View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2778_high_8 (Length: 240)

Name: NF2778_high_8
Description: NF2778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2778_high_8
NF2778_high_8
[»] chr4 (55 HSPs)
chr4 (49-220)||(11028081-11028253)
chr4 (48-221)||(7608977-7609151)
chr4 (48-221)||(6481949-6482123)
chr4 (49-221)||(55826538-55826711)
chr4 (52-221)||(44317542-44317712)
chr4 (49-221)||(26564838-26565011)
chr4 (49-221)||(43893235-43893407)
chr4 (49-221)||(5902535-5902702)
chr4 (65-221)||(6382203-6382360)
chr4 (49-221)||(11122784-11122957)
chr4 (49-221)||(48459488-48459661)
chr4 (49-221)||(21423868-21424041)
chr4 (71-221)||(47550290-47550441)
chr4 (132-221)||(1724309-1724398)
chr4 (73-221)||(15987201-15987350)
chr4 (49-221)||(31918473-31918646)
chr4 (49-221)||(39046959-39047132)
chr4 (73-219)||(42299799-42299944)
chr4 (49-221)||(32585496-32585663)
chr4 (133-219)||(32596184-32596270)
chr4 (65-221)||(31752463-31752620)
chr4 (49-169)||(37349171-37349292)
chr4 (116-216)||(47239368-47239468)
chr4 (49-172)||(1724185-1724308)
chr4 (137-220)||(12825465-12825548)
chr4 (132-219)||(14605924-14606011)
chr4 (135-222)||(29527818-29527905)
chr4 (107-206)||(37107433-37107531)
chr4 (111-222)||(47103744-47103855)
chr4 (144-221)||(19534462-19534539)
chr4 (83-207)||(19883005-19883130)
chr4 (134-222)||(10574420-10574508)
chr4 (134-222)||(21544585-21544673)
chr4 (71-221)||(39375285-39375436)
chr4 (131-213)||(4741214-4741296)
chr4 (134-220)||(31782621-31782707)
chr4 (144-222)||(45065255-45065333)
chr4 (141-221)||(33516079-33516160)
chr4 (97-216)||(10302096-10302216)
chr4 (134-222)||(30266331-30266419)
chr4 (134-222)||(30285769-30285857)
chr4 (111-222)||(31415909-31416020)
chr4 (137-219)||(25941147-25941229)
chr4 (132-182)||(43309529-43309579)
chr4 (116-221)||(8843788-8843892)
chr4 (116-221)||(8856752-8856856)
chr4 (48-181)||(19548852-19548985)
chr4 (85-188)||(7985076-7985180)
chr4 (138-206)||(36306807-36306875)
chr4 (49-124)||(425867-425942)
chr4 (107-166)||(7334171-7334230)
chr4 (134-221)||(9230289-9230376)
chr4 (134-221)||(25298834-25298921)
chr4 (112-219)||(35304495-35304602)
chr4 (134-215)||(3737789-3737870)
[»] chr6 (44 HSPs)
chr6 (49-221)||(2367327-2367500)
chr6 (48-221)||(32853845-32854019)
chr6 (50-221)||(5863298-5863470)
chr6 (95-221)||(27738773-27738900)
chr6 (49-221)||(3483837-3484010)
chr6 (49-221)||(27534685-27534858)
chr6 (49-180)||(10187994-10188126)
chr6 (49-192)||(30986283-30986427)
chr6 (132-218)||(20349068-20349154)
chr6 (84-220)||(10142467-10142604)
chr6 (134-219)||(29199885-29199970)
chr6 (80-221)||(30816261-30816401)
chr6 (49-221)||(12141386-12141559)
chr6 (144-221)||(14410865-14410942)
chr6 (132-221)||(24225699-24225788)
chr6 (94-221)||(11762446-11762574)
chr6 (134-221)||(24602856-24602943)
chr6 (132-222)||(18908893-18908983)
chr6 (132-218)||(28079694-28079780)
chr6 (132-221)||(12309573-12309662)
chr6 (91-221)||(32053089-32053214)
chr6 (134-213)||(14506095-14506174)
chr6 (107-206)||(20610955-20611054)
chr6 (49-191)||(31496465-31496608)
chr6 (49-191)||(31501851-31501994)
chr6 (1-47)||(10551479-10551525)
chr6 (134-219)||(7393887-7393972)
chr6 (112-221)||(12678072-12678181)
chr6 (144-213)||(32532549-32532618)
chr6 (111-219)||(9458861-9458969)
chr6 (83-189)||(9442463-9442569)
chr6 (91-221)||(15498325-15498456)
chr6 (66-219)||(5108862-5109016)
chr6 (116-221)||(13769073-13769178)
chr6 (131-183)||(19367048-19367100)
chr6 (134-214)||(32959868-32959948)
chr6 (95-221)||(29341257-29341384)
chr6 (136-221)||(8320797-8320882)
chr6 (49-124)||(14034588-14034664)
chr6 (55-182)||(14254998-14255125)
chr6 (138-220)||(9402591-9402672)
chr6 (83-128)||(9402670-9402716)
chr6 (144-221)||(256502-256579)
chr6 (69-122)||(14410802-14410855)
[»] chr5 (44 HSPs)
chr5 (49-221)||(4920827-4921000)
chr5 (49-208)||(33727916-33728076)
chr5 (49-221)||(4583120-4583293)
chr5 (73-221)||(30996597-30996745)
chr5 (49-218)||(20973411-20973581)
chr5 (49-221)||(18207020-18207192)
chr5 (48-221)||(22694816-22694989)
chr5 (49-221)||(5908603-5908776)
chr5 (49-221)||(40517807-40517980)
chr5 (71-221)||(12866488-12866639)
chr5 (49-180)||(10127116-10127248)
chr5 (71-221)||(12834511-12834662)
chr5 (107-221)||(42987453-42987567)
chr5 (73-221)||(15890208-15890356)
chr5 (48-221)||(29245865-29246039)
chr5 (49-221)||(17853208-17853380)
chr5 (49-188)||(13401919-13402059)
chr5 (134-218)||(38006470-38006554)
chr5 (49-218)||(6155835-6156003)
chr5 (49-124)||(12447467-12447542)
chr5 (132-218)||(28569020-28569106)
chr5 (111-221)||(38972923-38973033)
chr5 (158-221)||(35194014-35194077)
chr5 (83-165)||(3564688-3564770)
chr5 (55-128)||(42717551-42717625)
chr5 (137-222)||(2681216-2681301)
chr5 (137-221)||(6810159-6810243)
chr5 (48-196)||(24207710-24207858)
chr5 (48-219)||(40187571-40187742)
chr5 (150-213)||(35311831-35311894)
chr5 (132-222)||(23044990-23045080)
chr5 (107-221)||(28045657-28045770)
chr5 (138-215)||(10822531-10822608)
chr5 (136-221)||(32574941-32575026)
chr5 (174-222)||(18116547-18116595)
chr5 (174-222)||(43523759-43523807)
chr5 (134-221)||(12447382-12447469)
chr5 (149-191)||(8453389-8453431)
chr5 (132-222)||(12250970-12251060)
chr5 (49-175)||(27088288-27088413)
chr5 (144-221)||(8020616-8020693)
chr5 (137-222)||(12712561-12712646)
chr5 (141-206)||(27302743-27302808)
chr5 (134-218)||(2985151-2985235)
[»] chr1 (51 HSPs)
chr1 (48-221)||(44615388-44615562)
chr1 (48-221)||(44793007-44793181)
chr1 (49-221)||(9982804-9982977)
chr1 (49-221)||(51421860-51422033)
chr1 (49-221)||(24236675-24236848)
chr1 (49-221)||(36187134-36187307)
chr1 (49-221)||(49250687-49250860)
chr1 (107-216)||(18354053-18354162)
chr1 (49-216)||(17134954-17135122)
chr1 (49-221)||(12495012-12495185)
chr1 (49-220)||(34673196-34673368)
chr1 (49-191)||(5181071-5181214)
chr1 (91-221)||(16408944-16409075)
chr1 (49-213)||(19572426-19572591)
chr1 (49-221)||(23490685-23490858)
chr1 (49-181)||(23968621-23968754)
chr1 (49-221)||(29871200-29871372)
chr1 (65-221)||(29936418-29936581)
chr1 (67-191)||(24710879-24711004)
chr1 (49-221)||(34611075-34611248)
chr1 (144-221)||(28297936-28298013)
chr1 (49-164)||(13390456-13390571)
chr1 (137-219)||(48125686-48125768)
chr1 (144-213)||(3627995-3628064)
chr1 (145-222)||(10450070-10450147)
chr1 (49-213)||(40087378-40087542)
chr1 (49-113)||(38106316-38106380)
chr1 (49-221)||(45866100-45866272)
chr1 (49-221)||(16433093-16433251)
chr1 (49-124)||(20774665-20774741)
chr1 (68-191)||(39616324-39616448)
chr1 (107-195)||(42707810-42707898)
chr1 (144-215)||(34060035-34060106)
chr1 (144-199)||(44632151-44632206)
chr1 (107-181)||(33293504-33293578)
chr1 (116-222)||(35069871-35069977)
chr1 (145-215)||(50426672-50426742)
chr1 (144-213)||(10778577-10778646)
chr1 (138-222)||(16237308-16237392)
chr1 (133-221)||(16903525-16903613)
chr1 (49-128)||(28298041-28298121)
chr1 (135-219)||(39219262-39219346)
chr1 (132-199)||(19003664-19003731)
chr1 (132-191)||(35936827-35936886)
chr1 (137-176)||(38686709-38686748)
chr1 (132-219)||(42439668-42439755)
chr1 (132-222)||(23058467-23058557)
chr1 (49-110)||(5283519-5283580)
chr1 (132-221)||(13798240-13798329)
chr1 (49-118)||(49740940-49741009)
chr1 (132-220)||(12718770-12718858)
[»] chr8 (37 HSPs)
chr8 (69-221)||(37960896-37961049)
chr8 (49-218)||(43113540-43113710)
chr8 (49-221)||(32303062-32303235)
chr8 (49-221)||(20399593-20399766)
chr8 (48-188)||(5858565-5858706)
chr8 (49-221)||(24927950-24928123)
chr8 (49-221)||(17469256-17469417)
chr8 (49-213)||(27932422-27932588)
chr8 (49-218)||(1063511-1063687)
chr8 (73-221)||(29108760-29108909)
chr8 (49-221)||(39445490-39445663)
chr8 (49-219)||(1012622-1012792)
chr8 (49-218)||(34777070-34777234)
chr8 (91-221)||(34139449-34139578)
chr8 (81-218)||(24568942-24569079)
chr8 (85-216)||(40248321-40248453)
chr8 (53-191)||(4230648-4230787)
chr8 (132-219)||(14687402-14687489)
chr8 (107-221)||(24869997-24870111)
chr8 (49-173)||(2075748-2075873)
chr8 (134-213)||(9642351-9642430)
chr8 (69-209)||(35215549-35215689)
chr8 (94-221)||(45236066-45236194)
chr8 (49-219)||(27777112-27777283)
chr8 (132-222)||(15068586-15068675)
chr8 (49-218)||(36131843-36132001)
chr8 (138-221)||(17084111-17084194)
chr8 (84-174)||(17220760-17220851)
chr8 (85-221)||(14155533-14155670)
chr8 (107-219)||(28345494-28345606)
chr8 (165-216)||(2075864-2075915)
chr8 (134-221)||(14186321-14186408)
chr8 (116-222)||(2183588-2183694)
chr8 (137-219)||(8545352-8545434)
chr8 (159-221)||(11255033-11255095)
chr8 (83-219)||(30481369-30481506)
chr8 (144-220)||(15173890-15173966)
[»] chr7 (62 HSPs)
chr7 (49-221)||(35074476-35074649)
chr7 (49-221)||(7780014-7780187)
chr7 (49-221)||(16866175-16866348)
chr7 (49-218)||(30650640-30650810)
chr7 (49-216)||(10072477-10072645)
chr7 (48-221)||(12980383-12980557)
chr7 (49-221)||(17885471-17885644)
chr7 (49-213)||(3226860-3227025)
chr7 (49-221)||(21702665-21702838)
chr7 (73-221)||(38139730-38139879)
chr7 (49-221)||(38152893-38153065)
chr7 (49-221)||(17851860-17852031)
chr7 (49-221)||(27850246-27850413)
chr7 (73-219)||(45380115-45380261)
chr7 (49-221)||(18125142-18125315)
chr7 (49-216)||(39317006-39317174)
chr7 (49-191)||(24753200-24753342)
chr7 (49-214)||(45885679-45885845)
chr7 (49-221)||(18825780-18825959)
chr7 (49-218)||(5377094-5377264)
chr7 (49-191)||(43507481-43507624)
chr7 (136-222)||(31426013-31426099)
chr7 (50-213)||(41103670-41103828)
chr7 (74-218)||(3920547-3920680)
chr7 (49-219)||(25905637-25905807)
chr7 (73-207)||(39455953-39456088)
chr7 (132-222)||(18683979-18684069)
chr7 (49-214)||(26004400-26004554)
chr7 (134-219)||(26622959-26623044)
chr7 (132-222)||(32546197-32546287)
chr7 (132-221)||(2630572-2630660)
chr7 (49-213)||(44734273-44734436)
chr7 (107-222)||(27063339-27063454)
chr7 (136-222)||(28309497-28309583)
chr7 (49-221)||(45708785-45708952)
chr7 (132-221)||(10995832-10995921)
chr7 (49-215)||(37218016-37218184)
chr7 (65-218)||(37579271-37579424)
chr7 (73-188)||(41741388-41741504)
chr7 (144-223)||(25979927-25980006)
chr7 (132-214)||(10990859-10990941)
chr7 (49-191)||(24425416-24425547)
chr7 (51-191)||(37182310-37182451)
chr7 (49-169)||(37195923-37196044)
chr7 (132-221)||(46127182-46127270)
chr7 (111-222)||(22973393-22973504)
chr7 (144-183)||(33841122-33841161)
chr7 (83-221)||(3157089-3157227)
chr7 (137-191)||(16079049-16079103)
chr7 (97-222)||(27063143-27063269)
chr7 (137-218)||(16811739-16811819)
chr7 (137-214)||(25782910-25782987)
chr7 (132-221)||(27896473-27896562)
chr7 (144-220)||(30839144-30839220)
chr7 (135-222)||(21750787-21750874)
chr7 (134-221)||(23475263-23475350)
chr7 (65-170)||(44658397-44658503)
chr7 (132-222)||(29157354-29157446)
chr7 (134-183)||(29292748-29292797)
chr7 (132-181)||(42908039-42908088)
chr7 (53-169)||(44985836-44985952)
chr7 (97-216)||(5565269-5565389)
[»] chr3 (46 HSPs)
chr3 (49-221)||(29284337-29284510)
chr3 (49-221)||(39655187-39655360)
chr3 (49-221)||(42758375-42758548)
chr3 (49-221)||(44252748-44252921)
chr3 (49-221)||(44953349-44953522)
chr3 (49-218)||(4557219-4557389)
chr3 (49-221)||(34025955-34026128)
chr3 (49-221)||(7469692-7469865)
chr3 (49-221)||(39728672-39728845)
chr3 (49-221)||(44639275-44639448)
chr3 (49-221)||(48390731-48390904)
chr3 (49-219)||(4015958-4016129)
chr3 (49-221)||(54317145-54317318)
chr3 (115-221)||(44172627-44172733)
chr3 (115-221)||(44179327-44179433)
chr3 (65-221)||(49580065-49580222)
chr3 (48-221)||(48305554-48305728)
chr3 (49-219)||(23546862-23547027)
chr3 (50-221)||(49025682-49025841)
chr3 (49-189)||(22535755-22535896)
chr3 (49-221)||(44106708-44106879)
chr3 (107-182)||(30616254-30616329)
chr3 (95-221)||(34154415-34154542)
chr3 (114-221)||(52198156-52198263)
chr3 (49-219)||(53631907-53632078)
chr3 (65-169)||(6738335-6738440)
chr3 (71-218)||(34119660-34119808)
chr3 (49-191)||(52572640-52572783)
chr3 (165-219)||(31126826-31126880)
chr3 (85-169)||(20087050-20087135)
chr3 (71-223)||(17146090-17146239)
chr3 (73-182)||(43582617-43582727)
chr3 (49-221)||(19111735-19111908)
chr3 (49-213)||(23153979-23154143)
chr3 (107-216)||(23580833-23580942)
chr3 (85-221)||(42243388-42243525)
chr3 (49-124)||(29858489-29858565)
chr3 (132-221)||(10043280-10043369)
chr3 (149-213)||(29842317-29842381)
chr3 (80-141)||(34593219-34593282)
chr3 (134-185)||(1337077-1337128)
chr3 (65-171)||(23910182-23910289)
chr3 (144-181)||(55438787-55438824)
chr3 (83-182)||(3385804-3385904)
chr3 (49-113)||(12369104-12369168)
chr3 (54-218)||(30904737-30904899)
[»] chr2 (38 HSPs)
chr2 (49-221)||(30846948-30847121)
chr2 (48-221)||(24414045-24414219)
chr2 (49-221)||(9632388-9632561)
chr2 (65-220)||(31942115-31942272)
chr2 (49-215)||(37106700-37106867)
chr2 (49-221)||(36128020-36128193)
chr2 (65-220)||(13830739-13830894)
chr2 (83-221)||(7314596-7314735)
chr2 (132-221)||(37999485-37999574)
chr2 (48-188)||(37472672-37472813)
chr2 (49-221)||(13705269-13705448)
chr2 (95-221)||(8915898-8916024)
chr2 (49-175)||(12341648-12341775)
chr2 (134-213)||(6027889-6027968)
chr2 (49-220)||(10208345-10208516)
chr2 (48-221)||(44746022-44746196)
chr2 (107-221)||(45256825-45256939)
chr2 (49-177)||(10920684-10920813)
chr2 (49-221)||(19104751-19104928)
chr2 (131-222)||(38342516-38342607)
chr2 (65-212)||(45115569-45115719)
chr2 (133-183)||(15546784-15546834)
chr2 (144-222)||(43371554-43371632)
chr2 (132-221)||(22900796-22900885)
chr2 (49-220)||(42797915-42798074)
chr2 (134-222)||(14331528-14331616)
chr2 (135-221)||(35248386-35248472)
chr2 (49-191)||(12193740-12193884)
chr2 (132-215)||(24051622-24051705)
chr2 (98-170)||(18106082-18106155)
chr2 (107-222)||(4427925-4428040)
chr2 (144-191)||(14540813-14540860)
chr2 (134-221)||(25210379-25210466)
chr2 (132-222)||(3547167-3547257)
chr2 (138-212)||(40734588-40734662)
chr2 (137-222)||(44057883-44057969)
chr2 (133-214)||(6164472-6164553)
chr2 (152-220)||(30696927-30696995)
[»] scaffold0036 (1 HSPs)
scaffold0036 (132-219)||(33396-33483)
[»] scaffold0022 (1 HSPs)
scaffold0022 (65-190)||(90629-90749)
[»] scaffold0005 (1 HSPs)
scaffold0005 (132-219)||(211367-211454)
[»] scaffold0014 (1 HSPs)
scaffold0014 (48-181)||(14097-14230)
[»] scaffold0008 (2 HSPs)
scaffold0008 (111-222)||(67749-67860)
scaffold0008 (111-222)||(75592-75703)
[»] scaffold0013 (1 HSPs)
scaffold0013 (132-222)||(105467-105557)
[»] scaffold0184 (1 HSPs)
scaffold0184 (132-222)||(2969-3059)
[»] scaffold0198 (1 HSPs)
scaffold0198 (137-221)||(20742-20826)
[»] scaffold0097 (1 HSPs)
scaffold0097 (131-190)||(33625-33685)
[»] scaffold0182 (1 HSPs)
scaffold0182 (149-220)||(16969-17040)
[»] scaffold0135 (1 HSPs)
scaffold0135 (134-221)||(36155-36242)
[»] scaffold0009 (1 HSPs)
scaffold0009 (73-212)||(107330-107469)
[»] scaffold0519 (1 HSPs)
scaffold0519 (159-221)||(10298-10360)
[»] scaffold0059 (1 HSPs)
scaffold0059 (132-222)||(70095-70185)


Alignment Details
Target: chr4 (Bit Score: 89; Significance: 5e-43; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 49 - 220
Target Start/End: Complemental strand, 11028253 - 11028081
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   |||| |||||||||||| ||||||| |||||||||||| || ||||| |||||||||||||||||   ||||||| ||| ||||    
T  11028253 catggcaacaaaacccatacacgtggttacccacccgaaccaaacccaatttgacgggttttctccgttttgactggatttgggtatgggtatgggtttt 11028154  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaacc 220  Q
    ||||||| | ||||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||||||||||    
T  11028153 ccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaactcatacccaaacc 11028081  T

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Target: chr4; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 221
Target Start/End: Complemental strand, 7609151 - 7608977
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattt 146  Q
    ||||||||||||||   |||| |||||||||||| ||||||  |||||||||||| || ||||||| |||||||||||||||   ||||||| ||| |||    
T  7609151 acatggcaacaaaacccatactcgtggttacccacccgaactaaacccaatttgacgggttttccccgttttgactggatttgggtatgggtatgggttt 7609052  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||| |  |||||||||||||||||||||||| |||||||| ||| ||| ||||||| |||||||||||||    
T  7609051 tccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 7608977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 48 - 221
