View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2776_low_7 (Length: 312)
Name: NF2776_low_7
Description: NF2776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2776_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 92 - 302
Target Start/End: Original strand, 8509323 - 8509534
Alignment:
| Q |
92 |
ctcataactaacaaaaacaagaattgggccacaagactagtaagtagcaacttctttaatcatggcctgagatgaagaatttaaacacatccaatttcag |
191 |
Q |
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| T |
8509323 |
ctcataactaacaaaaacaagaattgggccacaagactaataagtagcaacttctttaatcatggcctgagatgaagaatttaaacacatccaatttcag |
8509422 |
T |
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| Q |
192 |
ttacttacattttaggtcacatgttaagtgagtgagataggaaagaagcaaaactaatgcatg-aaaaaatttggtggctaattttcatacttttccctt |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
8509423 |
ttacttacattttaggtcacatgttaagtgagtgagataggaaagaagcaaaactaatgcatgaaaaaaatttggtggctaattttcatacttttccctt |
8509522 |
T |
|
| Q |
291 |
aacttgatgatg |
302 |
Q |
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||| |||||||| |
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| T |
8509523 |
aacatgatgatg |
8509534 |
T |
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