||||||||| |||||| |||||||||||||   |||||||| ||||||||||||    
T  15566692 gggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccct 15566625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 16140293 - 16140364
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||||| |||||| || | |||||||||| ||| |||||||||| || |||||||||||||||    
T  16140293 cccatttggggttggcctagtgattagtttgggatcttggagcttgctcctctcaaagtctcatgttcgatt 16140364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 45272617 - 45272542
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||||||||   | ||||||  |||||||||||    
T  45272617 cccatttggggttggcctagtcgttggcttgggatcttggagtttgctcctccagatgtctcagtttcgattccct 45272542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 55287799 - 55287874
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||||||    |||| ||| ||||||||||||    
T  55287799 cccatttggggttggcatagtggttggcttggaatcttagagtttgctccttcagaggtttcaggttcgattccct 55287874  T

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Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 25344257 - 25344207
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    |||||||||||||| |||||||||| ||||||||||| |||||||||||||    
T  25344257 ccatttggggttggcctagtggttgacttgggatcttcgagtttgctcctc 25344207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 26174114 - 26174180
Alignment:
Q  166 ttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    |||| ||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||    
T  26174114 ttggagttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 26174180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 36660768 - 36660838
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||||||  ||||||||||| || ||||||| |||||||||||||| ||||||||| |||| ||||    
T  36660768 catttggggttgacctagtggttggtttaggatcttggagtttgctcctctcaaggtctcaggttcaattc 36660838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 18177088 - 18177013
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||| |||| |||||| |||||||||| ||   |||| ||| ||||||||||||    
T  18177088 cccatttggggttggcctagtggttgacttgagatcttggagtttgctcttccagaggtatcaggttcgattccct 18177013  T

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Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 51391024 - 51390965
Alignment:
Q  177 ctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |||||  ||| |||||||    
T  51391024 ctagtggttggcttgagatcttagagtttgctcctctcaagatctcaatttcaattccct 51390965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 24703702 - 24703748
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctc 209  Q
    |||||| ||||||||||||||||| |||||||||||||| |||||||    
T  24703702 catttgaggttggtctagtggttgacttgggatcttagaatttgctc 24703748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 35623317 - 35623267
Alignment:
Q  183 gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||| ||| |||| ||||||||| |||||||||||||||||||    
T  35623317 gttggcttgggaccttggagtgtgctcctctcaaggtctcatgttcgattc 35623267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 53288912 - 53288838
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||| | ||||| | ||||||||| ||||||| ||||||||||||||||  ||||||||| | ||||||||||    
T  53288912 ccattttgcgttggccaagtggttggtttgggatattagagtttgctcctccaaaggtctcaggctcgattccct 53288838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 32151428 - 32151492
Alignment:
Q  169 gggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||  ||||| |||  ||||||||    
T  32151428 gggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtttcaaattcgattc 32151492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 53234095 - 53234039
Alignment:
Q  177 ctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||||||||||||| |||||||||||||   | |||||| |||||||||    
T  53234095 ctagtggttggcttgggatcttggagtttgctcctccagaagtctcaggttcgattc 53234039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 27887426 - 27887497
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    |||||||||||| |||||||||||||||| ||| || |||| |||| |||| || |||| | ||||||||||    
T  27887426 catttggggttgatctagtggttggcttgagatattggagtgtgcttctctcaatgtcttaggttcgattcc 27887497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 29915470 - 29915399
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||| ||||||  ||| |||||| ||||||||||| |||||||||||||   |||||||| ||||||||    
T  29915470 cccatttagggttgacctaatggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatt 29915399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 29964623 - 29964552
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||| ||||||  ||| |||||| ||||||||||| |||||||||||||   |||||||| ||||||||    
T  29964623 cccatttagggttgacctaatggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatt 29964552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 40063645 - 40063695
Alignment:
Q  184 ttggcttgggatcttagagtttgctcct-cttaaggtctcatgttcgattc 233  Q
    |||||||||||||| ||||| ||||||| |||||||||||| |||||||||    
T  40063645 ttggcttgggatctgagagtatgctcctccttaaggtctcaagttcgattc 40063695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 40268514 - 40268564
Alignment:
Q  183 gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||| ||| ||||  |||||||||||||||||| |||||||||    
T  40268514 gttggcttgggaccttggagtgggctcctcttaaggtctcaggttcgattc 40268564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 50195476 - 50195410
Alignment:
Q  165 tttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgat 231  Q
    ||||||||| |  ||||||||| ||||||||||| ||||||||| |||| ||| ||||| |||||||    
T  50195476 tttggggttagcatagtggttgtcttgggatcttggagtttgcttctctcaagatctcaagttcgat 50195410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 6041871 - 6041802
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||  ||| |||||| ||||  ||||| |||||||||||||| ||||  ||||||||||||    
T  6041871 catttggggttgccctaatggttgacttgaaatcttggagtttgctcctctcaaggagtcatgttcgatt 6041802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 26158816 - 26158889
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||| |||   ||||||||| |||||| |||| ||||||||| ||||||||| |||  |||||||    
T  26158816 catttggggttggcctatgtgttggcttgagatcttggagtgtgctcctctcaaggtctcaggtttcattccct 26158889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 34844396 - 34844449
Alignment:
Q  183 gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||| || ||| |||| ||||||||| ||||||||| ||||||||||||    
T  34844396 gttggcttgagaccttggagtgtgctcctctcaaggtctcaggttcgattccct 34844449  T

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Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 11390601 - 11390649
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    |||||||||||| ||||||||||| ||| |||||| |||||| ||||||    
T  11390601 atttggggttggcctagtggttggtttgagatcttggagttttctcctc 11390649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 16900733 - 16900681
Alignment:
Q  182 ggttggcttgggatcttagagtttgctcctctt-aaggtctcatgttcgattc 233  Q
    ||||||||||||| ||| |||| |||||||| | |||||||||||||||||||    
T  16900733 ggttggcttgggaccttggagtgtgctcctcgtcaaggtctcatgttcgattc 16900681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 51532785 - 51532857
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||||||||  ||| | ||||| ||| ||| || ||||||||| |||  |||||||||||||||||||    
T  51532785 cccatttggggttgacctattagttggtttgagattttggagtttgcttctccaaaggtctcatgttcgattc 51532857  T

