View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2775_high_4 (Length: 320)

Name: NF2775_high_4
Description: NF2775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2775_high_4
NF2775_high_4
[»] chr7 (1 HSPs)
chr7 (10-303)||(7750469-7750762)


Alignment Details
Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 10 - 303
Target Start/End: Original strand, 7750469 - 7750762
Alignment:
Q  10 ccaagaacgatggaattggtccactaagtctgtttgtgtccagcacaaggaggttaaggtttgtcagcttgctcaaggaatttggtattgtaccggtgag 109  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7750469 ccaagaacgatggaattggtccactaagtctgtttgtgtcgagcacaaggaggttaaggtttgtcagcttgctcaaggaattcggtattgtaccggtgag 7750568  T
Q  110 atggtttgcgcgaagattgagattattaagtctagacagttgaccaagagatgacggtatagagccagaaaatctgttggcgtaaagcatgagccctgtt 209  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7750569 atggtttgcgcgaaggttgagattattaagtctagacagttgaccaagagatgatggtatagagccagaaaatctgttggcgtaaagcatgagccctgtt 7750668  T
Q  210 agcctcttgagccggcccagggagggtgggattgggccggaaagtttgtttgctccaaaggtaatgctaatgaggttcgtcagttggctaagag 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7750669 agcctcttgagccggcccagggagggtgggattgggccggaaagtttgtttgctccaaagttaatgctaatgaggttcgtcagttggctaagag 7750762  T

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