View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2774_low_9 (Length: 251)
Name: NF2774_low_9
Description: NF2774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2774_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 20 - 245
Target Start/End: Original strand, 11314077 - 11314302
Alignment:
| Q |
20 |
attatcaccccattttttaattatgtaaaaagactaaagttttgattaaattttcttgtagggttgagcttttgattcttgggttgtgtgacaacattaa |
119 |
Q |
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| T |
11314077 |
attatcacctcattttttaattatgtaaaaagactaaagttttgattaaattttcttgtagggttgagcttttgattcttgggttgtgtgacaacattaa |
11314176 |
T |
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| Q |
120 |
actgcacgtcaaagttaacaagtttaagactgtttggttggtgtgttcaaaaaatggaaacttgtacggctctattacttttaacggccataacagctta |
219 |
Q |
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| T |
11314177 |
actgcacatcaaagttaacaagtttaagactgtttggttggtgtgttcaaaaaatggaaacttgtacggctctattacttttaacggccataacagctta |
11314276 |
T |
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| Q |
220 |
cttgctttggttcaccttcatctcac |
245 |
Q |
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|||||||||||||||||||||||||| |
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| T |
11314277 |
cttgctttggttcaccttcatctcac |
11314302 |
T |
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