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Target: scaffold0576 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 5283 - 5208
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||    
T  5283 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 5208  T

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Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 2751271 - 2751346
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||    
T  2751271 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 2751346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 10091188 - 10091263
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  10091188 cccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 10091263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 2103055 - 2103130
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  2103055 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 2103130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 7176063 - 7175988
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  7176063 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 7175988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 7275277 - 7275352
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  7275277 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 7275352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 11997849 - 11997924
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||| |||||| |||||||||||||||||||||| ||||||||||||||  |||||||| ||||||||||||    
T  11997849 cccatttgtggttgggctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccct 11997924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 21218034 - 21217959
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  21218034 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 21217959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 40543111 - 40543036
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  40543111 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 40543036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 13332622 - 13332549
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| | |||||||| || |||||||||    
T  13332622 catttggggttggcctagtggttggcttgggatcttggagtttgctcctcctgaggtctcaggtacgattccct 13332549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 22119890 - 22119963
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  22119890 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 22119963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 23854396 - 23854468
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| |||||||||    
T  23854396 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 23854468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 27312155 - 27312227
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||  |||| ||| ||||||||||||    
T  27312155 atttggggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtttcaggttcgattccct 27312227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 42031920 - 42031988
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcga 230  Q
    |||||||| ||||||||||||||||| |||||| ||||||||||| |||||||||||||||| ||||||    
T  42031920 ccatttggagttggtctagtggttggtttgggaccttagagtttgttcctcttaaggtctcacgttcga 42031988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 7800033 - 7799958
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  7800033 cccatttggggttgacctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 7799958  T

