View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2777_low_9 (Length: 317)
Name: NF2777_low_9
Description: NF2777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2777_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 164263 - 163959
Alignment:
| Q |
1 |
tggtatttttggaactttcttgttttgacagattgataaagggtcaccaacnnnnnnnggtttacgccaccaaaaagatggagaaagggtcgaagttgga |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
164263 |
tggtatttttggaactttcttgttttgacagattgataaagggtcaccaacaaaaaaaggtttacgccaccaaaaagatggagaaagggtcgaagttgga |
164164 |
T |
|
| Q |
101 |
annnnnnnnnngagtactattcaactcaatttatgtaactcttttgtatctcttatagactcattgctagtagattgaagagcttctatccctagacgta |
200 |
Q |
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| T |
164163 |
attttttttt-gagtactattcaactcaatttatgtaactcttttgtatctcttatagactcattgctagtagattgaagagcttctatccctagactta |
164065 |
T |
|
| Q |
201 |
ggttaatttgggtcaaactgagtaaataatatcttggtatgtttttcctatactctatttatatatcttgtttatctttagcttgattgtttacattttc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
164064 |
ggttaatttgggtcaaactgagtaaataatatcttggtatgtttttcctatactctatttatatatcttgtttatctttagcttgattgtttacattttc |
163965 |
T |
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| Q |
301 |
atttca |
306 |
Q |
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|||||| |
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| T |
163964 |
atttca |
163959 |
T |
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