View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2776_high_5 (Length: 311)
Name: NF2776_high_5
Description: NF2776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2776_high_5 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 9 - 311
Target Start/End: Original strand, 35754924 - 35755240
Alignment:
| Q |
9 |
agcaaaggacatcaaagttacaagaattatacctctcatttcattactgtaggtataattcttaaattacaaacaccatgaaccataaagtcatcttgat |
108 |
Q |
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| T |
35754924 |
agcaaaggtcatcaaagttacaagaattatacctctcatttcattactgtaggtataattcttaaattacaaacaccatgaaccataaagtcatcttgat |
35755023 |
T |
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| Q |
109 |
gactgtaacaaaaatgaaaaatacataattcttcttatatgatgtaatt--------------ctaaccaagttaacaaaacttatatcctcaactactt |
194 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |
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| T |
35755024 |
gactgtaacaaaactgaaaaatacataattcttcttatatgatgtaatatcacatatataacaccaaccaagttaacaaaacttatatcctcaactactt |
35755123 |
T |
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| Q |
195 |
tcacaaaacaggcctttcagcagctttatagagtctttgcttgcttgcttgcagcacaaagcatttgatctacatttaccttgtccatcctcctcctctt |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35755124 |
tcacaaaacaggcctttcagcagctttatagagtctttgcttgcttgcttgcagcacaaagcatttgatctacatttaccttgtccatcctcctcctctt |
35755223 |
T |
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| Q |
295 |
cctctatttcttcctct |
311 |
Q |
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||||||||||||||||| |
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| T |
35755224 |
cctctatttcttcctct |
35755240 |
T |
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