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Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 18044107 - 18044182
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   ||||| || ||||||||||||    
T  18044107 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcccaggttcgattccct 18044182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 22638292 - 22638367
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||| |   ||||||||| ||||||||||||    
T  22638292 cccatttggggttggtctagtggttgacttgagatcttagagtttgctctttcaaaggtctcaggttcgattccct 22638367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 23330940 - 23330865
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||| | ||||||||||||||||||| ||||||| ||||||||| ||||||||| |||||| |||||    
T  23330940 cccatttggggttagcctagtggttggcttgggattttagagtgtgctcctctcaaggtctcaggttcgactccct 23330865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 40332099 - 40332170
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||| |||||||||||||||||||||  ||||| |||||||||||||| ||||||||| ||||||||    
T  40332099 cccatttggagttggtctagtggttggcttgaaatcttggagtttgctcctctaaaggtctcaggttcgatt 40332170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 2344299 - 2344372
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||| |||||  |||||||||    
T  2344299 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaagctctcagattcgattcc 2344372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 31197591 - 31197639
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctc 209  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31197591 cccatttggggttggtctagtggttggcttgggatcttggagtttgctc 31197639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 19421231 - 19421302
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||||   ||||||||||||||||||||| ||||||||||||||  |||||||| ||||||||    
T  19421231 cccatttggggttgacttagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatt 19421302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 42913714 - 42913643
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    |||||||  |||||| |||||||||||||||||||||| ||||||||||||||  |||||||| ||||||||    
T  42913714 cccattttcggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatt 42913643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 3950988 - 3950914
Alignment:
Q  163 catttggggttggtctagtggttggcttg-ggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||||||||||||||||| | ||||| |||  ||||||||| || |||||||||||||||||||    
T  3950988 catttggggttggtctagtggttggcttgagaatcttggagcgtgctcctctcaatgtctcatgttcgattccct 3950914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 8435895 - 8435825
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||| ||| | ||||||||    
T  8435895 ccatttggggttggtctagtggttgacttgggatcttggagtttgctcctttgaagatcttaggttcgatt 8435825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 21574304 - 21574230
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    ||||||||||||||| ||||||||||| ||||||| || |||| ||||||||| |||||| || |||||||||||    
T  21574304 cccatttggggttggcctagtggttggtttgggattttggagtgtgctcctctcaaggtcacaggttcgattccc 21574230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 43785500 - 43785426
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    ||||||||||||||  ||| |||||||||||||||||| ||| |||||||||  ||||||||| |||||||||||    
T  43785500 cccatttggggttgacctaatggttggcttgggatctttgagattgctcctccaaaggtctcaagttcgattccc 43785426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 577681 - 577750
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| | | ||||||| | ||||||||    
T  577681 catttggggttggcctagtggtttgcttgggatcttagagtttgctcatttcaaggtcttaggttcgatt 577750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 28003838 - 28003887
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  28003838 catttggggttgatctagtggttggcttgggatcttggagtttgctcctc 28003887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 17212053 - 17212125
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||||||||   |||||||| |||| ||||    
T  17212053 cccatttggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattc 17212125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 28646972 - 28647044
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||| |||||| ||| ||||||||||| |||| |||| |||| ||||||||| ||||||||||||    
T  28646972 atttggggttggcctagtgattgacttgggatcttggagtgtgcttctctcaaggtctcaggttcgattccct 28647044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 42814867 - 42814939
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||| |||||  ||||||||| ||||||||||| ||||||||||||||| | |||||| ||||||||||||    
T  42814867 atttggagttggcttagtggttgacttgggatcttggagtttgctcctcttgaagtctcaggttcgattccct 42814939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 17197151 - 17197076
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||| || ||||||||||| ||| |||||| |||||||||||||   |||||||| ||||||||||||    
T  17197151 cccatttggggtcggcctagtggttggtttgcgatcttggagtttgctcctccataggtctcaagttcgattccct 17197076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 22299865 - 22299924
Alignment:
Q  177 ctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  22299865 ctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccct 22299924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 25333419 - 25333494
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||| |||   |||||||| ||||||| ||||    
T  25333419 cccatttggggttggcttagtggttggcttgggatcttggagtttgcttctccagaggtctcaggttcgataccct 25333494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 27009359 - 27009434
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||| ||||||| |||||||||| ||   |||||||| ||||||| ||||    
T  27009359 cccatttggggttggcctagtggttggcttcggatcttggagtttgctcatccagaggtctcaggttcgatcccct 27009434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 31713096 - 31713045
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  31713096 cccatttggggttggcctagtggttggtttgggatcttggagtttgctcctc 31713045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 37693763 - 37693692
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    |||||||||| || ||||||| ||||| |||||||||| |||| |||||||||||| |||||| ||||||||    
T  37693763 cccatttgggtttagtctagttgttggtttgggatcttggagtgtgctcctcttaatgtctcaggttcgatt 37693692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 12211735 - 12211665
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    |||||||||||||| |||||||||||||| ||||||| |||| ||||||||| ||| ||||| ||| ||||    
T  12211735 ccatttggggttggcctagtggttggcttaggatcttggagtgtgctcctctcaagatctcaggtttgatt 12211665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 21835152 - 21835226
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||| ||||||  |||||||||||||||||||||| |||||||||||||   || ||||| ||||||||||||    
T  21835152 ccatttagggttgacctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccct 21835226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 22703503 - 22703561
Alignment:
Q  178 tagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  22703503 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 22703561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 28089817 - 28089867
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    |||||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  28089817 ccatttggggttggcctagtggttggcttgagatcttggagtttgctcctc 28089867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 3951190 - 3951130
Alignment:
Q  163 catttggggttggtctagtggttggctt-gggatcttagagtttgctcctcttaaggtctc 222  Q
    |||||||||||||||||||||||||||| |||||||| |||| ||||||||| || |||||    
T  3951190 catttggggttggtctagtggttggcttggggatcttggagtgtgctcctctcaaagtctc 3951130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 21370597 - 21370672
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||| |||||    | |||||| ||||||||||||    
T  21370597 cccatttggggttggcctagtggttggtttgggatcttggagtttactccttcagatgtctcaggttcgattccct 21370672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 22264703 - 22264628
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| | |  |||||| |||| ||||| |||||||||||||| |||||||||  |||||||||||    
T  22264703 cccatttggggttggccgaagggttggtttggaatcttggagtttgctcctctcaaggtctcagattcgattccct 22264628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 32849591 - 32849642
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    ||||||||||||| | |||||||||| ||||||||||| |||||||||||||    
T  32849591 cccatttggggttagcctagtggttgacttgggatcttggagtttgctcctc 32849642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 9718187 - 9718113
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||| |||||| |||||||||||| || ||| || |||||||||||||  || |||||| ||||||||||||    
T  9718187 ccatttgaggttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccct 9718113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 1469114 - 1469183
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||| |||||||||| ||||  ||||| ||||||| || ||| ||||||||| ||||||||    
T  1469114 catttggggttggcctagtggttgacttgaaatcttggagtttgttcatctcaaggtctcaggttcgatt 1469183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 39145853 - 39145802
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    |||||||| |||||  |||||||||| ||||||||||| |||||||||||||    
T  39145853 cccatttgaggttgacctagtggttgacttgggatcttggagtttgctcctc 39145802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 9683827 - 9683888
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctca 223  Q
    ||||||| |||||| |||||||||| |||| |||||  ||||||||||||||  ||||||||    
T  9683827 ccatttgcggttggcctagtggttgacttgagatctgggagtttgctcctctagaggtctca 9683888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 19612690 - 19612645
Alignment:
Q  183 gttggcttgggatcttagagtttgctcctcttaaggtctcatgttc 228  Q
    ||||||||||||||||  ||| ||||||||| ||||||||||||||    
T  19612690 gttggcttgggatcttgaagtgtgctcctctcaaggtctcatgttc 19612645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 23012707 - 23012662
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgct 208  Q
    ||||| ||||||| | |||||||||||||||||||| |||||||||    
T  23012707 catttagggttggcccagtggttggcttgggatcttggagtttgct 23012662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 27704004 - 27704073
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||| ||||||| ||||||||||||| ||||||  |||||||||||    |||||||| ||||||||    
T  27704004 catttggagttggtccagtggttggcttgagatcttgaagtttgctcctacagaggtctcaggttcgatt 27704073  T

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Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 12591633 - 12591708
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||    
T  12591633 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 12591708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 15360299 - 15360224
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||    
T  15360299 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 15360224  T

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Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 9208248 - 9208322
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    |||||||||||||| |||||||||||| |||||||||| |||||||||||||| ||||||||| |||||||||||    
T  9208248 cccatttggggttgttctagtggttggattgggatcttggagtttgctcctctcaaggtctcaggttcgattccc 9208322  T

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Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 9843935 - 9844003
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcga 230  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||| ||||||    
T  9843935 ccatttggggttggtctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcga 9844003  T

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Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 11007161 - 11007233
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||  ||||||||| |||||||||    
T  11007161 cccatttggggttgatctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 11007233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 9238971 - 9239046
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  9238971 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 9239046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 33499470 - 33499546
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttc-gattccct 236  Q
    ||||||||||||||| || ||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||||||    
T  33499470 cccatttggggttggcctggtggttggcttgggatcttggagtttgctcctctcaaggtctcaggttcagattccct 33499546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 22576063 - 22576138
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   ||||||||  |||||||||||    
T  22576063 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccct 22576138  T