Target Start/End: Original strand, 6481949 - 6482123
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattt 146  Q
    ||||||||||||||  |||||||||||||| ||| ||||| | ||| |||||||| |||||||| | ||||||| ||| |||   ||||||||||| |||    
T  6481949 acatggcaacaaaacctatacccgtggttatccacccgaatcaaactcaatttgacggattttctctgttttgattgggtttgggtatgggtttgggttt 6482048  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||| |||||||||||||||||||||||| ||||  |||||||| ||| ||| ||||||| |||||||||||||    
T  6482049 tccccaatttaaaaacacgggtatgggacgagtaaagggtatatatgtacccaccccgaacccatacccaaaccc 6482123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 55826538 - 55826711
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   |||||||||||||||| |||||||| || ||||||||| |||||||||| ||||||||||| |||  ||||| || ||| ||||    
T  55826538 catggcaacaaaacccatacccgtggttacccgtccgaaccaaatccaatttgacggattttccctgttttgactgggtttggatatgagtatgggtttt 55826637  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| |  |||||| ||||||||||||||||| |||||||| ||| ||| ||||||| |||| ||||||||    
T  55826638 ccccgatctcgaaacacaggtatgggacgggtaacgggtatataggtacccaccccgaacccatatccaaaccc 55826711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 221
Target Start/End: Complemental strand, 44317712 - 44317542
Alignment:
Q  52 ggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccc 150  Q
    ||||||||||   |||||||||||||| |  ||||| | |||||||||||| |||||||||| ||||||||||| |||   ||||||| ||| |||||||    
T  44317712 ggcaacaaaacccatacccgtggttactcgcccgaatcaaacccaatttgacggattttccccgttttgactgggtttgggtatgggtatgggttttccc 44317613  T
Q  151 cgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||| |  |||||||||||||||||||||||| |||||||| ||| ||| ||||||| |||||||||||||    
T  44317612 cgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 44317542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 26565011 - 26564838
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcc-cgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||| ||||||| || ||||||||| ||||||||  |||||||||||| |||   |||| |||||   |||    
T  26565011 catggcaacaaaacccatacccgtggttacccacccgaaccaaatccaatttgacggattttcttcgttttgactgggtttgggtatgagtttgagcttt 26564912  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||| ||||| ||||||||||||||||||| |||||||| ||| ||| ||||||  |||||||||||||    
T  26564911 ccccgatttcaaaacgcgggtatgggacgggtaacgggtatataggtacccaccccgaaaccatacccaaaccc 26564838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 43893407 - 43893235
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||  |||| || |||||||||||| || ||||||| ||||||||||| |||   ||||||| ||| |||     
T  43893407 catggcaacaaaacccatacccgtggttacccgcccgagccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttt- 43893309  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| |  |||||||||||||||||||||||| |||||||| ||||||| |||||| ||||||||||||||    
T  43893308 ccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtatccaccccgaattcatacccaaaccc 43893235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 5902535 - 5902702
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||  |||||||||||||||||  ||||||| ||| |||||||| || ||||||| ||||||||||| |||      |||| ||| ||||    
T  5902535 catggcaacaaaacctatacccgtggttacccgcccgaaccaaactcaatttgacgggttttccccgttttgactgggttt------gggtatgggtttt 5902628  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| |  |||||||||||||||||||||||| |||||||| ||| ||| ||||||| |||||||||||||    
T  5902629 ccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 5902702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 65 - 221
Target Start/End: Original strand, 6382203 - 6382360
Alignment:
Q  65 atacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaaca 163  Q
    ||||||||||||||||  ||||| | |||||||||||| || ||||||| | ||||||||| |||   ||||||| ||| ||||| ||||| | ||||||    
T  6382203 atacccgtggttacccgcccgaatcaaacccaatttgacgggttttccccgctttgactgggtttgggtatgggtatgggttttctccgatctcaaaaca 6382302  T
Q  164 cgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||||||||||||| |||||||| ||| ||| ||||||| |||||||||||||    
T  6382303 cgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 6382360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 11122784 - 11122957
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | ||||||||||||||||  ||||||| ||| |||||||| |||||||  ||||||||||||  |||   ||||||| ||| ||||    
T  11122784 catggcaacaaaactcatacccgtggttacccgcccgaaccaaactcaatttgacggattttttccgttttgactgagtttgggtatgggtatgggtttt 11122883  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    | ||||| |  |||||||||||||||||||||||| |||||||| ||| ||| ||||||| ||||| |||||||    
T  11122884 ctccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatactcaaaccc 11122957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 48459661 - 48459488
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||||  ||| ||| |||||||| |||||| | |||| |||||||||| |||| ||| |||||| |||||||   ||||| | ||| ||||    
T  48459661 catggcaacaaaatccatatccgcggttacccgtccgaatcaaaccaaatttgatgggtttttcccattttgattggatttgagtatggatatgggtttt 48459562  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||| |||||| |||||||| |||||||||||||||||| ||| ||| ||||||| |||||||| ||||    
T  48459561 ccccgatttcaaaacatgggtatggaacgggtaacaggtatataggtacccaccccgaacccatacccataccc 48459488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 21424041 - 21423868
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||| |||| | ||||||||||||||||  ||||||| || ||||||||| ||||||| |||||||||||||| |||   ||||||| ||| ||||    
T  21424041 catggcaataaaactcatacccgtggttacccgcccgaaccaaatccaatttgacggatttttcccgttttgactgggtttgggtatgggtatgggtttt 21423942  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||| || |  ||||||||||||| |||||||||| |||||||| ||| ||| ||| ||| ||||| |||||||    
T  21423941 ccccaatctcgaaacacgggtatgagacgggtaacgggtatataggtacccaccccaaacccatacacaaaccc 21423868  T

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Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 47550290 - 47550441
Alignment:
Q  71 gtggttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggta 169  Q
    ||||||||||  ||||||| ||| |||||||  ||||||||||  |||||||||| |||   ||| ||| ||  ||||||||||| | ||||||||||||    
T  47550290 gtggttacccgcccgaaccaaactcaatttggcggattttccccattttgactgggtttgggtataggtatgagttttccccgatctcaaaacacgggta 47550389  T
Q  170 tgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||||||||||||||||| ||| ||| ||||||| |||||||||||||    
T  47550390 tgggacgggtaacaggtatataggtacccaccccgaacccatacccaaaccc 47550441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 1724309 - 1724398
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||||||||| | |||||| ||| ||| ||||||| |||||||||||||    
T  1724309 tatgggtttgggttttccccgatttcaaaacatgggtatgggacgggtaacggttatataggtacccaccccgaacccatacccaaaccc 1724398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 221
Target Start/End: Original strand, 15987201 - 15987350
Alignment:
Q  73 ggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatg 171  Q
    ||||||||| ||||||| |||||||||||| || ||||| || |||||| ||| |||   ||||||| ||  ||||||| ||||| ||||||||||||||    
T  15987201 ggttacccacccgaaccaaacccaatttgacgggttttctccattttgattgggtttgggtatgggtatgagttttcccagattttaaaacacgggtatg 15987300  T
Q  172 ggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||| ||||||| ||||||||  || ||| ||||||| |||||||||||||    
T  15987301 ggatgggtaacgggtatatagatacccaccccgaacccatacccaaaccc 15987350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 31918473 - 31918646
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||| |||||||||||   ||||||| |||||||||||| || ||||||| ||||||||||| |||   |||| || ||| ||||    
T  31918473 catggcaacaaaacccatatccgtggttacctgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgagtatgggtttt 31918572  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| |  |||||||||||||||||| ||||  ||||||||  || ||| ||||||| |||||||||||||    
T  31918573 ccccgatctcgaaacacgggtatgggacgagtaatgggtatatagttacccaccccgaacccatacccaaaccc 31918646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 39047132 - 39046959
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||  |||| ||  |||||||| |||||| | ||||||||||||||| ||||| |||||||||||| ||||   ||||||| ||| ||||    
T  39047132 catggcaacaaaacctatatccacggttacccgtccgaatcaaacccaatttgatgggttttctccgttttgactgaatttgagtatgggtatgggtttt 39047033  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||| ||||  |||||||||||||||||  ||||| |||||||| ||| |||  || ||| |||||||| ||||    
T  39047032 ccccaatttccaaacacgggtatgggacatgtaacgggtatataggtacccactccaaacccatacccataccc 39046959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 42299944 - 42299799
Alignment:
Q  73 ggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatg 171  Q
    ||||||||||||||||| ||| |||||||| || ||||  ||| ||||||||  ||||  ||||||| ||||||||||||||||| ||||||| |||||     
T  42299944 ggttacccatccgaaccaaactcaatttgacgggttttttccggtttgactgagtttaggtatgggtatggattttccccgatttcaaaacac-ggtat- 42299847  T
Q  172 ggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    ||||||||||| |||||||| ||| ||| || |||| ||||| |||||    
T  42299846 ggacgggtaacgggtatataggtacccaccctgaacccatactcaaac 42299799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 32585663 - 32585496
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgtttt-gactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | ||||||| ||||| ||  || |||| ||||||||||||  | ||||||| |||| |||||| |||      |||| || |||||    
T  32585663 catggcaacaaaactcatacccgcggttatccgcccaaaccaaacccaatttgaccggttttcccctttttgactgggttt------gggtatgaatttt 32585570  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    | ||||||| |||||||||||||||||| |||||| |||||||| ||| ||| || |||| |||||||||||||    
T  32585569 ctccgatttcaaaacacgggtatgggacaggtaacgggtatataggtacccaccctgaacccatacccaaaccc 32585496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 219
Target Start/End: Original strand, 32596184 - 32596270
Alignment:
Q  133 atgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    ||||||| || ||||||||||||| ||||||||||||||||||||||||| |||||||| ||  ||| | | |||||||||||||||    
T  32596184 atgggttggggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtccccacctcaaactcatacccaaac 32596270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 221
Target Start/End: Complemental strand, 31752620 - 31752463
Alignment:
Q  65 atacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggattttccccgatttaaaaaca 163  Q
    ||||||| ||||||||  ||||| | || ||||||||| || ||||  ||||||||| ||| |||  |||||||| ||| ||||||||||||| ||||||    
T  31752620 atacccgcggttacccgcccgaatcaaatccaatttgacgggtttttaccgttttgattgggtttggatatgggtatgggttttccccgatttcaaaaca 31752521  T
Q  164 cgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||| |||| |||||  ||||||| ||  ||| ||||||| |||||||| ||||    
T  31752520 cgggtatgagacgagtaacgagtatataggttcccaccccgaacccatacccataccc 31752463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 37349292 - 37349171
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttga-tggattttcccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||  ||||||| ||||||||||||  || ||| |||||||||||||| |||   |||| |||||  ||||    
T  37349292 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacaggttttccccgttttgactgggtttgggtatgagtttgagtttt 37349193  T
Q  148 ccccgatttaaaaacacgggta 169  Q
    ||||||||| ||||||||||||    
T  37349192 ccccgatttcaaaacacgggta 37349171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 216
Target Start/End: Original strand, 47239368 - 47239468
Alignment:
Q  116 tttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcataccc 215  Q
    ||||| |||||||  |||||||| ||||||||  ||||||| ||||||||||||||||||||||||| |||||||| ||  ||| || |||| |||||||    
T  47239368 tttgattggatttggatatgggtatggattttttccgattttaaaacacgggtatgggacgggtaacgggtatataggttcccaccctgaacccataccc 47239467  T
Q  216 a 216  Q
    |    
T  47239468 a 47239468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 1724185 - 1724308
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttc 148  Q
    ||||| ||||||| | ||||||||| ||||||| ||||||| ||| |||||||| |  |||||||  ||||||||| |||   ||||||||||| ||||     
T  1724185 catggtaacaaaactcatacccgtgtttacccacccgaaccaaactcaatttgacgtgttttccccgtttgactgggtttgggtatgggtttgggttttt 1724284  T
Q  149 cccgatttaaaaacacgggtatgg 172  Q
    |||||||| |||||| ||||||||    
T  1724285 cccgatttcaaaacatgggtatgg 1724308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 12825465 - 12825548
Alignment:
Q  137 gtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaacc 220  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||| | |||||| ||| ||| || ||||  |||||||||||    
T  12825465 gtttgggttttccccgatttcaaaacacgggtatgggacgggtaacggatatatacgtacccaccctgaacctatacccaaacc 12825548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 14605924 - 14606011
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    ||||||||||| ||||| ||||||| |||| ||||||| | ||||||||||||| ||||| ||| ||| ||||||| |||||||||||    
T  14605924 tatgggtttgggttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccccgaacccatacccaaac 14606011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 29527905 - 29527818
Alignment:
Q  135 gggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    |||||||| ||||||||||||| |||| ||||||| | |||||||||| || ||||| ||| ||| ||||||| ||||||||||||||    
T  29527905 gggtttgggttttccccgatttcaaaatacgggtacgtgacgggtaacggggatatatgtacccaccccgaacccatacccaaaccct 29527818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 37107531 - 37107433
Alignment:
Q  107 ttttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaa 206  Q
    ||||||| |||||||||| ||| | |||| |||||| |||||||  |||| ||||||||||||||||||||||||| |||||||| ||| ||| ||||||    
T  37107531 ttttcccattttgactgggtttgtgtatgagtttgggttttccca-atttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaa 37107433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 47103855 - 47103744
Alignment:
Q  111 cccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactca 210  Q
    |||| ||||||||| ||| | ||||||||||| |||||||| |||| |||| ||||||| ||| ||||||||  | ||||| ||| ||| ||||||| ||    
T  47103855 cccgatttgactgggtttttgtatgggtttgggttttccccaatttcaaaatacgggtacggggcgggtaacgcggatatatgtacccaccccgaaccca 47103756  T
Q  211 tacccaaaccct 222  Q
    ||||||||||||    
T  47103755 tacccaaaccct 47103744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 19534539 - 19534462
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||| ||||||| ||||   ||||||||||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  19534539 ttttctccgattttaaaatctgggtatgggacgggtaacaggtatataggtacccacctcgaactcatacccaaaccc 19534462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 207
Target Start/End: Original strand, 19883005 - 19883130
Alignment:
Q  83 ccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaa 181  Q
    ||||||| |||||||||||| || |||| |||| ||||| ||| |||   |||| |||||| ||||||||||||| ||||||||| || |||| ||||||    
T  19883005 ccgaaccaaacccaatttgacgggtttttcccgctttgattgggtttgagtatgagtttgggttttccccgattttaaaacacggatacgggaagggtaa 19883104  T
Q  182 caggtatataagtatccaacccgaac 207  Q
    | || ||||| ||||||| |||||||    
T  19883105 cggggatataggtatccaccccgaac 19883130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 222
Target Start/End: Original strand, 10574420 - 10574508
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    |||||||| |||||||||||||| | || || |||| |||||||||||| || ||||| ||| ||  ||||||||||||||||||||||    
T  10574420 tgggtttgaattttccccgatttcataatacaggtacgggacgggtaacggggatatatgtacccgccccgaactcatacccaaaccct 10574508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 21544673 - 21544585
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    |||||||||||||| |||||||| |||| ||||||| ||||| |||||  || ||||| ||| ||| ||||||| ||||||||||||||    
T  21544673 tgggtttggatttttcccgatttcaaaatacgggtacgggacaggtaatggggatatatgtacccaccccgaacccatacccaaaccct 21544585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 39375436 - 39375285
Alignment:
