View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2776_low_15 (Length: 254)
Name: NF2776_low_15
Description: NF2776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2776_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 7446971 - 7447210
Alignment:
| Q |
1 |
aagggagcaacactcagaagcattaaagctaagggagcaactctcagaagctgagaaagaaattcaaaggcttcgagagccatttgaaagggtaacaagc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7446971 |
aagggagcaacactcagaagcattaaagctaagggagcaactctcagaagctgagaaagaaattcaaaggcttcgagagccatttgaaagggtaacaagc |
7447070 |
T |
|
| Q |
101 |
agcagttcaagtacttcatccatgtctcagtcagtggaagttgtggacccaccttttcttggtgaatttggtgttgataacggatatgatgatcacgtat |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
7447071 |
agcagttcaagtacttcatccatgtctcagtcagtggaagttgtggacccaccttttcttggtgaatttggtgttgataacggatatgatgacgacgtat |
7447170 |
T |
|
| Q |
201 |
ttttcatggctaatgaaacatgttactacaatggcatgga |
240 |
Q |
| |
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|||||||| | ||||||||||||||||||||||||||||| |
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| T |
7447171 |
ttttcatgcccaatgaaacatgttactacaatggcatgga |
7447210 |
T |
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