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Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 8479306 - 8479379
Alignment:
Q  159 accccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||||||| |||||||||| ||||||||||| |||| ||||||||||||| | ||| ||||||||    
T  8479306 accccatttggggttggcctagtggttgacttgggatcttggagtgtgctcctcttaagatttcaggttcgatt 8479379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 11448871 - 11448939
Alignment:
Q  165 tttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| |||||||||    
T  11448871 tttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 11448939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 3222835 - 3222761
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||||||   |||||||| ||||||||||||    
T  3222835 cccatttggggttggcctagtggttggcttgggatcttgcagtttgctcctc-agaggtctcaggttcgattccct 3222761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 28672063 - 28672138
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||| |||| |||||| ||||||||||||||  |||||| | ||||||||||||    
T  28672063 cccatttggggttggcctagtggttgacttgagatcttggagtttgctcctctagaggtcttaggttcgattccct 28672138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 34147342 - 34147417
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| ||   | |||||| ||||||||||||    
T  34147342 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccct 34147417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 34159958 - 34160033
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| ||   | |||||| ||||||||||||    
T  34159958 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccct 34160033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 5360279 - 5360197
Alignment:
Q  154 atgagaccccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||| ||||||||| ||||| || ||||||||||||||||||| ||||||||| |||   |||||||| ||||||||||||    
T  5360279 atgagaacccatttggagttggcctggtggttggcttgggatcttggagtttgcttctcaagaggtctcaggttcgattccct 5360197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 21982521 - 21982447
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||||||   |||||| | |||||||||||    
T  21982521 cccatttggggttggcctagtggttggcttgggatcttgaagtttgctcctccagaggtctgaggttcgattccc 21982447  T