Q  71 gtggttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggta 169  Q
    ||||||||||  ||||||| ||  |||||||| || |||| ||  |||||||||  |||  ||||| |||||| ||||||||||||| |||| |||||||    
T  39375436 gtggttacccgcccgaaccaaattcaatttgacgggtttttcctattttgactgagtttggatatgagtttggcttttccccgatttcaaaatacgggta 39375337  T
Q  170 tgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    | ||||||||||| ||||||||  |||||| ||| | | ||||| |||||||    
T  39375336 taggacgggtaacgggtatatagatatccaccccaatcacatactcaaaccc 39375285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 4741214 - 4741296
Alignment:
Q  131 atatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
    ||||| |||||  |||||| |||||| |||||| ||||||||||||| ||||||| ||||||||| ||| ||||||| |||||    
T  4741214 atatgagtttgagttttcctcgattttaaaacatgggtatgggacggataacagggatataagtacccaccccgaacccatac 4741296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 31782707 - 31782621
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaacc 220  Q
    ||||||||| ||||||||||||| |||| ||||||| || || |||||| || ||||| ||| ||| ||| ||||||||||||||||    
T  31782707 tgggtttgggttttccccgatttcaaaatacgggtacggtacaggtaacggggatatatgtacccaccccaaactcatacccaaacc 31782621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 45065333 - 45065255
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    |||||| |||||| |||| ||||||| |||||| |||||||| ||||| ||| ||| ||||||| ||||||||||||||    
T  45065333 ttttcctcgatttcaaaatacgggtacgggacgagtaacagggatatatgtacccatcccgaacgcatacccaaaccct 45065255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 33516079 - 33516160
Alignment:
Q  141 ggattttccccgatttaaaa-acacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||| ||||||||||| ||||||||| | || |||||||||| ||||||||| ||| |||||||  ||||||||||||    
T  33516079 ggattttctccgatttaaaaaacacgggtacgagatgggtaacagggatataagtacccaccccgaacctatacccaaaccc 33516160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 10302216 - 10302096
Alignment:
Q  97 atttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagta 195  Q
    ||||||||| ||||||| ||||||| ||| |||   ||||||||| | ||||||||||||| |||  ||||||||| |||||||||| ||  |||| |||    
T  10302216 atttgatgggttttccccgttttgattgggtttgggtatgggtttaggttttccccgatttcaaagtacgggtatgagacgggtaacggggttatatgta 10302117  T
Q  196 tccaacccgaactcataccca 216  Q
     ||| ||||||| ||||||||    
T  10302116 cccaccccgaacccataccca 10302096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 222
Target Start/End: Original strand, 30266331 - 30266419
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    ||||||||| ||||  ||||||| | || |||||||  ||||||||||| || ||||| ||||||| ||||||| ||||||||||||||    
T  30266331 tgggtttggtttttttccgatttcataatacgggtacaggacgggtaacggggatatatgtatccaccccgaacccatacccaaaccct 30266419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 30285857 - 30285769
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    ||||||||| ||||  ||||||| | || |||||||  ||||||||||| || ||||| ||||||| ||||||| ||||||||||||||    
T  30285857 tgggtttggtttttttccgatttcataatacgggtacaggacgggtaacggggatatatgtatccaccccgaacccatacccaaaccct 30285769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 222
Target Start/End: Original strand, 31415909 - 31416020
Alignment:
Q  111 cccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactca 210  Q
    |||| ||||||||| ||||  |||  |||||||||||| ||||||| |||| ||||||| |||| || ||||||| ||||| ||| ||| ||||||| ||    
T  31415909 cccgatttgactgggtttaggtataagtttggattttctccgatttcaaaatacgggtacgggatggataacagggatatatgtacccaccccgaaccca 31416008  T
Q  211 tacccaaaccct 222  Q
     || ||||||||    
T  31416009 cactcaaaccct 31416020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 25941229 - 25941147
Alignment:
Q  137 gtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    |||||| |||| |||||||| |||||||||||| ||||| |||||| || | ||| ||| ||| ||||||| |||||||||||    
T  25941229 gtttgggtttttcccgatttcaaaacacgggtacgggacaggtaacgggaagataggtacccaccccgaacccatacccaaac 25941147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 43309579 - 43309529
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaac 182  Q
    |||| |||||| |||| |||||||| |||||||||||||||||||||||||    
T  43309579 tatgagtttgggtttttcccgatttcaaaacacgggtatgggacgggtaac 43309529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 8843788 - 8843892
Alignment:
Q  116 tttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcataccc 215  Q
    ||||||||| |||  ||||| ||||| ||||| |||||||| ||||||| |||  |||||||||| | || |||||  || ||| |||||||||||||||    
T  8843788 tttgactgggtttggatatgtgtttgaatttttcccgattttaaaacacaggtgcgggacgggtagcggggatatagataccca-cccgaactcataccc 8843886  T
Q  216 aaaccc 221  Q
    ||||||    
T  8843887 aaaccc 8843892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 8856752 - 8856856
Alignment:
Q  116 tttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcataccc 215  Q
    ||||||||| |||  ||||| ||||| ||||| |||||||| ||||||| |||  |||||||||| | || |||||  || ||| |||||||||||||||    
T  8856752 tttgactgggtttggatatgtgtttgaatttttcccgattttaaaacacaggtgcgggacgggtagcggggatatagataccca-cccgaactcataccc 8856850  T
Q  216 aaaccc 221  Q
    ||||||    
T  8856851 aaaccc 8856856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 19548852 - 19548985
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggatttt 147  Q
    ||||| |||||||| | |||||  ||| |||| | ||||||| |||||||||||| || ||| |||  ||||||||| |||   ||||| |  || ||||    
T  19548852 acatgacaacaaaactcatacctatgggtacctacccgaaccaaacccaatttgacggttttcccctctttgactgggtttgggtatggataagggtttt 19548951  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaa 181  Q
    ||||||||| ||||||| |||| |||||||||||    
T  19548952 ccccgatttcaaaacacaggtacgggacgggtaa 19548985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 188
Target Start/End: Original strand, 7985076 - 7985180
Alignment:
Q  85 gaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaaca 183  Q
    ||||| |||||||||||| || |||||| | |||||| ||| |||   |||  |||||||||||| ||||||| |||||| ||||||||||||| |||||    
T  7985076 gaaccaaacccaatttgacgggttttcctggttttgattgggtttgggtataagtttggattttctccgatttcaaaacatgggtatgggacggataaca 7985175  T
Q  184 ggtat 188  Q
     ||||    
T  7985176 tgtat 7985180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 36306875 - 36306807
Alignment:
Q  138 tttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaa 206  Q
    ||||||||||| ||||||| |||||||||||||| ||||| |||| || ||||| ||| | ||||||||    
T  36306875 tttggattttctccgatttcaaaacacgggtatgagacggttaacggggatataggtacctaacccgaa 36306807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 425942 - 425867
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgttttgactgg 124  Q
    |||| |||||||| | |||| |||||||| || |||||||| |||| ||||||  || ||||||||||||||||||    
T  425942 catgacaacaaaactcatactcgtggttatccgtccgaacctaacctaatttgggggtttttcccgttttgactgg 425867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 7334171 - 7334230
Alignment:
Q  107 ttttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgg 166  Q
    |||||||| ||||||||| |||   ||||| ||||||||||||||||||| |||||||||    
T  7334171 ttttcccgctttgactgggtttgggtatggatttggattttccccgatttcaaaacacgg 7334230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 9230376 - 9230289
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||| |||| ||| | || | ||||||||||| |||||| ||||  ||||||| ||||||| ||| |||||||| ||||||||    
T  9230376 tgggtttgggtttttcccaaatttataacacgggtataggacggataacgagtatataggtatccatcccaaactcataaccaaaccc 9230289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 25298834 - 25298921
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||| |||| || ||||| |||||||||||| |||| ||||||  || |||||  | |||| ||||||| |||||||||||||    
T  25298834 tgggtttgggtttttccggatttcaaaacacgggtacgggatgggtaatggggatatagctgtccaccccgaacccatacccaaaccc 25298921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 35304495 - 35304602
Alignment:
Q  112 ccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcat 211  Q
    ||||||||| |||||||  |||||||||||| ||||| |  |||| ||||||   ||| |||||||||||| || ||||| ||| | | ||| |||||||    
T  35304495 ccgttttgattggatttggatatgggtttgggttttctctaattttaaaacataagtacgggacgggtaacggggatataggtacctaccccaaactcat 35304594  T
Q  212 acccaaac 219  Q
    ||||||||    
T  35304595 acccaaac 35304602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 3737870 - 3737789
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaac-aggtatataagtatccaacccgaactcataccc 215  Q
    |||||| || |||| ||| |||| ||||||||||||||||||||||||| |||| |||| ||| ||| ||||||| |||||||    
T  3737870 tgggttagggtttttcccaatttcaaaacacgggtatgggacgggtaacgaggt-tatatgtacccatcccgaacccataccc 3737789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 3e-41; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 2367500 - 2367327
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||| |||||||||||| |||||||| ||||||||||||||| |||| |||||||||||| | |||   ||||||| ||| ||||    
T  2367500 catggcaacaaaacccatatccgtggttacccgtccgaaccaaacccaatttgatgggtttttcccgttttgactaggtttgggtatgggtatgggtttt 2367401  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||||| ||| ||||||| |||||||||||||    
T  2367400 ccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaaccc 2367327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 221
Target Start/End: Complemental strand, 32854019 - 32853845
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggattt 146  Q
    ||||||||||||||   ||||||||||||| ||  ||||||| |||||||||||| || ||||| ||||||||||||| |||   ||||||| ||| |||    
T  32854019 acatggcaacaaaacccatacccgtggttatccgaccgaaccaaacccaatttgacgggttttctccgttttgactgggtttggttatgggtatgggttt 32853920  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||| | ||||||||||||||||||||||||| |||||||| ||| ||| ||||||| |||||||||||||    
T  32853919 tccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 32853845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 221
Target Start/End: Original strand, 5863298 - 5863470
Alignment:
Q  50 atggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttc 148  Q
    ||||||||||||   |||||||||||||||   ||||||| |||||||||||| || ||||||| ||||||||||| |||   ||||||| ||| |||||    
T  5863298 atggcaacaaaacccatacccgtggttacctgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttttc 5863397  T
Q  149 cccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||| ||||||||||||||||||||||||| ||||||||  || ||| | ||||| |||||||||||||    
T  5863398 cccgatttcaaaacacgggtatgggacgggtaacgggtatatagatacccacctcgaacccatacccaaaccc 5863470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 27738900 - 27738773
Alignment:
Q  95 caatttgatggatttt-cccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataag 193  Q
    ||||||||||| |||| |||||||||||||| ||||  ||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| |||||| |    
T  27738900 caatttgatgggtttttcccgttttgactgggtttaggtatgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacagatatatatg 27738801  T
Q  194 tatccaacccgaactcatacccaaaccc 221  Q
    || ||| ||||||| |||||||||||||    
T  27738800 tacccaccccgaacccatacccaaaccc 27738773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 3483837 - 3484010
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   |||| | |||||||||  ||||||| |||||||||||| || ||||||| ||||||||||| |||   |||| || ||| ||||    
T  3483837 catggcaacaaaacccatactcatggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgtgtatgggtttt 3483936  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| |  |||||||||||||||| ||||||| |||||||| ||| ||| ||||||| |||||||||||||    
T  3483937 ccccgatctcgaaacacgggtatgggatgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 3484010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 27534858 - 27534685
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||| || |||||||| ||| |||||||| || ||||||| ||||||| ||| |||   ||||||| ||  ||||    
T  27534858 catggcaacaaaacccatacccgtggttaaccgtccgaaccaaactcaatttgacgggttttccccgttttgattgggtttgggtatgggtatgagtttt 27534759  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| |  |||||||||||||||||||||||| |||||||| ||| ||| ||||||  |||||||||||||    
T  27534758 ccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaatccatacccaaaccc 27534685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 180
Target Start/End: Original strand, 10187994 - 10188126
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||  ||||||| |||||||||||| || ||||||| ||||||||||| |||   ||||||| ||| ||||    
T  10187994 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggtttt 10188093  T
Q  148 ccccgatttaaaaacacgggtatgggacgggta 180  Q
    ||||||| | |||||||||||||||||||||||    
T  10188094 ccccgatctcaaaacacgggtatgggacgggta 10188126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 192
Target Start/End: Complemental strand, 30986427 - 30986283
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||  ||||||| ||| |||||||| || ||||||| ||||||||||  |||   ||||||| ||| ||||    
T  30986427 catggcaacaaaacccatacccgtggttacccgcccgaaccaaactcaatttgacgggttttccccgttttgactgagtttgggtatgggtatgggtttt 30986328  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataa 192  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||    
T  30986327 ccccgatctcaaaacacgggtatgggacgggtaacgggtatataa 30986283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 20349154 - 20349068
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| ||||| || ||||| ||| ||| ||||||||||||||||||    
T  20349154 tatgagtttggattttccccgatttcaaaacacgggtatgggacgagtaacggggatataggtacccaccccgaactcatacccaaa 20349068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 10142467 - 10142604
Alignment:
Q  84 cgaaccgaacccaatttgatggattttcc-cgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaac 182  Q
    |||||| ||| |||||||  || |||||| |||||||||||| |||   ||||||| ||| ||||||||||| | |||| ||||||||||||| ||||||    
T  10142467 cgaaccaaactcaatttggcgggttttcctcgttttgactgggtttgggtatgggtatgggttttccccgatctcaaaaaacgggtatgggacaggtaac 10142566  T
Q  183 aggtatataagtatccaacccgaactcatacccaaacc 220  Q
     |||||||| ||| ||| ||||||||||||||||||||    
T  10142567 gggtatataggtacccaccccgaactcatacccaaacc 10142604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 29199885 - 29199970
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||||||||||| ||||| ||||| | ||||||| |||||||||||    
T  29199885 tgggtttggattttccccgatttcaaaatacgggtacgggacgggtaacagggatatatgtatctaccccgaacccatacccaaac 29199970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 221
Target Start/End: Complemental strand, 30816401 - 30816261
Alignment:
Q  80 catccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacggg 178  Q
    |||||||||| |||||||||||||||||||| |||||||||| ||| |||  |||||||||||  ||||||||  |||  |||||||||||||||| |||    
T  30816401 catccgaaccaaacccaatttgatggattttccccgttttgattgggtttggatatgggtttgagttttccccatttt--aaacacgggtatgggatggg 30816304  T
Q  179 taacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||  |||||||| | | ||| ||||||| |||| ||||||||    
T  30816303 taatgggtatataggaacccaccccgaacccatatccaaaccc 30816261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 12141559 - 12141386
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   |||||  |||||||||  ||||||| ||  |||||||| || ||||||| ||||||||||| |||   || |||| ||| ||||    
T  12141559 catggcaacaaaacccatacctatggttacccgcccgaaccaaattcaatttgacgggttttccccgttttgactgggtttgggtacgggtatgggtttt 12141460  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||| || | ||||||||| |||||||||||| || |||||||| ||| ||| ||||||| |||||||||||||    
T  12141459 ccccaatctcaaaacacggatatgggacgggtgacgggtatataggtacccaccccgaacccatacccaaaccc 12141386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 14410865 - 14410942
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||||| ||| ||| ||||||| |||||||||||||    
T  14410865 ttttcccagatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 14410942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 24225788 - 24225699
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| ||||||||||||||| | ||||||||| ||||||||||||||| |||||||| ||| ||| ||||||| ||| |||||||||    