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Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 13753236 - 13753308
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||||||||| |||||||||||||| ||||||| |||||||||||||   |||||||| |||| ||||    
T  13753236 cccatttggggttggcctagtggttggctttggatcttggagtttgctcctccagaggtctcaggttcaattc 13753308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 654347 - 654272
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||| |||| ||||||| || ||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  654347 cccatttgggtttggcctagtggctgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 654272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 17081255 - 17081204
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    |||||||| |||| |||||||||||||||| ||||||| |||||||||||||    
T  17081255 cccatttgaggttagtctagtggttggcttaggatcttggagtttgctcctc 17081204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 17149637 - 17149582
Alignment:
Q  181 tggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||| |||||||||| |||| ||||||||| ||||||||| ||||||||||||    
T  17149637 tggttggtttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccct 17149582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 21148711 - 21148664
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgct 208  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  21148711 cccatttggagttggcctagtggttggcttgggatcttggagtttgct 21148664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 14212890 - 14212963
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||| |||  ||| ||||||||| |||||||| |||||||||||||   |||||||| ||||||||||||    
T  14212890 catttgggattgacctaatggttggctcgggatcttggagtttgctcctccagaggtctcaggttcgattccct 14212963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 33718659 - 33718615
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagttt 205  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||    
T  33718659 cccatttagggttggtctagtggttggtttgggatcttggagttt 33718615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 1344934 - 1345006
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||  |||||||||||  ||||||||| ||||||| |||||   |||||||| ||||||||||||    
T  1344934 ccatttggggttgacctagtggttgg--tgggatcttggagtttgttcctccagaggtctcaggttcgattccct 1345006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 10377714 - 10377789
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctatg 239  Q
    |||||||||||| | ||| ||||||||| |||||| |||| ||||| | | ||||||||| |||| ||||||||||    
T  10377714 atttggggttggcccagttgttggcttgagatcttggagtgtgctcatgtcaaggtctcaggttcaattccctatg 10377789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 28667641 - 28667696
Alignment:
Q  178 tagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||||| ||| ||| ||| ||||| ||||||||||||||||| |||||    
T  28667641 tagtggttggcttgagattttaaagtgtgctcttcttaaggtctcatgtttgattc 28667696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 28968222 - 28968171
Alignment:
Q  182 ggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||||||||||| ||||||||||||||  ||||||||  ||||||||    
T  28968222 ggttggcttgggatcttggagtttgctcctctagaggtctcagattcgattc 28968171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 8260556 - 8260486
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    ||||||||||||  |||||||||  || | |||||||||||||| ||| |||||||||||  |||||||||    
T  8260556 atttggggttggcttagtggttgagtttgaatcttagagtttgccccttttaaggtctcagcttcgattcc 8260486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 11840915 - 11840972
Alignment:
Q  179 agtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||||| ||||| ||||||||||   |||||||| | ||||||||||    
T  11840915 agtggttggcttgggatattagaatttgctcctccagaggtctcaggctcgattccct 11840972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 3907545 - 3907609
Alignment:
Q  169 gggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||| |||||||||||| |||||||||| | || ||||||||| ||| | ||| |||||||||    
T  3907545 gggttgatctagtggttggtttgggatcttggggtgtgctcctctcaagatttcaagttcgattc 3907609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 17420861 - 17420921
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtct 221  Q
    |||||| |||||||||||| |||||| ||||||||||| |||| | ||||| | |||||||    
T  17420861 cccattcggggttggtctaatggttgacttgggatcttggagtgtactcctttcaaggtct 17420921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 31288147 - 31288072
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||| ||||||| |||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  31288147 cccattttgggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccct 31288072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 32059641 - 32059568
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  32059641 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattcc 32059568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 22392697 - 22392772
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  22392697 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 22392772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 36954814 - 36954889
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||| ||||||||||| ||||||||||||||  |||||||| ||||||||||||    
T  36954814 cccatttggggttggcctagtggttgccttgggatcttggagtttgctcctctagaggtctcaggttcgattccct 36954889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 4603774 - 4603846
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||  ||| ||||| ||||||||||    
T  4603774 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaagatctcaagttcgattcc 4603846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 13038655 - 13038580
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||||||||||   |||||||| ||||||||||||    
T  13038655 cccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 13038580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 13108650 - 13108575
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   || ||||| ||||||||||||    
T  13108650 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccct 13108575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 15641306 - 15641231
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||| | |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  15641306 cccatttggggttagcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 15641231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 19145612 - 19145537
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||| ||||||||||| |||| ||||||||| ||||||||  ||||||||||||    
T  19145612 cccatttggggttggcctagtggttgacttgggatcttggagtatgctcctctcaaggtctccggttcgattccct 19145537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 23270723 - 23270652
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||| ||  ||||||||| ||||||||    
T  23270723 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcatccaaaggtctcaagttcgatt 23270652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 25586928 - 25586999
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||    
T  25586928 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 25586999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 27498932 - 27498857
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||  |||||||||||||||| ||||| ||||||||||||||  |||||||| ||||||||||||    
T  27498932 cccatttggggttgacctagtggttggcttggaatcttggagtttgctcctctagaggtctcaggttcgattccct 27498857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 8484861 - 8484787
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||| ||||||||    
T  8484861 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccct 8484787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 38631161 - 38631087
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||   ||||||||  |||||||||||    
T  38631161 ccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccct 38631087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 930685 - 930612
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    |||||||||||||| | ||||||||||||| ||| ||||||||||||||||| || |||||| |||||||||||    
T  930685 ccatttggggttggcccagtggttggcttgagattttagagtttgctcctctcaaagtctcaggttcgattccc 930612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 12317351 - 12317290
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctc 222  Q
    ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||| |||||||    
T  12317351 cccatttggggttggcctagtggttggcttggaatcttggagtttgctcctcttgaggtctc 12317290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 34049818 - 34049891
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||||||||   |||||||| ||||||||||    
T  34049818 cccatttggggttgggctagtagttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 34049891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 22253345 - 22253277
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcga 230  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||  || ||||| ||||||    
T  22253345 ccatttggggttggtctagtggttggcttgggatctttgactttgctcctctctagatctcaggttcga 22253277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 1827731 - 1827656
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||  ||||||||||||||| |||||| |||||||||||||   |||||||| ||||||||||||    
T  1827731 cccatttggggttgacctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccct 1827656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 11926703 - 11926628
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||||||||||   |||||||| ||| ||||||||    
T  11926703 cccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttagattccct 11926628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 33709694 - 33709627
Alignment:
Q  169 gggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  33709694 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccct 33709627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 34310138 - 34310213
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||| ||||||| ||||| |||||||||||||   |||||||| ||||||||||||    
T  34310138 cccatttggggttggcctagtggtcggcttggaatcttggagtttgctcctccagaggtctcaggttcgattccct 34310213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 37397712 - 37397783
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||| | ||| |||||||    
T  37397712 atttggggttggtctagtggttggcttgtgatcttggagtttgctcctccaaaggtctaaggtttgattccc 37397783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 12398628 - 12398571
Alignment:
Q  182 ggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctatg 239  Q
    ||||||||||||||||| |||||||||||||  ||||||||| |||||||||||||||    
T  12398628 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatg 12398571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 5067297 - 5067348
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    ||||||||| |||||||||||||||| ||||||||||| |||||||||||||    
T  5067297 cccatttggagttggtctagtggttgacttgggatcttcgagtttgctcctc 5067348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 15485493 - 15485418
Alignment:
Q  161 cccatttggggttggtctagtgg-ttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    ||||||||||||||| |||| || ||||||||||| ||| |||| ||||||||| ||||||||| |||||||||||    
T  15485493 cccatttggggttggcctagcgggttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattccc 15485418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 38684204 - 38684279
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||| |||||||||| | |||||||| ||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  38684204 cccacttggggttggcccagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 38684279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 25750811 - 25750761
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    |||||||||||||| |||||||||| ||||||||||| |||||||||||||    
T  25750811 ccatttggggttggcctagtggttgacttgggatcttggagtttgctcctc 25750761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 40330629 - 40330707
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctatg 239  Q
    |||||||| ||||||  |||||||| ||||| |||||| |||||||||||||| ||||||||| |||| |||| |||||    
T  40330629 cccatttgaggttggcttagtggttagcttgagatcttggagtttgctcctctcaaggtctcaagttcaattctctatg 40330707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 15971321 - 15971252
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||| |||||||  ||||||||||||||||||||| |||||||||||||   |||||||| ||||||||    
T  15971321 catttagggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 15971252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 3715107 - 3715059
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  3715107 atttggggttggcctagtggttggtttgggatcttggagtttgctcctc 3715059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 21042724 - 21042664
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctca 223  Q
    |||||||||||||| ||||| |||| |||||||||| |||||||||||| | |||||||||    
T  21042724 catttggggttggtttagtgattggtttgggatcttggagtttgctcctttcaaggtctca 21042664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 30485824 - 30485896
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||||||||| | || ||||||||||||||||| ||||||||||||    |||||||| |||||||||    
T  30485824 cccatttggggttggcccagcggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattc 30485896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 7085827 - 7085752
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||| |||  ||||||||||||||||||||| |||||| ||||||   |||||||  ||||||||||||    
T  7085827 cccatttggggctggcttagtggttggcttgggatcttggagttttctcctccagaggtctccggttcgattccct 7085752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 15931055 - 15931102
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgct 208  Q
    ||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  15931055 cccatttggggttggcctagtggttagcttgggatcttggagtttgct 15931102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 28614684 - 28614614
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||| |||||  ||| ||||| ||||||||    
T  28614684 cccatttggggttggtg-agtggttggcttgagatcttagagtttgttcctccaaagatctcaggttcgatt 28614614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 37495059 - 37495118
Alignment:
Q  177 ctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||| |||||||||||||   |||||||| ||||||||||||    
T  37495059 ctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccct 37495118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 232
Target Start/End: Complemental strand, 16074108 - 16074042
Alignment:
Q  166 ttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    |||||||||| ||| ||||||| ||| ||||||||||| |||| |||| ||||||||| ||||||||    
T  16074108 ttggggttggcctaatggttggattgagatcttagagtatgctactctcaaggtctcaagttcgatt 16074042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 33025476 - 33025538
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctca 223  Q
    ||||||||||||||| || | ||||||||||||||||| |||| ||||||||| ||| |||||    
T  33025476 cccatttggggttggcctcgcggttggcttgggatcttggagtgtgctcctctcaagatctca 33025538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 36895438 - 36895496
Alignment:
Q  178 tagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||| || |||||||||||| |||| ||||||||| ||||| ||||||||||||||||    
T  36895438 tagtgattagcttgggatcttggagtgtgctcctctcaaggtttcatgttcgattccct 36895496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 42006791 - 42006837
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctc 209  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||||||    
T  42006791 catttggggttgggctagtggttggcttgagatcttggagtttgctc 42006837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 10869760 - 10869693
Alignment:
Q  167 tggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    |||||||||  | ||||||| |||| |||||| |||||||||||||  ||||||||| ||||||||||    
T  10869760 tggggttggcatggtggttgacttgcgatcttggagtttgctcctccaaaggtctcaggttcgattcc 10869693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 11465108 - 11465037
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||| ||||||| |||||| ||||||||  ||||| |||||||||||||  || |||||| ||||||||    
T  11465108 cccatttcgggttggcctagtgattggcttgaaatcttggagtttgctcctccaaatgtctcaggttcgatt 11465037  T