T  24225788 tatgggtatggattttccccgatctcaaaacacggatatgggacgggtaacgggtatataggtacccaccccgaacccatgcccaaaccc 24225699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 221
Target Start/End: Complemental strand, 11762574 - 11762446
Alignment:
Q  94 ccaatttgatggattttcccg-ttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataa 192  Q
    ||||||||| || |||||||  |||| ||||| |||  |||||| ||| | |||| ||||||||  ||||| |||||||||||||||||| ||||||||     
T  11762574 ccaatttgacgggttttccccatttttactgggtttggatatggatttaggtttttcccgatttctaaacaagggtatgggacgggtaacgggtatatag 11762475  T
Q  193 gtatccaacccgaactcatacccaaaccc 221  Q
    || |||| |||||||||||||||||||||    
T  11762474 gtgtccaccccgaactcatacccaaaccc 11762446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 24602856 - 24602943
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||| ||||||| ||||| |||||| ||||||| |||||||||||||||||||  || ||| ||||||| |||||||||||||    
T  24602856 tgggtttgggttttcccagatttcaaaacatgggtatgtgacgggtaacaggtatatagatacccaccccgaacccatacccaaaccc 24602943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 18908983 - 18908893
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    |||| |||||| ||||||||||||| |||| |||| |||||||||||||||| | ||||| ||| ||| ||| ||||||||||||||||||    
T  18908983 tatgagtttgggttttccccgatttcaaaatacggatatgggacgggtaacaaggatatatgtacccaccccaaactcatacccaaaccct 18908893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 28079694 - 28079780
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    ||||||||||| ||||||||||||| |||||| ||||| |||||||||||| || ||||| ||| ||| ||||||| ||||||||||    
T  28079694 tatgggtttgggttttccccgatttcaaaacatgggtacgggacgggtaacggggatataggtacccaccccgaacccatacccaaa 28079780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 12309662 - 12309573
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| ||| | ||||| ||||| ||||||||||||||| |||||||||||||||||| ||| ||| |||||||  ||||||||||||    
T  12309662 tatgggtatgggtattccctgatttcaaaacacgggtatggaacgggtaacaggtatatatgtacccaccccgaaccgatacccaaaccc 12309573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 32053214 - 32053089
Alignment:
Q  91 aacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtata 189  Q
    |||||||||||| || ||||||| ||||||||||| |||      |||| ||| ||||||||||||| |||||| || ||||||||||||||| ||||||    
T  32053214 aacccaatttgacgggttttccccgttttgactgggttt------gggtatgggttttccccgatttcaaaacatggatatgggacgggtaacgggtata 32053121  T
Q  190 taagtatccaacccgaactcatacccaaaccc 221  Q
    || ||| ||| ||| ||| |||||||||||||    
T  32053120 tatgtacccaccccaaacccatacccaaaccc 32053089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 14506174 - 14506095
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||||| |||| || ||| ||| ||||||| |||||    
T  14506174 tgggtttgggttttccccgatttcaaaacacaggtatgggacgggtaacaagtatttaggtacccaccccgaacccatac 14506095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 20610955 - 20611054
Alignment:
Q  107 ttttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaa 206  Q
    |||||||| ||| ||||| ||||  |||||||||||  |||||||||||| |||| ||||||| |||||||||||| || ||||| ||||||| ||||||    
T  20610955 ttttcccgatttaactgggtttaggtatgggtttggggtttccccgatttcaaaatacgggtaggggacgggtaacgggaatatatgtatccaccccgaa 20611054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 31496608 - 31496465
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   |||||||||||||||| ||| |||| ||| |||||||| || |||| |||||||||||||| |||   ||||||| ||  ||||    
T  31496608 catggcaacaaaacccatacccgtggttacccgtccaaaccaaactcaatttgacgggttttccccgttttgactgggtttgggtatgggtatgagtttt 31496509  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatata 191  Q
    ||||||| |  ||||| ||||||||||||||  || ||||||||    
T  31496508 ccccgatctcgaaacatgggtatgggacgggggacgggtatata 31496465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 31501994 - 31501851
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   |||||||||||||||| ||| |||| ||| |||||||| || |||| |||||||||||||| |||   ||||||| ||  ||||    
T  31501994 catggcaacaaaacccatacccgtggttacccgtccaaaccaaactcaatttgacgggttttccccgttttgactgggtttgggtatgggtatgagtttt 31501895  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatata 191  Q
    ||||||| |  ||||| ||||||||||||||  || ||||||||    
T  31501894 ccccgatctcgaaacatgggtatgggacgggggacgggtatata 31501851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10551479 - 10551525
Alignment:
Q  1 tgtaaataattgcatatcaaacttatcctatagaacttattactggt 47  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  10551479 tgtaaataattgcatatcaaacttatccaatagaacttattactggt 10551525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 7393887 - 7393972
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    ||||||||||||||||||||||| |||||||| ||| | ||||| |||  |||||||| ||||||| ||||||| ||||| |||||    
T  7393887 tgggtttggattttccccgatttcaaaacacgagtaagagacggataatgggtatataggtatccaccccgaacccatactcaaac 7393972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 12678072 - 12678181
Alignment:
Q  112 ccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcat 211  Q
    ||||||||||||| |||   |||| |||||  ||||||||||||| || |||| ||||||||||||||||  |||||||| ||| ||| || |||| |||    
T  12678072 ccgttttgactgggtttgggtatgagtttgcgttttccccgatttcaagacacaggtatgggacgggtaaagggtatataggtacccaccctgaacccat 12678171  T
Q  212 acccaaaccc 221  Q
    ||||||||||    
T  12678172 acccaaaccc 12678181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 32532618 - 32532549
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||||| ||| ||| ||||||| |||||    
T  32532618 ttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataggtacccaccccgaacccatac 32532549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 9458969 - 9458861
Alignment:
Q  111 cccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactca 210  Q
    |||| ||||||||| |||   ||||||| ||| ||||||||||||||| || ||||||| |||| ||||||| || ||||| ||| ||| |||||||| |    
T  9458969 cccgatttgactgggtttgggtatgggtctgggttttccccgatttaataatacgggtacgggatgggtaacgggaatatatgtacccaccccgaactta 9458870  T
Q  211 tacccaaac 219  Q
    |||||||||    
T  9458869 tacccaaac 9458861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 189
Target Start/End: Complemental strand, 9442569 - 9442463
Alignment:
Q  83 ccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaa 181  Q
    ||||||| ||| |||||||| || ||||||| ||||||||||| |||   ||||||| |||  ||| |||||||| ||||||||||||||||||||||||    
T  9442569 ccgaaccaaactcaatttgacgggttttccccgttttgactgg-tttgggtatgggtatgggattttcccgatttcaaaacacgggtatgggacgggtaa 9442471  T
Q  182 caggtata 189  Q
    | ||||||    
T  9442470 cgggtata 9442463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 15498456 - 15498325
Alignment:
Q  91 aacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtata 189  Q
    |||||||||| | || ||||| ||||||||| ||| |||   ||||| | ||| ||||||||||||| |||||||||||||| ||| |||||  ||||||    
T  15498456 aacccaatttaacgggttttctccgttttgaatgggtttgggtatggatatgggttttccccgatttcaaaacacgggtatgagacaggtaatgggtata 15498357  T
Q  190 taagtatccaacccgaactcatacccaaaccc 221  Q
    || ||| ||| ||||||| || ||||||||||    
T  15498356 taggtacccatcccgaacccacacccaaaccc 15498325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 5108862 - 5109016
Alignment:
Q  66 tacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacac 164  Q
    |||||| || |||| ||||||||| | ||| |||||| |||| ||||| | ||| ||||| |||   ||||||||||  |||| |||||||| ||||||     
T  5108862 tacccgcgggtacctatccgaacccaccccgatttgagggatattcccagcttttactgggtttcggtatgggtttgagtttttcccgatttcaaaacat 5108961  T
Q  165 gggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    | |||||||| |  | ||||| ||||||||| ||| |||||||||||||||||||    
T  5108962 gtgtatgggatgaatgacagggatataagtacccaccccgaactcatacccaaac 5109016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 13769178 - 13769073
Alignment:
Q  116 tttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcataccc 215  Q
    ||||||||| ||||  ||||||||| | |||||||||| || |||||| |||||||||||||||||| |  ||||| ||| ||| || |||| |||| ||    
T  13769178 tttgactgggtttaggtatgggtttcggttttccccgacttcaaaacatgggtatgggacgggtaacggacatataggtacccacccagaacccatatcc 13769079  T
Q  216 aaaccc 221  Q
    ||||||    
T  13769078 aaaccc 13769073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 19367100 - 19367048
Alignment:
Q  131 atatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaaca 183  Q
    |||||||| |||||||||||| |||| |||||||||||||| |||||||||||    
T  19367100 atatgggtatggattttccccaattttaaaacacgggtatgagacgggtaaca 19367048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 32959948 - 32959868
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacc 214  Q
    ||||||||| |||||||  |||| |||||||||||| || ||||||||| || ||||| ||||||| ||||||| ||||||    
T  32959948 tgggtttgggttttccctaatttcaaaacacgggtacggaacgggtaacggggatataggtatccaccccgaacccatacc 32959868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 29341384 - 29341257
Alignment:
Q  95 caatttgatggattttc-ccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataag 193  Q
    ||||||||||  ||||| ||||||||| ||| |||  ||||| |||||| |||| ||||||||  ||||| ||| ||| |||||||||| |  ||||| |    
T  29341384 caatttgatgagttttctccgttttgattgggtttggatatgagtttgggtttttcccgattttcaaacatgggcatgagacgggtaacggagatatagg 29341285  T
Q  194 tatccaacccgaactcatacccaaaccc 221  Q
    || ||| ||| |||||||||||||||||    
T  29341284 tacccatcccaaactcatacccaaaccc 29341257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 8320797 - 8320882
Alignment:
Q  136 ggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| |||||||| |||| |||||||||||| || || ||||||||| |||||  |||| | ||||||| |||||||| ||||    
T  8320797 ggtttgggttttccccaatttcaaaacacgggtacggaacaggtaacagggatatagatatcgaccccgaacccatacccagaccc 8320882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 14034664 - 14034588
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactgg 124  Q
    |||||||||||||   ||| ||||||||||||| ||||||  |||||| |||||||| |||| ||||||||||||||    
T  14034664 catggcaacaaaacccataaccgtggttacccacccgaactaaacccattttgatgggttttacccgttttgactgg 14034588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 182
Target Start/End: Complemental strand, 14255125 - 14254998
Alignment:
Q  55 aacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcc-cgttttgactggatttatatatgggtttggattttccccga 153  Q
    ||||||||  |||| ||||||||||||  |||| | |||||| |||||  |||||||| |||||||||||| |||   ||||||||||  ||||| | ||    
T  14255125 aacaaaatccatactcgtggttacccactcgaatcaaacccattttgacagattttcctcgttttgactgggtttgggtatgggtttgagttttctctga 14255026  T
Q  154 tttaaaaacacgggtatgggacgggtaac 182  Q
    ||| ||| ||||||||||||||| |||||    
T  14255025 tttcaaa-cacgggtatgggacgtgtaac 14254998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 220
Target Start/End: Complemental strand, 9402672 - 9402591
Alignment:
Q  138 tttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaacc 220  Q
    ||||| ||||||||||||| |||||| |||||  |||||||||||| | ||||| || ||| |||||||| ||||| ||||||    
T  9402672 tttgggttttccccgatttcaaaacatgggtacaggacgggtaacatggatataggtgtcc-acccgaacccatactcaaacc 9402591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 9402716 - 9402670
Alignment:
Q  83 ccgaaccgaacccaatttgatggatttt-cccgttttgactggattt 128  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||||    
T  9402716 ccgaaccaaacccaatttgatggattttccccgctttgactggattt 9402670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 256502 - 256579
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||||||| |||||| ||||| | |||||||||  || ||||| ||| ||| ||| ||| |||||||||||||    
T  256502 ttttccccgatttcaaaacatgggtacgagacgggtaatgggcatataggtacccaccccaaacccatacccaaaccc 256579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 14410802 - 14410855
Alignment:
Q  69 ccgtggttacccatccgaaccgaacccaatttgatggattttcccgttttgact 122  Q
    |||||||||||| ||| |||| || | ||||||| |||||||||||||||||||    
T  14410802 ccgtggttacccgtccaaaccaaatctaatttgacggattttcccgttttgact 14410855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 3e-41; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 4921000 - 4920827
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||  ||||||| |||||||||||| || ||||| ||||||||||||| |||   ||||||| ||| ||||    
T  4921000 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttctccgttttgactgggtttggttatgggtatgggtttt 4920901  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| | ||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||||||||||    
T  4920900 ccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtatccaccccgaacccatacccaaaccc 4920827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 49 - 208
Target Start/End: Original strand, 33727916 - 33728076
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||  ||||||| |||||||||||| |||||||||| ||||||| ||| |||  |||||||| ||||||||    
T  33727916 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacggattttccccgttttgattgggtttggatatgggtatggatttt 33728015  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaact 208  Q
    ||||||| | ||||||||||||||||||||||||| |||||||| ||| ||| ||| ||||    
T  33728016 ccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccaaact 33728076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 4583293 - 4583120
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | ||| ||  ||||||||  ||||||| |||||||||||| || ||||||| ||||||| ||| |||  |||||||| ||| ||||    
T  4583293 catggcaacaaaactcatatccacggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgattgggtttggatatgggtatgggtttt 4583194  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||  ||| ||| ||| |||||||| ||||    
T  4583193 ccccgatttcaaaacacgggtatgggacgggtaacgggtatataggttcccaccccaaacccatacccataccc 4583120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 221
Target Start/End: Complemental strand, 30996745 - 30996597
Alignment:
Q  73 ggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgg 172  Q
    ||||| || |||||||| |||||||||||| ||||||||||||||||||||| |||   |||| || ||| ||||| ||||||| |||||||| ||||||    
T  30996745 ggttatccgtccgaaccaaacccaatttgacggattttcccgttttgactgggtttgggtatgagtatgggttttctccgattttaaaacacgagtatgg 30996646  T
Q  173 gacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||| |||||| |||||||| ||| ||| ||||||| || ||||||||||    
T  30996645 gacaggtaacgggtatataggtacccaccccgaacacacacccaaaccc 30996597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 20973411 - 20973581
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||| ||||||||  ||||||| |||||| | ||| || ||||||| ||||||||||| |||   ||||||| ||| ||||    
T  20973411 catggcaacaaaacccatacccgcggttacccgcccgaaccaaacccattctgacgggttttccccgttttgactgggtttggttatgggtatgggtttt 20973510  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    |||||||||  |||||||||||||||| ||||||| |||||||| ||| ||| ||||||| ||||||||||    
T  20973511 ccccgattttcaaacacgggtatgggatgggtaacgggtatataggtacccaccccgaacccatacccaaa 20973581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 18207192 - 18207020
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatg-gattttcccgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | ||||||||||||||||| || |||| |||||||||||| | | |||||||||||||||||| |||    ||| |||||| ||||    
T  18207192 catggcaacaaaactcatacccgtggttacccacccaaaccaaacccaatttgacgtgtttttcccgttttgactgggtttgggcatgagtttgggtttt 18207093  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    || |||||| ||||| || ||||||||| ||||||||||||||| ||| || |||||||| ||||  |||||||    
T  18207092 cctcgatttcaaaactcgtgtatgggacaggtaacaggtatataggta-cccacccgaacccatattcaaaccc 18207020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 221
Target Start/End: Original strand, 22694816 - 22694989
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatgga-ttttcccgttttgactggatttatatatgggtttggattt 146  Q
    ||||||||||||||   ||||||||||||||||  ||||||| |||||||||||| ||| |||||||||||| ||||| |||   ||||||| ||| |||    
T  22694816 acatggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacggaattttcccgttttaactgggtttgggtatgggtatgggttt 22694915  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
     ||||||| | |||| ||||||||||||||  |||| |||||| | ||| ||| ||||||| |||||||||||||    
T  22694916 -ccccgatctcaaaatacgggtatgggacgactaacgggtatagaggtacccaccccgaacccatacccaaaccc 22694989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 5908603 - 5908776
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||||  ||||||||||||| ||  ||||||| |||||||||||| || |||||||  |||||| ||| |||   ||||||| ||  ||||    
T  5908603 catggcaacaaaatccatacccgtggttatccgcccgaaccaaacccaatttgacgggttttccccattttgattgggtttgggtatgggtatgagtttt 5908702  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| |  |||||||||||||||||||||||| |||||||| |||  || ||| ||| |||||||||||||    
T  5908703 ccccgatctcgaaacacgggtatgggacgggtaacgggtatatatgtacacaccccaaacccatacccaaaccc 5908776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 40517980 - 40517807
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||  | ||||| ||  |||||||| ||||||| |||||||||||||| |||   ||||||| ||| ||||    
T  40517980 catggcaacaaaacccatacccgtggttacccgcctgaaccaaattcaatttgacggatttttcccgttttgactgggtttgggtatgggtatgggtttt 40517881  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||   ||||||||||||||||| ||||||| ||||||||  || ||| ||||||| ||||| |||||||    
T  40517880 ccccgatcccaaaacacgggtatgggatgggtaacgggtatatagttacccaccccgaacccatactcaaaccc 40517807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 12866488 - 12866639
Alignment:
Q  71 gtggttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggta 169  Q
    |||||||||| |||||||| || ||||||||| || |||||||  |||||||||| |||   ||||||| ||  ||||| ||||||| |||||| |||||    
T  12866488 gtggttacccgtccgaaccaaatccaatttgacgggttttccccattttgactgggtttgggtatgggtatgagttttctccgatttcaaaacatgggta 12866587  T
Q  170 tgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||||||||||||||||| ||| ||| | ||||| |||||||| ||||    
T  12866588 tgggacgggtaacaggtatataggtacccaccgcgaacccatacccataccc 12866639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 180
Target Start/End: Complemental strand, 10127248 - 10127116
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||| |||||||||  ||||||||||||| ||  ||||||| || ||||||||| || ||||||| ||||||||||| |||   ||||||| ||| ||||    
T  10127248 catgacaacaaaatccatacccgtggttatccgcccgaaccaaatccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggtttt 10127149  T
Q  148 ccccgatttaaaaacacgggtatgggacgggta 180  Q
    ||||||| | |||||||||||||||||||||||    
T  10127148 ccccgatctcaaaacacgggtatgggacgggta 10127116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 12834511 - 12834662
Alignment:
Q  71 gtggttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggta 169  Q
    |||||||||| |||||||| ||| |||||||| || |||||||  |||||||||| |||   ||||||| ||| ||||| || |||| |||||| || ||    
T  12834511 gtggttacccgtccgaaccaaactcaatttgacgggttttccccattttgactgggtttgggtatgggtatgggttttctccaatttcaaaacatggata 12834610  T
Q  170 tgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||||||||||||||||| ||| | | ||||||| |||||||| ||||    
T  12834611 tgggacgggtaacaggtatataggtacctaccccgaacccatacccataccc 12834662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 42987453 - 42987567
Alignment:
Q  107 ttttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaa 206  Q
    |||||||||||||||||  |||   || |||| ||||||||||||||| | ||||||||||||||||||| ||||| | |||||| ||| ||| ||||||    
T  42987453 ttttcccgttttgactgagtttgggtacgggtatggattttccccgatctcaaaacacgggtatgggacgtgtaacggatatataggtacccatcccgaa 42987552  T
Q  207 ctcatacccaaaccc 221  Q
    | |||||||||||||    
T  42987553 cccatacccaaaccc 42987567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 73 - 221
Target Start/End: Complemental strand, 15890356 - 15890208
Alignment:
Q  73 ggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatg 171  Q
    ||||||||  ||||||| || ||||||||| || |||| |||||||||||| | |||   |||| || ||| ||||| ||||||| ||||||||||||||    
T  15890356 ggttacccgcccgaaccaaatccaatttgacgggtttttcccgttttgactaggtttggctatgtgtatgggttttctccgatttcaaaacacgggtatg 15890257  T
Q  172 ggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||||| |||||||| ||| || |||||||| |||||||| ||||    
T  15890256 ggacgggtaacgggtatataggta-cccacccgaacccatacccataccc 15890208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 221
Target Start/End: Original strand, 29245865 - 29246039
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattt 146  Q
    ||||| ||||||||   ||||||| ||||||||  ||||||| ||| |||||||| || ||||||| ||||||||| | |||   ||||||| ||  |||    
T  29245865 acatgacaacaaaacccatacccgcggttacccgcccgaaccaaactcaatttgacgggttttccccgttttgactaggtttgggtatgggtatgagttt 29245964  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    || ||||||| |||||||||||||||||||  ||||| ||||||| ||| ||| ||| ||| |||||||| ||||    
T  29245965 tctccgatttcaaaacacgggtatgggacgaataacatgtatataggtacccaccccaaacccatacccataccc 29246039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 17853208 - 17853380
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||| ||||||||| | ||||| |||| ||||||| || ||||||| ||||||| ||| |||   ||||| | ||| ||||    
T  17853208 catggcaacaaaacgcatacccgcggttacccacctgaaccaaacctaatttgacgggttttccccgttttgattgggtttgggtatggatatgggtttt 17853307  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||| ||| ||||||||||||||||||||| | ||||||  || |||  |||||| |||||||| ||||    
T  17853308 ccccgatttcaaa-cacgggtatgggacgggtaacggatatatagatacccactccgaacccatacccataccc 17853380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 188
Target Start/End: Original strand, 13401919 - 13402059
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatgga-ttttcccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||| ||||||||  ||||||| |||||||||||| ||| |||| ||||||||||| | |||   ||||||| ||  ||||    
T  13401919 catggcaacaaaacccatacccgcggttacccgcccgaaccaaacccaatttgacggattttttccgttttgactaggtttgggtatgggtatgagtttt 13402018  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtat 188  Q
     ||||||||  |||||||||||||| ||||||||| |||||    
T  13402019 tcccgattttcaaacacgggtatggaacgggtaacgggtat 13402059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 38006470 - 38006554
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    ||||||||| |||||||| |||| |||| |||||||||||||| ||||||| |||||| ||| ||| ||||||| ||||||||||    
T  38006470 tgggtttgggttttccccaatttcaaaatacgggtatgggacgcgtaacagatatataggtacccaccccgaacccatacccaaa 38006554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 6155835 - 6156003
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcc-cgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | ||||| | ||||| ||| ||| ||| || | ||||| | || |||||  |||||||||||| |||   |||| |||||| ||||    
T  6155835 catggcaacaaaactcatacctgcggttatccacccgtaccaaatcaaatttaacgggttttcttcgttttgactgggtttgggtatgtgtttgggtttt 6155934  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    ||||||||| ||||||||||||| |||| ||||  ||||||||| ||| ||| ||||||| ||||||||||    
T  6155935 ccccgatttcaaaacacgggtataggacaggta--aggtatatatgtacccaccccgaacccatacccaaa 6156003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 12447542 - 12447467
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgttttgactgg 124  Q
    |||||||||||||   ||||||||||||||||| ||||||| |||||||||||| |||||| ||| ||||||||||    
T  12447542 catggcaacaaaacccatacccgtggttacccacccgaaccaaacccaatttgacggatttccccattttgactgg 12447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 28569020 - 28569106
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    |||| |||||||||||||||||||| ||||  |||||| |||||||||||| || ||||| ||| ||| ||||||| ||||||||||    
T  28569020 tatgagtttggattttccccgatttcaaaatgcgggtacgggacgggtaacggggatataggtacccaccccgaacccatacccaaa 28569106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 221
Target Start/End: Complemental strand, 38973033 - 38972923
Alignment:
Q  111 cccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactca 210  Q
    |||||||||||||| ||||  |||| |||||| |||| |||||||| |||||| ||||||||||  |||||| || ||||| ||| ||| ||||||| ||    
T  38973033 cccgttttgactgggtttaggtatgagtttgggtttttcccgatttcaaaacatgggtatgggataggtaacgggaatataggtacccaccccgaaccca 38972934  T
Q  211 tacccaaaccc 221  Q
    ||| |||||||    
T  38972933 tactcaaaccc 38972923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 35194014 - 35194077
Alignment:
Q  158 aaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||||||||||||||||||| |||||||| ||| ||| ||| ||||||||| |||||||    
T  35194014 aaaacacgggtatgggacgggtaacgggtatataggtacccaccccaaactcatactcaaaccc 35194077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 3564688 - 3564770
Alignment:
Q  83 ccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacg 165  Q
    ||||||| || ||||||||| || |||||||||||||||||| |||   ||||||| ||||||||| ||||||| ||||||||    
T  3564688 ccgaaccaaatccaatttgacgggttttcccgttttgactgggtttgggtatgggtatggattttctccgatttcaaaacacg 3564770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 42717551 - 42717625
Alignment:
Q  55 aacaaaatttatacccgtggttacccatccgaaccgaacccaatttga-tggattttcccgttttgactggattt 128  Q
    ||||||| | ||||| |||||||||| |||||||| ||||||||||||  || ||||||||||||||||||||||    
T  42717551 aacaaaactcatacctgtggttacccgtccgaaccaaacccaatttgacgggtttttcccgttttgactggattt 42717625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 222
Target Start/End: Complemental strand, 2681301 - 2681216
Alignment:
Q  137 gtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    |||||| ||||||||||||| |||| || |||| |||| ||||||  || |||| |||||||| ||||||| ||||||||||||||    
T  2681301 gtttgggttttccccgatttcaaaatacaggtacgggatgggtaatggggatatgagtatccaccccgaacccatacccaaaccct 2681216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 6810243 - 6810159
Alignment:
Q  137 gtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||| ||||||||||||| | |||||||||| || |||||||||  | |||||||||  || ||||||| |||||||||||||    
T  6810243 gtttgggttttccccgattttagaacacgggtacggaacgggtaacgaggatataagtactcaccccgaacccatacccaaaccc 6810159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 196
Target Start/End: Complemental strand, 24207858 - 24207710
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||||  ||||||| || |||||| ||||||| |||  | ||||| |  |||||||| ||||| ||  |||   ||||||||||  ||||    
T  24207858 acatggcaacaaaatccatacccgcgggtacccacccgaaccaaactaagtttgacgatttttcccgctttgattgagtttgggtatgggtttgagtttt 24207759  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtat 196  Q
    ||||||||| ||||||| ||||| | |||  ||||||| ||||||||||    
T  24207758 ccccgatttcaaaacacaggtatcgaacgaataacagggatataagtat 24207710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 40187571 - 40187742
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcc-cgttttgactggatttatatatgggtttggattt 146  Q
    |||||||| ||||| | ||||| | || ||||| |||||||| ||| || ||||| || |||||| || ||||||||| |||  | ||| |||||| |||    
T  40187571 acatggcagcaaaactcatacctgcgggtacccgtccgaaccaaactcattttgacgggttttcctcgctttgactgggtttggaaatgagtttgggttt 40187670  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    ||||| |||| |||||||||||  | |||||||||| |  ||||| |||| | |||| |||||||||||||||    
T  40187671 tccccaatttcaaaacacgggtgcgagacgggtaacggagatataggtattc-acccaaactcatacccaaac 40187742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 35311894 - 35311831
Alignment:
Q  150 ccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
    ||||||| ||||||||||||||||||||||||||| |||||| ||| |||  |||||| |||||    
T  35311894 ccgatttcaaaacacgggtatgggacgggtaacagatatataggtacccactccgaacccatac 35311831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 23044990 - 23045080
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    ||||||||| | ||||||||||||| |||| ||||||| |||| ||||||| |  ||||| ||| ||| ||||||| |||||| |||||||    
T  23044990 tatgggtttaggttttccccgatttcaaaatacgggtacgggatgggtaacggagatatatgtacccaccccgaacccataccaaaaccct 23045080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 28045770 - 28045657
Alignment:
Q  107 ttttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaa 206  Q
    ||||||| |||||||||  ||||  ||||||| ||| |||| ||| | || ||||||||  ||||||||||||||| |||||||| ||| || |||||||    
T  28045770 ttttcccattttgactgtgtttaggtatgggtatgggtttttccctaattcaaaacacgaatatgggacgggtaacgggtatataggta-cccacccgaa 28045672  T
Q  207 ctcatacccaaaccc 221  Q
    | |||||||| ||||    
T  28045671 cccatacccataccc 28045657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 10822531 - 10822608
Alignment:
Q  138 tttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcataccc 215  Q
    ||||| ||||| ||||||| ||||||||||||| ||||||||||| ||  |||| ||| ||| ||||||| |||||||    
T  10822531 tttgggttttctccgatttcaaaacacgggtataggacgggtaacggggttatatgtacccaccccgaacccataccc 10822608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 32574941 - 32575026
Alignment:
Q  136 ggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| ||||||||||||| ||||||| | || |||| |||||||| | ||||| ||| ||| ||||||| || ||||||||||    
T  32574941 ggtttgggttttccccgatttcaaaacacagatacgggatgggtaacatggatatatgtacccatcccgaacccaaacccaaaccc 32575026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 18116547 - 18116595
Alignment:
Q  174 acgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    ||||||||| || ||||| ||||||| ||||||||||||||||||||||    
T  18116547 acgggtaacggggatatatgtatccaccccgaactcatacccaaaccct 18116595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 43523807 - 43523759
Alignment:
Q  174 acgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    ||||||||| || ||||| ||||||| ||||||||||||||||||||||    
T  43523807 acgggtaacggggatatatgtatccaccccgaactcatacccaaaccct 43523759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 12447469 - 12447382
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||| ||||||  ||||  ||||||| |||||||||| |||||  |||||||| ||| ||| |||||||  ||||||||||||    
T  12447469 tgggtttgggttttccttgattgtaaaacacaggtatgggacaggtaatgggtatataggtacccaccccgaacctatacccaaaccc 12447382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 8453389 - 8453431
Alignment:
Q  149 cccgatttaaaaacacgggtatgggacgggtaacaggtatata 191  Q
    |||||||| ||||||||||||||||| ||||||||| ||||||    
T  8453389 cccgatttcaaaacacgggtatgggatgggtaacagatatata 8453431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 12251060 - 12250970
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    |||||| ||||||||| | |||||| |||| |||||||  |||||||||||||  ||||| ||| |||  | |||| ||||||||||||||    
T  12251060 tatgggcttggatttttcacgatttcaaaatacgggtaccggacgggtaacagagatatatgtacccactctgaacccatacccaaaccct 12250970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 175
Target Start/End: Original strand, 27088288 - 27088413
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttc 148  Q
    ||||||||||||||  ||||||||| ||| ||| ||||||| ||| || ||||| || ||| |||||||| ||| | |||   |||| |||| | |||||    
T  27088288 catggcaacaaaatccatacccgtgattatccacccgaaccaaactcattttgacgg-tttccccgttttaactaggtttgggtatgtgtttaggttttc 27088386  T
Q  149 cccgatttaaaaacacgggtatgggac 175  Q
    | |||||| || |||||||||||||||    
T  27088387 ctcgattttaagacacgggtatgggac 27088413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 8020693 - 8020616
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||||||| ||||||||||||  | | |||||||||| ||||| |||  || | ||||||||||| |||||||    
T  8020693 ttttccccgatttcaaaacacgggtactgaatgggtaacagggatataggtactcatctcgaactcatacgcaaaccc 8020616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 222
Target Start/End: Original strand, 12712561 - 12712646
Alignment:
Q  137 gtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    |||||| ||||| ||||||| |||| ||||||| ||||||| |||| |  ||||| ||| ||| | ||||| ||||||||||||||    
T  12712561 gtttgggttttctccgatttcaaaatacgggtacgggacggataacggagatatatgtacccacctcgaacccatacccaaaccct 12712646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 27302743 - 27302808
Alignment:
Q  141 ggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaa 206  Q
    |||||||||||||||| ||||||||| |||| ||||| |||||  |||||| ||| ||| ||||||    
T  27302743 ggattttccccgatttcaaaacacggatatgagacggataacaaatatataggtacccaccccgaa 27302808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 2985235 - 2985151
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    ||||||||  ||||| ||||||| || ||| |||| ||||||||||||| |||||||| |||  || ||||||  ||||||||||    