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Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 16616115 - 16616186
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    |||||||| | ||||  |||| |||||||||||||||| |||||||||||||| ||| |||||  |||||||    
T  16616115 cccatttgagattggcttagtagttggcttgggatcttggagtttgctcctctaaagatctcagattcgatt 16616186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 10399770 - 10399816
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgct 208  Q
    |||||||| |||||||||||||||| ||| ||||||| |||||||||    
T  10399770 ccatttggtgttggtctagtggttgactttggatcttggagtttgct 10399816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 2499376 - 2499307
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||||||  |||||| || ||||||||||| || ||||||||| | || |||||| |||||||||    
T  2499376 atttggggttggcttagtggctgacttgggatcttggaatttgctcctttcaaagtctcaggttcgattc 2499307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 14302898 - 14302829
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    |||||| | ||| ||||||||||| |||||||||||||||| |||| ||||  |||||||| ||| ||||    
T  14302898 catttgagtttgatctagtggttgacttgggatcttagagtgtgcttctctagaggtctcaggtttgatt 14302829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 14656694 - 14656645
Alignment:
Q  183 gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||| || ||| |||||||||||||| ||||||||| ||||||||    
T  14656694 gttggcttgagaccttggagtttgctcctctcaaggtctcaggttcgatt 14656645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 19456389 - 19456340
Alignment:
Q  182 ggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgat 231  Q
    ||||||||||||||||| |||||||||||||   |||||||| |||||||    
T  19456389 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgat 19456340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 26009463 - 26009390
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||| || | ||||||||||| ||||||||| ||||||| ||||||  ||||| ||  ||||||||||||    
T  26009463 catttgggttttgcctagtggttggtttgggatctcagagtttactcctcgaaaggtttccggttcgattccct 26009390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 204221 - 204177
Alignment:
Q  165 tttggggttggtctagtggttggcttgggatcttagagtttgctc 209  Q
    ||||| |||||||||||||||| |||| |||||| ||||||||||    
T  204221 tttggagttggtctagtggttgacttgtgatcttggagtttgctc 204177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 18207226 - 18207278
Alignment:
Q  184 ttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||| |||||||||| |||||||||||||   |||||||| ||||||||||||    
T  18207226 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 18207278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 8192552 - 8192477
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||||| ||||||||||||    
T  8192552 cccatttggggttggcctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccct 8192477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 18976626 - 18976551
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||    
T  18976626 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccct 18976551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 44946254 - 44946179
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  44946254 cccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 44946179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 11941411 - 11941333
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctatg 239  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||   |||||||| |||| ||||||||||    
T  11941411 cccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctatg 11941333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 15037955 - 15038030
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||| || |||||||| |||||||||||||  ||||||||| ||||||||||||    
T  15037955 cccatttggggttggcctagtggttgactcgggatcttggagtttgctcctccaaaggtctcaggttcgattccct 15038030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 25293162 - 25293237
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||| ||||||||||||||||| ||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  25293162 cccatttgaggttggtctagtggttgacttgggatcttggagtttgctcctcgagaggtctcaggttcgattccct 25293237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 33827774 - 33827699
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||||||||||| ||| |||||||||   |||||||| ||||||||||||    
T  33827774 cccatttggggttggcctagtggttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccct 33827699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 40997551 - 40997477
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    |||||||| ||| ||||||||||||| ||||||||||| |||||||||||||  |||||||||||||| ||||||    
T  40997551 cccatttgaggtgggtctagtggttgacttgggatcttggagtttgctcctccaaaggtctcatgttcaattccc 40997477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 44976353 - 44976280
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||| |||||||||||||||||||||| | |||||||||||   |||||||| ||||||||||||    
T  44976353 catttggggttggcctagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccct 44976280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 27269551 - 27269476
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||||||||| ||||| | | ||| ||||||||    
T  27269551 cccatttggggttggcatagtggttggcttgggatcttcgagtttgctcctctaaaggttttaggtttgattccct 27269476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 4852556 - 4852629
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||  |||||||||| ||||| ||||| |||||||||||||  ||||||||| ||||||||||||    
T  4852556 catttggggttgacctagtggttgacttggaatcttggagtttgctcctccaaaggtctcaggttcgattccct 4852629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 17324764 - 17324837
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||| ||||||||||| |||| ||||| |||||||||||||   |||||||| ||||||||||||    
T  17324764 catttggggttggcctagtggttggtttggtatcttggagtttgctcctccagaggtctcaggttcgattccct 17324837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 30467031 - 30466959
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||||||||| ||||||||||| ||||||| || ||||||| ||||||  |||||||| |||||||||    
T  30467031 cccatttggggttggcctagtggttggtttgggatattggagtttgttcctctagaggtctcaggttcgattc 30466959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 41329842 - 41329914
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||||||  ||||| |||  |||||||||||    
T  41329842 atttggggttggcctagtggttagtttgggatcttagagtttgctcctccaaaggtttcagattcgattccct 41329914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 19606030 - 19605971
Alignment:
Q  177 ctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||||||||| ||||  |||||||| ||||||||| ||||||||||||    
T  19606030 ctagtggttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgattccct 19605971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 27290600 - 27290659
Alignment:
Q  177 ctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  27290600 ctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 27290659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 32526286 - 32526211
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||| |||||  |||||||||  ||||||||||  ||||||||||||| ||||||||| ||||||||||||    
T  32526286 cccatttggagttggcttagtggttgatttgggatcttgaagtttgctcctctcaaggtctcaggttcgattccct 32526211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 32845087 - 32845162
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| ||||| ||| |||||||||||| |||||||||||||  || || ||| ||||||||||||    
T  32845087 cccatttggggttggcctagtagttagcttgggatcttggagtttgctcctccaaaagtttcaggttcgattccct 32845162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 41313988 - 41314063
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||   |||||||||| |||||||||| |||||||||||||   |||||||| ||||||||||||    
T  41313988 cccatttggggttgccgtagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 41314063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 10582174 - 10582116
Alignment:
Q  178 tagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  10582174 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 10582116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 33901512 - 33901570
Alignment:
Q  175 gtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||| |||| ||||||||||||| ||||||||||| ||||||||| |||||    
T  33901512 gtctagtggttgacttgagatcttagagtttactcctcttaagatctcatgtttgattc 33901570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 4618880 - 4618815
Alignment:
Q  167 tggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||| |||||||||||||||| ||||| |||| ||||||||| ||||| ||| ||||||||    
T  4618880 tggggttggcctagtggttggcttggaatcttggagtatgctcctctcaaggtttcaggttcgatt 4618815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 28194335 - 28194262
Alignment:
Q  161 cccatttggggttggtctagtggtt-ggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||||||  ||||| || ||||||||||||| |||| ||||||||||||||||| | |||||||||    
T  28194335 cccatttggggttggcgtagtgatttggcttgggatcttggagtgtgctcctcttaaggtcttaggttcgattc 28194262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 36390767 - 36390698
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||||| ||||||||||| |||||||||  ||||||||| |||  ||||||||| ||||||||    
T  36390767 cccatttggggttggcctagtggttggtttgggatct--gagtttgcttctccaaaggtctcaggttcgatt 36390698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 19054019 - 19054094
Alignment:
Q  159 accccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    |||||||||||||| || |||||| |||||||| |||||| |||| ||||||||  ||||||||| ||| ||||||    
T  19054019 accccatttggggtgggcctagtgattggcttgagatcttggagtctgctcctccaaaggtctcaggtttgattcc 19054094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 24196000 - 24196075
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| ||||||||||||||||||| || | ||| |||||||   |||| ||| ||||||||||||    
T  24196000 cccatttggggttggcctagtggttggcttgggattttggggttcgctcctccagaggtttcaggttcgattccct 24196075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 5394034 - 5394088
Alignment:
Q  182 ggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||| |||||| |||||||||||||  ||||||||| ||||||||||||    
T  5394034 ggttggcttgagatcttggagtttgctcctccaaaggtctcaggttcgattccct 5394088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 31536204 - 31536274
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgat 231  Q
    |||||||||| || |||||| ||||||||||||||||| ||||  | ||||||||| |||||| |||||||    
T  31536204 cccatttgggattagtctagcggttggcttgggatcttggagtgcgttcctcttaaagtctcaagttcgat 31536274  T