T  2985235 tgggtttgagttttctccgatttcaagacatgggtttgggacgggtaacgggtatataggtactcatcccgaaaccatacccaaa 2985151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 48 - 221
Target Start/End: Original strand, 44615388 - 44615562
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggattt 146  Q
    ||||||||||||||   ||||||||||||||||| ||  ||| ||| |||||||| || |||| |||||||||||||| |||   |||| |||||| |||    
T  44615388 acatggcaacaaaacccatacccgtggttacccacccagaccaaactcaatttgacgggtttttcccgttttgactgggtttgggtatgagtttgggttt 44615487  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  44615488 tccctgatttaaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaactcatacccaaaccc 44615562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 48 - 221
Target Start/End: Complemental strand, 44793181 - 44793007
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggattt 146  Q
    ||||||||||||||   ||||||||||||||||| ||  ||| ||| |||||||| || |||| |||||||||||||| |||   |||| |||||| |||    
T  44793181 acatggcaacaaaacccatacccgtggttacccacccagaccaaactcaatttgacgggtttttcccgttttgactgggtttgggtatgagtttgggttt 44793082  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  44793081 tccctgatttaaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaactcatacccaaaccc 44793007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 9982804 - 9982977
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | |||||||||||||| |  ||||||| || |||||||||||||||||| ||||||||||||| |||   |||| ||||| |||||    
T  9982804 catggcaacaaaactcatacccgtggttactctcccgaaccaaatccaatttgatggattttctccgttttgactgggtttgggtatgagtttgaatttt 9982903  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||| |||| |||||||||| |||||| |||||||  ||||||| ||| ||| ||||||| |||||||||||||    
T  9982904 ccccaatttcaaaacacgggaatgggatgggtaacgagtatataggtacccaccccgaacccatacccaaaccc 9982977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 51422033 - 51421860
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggatttt 147  Q
    |||||||| |||||  ||| ||||||||||||  ||||||| ||||||||||||||| |||||||  |||||||||| |||   ||||||| ||| ||||    
T  51422033 catggcaataaaatccatatccgtggttacccgcccgaaccaaacccaatttgatgggttttccccattttgactgggtttgggtatgggtatgggtttt 51421934  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
     |||||| | |||||||||||||||||||||||||| ||||||| ||| ||| ||||||| |||||||||||||    
T  51421933 tcccgatctcaaaacacgggtatgggacgggtaacatgtatatatgtacccaccccgaacccatacccaaaccc 51421860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 24236675 - 24236848
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | |||||| |||||||||  ||||||| ||| |||||||| || |||| |||||||||||||| ||||  ||||||| ||| ||||    
T  24236675 catggcaacaaaactcatacccatggttacccgcccgaaccaaactcaatttgacgggtttttcccgttttgactgggtttaggtatgggtatgggtttt 24236774  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| | ||||||||||||||| ||||| ||| |||||||| ||| ||| ||||||| ||||| |||||||    
T  24236775 ccccgatctcaaaacacgggtatggaacggggaacgggtatataggtacccaccccgaacccatactcaaaccc 24236848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 36187134 - 36187307
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   |||||||| |||||||  ||||||| ||| |||||||  || ||||||| ||||||||||| |||   ||||||| ||| ||||    
T  36187134 catggcaacaaaacccatacccgtcgttacccgcccgaaccaaactcaatttggcgggttttccccgttttgactgggtttgggtatgggtatgggtttt 36187233  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| | ||||||||||||||||||||||||| |||||||| ||| ||| || |||| |||||||||||||    
T  36187234 ccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccctgaacccatacccaaaccc 36187307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 49250687 - 49250860
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggatttt 147  Q
    |||| |||||||||| ||||||||||||| ||  ||||||| ||  |||||||| || ||||| ||||||||||||| |||   ||||||| ||  ||||    
T  49250687 catgacaacaaaattcatacccgtggttatccgcccgaaccaaattcaatttgacgggttttctccgttttgactgggtttgggtatgggtatgagtttt 49250786  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| | ||||||||||||||||||||||||  |||||||| ||||||| | ||||| |||||||||||||    
T  49250787 ccccgatctcaaaacacgggtatgggacgggtaatgggtatataggtatccacctcgaacccatacccaaaccc 49250860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 18354053 - 18354162
Alignment:
Q  107 ttttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaa 206  Q
    ||||||||||||||||||||||  |||||||| ||| ||||||||||||| |||||| |||||||||||||||||| |||||||||||  ||| ||||||    
T  18354053 ttttcccgttttgactggatttgaatatgggtatgggttttccccgatttcaaaacatgggtatgggacgggtaacgggtatataagttcccaccccgaa 18354152  T
Q  207 ctcataccca 216  Q
    |  |||||||    
T  18354153 ccgataccca 18354162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 216
Target Start/End: Complemental strand, 17135122 - 17134954
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||| ||||||||  ||||||| |||||||||||| |||||||| | ||||||||||| |||   | ||||| ||| ||||    
T  17135122 catggcaacaaaacccatacccgcggttacccgcccgaaccaaacccaatttgacggattttctctgttttgactgggtttgggtgtgggtatgggtttt 17135023  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcataccca 216  Q
    ||||||||| |||||||||||||| |||||||||| |||||||| ||| |   ||||||| ||||||||    
T  17135022 ccccgatttcaaaacacgggtatgagacgggtaacgggtatataggtaccatccccgaacccataccca 17134954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 12495185 - 12495012
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgt-tttgactggatttatatatgggtttggatttt 147  Q
    |||| |||||||||| ||||  ||||||||||| | ||||| || ||||||||| ||||||||||   ||||||||| |||   ||||||||| | ||||    
T  12495185 catgacaacaaaattcatacatgtggttacccacctgaaccaaatccaatttgacggattttccccactttgactgggtttcggtatgggttttggtttt 12495086  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
     |||||||| ||||||||| ||||||||| ||||| |||||||| ||| ||| | ||||| |||||||||||||    
T  12495085 tcccgatttcaaaacacggatatgggacgtgtaacgggtatataggtacccacctcgaacccatacccaaaccc 12495012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 34673196 - 34673368
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggatttt 147  Q
    |||| |||||||| | ||||| ||| ||||||  ||||||| |||||||||| | ||||||||||  |||| ||||| |||   ||||||||||| ||||    
T  34673196 catgacaacaaaactcataccagtgattacccgcccgaaccaaacccaatttaacggattttccccattttaactgggtttgggtatgggtttgggtttt 34673295  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaacc 220  Q
     ||| |||| |||||||||||||| ||| |||||| |||||||| ||| ||| ||||||| ||||||||||||    
T  34673296 tcccaatttcaaaacacgggtatgagactggtaacgggtatataggtacccaccccgaacccatacccaaacc 34673368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 5181214 - 5181071
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||| ||||||||  ||||||| ||  |||||||| || |||||||  |||||||||| ||||  ||||||| ||| ||||    
T  5181214 catggcaacaaaacccatacccgcggttacccgcccgaaccaaattcaatttgacgggttttccccattttgactgggtttaggtatgggtatgggtttt 5181115  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatata 191  Q
    ||||||||| |||| |||||||||||||||||||| ||||||||    
T  5181114 ccccgatttcaaaatacgggtatgggacgggtaacgggtatata 5181071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 16409075 - 16408944
Alignment:
Q  91 aacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtata 189  Q
    |||||||||||| || ||||||| ||||||||||| |||   ||||||| ||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  16409075 aacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttttccccaatttcaaaacacgggtatgggacgggtaacaggtata 16408976  T
Q  190 taagtatccaacccgaactcatacccaaaccc 221  Q
    || ||| | | ||||||| |||| | ||||||    
T  16408975 taggtaccgaccccgaacccatagctaaaccc 16408944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 19572426 - 19572591
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||  ||||||||||  ||||||| |||| ||||||| || |||||||  |||||||||| |||   ||||||| ||| ||||    
T  19572426 catggcaacaaaacccatacttgtggttacccgcccgaaccaaacctaatttgacgggttttccccattttgactgggtttgggtatgggtatgggtttt 19572525  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
     |||||||| |||||||||||||||||| |||||| |||||||| ||| ||| ||||||| |||||    
T  19572526 tcccgatttcaaaacacgggtatgggacaggtaacgggtatataggtacccaccccgaacccatac 19572591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 23490685 - 23490858
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   |||| | | |||||||  ||||||| || ||||||||| || |||| || ||||||||||| |||   ||||||| ||| ||||    
T  23490685 catggcaacaaaacccatactcatagttacccgcccgaaccaaatccaatttgacgggtttttcctgttttgactgggtttgggtatgggtatgggtttt 23490784  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| |  |||||||||||||||||||||||| |||||||| ||| ||| ||||||| |||||| ||||||    
T  23490785 ccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccaaaaccc 23490858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 181
Target Start/End: Complemental strand, 23968754 - 23968621
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||| ||||||||  ||||||| |||||||||||| ||||||||||  |||||| ||| |||   ||||||| ||| ||||    
T  23968754 catggcaacaaaacccatacccgcggttacccgcccgaaccaaacccaatttgacggattttccccattttgattgggtttgggtatgggtatgggtttt 23968655  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaa 181  Q
    ||||| ||| ||||||||||||||||||||||||    
T  23968654 ccccggtttcaaaacacgggtatgggacgggtaa 23968621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 29871200 - 29871372
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcc-cgttttgactggatttatatatgggtttggatttt 147  Q
    |||| |||||||| | |||| |||||||| |||||||| || ||| |||||||| || |||||| ||||||||||   |||   |||| |||||| ||||    
T  29871200 catgacaacaaaactcatactcgtggttatccatccga-ccaaactcaatttgacgggttttcctcgttttgactaagtttgggtatgagtttgggtttt 29871298  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    | ||||||| |||||| ||||||||||| |||||| |||||||| ||| ||| || ||||||||||||||||||    
T  29871299 ctccgatttcaaaacatgggtatgggacaggtaactggtatataggtacccaccctgaactcatacccaaaccc 29871372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 221
Target Start/End: Complemental strand, 29936581 - 29936418
Alignment:
Q  65 atacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgact------ggatttatatatgggtttggattttccccgattta 157  Q
    ||||||||||||||||  ||||||| |||||||||||| || ||||||| |||||||||      || | |   ||||||| ||| ||||||||||| |     
T  29936581 atacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactaagtttgggtatgagtatgggtatgggttttccccgatctc 29936482  T
Q  158 aaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||| |||||||||||||||||||| |||||||| ||| ||| ||||||| |||||||||||||    
T  29936481 aaaatacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 29936418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 24711004 - 24710879
Alignment:
Q  67 acccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacg 165  Q
    ||||||| ||| ||| ||||||| ||  |||||||| || ||||||| ||||||||||| |||  ||||| || ||| ||||||||||| | ||||||||    
T  24711004 acccgtgattatccacccgaaccaaattcaatttgacgggttttccccgttttgactgggtttggatatgagtatgggttttccccgatctcaaaacacg 24710905  T
Q  166 ggtatgggacgggtaacaggtatata 191  Q
    ||||||||||||||||| ||||||||    
T  24710904 ggtatgggacgggtaacgggtatata 24710879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 34611248 - 34611075
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||| |||||||||  ||||||||||||||||  | ||||| || ||||||||| || ||||||| ||||||| || ||||   ||||||| ||| ||||    
T  34611248 catgacaacaaaatccatacccgtggttacccgcctgaaccaaatccaatttgacgggttttccccgttttgattgaatttgggtatgggtatgggtttt 34611149  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
     |||||| | ||||||||||||||||||  |||||  ||||||| |||  || ||||||| |||||||||||||    
T  34611148 tcccgatctcaaaacacgggtatgggacatgtaacgtgtatataggtactcaccccgaacccatacccaaaccc 34611075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 28298013 - 28297936
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||||| |  |||||||||||||||||||||||| |||||||| ||| ||| ||||||| |||||||||||||    
T  28298013 ttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 28297936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 164
Target Start/End: Complemental strand, 13390571 - 13390456
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttc 148  Q
    |||||||||||||   ||||||  ||||||||  ||||||| |||||||||||| || ||| |||||||||||||| |||   ||||||| || ||||||    
T  13390571 catggcaacaaaacccatacccacggttacccgcccgaaccaaacccaatttgacgggtttccccgttttgactgggtttgggtatgggtatgaattttc 13390472  T
Q  149 cccgatttaaaaacac 164  Q
    |||||||| |||||||    
T  13390471 cccgatttcaaaacac 13390456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 48125686 - 48125768
Alignment:
Q  137 gtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    ||||||||||| || ||||| |||||||||||| ||||||||||||  | ||||| ||||||| ||||||| |||||||||||    
T  48125686 gtttggatttttcctgattttaaaacacgggtacgggacgggtaacgaggatataggtatccaccccgaacccatacccaaac 48125768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 3627995 - 3628064
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| || ||| ||| ||||||| |||||    
T  3627995 ttttccccgatttcaaaacacgggtatgggacgggtaacgggtatgtaggtacccaccccgaacccatac 3628064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 10450070 - 10450147
Alignment:
Q  145 tttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    ||||||| |||| |||| ||||||| ||| ||||||||||| ||||| ||| ||| ||||||||||||||||||||||    
T  10450070 tttccccaattttaaaatacgggtacggggcgggtaacagggatatatgtacccaccccgaactcatacccaaaccct 10450147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 40087378 - 40087542
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | ||||||| ||||| || || ||||| ||  |||||||| ||||||| |||||||||||||  |||   ||||||| ||  ||||    
T  40087378 catggcaacaaaactcatacccgcggttatccgtctgaaccaaattcaatttgacggattttccccgttttgactgagtttgggtatgggtatgagtttt 40087477  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
    |||||| || ||||||| ||||||||| | ||||| || ||||| ||| ||| |||||||||||||    
T  40087478 ccccga-ttcaaaacacaggtatgggatgagtaacgggaatataggtacccaccccgaactcatac 40087542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 38106380 - 38106316
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc 113  Q
    ||||||||||||| | |||| | |||||||||||||||||| ||| |||||||||||||||||||    
T  38106380 catggcaacaaaactcatactcatggttacccatccgaaccaaacacaatttgatggattttccc 38106316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 45866100 - 45866272
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttc 148  Q
    |||||||||||||   |||| || ||||||||  |||| || |||| || |||| || ||||| | |||||||| | |||   ||||||| ||| |||||    
T  45866100 catggcaacaaaacccatactcgcggttacccgcccgagccaaacctaaattgacgggttttctccttttgactaggtttgggtatgggtatgggttttc 45866199  T
Q  149 cccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||| |||||||||||||| ||| |||||   ||||||| ||| ||| ||| |||||||||||| ||||    
T  45866200 cccgatttcaaaacacgggtatgagacaggtaatgagtatataggtacccaccccaaactcatacccataccc 45866272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 16433093 - 16433251
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttc 148  Q
    |||||||| ||||  |||| ||||||||||||||||||||| ||| |||||||| ||||||||||  |||     ||||       |||||||  |||||    
T  16433093 catggcaataaaacctatatccgtggttacccatccgaaccaaactcaatttgacggattttccccatttt----gatt-------gggtttgagttttc 16433181  T
Q  149 cccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
     ||||||| ||||||||||||||||||||||||| | |||||| ||| |   ||||||| |||||||||||||    
T  16433182 tccgatttcaaaacacgggtatgggacgggtaacggatatataggtacc---cccgaacccatacccaaaccc 16433251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 20774741 - 20774665
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactgg 124  Q
    |||||||||||||   |||| |||||||||||  ||||||| |||||||||||| ||||||| ||||||||||||||    
T  20774741 catggcaacaaaacccatactcgtggttacccgcccgaaccaaacccaatttgacggattttccccgttttgactgg 20774665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 39616448 - 39616324
Alignment:
Q  68 cccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgg 166  Q
    |||| ||||||||  ||||||| ||| |||||||| |  ||||||| ||||||||||  |||   |||| || ||| |||||||| |||| |||||||||    
T  39616448 cccgcggttacccgcccgaaccaaactcaatttgacgagttttccccgttttgactgagtttgggtatgagtatgggttttcccctatttcaaaacacgg 39616349  T
Q  167 gtatgggacgggtaacaggtatata 191  Q
    |||| |||||||||||| |||||||    
T  39616348 gtataggacgggtaacaagtatata 39616324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 42707810 - 42707898
Alignment:
Q  107 ttttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagta 195  Q
    ||||||| |||||||||| |||   |||| || ||  ||||| ||||||| ||||||||||||||||||||||||| || |||||||||    
T  42707810 ttttcccattttgactgggtttgggtatgagtatgagttttctccgatttcaaaacacgggtatgggacgggtaacgggaatataagta 42707898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 34060035 - 34060106
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcataccc 215  Q
    |||||| |||||| |||||||||||||| ||||| ||||||||||||| ||| |||  |||||| |||||||    
T  34060035 ttttcctcgatttcaaaacacgggtatgagacggataacaggtatataggtacccactccgaacccataccc 34060106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 44632151 - 44632206
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatcca 199  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| |||  |||||||    
T  44632151 ttttctccgatttcaaaacacgggtatgggacgggtaacaggtgtatgggtatcca 44632206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 33293504 - 33293578
Alignment:
Q  107 ttttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaa 181  Q
    |||| ||||||||| ||| |||   |||| |||||| |||| |||||||| ||||||||||||||||||||||||    
T  33293504 tttttccgttttgattgggtttgggtatgagtttgggtttttcccgatttcaaaacacgggtatgggacgggtaa 33293578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 222
Target Start/End: Original strand, 35069871 - 35069977
Alignment:
Q  116 tttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcataccc 215  Q
    |||||||||||||   |||| |||||  ||||||||||||| | || |||||||   ||||||||||||| ||||| ||| ||| ||||||| ||||| |    
T  35069871 tttgactggatttgggtatgagtttgagttttccccgatttcataatacgggtacaagacgggtaacagggatatatgtacccaccccgaacccatactc 35069970  T
Q  216 aaaccct 222  Q
    |||||||    
T  35069971 aaaccct 35069977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 50426672 - 50426742
Alignment:
Q  145 tttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcataccc 215  Q
    |||||| ||||| |||||||||||||| ||||| |||| |||||||| ||| ||| ||||||| |||||||    
T  50426672 tttccctgatttcaaaacacgggtatgagacggataacgggtatataggtacccaccccgaacccataccc 50426742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 10778577 - 10778646
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
    |||| |||||||| ||||||||||||||||||||||||| ||  ||||  |||||| ||||||| |||||    
T  10778577 tttttcccgatttcaaaacacgggtatgggacgggtaacggggttatagatatccaccccgaacccatac 10778646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 16237308 - 16237392
Alignment:
Q  138 tttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    ||||| ||||||||||||| |||| ||||||| ||||||||||||  | ||||| |||   | ||||||| ||||||||||||||    
T  16237308 tttgggttttccccgatttcaaaatacgggtaagggacgggtaacgaggatatatgtactaaccccgaacccatacccaaaccct 16237392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 221
Target Start/End: Complemental strand, 16903613 - 16903525
Alignment:
Q  133 atgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||| |||||| ||| |||| |||||||| ||| ||||  |||||  || ||||| ||| ||| |||||||||||||||||||||    
T  16903613 atgggtttagatttttcccaattttaaaacacgagtacgggataggtaatggggatataggtacccaccccgaactcatacccaaaccc 16903525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 28298121 - 28298041
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggattt 128  Q
    |||| |||||||| | ||| ||||||||||||| ||||||| || ||||||||| || ||||||| ||||||| |||||||    
T  28298121 catgtcaacaaaactcatatccgtggttacccacccgaaccaaatccaatttgacgggttttccctgttttgattggattt 28298041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 39219346 - 39219262
Alignment:
Q  135 gggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    |||||||| ||||||||||||| |||||||||||| || ||  ||||| || ||| | ||| ||| ||||||| |||||||||||    
T  39219346 gggtttgggttttccccgattttaaaacacgggtacggaacaagtaacggggatacatgtacccaccccgaacccatacccaaac 39219262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 19003664 - 19003731
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatcca 199  Q
    |||||||| || ||||||||||||  |||| ||||||||||||||| |||| || ||||| |||||||    
T  19003664 tatgggttcgggttttccccgattacaaaatacgggtatgggacggataacggggatatatgtatcca 19003731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 35936827 - 35936886
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatata 191  Q
    |||| |||||| ||||||||||||| ||| |||| ||||||||||| |||| ||||||||    
T  35936827 tatgagtttgggttttccccgatttcaaatcacgagtatgggacggataacgggtatata 35936886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 38686748 - 38686709
Alignment:
Q  137 gtttggattttccccgatttaaaaacacgggtatgggacg 176  Q
    |||||||||||||||||||| |||| ||||||||||||||    
T  38686748 gtttggattttccccgattttaaaatacgggtatgggacg 38686709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 42439668 - 42439755
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    ||||||| || |||||  ||||| | |||||| |||||||||||| ||||| |||||||| ||| ||| ||||||| |||| ||||||    
T  42439668 tatgggtatgaattttttccgatctcaaaacatgggtatgggacgagtaacgggtatataggtacccaccccgaacccatatccaaac 42439755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 23058557 - 23058467
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    ||||||||||  ||||| ||||||| ||||  || ||| | |||||||||| || ||||| ||| ||| ||||||| ||||||||||||||    
T  23058557 tatgggtttgagttttctccgatttcaaaatgcgagtacgagacgggtaacggggatataggtacccaccccgaacccatacccaaaccct 23058467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 5283519 - 5283580
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt 110  Q
    |||| |||||||| | |||| ||||| ||||||||||| || ||||||| ||||||||||||    
T  5283519 catgacaacaaaactcatactcgtgggtacccatccgagccaaacccaaattgatggatttt 5283580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 13798329 - 13798240
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||| |||||| |||| |||||||| |||||||||||||| || |||||||  | |||||  |||||| ||| || ||||||| ||||||    
T  13798329 tatgagtttgggtttttcccgatttcaaaacacgggtatgagatgggtaacgaggatatatttatccaccccaaattcatacctaaaccc 13798240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 49740940 - 49741009
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgtttt 118  Q
    ||||||||||||||  ||||||||||||| |||   ||||| ||| |||||||| |||||||||| ||||    
T  49740940 catggcaacaaaatccatacccgtggttatccacttgaaccaaactcaatttgacggattttcccctttt 49741009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 12718770 - 12718858
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaacc 220  Q
    |||| |||||||||||||||||||| | || ||| ||| | |||||||||| |  ||||| ||| ||| || |||| ||||||||||||    
T  12718770 tatgagtttggattttccccgatttcataatacgtgtacgagacgggtaacggaaatatatgtacccaccctgaacccatacccaaacc 12718858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 8e-39; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 69 - 221
Target Start/End: Original strand, 37960896 - 37961049
Alignment:
Q  69 ccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacggg 167  Q
    |||| |||||||| |||||||||||| |||||||||| |||| |||||||||||| | |||   |||| |||||| ||||||||||||||||||||||||    
T  37960896 ccgtagttacccacccgaaccgaacctaatttgatgggtttttcccgttttgactaggtttgggtatgagtttgggttttccccgatttaaaaacacggg 37960995  T
Q  168 tatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||| ||||||||||||||| |||  || |||||||||||||||||||||    
T  37960996 tatgggacaggtaacaggtatataggtacacaccccgaactcatacccaaaccc 37961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 43113540 - 43113710
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||| |||| | ||||||||||||||||| ||||||| |||||||||| | || ||||||| | ||||||||| |||   |||| | |||| ||||    
T  43113540 catggcaataaaactcatacccgtggttacccacccgaaccaaacccaatttaacgggttttccctgctttgactgggtttgcgtatgagattgggtttt 43113639  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
     |||||||| |||||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  43113640 tcccgatttcaaaacacgggcatgggacgggtaacaggtatataggtacccaccccgaactcatacccaaa 43113710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 32303235 - 32303062
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||  ||||| | |||||||||||| || ||||||| ||||||||||| |||   ||||||| ||| ||||    
T  32303235 catggcaacaaaacccatacccgtggttacccgcccgaaacaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggtttt 32303136  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| |  |||||||||||||||||||||||| |||||||| ||| ||| ||||||| |||||||||||||    
T  32303135 ccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 32303062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 20399766 - 20399593
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||   |||||| |||||||||||| |  ||||||| ||||||||||| |||   ||||||||||| ||||    
T  20399766 catggcaacaaaaccaatacccgtggttacccgctcgaaccaaacccaatttgacgagttttccccgttttgactgggtttgggtatgggtttgggtttt 20399667  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    | ||||||| ||||||||||||||||||||||||| ||||||||  || ||| ||||||| ||| |||||||||    
T  20399666 ctccgatttcaaaacacgggtatgggacgggtaacgggtatatagatacccaccccgaacccattcccaaaccc 20399593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 5858565 - 5858706
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattt 146  Q
    |||||||||||||||  ||||| ||||||||| | ||||||| || ||||||||| || ||||||| ||||||| ||| |||   ||||||||||| |||    
T  5858565 acatggcaacaaaatccatacctgtggttacctacccgaaccaaatccaatttgacgggttttccccgttttgattgggtttgggtatgggtttgggttt 5858664  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaacaggtat 188  Q
    | |||||||||||||||||||||||||||||||||| |||||    
T  5858665 ttcccgatttaaaaacacgggtatgggacgggtaacgggtat 5858706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 24928123 - 24927950
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||| ||||||||  ||||||| |||||||||||| || ||||||| ||||||||||| |||   ||||||| ||| ||||    
T  24928123 catggcaacaaaacccatacccgcggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggtttt 24928024  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||| ||| |  ||||||||||||| |||||||||| |||||||| ||| ||| ||||||| |||||||||||||    
T  24928023 ccctgatctcgaaacacgggtatgagacgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 24927950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 17469417 - 17469256
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   |||||||| |||||||| ||||||| |||||||||||| |||||||||| |||||||||||            |||||| ||||    
T  17469417 catggcaacaaaacccatacccgtagttacccacccgaaccaaacccaatttgacggattttccccgttttgactgg------------gtttgggtttt 17469330  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||| ||| ||| ||| |||||||||||||    
T  17469329 ccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccaaacccatacccaaaccc 17469256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 213
Target Start/End: Complemental strand, 27932588 - 27932422
Alignment:
Q  49 catggcaacaaaatttatacccgtgg-ttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattt 146  Q
    |||| |||||||| | ||||||| || ||||||  ||||||| |||||||||||| || ||||||| ||||||||||| |||   ||||||| ||| |||    
T  27932588 catgacaacaaaactcatacccgcgggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttt 27932489  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||| ||| ||| ||||||| |||||    
T  27932488 tccccgatttcaaaacacgggtatgggacgagtaacgggtatataggtacccaccccgaacccatac 27932422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 1063687 - 1063511
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatat------atgggtttg 141  Q
    ||||||||||||| | ||||||||||||||||  ||||||| ||||| |||||| || ||||||| ||||||||||| | |   |      |||||| ||    
T  1063687 catggcaacaaaactcatacccgtggttacccgcccgaaccaaacccgatttgacgggttttccccgttttgactgggtgtgggtgtgggtatgggtatg 1063588  T
Q  142 gattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    | |||| |||||||| |||||||||||||||||||| |||| |||||||||||| ||| ||||||||||||||||||    
T  1063587 ggtttttcccgatttcaaaacacgggtatgggacggttaacgggtatataagtacccaccccgaactcatacccaaa 1063511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 73 - 221
Target Start/End: Original strand, 29108760 - 29108909
Alignment:
Q  73 ggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatg 171  Q
    |||||| | |||||||| |||||||||||| || ||||||| ||||||||||| |||   ||||||| ||| |||| |||||||| |||||| |||||||    
T  29108760 ggttactcgtccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggtttttcccgattttaaaacatgggtatg 29108859  T
Q  172 ggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||||| |||||||| ||| ||| ||||||| |||||||| ||||    
T  29108860 ggacgggtaacgggtatatatgtacccaccccgaacccatacccataccc 29108909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 39445490 - 39445663
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||| |||||  ||| ||| |||||| | |||||||| ||| |||||||| |||||||||| ||||||||| | |||   ||||||| ||| ||||    
T  39445490 catggcaataaaatcaatatccgcggttactcgtccgaaccaaactcaatttgacggattttccccgttttgactaggtttgggtatgggtatgggtttt 39445589  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
     |||||||| |||||||||||||||||| |||||| ||| |||| ||| ||| |||||||||||||||| ||||    
T  39445590 tcccgatttcaaaacacgggtatgggacaggtaacgggtttataggtacccaccccgaactcatacccataccc 39445663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 219
Target Start/End: Complemental strand, 1012792 - 1012622
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcc-cgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||| |||||  ||||||||||||||||| ||||| | |||||||||||| || |||||| |||||||| ||  |||   |||| |||||| ||||    
T  1012792 catggcaataaaatccatacccgtggttacccacccgaatcaaacccaatttgacgggttttcctcgttttgattgagtttgggtatgagtttgggtttt 1012693  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    ||||||||| |||||| | |||||||||||||||  |||||||| ||| ||| ||||||| |||||||||||    
T  1012692 ccccgattt-aaaacatgagtatgggacgggtaatgggtatataggtacccaccccgaacccatacccaaac 1012622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 34777234 - 34777070
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | ||||||||| |||||| |||||||| |||||||||| | || |||| |||||||||||||| |||      |||| ||| ||||    
T  34777234 catggcaacaaaactcatacccgtgattacccgtccgaaccaaacccaatttaacgggtttttcccgttttgactgggttt------gggtatgggtttt 34777141  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
     |||||| | ||||||||||||||| ||| ||||||||||| || ||| ||| ||||||| ||||||||||    
T  34777140 tcccgatctcaaaacacgggtatggaacgagtaacaggtatttaggtacccaccccgaacccatacccaaa 34777070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 34139578 - 34139449
Alignment:
Q  91 aacccaatttgatggattttcc-cgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtata 189  Q
    |||||||||||| || |||||| |||||||||||| |||   |||| |||||| ||||||||||||||||||||||| ||| ||||  ||||||||||||    
T  34139578 aacccaatttgacgggttttcctcgttttgactgggtttgggtatgtgtttgg-ttttccccgatttaaaaacacggatataggacatgtaacaggtata 34139480  T
Q  190 taagtatccaacccgaactcatacccaaaccc 221  Q
    || ||| ||| ||||||| |||||||||||||    
T  34139479 taggtacccaccccgaac-catacccaaaccc 34139449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 218
Target Start/End: Complemental strand, 24569079 - 24568942
Alignment:
Q  81 atccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggta 180  Q
    ||||||||| |||| ||||||| || |||||||  ||||| ||| ||||  ||||||| |||||||| |||||||| | |||| ||||||||||| ||||    
T  24569079 atccgaaccaaacctaatttgacgggttttccccgtttgattgggtttaggtatgggtatggatttttcccgatttcacaacatgggtatgggacaggta 24568980  T
Q  181 acaggtatataagtatccaacccgaactcatacccaaa 218  Q
     | |||||||| ||||||| ||||||| ||||| ||||    
T  24568979 gcgggtatataggtatccaccccgaacccatactcaaa 24568942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 216