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Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 45271401 - 45271455
Alignment:
Q  182 ggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||||||||||||||| |||   |||| ||||||||||||||||    
T  45271401 ggttggcttgggatcttagagtttgcttctccagaggtttcatgttcgattccct 45271455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 4567637 - 4567588
Alignment:
Q  162 ccatttggggttggtctagtggttggcttgggatcttagagtttgctcct 211  Q
    |||||||||||||| ||||| ||||||||||||||||  |||||||||||    
T  4567637 ccatttggggttggcctagtagttggcttgggatcttgaagtttgctcct 4567588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 6714482 - 6714409
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    |||||||||| |||| ||| ||||||||||| |||||| |||||||||||||   |||||||| ||| ||||||    
T  6714482 cccatttgggattggcctaatggttggcttgagatcttggagtttgctcctccagaggtctcaggtttgattcc 6714409  T

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Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 1845858 - 1845806
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctct 213  Q
    |||| |||||||||||  | |||||||||||||||||| ||||||||||||||    
T  1845858 cccacttggggttggtacattggttggcttgggatcttggagtttgctcctct 1845806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 20297559 - 20297631
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatc-ttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||||| | |||||||||||||||||| || || | ||||||||| |||||||||  |||||||    
T  20297559 cccatttggggttggcccagtggttggcttgggatctttggaatgtgctcctctcaaggtctcagattcgatt 20297631  T

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Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 38784377 - 38784309
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||| ||||||| |||| || ||||||| |||||||||||||| ||| ||| | ||||||||    
T  38784377 atttggggttgatctagtgtttgggttaggatcttggagtttgctcctctcaagttctaaggttcgatt 38784309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 6099570 - 6099519
Alignment:
Q  182 ggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||||||| ||| |||| ||||||||| ||||||||| |||||||||    
T  6099570 ggttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattc 6099519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 14946775 - 14946846
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||| ||||| |||||||||| |||| ||||||  ||||||||||||| ||||| | | ||||||||    
T  14946775 cccatttggagttggcctagtggttgacttgagatcttgaagtttgctcctctcaaggttttaggttcgatt 14946846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 918898 - 918848
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctct 213  Q
    ||||||||||||  ||||||||||||||||||| ||  |||||||||||||    
T  918898 catttggggttgacctagtggttggcttgggattttgaagtttgctcctct 918848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 43374505 - 43374451
Alignment:
Q  182 ggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||||| ||||||||||||    |||||||| ||||||||||||    
T  43374505 ggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccct 43374451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 5861275 - 5861320
Alignment:
Q  177 ctagtggttggcttgggatcttagagtttgctcctcttaaggtctc 222  Q
    ||||||||||||||| |||||| || ||||||||||| ||||||||    
T  5861275 ctagtggttggcttgtgatcttggaatttgctcctctcaaggtctc 5861320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 18691980 - 18692053
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||| ||| ||||| |||||| || || |||| ||||| ||| ||| ||||| ||||||||||||    
T  18691980 catttggggttggcctaatggtttgcttggaattttggagtgtgctcatctcaagatctcaggttcgattccct 18692053  T

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Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 29698164 - 29698205
Alignment:
Q  182 ggttggcttgggatcttagagtttgctcctcttaaggtctca 223  Q
    ||||||||||||||||| || ||||||||||| |||||||||    
T  29698164 ggttggcttgggatcttggaatttgctcctctcaaggtctca 29698205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 38341754 - 38341807
Alignment:
Q  182 ggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    ||||| |||||||||||  ||||||||||||| |||||||||  ||||||||||    
T  38341754 ggttgacttgggatcttgaagtttgctcctctcaaggtctcagattcgattccc 38341807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 43964055 - 43963987
Alignment:
Q  169 gggttggtctagtggt--tggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    ||||||||||||| ||  ||| |||||| ||| |||| ||||||||| ||||||||||||| |||||||    
T  43964055 gggttggtctagtagtgttggtttgggaccttggagtgtgctcctctcaaggtctcatgtttgattccc 43963987  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 34516589 - 34516537
Alignment:
Q  181 tggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    |||||||||||||||||| |||||||||||||   |||| ||| |||||||||    
T  34516589 tggttggcttgggatcttggagtttgctcctccagaggtttcaggttcgattc 34516537  T

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Target: scaffold0049 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 66758 - 66831
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattcc 234  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||    
T  66758 cccatttgggattggtctagtggttggcttgggatcttggagtttgctcctccaaaggtctcacgttcgattcc 66831  T

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Target: scaffold0028 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 27772 - 27847
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||||||||||||||| ||||||| || |||||||||||||| ||||||||  ||||||||||||    
T  27772 cccatttggggttggtctagtggttggtttgggattttggagtttgctcctctcaaggtctcgggttcgattccct 27847  T

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Target: scaffold0026 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 97567 - 97492
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||||||  ||||||||| ||||||||||||    
T  97567 cccatttggggttggcctagtggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccct 97492  T

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Target: scaffold0623 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 1255 - 1182
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  1255 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 1182  T

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Target: scaffold0366 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 9498 - 9425
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  9498 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 9425  T

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Target: scaffold0366; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 12199 - 12130
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||    
T  12199 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 12130  T

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Target: scaffold0460 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 8380 - 8305
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||||||| |||||||||||| |||||||| |||||||||||||   |||||||| ||||||||||||    
T  8380 cccatttggggttggtttagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccct 8305  T

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Target: scaffold0199 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 8608 - 8537
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||    
T  8608 cccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 8537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 41845 - 41770
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||| ||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  41845 cccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 41770  T

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Target: scaffold0459 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 10892 - 10823
Alignment:
Q  163 catttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||   |||||||| ||||||||    
T  10892 catttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 10823  T

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Target: scaffold0328 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 14987 - 15062
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||||||||||   |||||||| |||| |||||||    
T  14987 cccatttggggttggcctagtggttggcctgggatcttggagtttgctcctccagaggtctcaggttcaattccct 15062  T

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Target: scaffold0070 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 40321 - 40396
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||| ||||||| ||||||||||||    |||||||| ||||||||||||    
T  40321 cccatttggggttggcctagtggttggcttaggatcttggagtttgctccttcagaggtctcaggttcgattccct 40396  T

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Target: scaffold0217 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 7507 - 7435
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||||||   || ||||| ||||||||||||    
T  7507 atttggggttggcctagtagttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccct 7435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 53072 - 53021
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
    |||||||||| |||| |||||||||||||||||||||| |||||||||||||    
T  53072 cccatttgggattggcctagtggttggcttgggatcttggagtttgctcctc 53021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 150 - 84
Alignment:
Q  170 ggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    |||||| ||||||||||||||| |||||| |||||||||| ||   |||||||| ||||||||||||    
T  150 ggttggcctagtggttggcttgtgatcttggagtttgctcgtccagaggtctcaggttcgattccct 84  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 26744 - 26672
Alignment:
Q  161 cccatttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattc 233  Q
    ||||||||||||||| ||| |||||||||| ||||||| |||||||||  ||   |||||||||||| |||||    
T  26744 cccatttggggttggcctactggttggcttaggatcttggagtttgcttttcaagaggtctcatgtttgattc 26672  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 161828 - 161880
Alignment:
Q  184 ttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccct 236  Q
    ||||||||||||||| |||||||||||||   |||||||| ||||||||||||    
T  161828 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccct 161880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 29340 - 29269
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccc 235  Q
    ||||||| |||| |||||||||||||||| |||||  ||| || |||||| ||||||| | |||||||||||    
T  29340 atttgggattggcctagtggttggcttggaatcttgaagtgtgttcctctcaaggtcttaggttcgattccc 29269  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 240936 - 240887
Alignment:
Q  183 gttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgatt 232  Q
    ||||| |||||||||| |||| ||||||||| ||||||||||||| ||||    
T  240936 gttggtttgggatcttggagtatgctcctctcaaggtctcatgtttgatt 240887  T

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Target: scaffold0240 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 12952 - 12904
Alignment:
Q  164 atttggggttggtctagtggttggcttgggatcttagagtttgctcctc 212  Q
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T  12952 atttgggattggcctagtggttgacttgggatcttggagttcgctcctc 12904  T

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