Target Start/End: Original strand, 40248321 - 40248453
Alignment:
Q  85 gaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaaca 183  Q
    ||||| |||||||||||| || |||| |||||||||||||| |||   ||||||| |   ||||||||||||| |||||||||||||| ||||| ||||     
T  40248321 gaaccaaacccaatttgacgggtttttcccgttttgactgggtttgggtatgggtatatgttttccccgatttcaaaacacgggtatgagacggataacg 40248420  T
Q  184 ggtatataagtatccaacccgaactcataccca 216  Q
    |||||||| ||| ||| ||||||| ||||||||    
T  40248421 ggtatataggtacccatcccgaacccataccca 40248453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 191
Target Start/End: Original strand, 4230648 - 4230787
Alignment:
Q  53 gcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggattttcccc 151  Q
    ||||||||||  ||||  ||||||||||  ||||||| |||||||||||| || |||||||  |||||||||| |||   ||||||| ||| ||||||||    
T  4230648 gcaacaaaatccatacatgtggttacccgcccgaaccaaacccaatttgacgggttttccccattttgactgggtttgggtatgggtatgggttttcccc 4230747  T
Q  152 gatttaaaaacacgggtatgggacgggtaacaggtatata 191  Q
    ||| | ||||||| ||||||||||| ||||| ||||||||    
T  4230748 gatctcaaaacacaggtatgggacgagtaacgggtatata 4230787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 14687489 - 14687402
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    ||||| ||||| ||||||||||||| ||||||| ||||||||||| | |||||| ||||| ||||||| ||||||| |||||||||||    
T  14687489 tatggatttgggttttccccgatttcaaaacacaggtatgggacgagaaacagggatatatgtatccaccccgaacccatacccaaac 14687402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 24869997 - 24870111
Alignment:
Q  107 ttttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaa 206  Q
    ||||||||||||||||| ||||   ||||| | ||  ||||||||||||| |||||||||||||| |||||||||| |||||||| ||| ||| |||||     
T  24869997 ttttcccgttttgactgaatttgggtatggctatgagttttccccgattttaaaacacgggtatgtgacgggtaacgggtatataggtacccaccccgag 24870096  T
Q  207 ctcatacccaaaccc 221  Q
    | |||||| ||||||    
T  24870097 cccatacctaaaccc 24870111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 173
Target Start/End: Original strand, 2075748 - 2075873
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | ||| ||||||||||||  | ||||| |||||||||||| |||||||| ||||||||||||| |||   ||||||| ||| ||||    
T  2075748 catggcaacaaaactcatatccgtggttacccgcctgaaccaaacccaatttgacggattttctccgttttgactgggtttgggtatgggtatgggtttt 2075847  T
Q  148 ccccgatttaaaaacacgggtatggg 173  Q
     |||||| | |||||| |||||||||    
T  2075848 tcccgatctcaaaacatgggtatggg 2075873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 9642351 - 9642430
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||  ||||  |||||| ||||||| |||||    
T  9642351 tgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacggggttatatatatccatcccgaacccatac 9642430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 209
Target Start/End: Complemental strand, 35215689 - 35215549
Alignment:
Q  69 ccgtggttacccatccgaaccgaacccaatttgat-ggattttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacggg 167  Q
    |||||||||||| ||||| || ||||||||||||  || ||||||||||||||| || |||   ||||  ||||| ||||||| ||||| ||||||||||    
T  35215689 ccgtggttacccgtccgacccaaacccaatttgaccggtttttcccgttttgaccgggtttgggtatgattttgggttttccc-gatttcaaaacacggg 35215591  T
Q  168 tatgggacgggtaacaggtatataagtatccaacccgaactc 209  Q
    |||| ||||||||||  ||||||| ||| ||| ||| |||||    
T  35215590 tatgagacgggtaacgagtatataggtacccaccccaaactc 35215549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 221
Target Start/End: Complemental strand, 45236194 - 45236066
Alignment:
Q  94 ccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataa 192  Q
    ||||||||| || ||||||| ||||||||||  |||   ||||||| ||  ||||||| ||||| ||||||||||||||||||||||||  ||||||||     
T  45236194 ccaatttgacgggttttccccgttttgactgagtttgagtatgggtatgagttttccctgatttcaaaacacgggtatgggacgggtaatgggtatatag 45236095  T
Q  193 gtatccaacccgaactcatacccaaaccc 221  Q
    ||| ||| ||||||| |||| ||| ||||    
T  45236094 gtacccaccccgaacccatatccataccc 45236066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 219
Target Start/End: Original strand, 27777112 - 27777283
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggatttt 147  Q
    |||| |||||||| | |||||||  | |||| ||||||||| |||  ||||||| || ||||| ||||||||||||| |||   |||| |||||  ||||    
T  27777112 catgacaacaaaactcatacccgcaggtacctatccgaaccaaacttaatttgacgggttttctccgttttgactgggtttgggtatgtgtttgagtttt 27777211  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
     |||||||| ||||||| |||| ||||| ||||||||  ||| | ||| ||| ||||||| |||||||||||    
T  27777212 tcccgatttcaaaacacaggtacgggacaggtaacagagatacaggtacccaccccgaacccatacccaaac 27777283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 15068586 - 15068675
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    |||||||| || ||||||||||||| |||| ||||||| ||||| |||||| || ||||| ||||||| ||||||| ||||||| ||||||    
T  15068586 tatgggttcgggttttccccgatttcaaaatacgggtacgggacaggtaac-gggatatatgtatccaccccgaacccatacccgaaccct 15068675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 36131843 - 36132001
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggatttt 147  Q
    |||| |||||||||| ||| ||||||||||||| ||||||| |||| |||||||||||||||  ||||||||| |||            |||||  ||||    
T  36131843 catgacaacaaaattcatatccgtggttacccacccgaaccaaacctaatttgatggattttttccgttttgattgg------------gtttgagtttt 36131930  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    |||| |||| |||||||| |||||||| ||||||  || ||| | ||||||| ||||||||||||| ||||    
T  36131931 cccctatttcaaaacacgagtatgggatgggtaaagggcatacaggtatccaccccgaactcatacacaaa 36132001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 221
Target Start/End: Original strand, 17084111 - 17084194
Alignment:
Q  138 tttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||| ||||| ||||||| |||||||||||| | |||||||||| || |||||  || ||| |||||||||||| ||||||||    
T  17084111 tttgggttttctccgattttaaaacacgggtacgagacgggtaacggggatatagatacccaccccgaactcatatccaaaccc 17084194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 17220851 - 17220760
Alignment:
Q  84 cgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatggga 174  Q
    |||||| || ||||||||| || |||||||  |||||||||  |||   ||||||| ||||||||||||||||| |||||||||||||||||    
T  17220851 cgaaccaaatccaatttgacgggttttccccattttgactgagtttgggtatgggtatggattttccccgatttcaaaacacgggtatggga 17220760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 221
Target Start/End: Complemental strand, 14155670 - 14155533
Alignment:
Q  85 gaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaaca 183  Q
    ||||| |||||||||||| || ||||||| | | ||||||| |||   |||| |||||| |||| |||||||| |||||||||||||  || |||||||     
T  14155670 gaaccaaacccaatttgacgggttttccccggtatgactgggtttgggtatgagtttgggtttttcccgatttcaaaacacgggtataagatgggtaacg 14155571  T
Q  184 ggtatataagtatccaacccgaactcatacccaaaccc 221  Q
     | |||||  |||||| ||| || ||||||||||||||    
T  14155570 aggatatatttatccaccccaaattcatacccaaaccc 14155533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 28345606 - 28345494
Alignment:
Q  107 ttttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaa 206  Q
    |||||||| ||||||||| |||   ||| |||||||||||| |||||||  ||||||||||||  ||| |||||||  | ||||| | | ||| ||||||    
T  28345606 ttttcccgctttgactgggtttcggtataggtttggattttacccgattccaaaacacgggtacaggatgggtaacgaggatataggcacccaccccgaa 28345507  T
Q  207 ctcatacccaaac 219  Q
    | |||||||||||    
T  28345506 cccatacccaaac 28345494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 2075915 - 2075864
Alignment:
Q  165 gggtatgggacgggtaacaggtatataagtatccaacccgaactcataccca 216  Q
    |||||||||||||||||| |||||||| ||| ||| ||||||| ||||||||    
T  2075915 gggtatgggacgggtaacgggtatataggtacccaccccgaacccataccca 2075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 14186408 - 14186321
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||  |||| | |||||| ||||||||||||||||| ||||||| | |||||| |||  || || |||| |||||||||||||    
T  14186408 tgggtttgagtttttctcgatttcaaaacacgggtatgggatgggtaacggatatataggtactcaccctgaacccatacccaaaccc 14186321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 222
Target Start/End: Original strand, 2183588 - 2183694
Alignment:
Q  116 tttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcataccc 215  Q
    ||||||||| ||||  |||| |||||||||||| ||||||| |||| ||||||| | ||  |||||  |  ||||| ||| ||| ||||||||||||| |    
T  2183588 tttgactgggtttaggtatgagtttggattttctccgatttcaaaatacgggtacgagagaggtaatggagatatatgtacccaccccgaactcatactc 2183687  T
Q  216 aaaccct 222  Q
    |||||||    
T  2183688 aaaccct 2183694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 8545352 - 8545434
Alignment:
Q  137 gtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    |||||| ||||| ||||||| ||||||||||||||| ||| ||||| || |||||  || ||| ||||||| ||||| |||||    
T  8545352 gtttgggttttctccgatttcaaaacacgggtatggaacgagtaacggggatatagatacccaccccgaacccatactcaaac 8545434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 11255033 - 11255095
Alignment:
Q  159 aaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||||||||||||| ||||||||||||| ||| |||   ||||| |||||||| ||||    
T  11255033 aaacacgggtatgggacggataacaggtatataggtacccactacgaacccatacccataccc 11255095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 219
Target Start/End: Original strand, 30481369 - 30481506
Alignment:
Q  83 ccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaa 181  Q
    ||||||| |||| || ||||||||||||||| ||||||| ||| |||   |||| |||||| |||| || ||||| |||| ||| ||||| |||| ||||    
T  30481369 ccgaaccaaacctaaattgatggattttccctgttttgattgggtttgagtatgagtttgggtttttcctgatttcaaaatacgagtatgagacgagtaa 30481468  T
Q  182 caggtatataagtatccaacccgaactcatacccaaac 219  Q
       | ||||| ||| ||| ||||||| |||||||||||    
T  30481469 tgaggatataggtacccaccccgaacccatacccaaac 30481506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 15173890 - 15173966
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaacc 220  Q
    |||| |||||||| |||| ||||||| |||||||||||  |  ||||| ||||||| | ||||||||||| ||||||    
T  15173890 tttttcccgatttcaaaatacgggtacgggacgggtaaatgagatatatgtatccacctcgaactcatactcaaacc 15173966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 8e-39; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 35074649 - 35074476
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||  ||||||| ||||||||| || || ||||||| ||||||||||| |||   ||||||| ||| ||||    
T  35074649 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaattagacgggttttccccgttttgactgggtttgggtatgggtatgggtttt 35074550  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| | ||||||||||||||||||||||||| |||||||| ||| ||||||||||| |||||||||||||    
T  35074549 ccccgatcttaaaacacgggtatgggacgggtaacgggtatataggtacccaacccgaacccatacccaaaccc 35074476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 7780187 - 7780014
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||||||||||| ||| |||||||| |||||||||| ||||||||||| |||   ||||||| ||| ||||    
T  7780187 catggcaacaaaacccatacccgtggttacccatccgaaccaaactcaatttgacggattttccccgttttgactgggtttgggtatgggtatgggtttt 7780088  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| | |||||||||||||||||||| |||  |||||||| ||| ||| |||||||  ||||||||||||    
T  7780087 ccccgatctcaaaacacgggtatgggacggataatgggtatataggtacccaccccgaacctatacccaaaccc 7780014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 16866348 - 16866175
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | ||| ||||||||||||  ||||||| |||||||||||| || ||||||| ||||||||||| |||   ||||||| ||| ||||    
T  16866348 catggcaacaaaactcatatccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttggttatgggtatgggtttt 16866249  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| | ||||||||||||||||||| ||||| |||||||| ||| ||| ||||||| |||||||||||||    
T  16866248 ccccgatctcaaaacacgggtatgggacgagtaacgggtatataggtacccaccccgaacccatacccaaaccc 16866175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 30650810 - 30650640
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||| |||||||| | ||||||||||||||||  ||||||| |||||||||||| || ||||||| ||||||||||| ||||  ||||||| ||  ||||    
T  30650810 catgtcaacaaaactcatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttaggtatgggtatgagtttt 30650711  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    |||| || | ||||||||||||||||||||||||| |||||||| ||| ||| ||||||| ||||||||||    
T  30650710 ccccaatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaa 30650640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 49 - 216
Target Start/End: Complemental strand, 10072645 - 10072477
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||| ||||||||  ||||||| |||||||||||| || ||||||| ||||||||||| |||   ||||||| ||| ||||    
T  10072645 catggcaacaaaacccatacccgcggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggtttt 10072546  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcataccca 216  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||| ||| ||| ||||||| ||||||||    
T  10072545 ccccgatttcaaaacacgggtatggaacgggtaacgggtatataggtacccaccccgaacccataccca 10072477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 221
Target Start/End: Complemental strand, 12980557 - 12980383
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggattt 146  Q
    |||||||||||||| | ||||||||||||||||    ||||| ||| |||||| | || |||||||  |||||||||| |||   ||||||||| | |||    
T  12980557 acatggcaacaaaactcatacccgtggttacccgctagaaccaaactcaatttaacgggttttccccattttgactgggtttgggtatgggttttggttt 12980458  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||||| ||||||||||||||||||||||||  |||||||||||| ||| ||||||| |||||||||||||    
T  12980457 tccccgatttcaaaacacgggtatgggacgggtaatgggtatataagtacccaccccgaacccatacccaaaccc 12980383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 17885644 - 17885471
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   |||||||||||||||   ||||||| |||||||||||| || ||||||| ||||||||||| |||  |||||||| ||| ||||    
T  17885644 catggcaacaaaacccatacccgtggttacctgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgaatatgggtatgggtttt 17885545  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaa-cccgaactcatacccaaaccc 221  Q
    ||||||||| |||||| |||||||||||||||||| |||||||| || ||||| ||||||| |||||||| ||||    
T  17885544 ccccgattttaaaacatgggtatgggacgggtaacgggtatataggt-tccaaccccgaacccatacccataccc 17885471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 3226860 - 3227025
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcc-cgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||||  ||||  | |||||||| |||||||| |||||||||||| ||||||||| |||||| ||||  |||   ||||||| ||| ||||    
T  3226860 catggcaacaaaatccatacatgcggttacccgtccgaaccaaacccaatttgacggattttcctcgttttaactgagtttgagtatgggtatgggtttt 3226959  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| ||||||| |||||    
T  3226960 ccccgatttcaaaacacgggtatgggacgggtaacaggaatataggtacccaccccgaacccatac 3227025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 21702838 - 21702665
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||| ||||||||||||  ||||||| |||||||||||| ||||||| |||||||||||||| |||   |||| || ||| ||||    
T  21702838 catggcaacaaaacccatatccgtggttacccgcccgaaccaaacccaatttgacggatttttcccgttttgactgggtttgggtatgagtatgggtttt 21702739  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| |  |||||||||||||||||||||||| |||||||| ||| ||| ||||||| ||||||| |||||    
T  21702738 ccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccccaaccc 21702665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 221
Target Start/End: Original strand, 38139730 - 38139879
Alignment:
Q  73 ggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatg 171  Q
    ||||||||  ||||||| ||||||||||||||||||||||| ||||||||||| |||  |||||||| ||| |||||||| |||| |||||||| |||||    
T  38139730 ggttacccgcccgaaccaaacccaatttgatggattttccccgttttgactgggtttggatatgggtatgggttttccccaatttcaaaacacgagtatg 38139829  T
Q  172 ggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||||   ||||||||||| ||| ||||||| |||| ||||||||    
T  38139830 ggacgggtaatgagtatataagtacccaccccgaacccataaccaaaccc 38139879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 38153065 - 38152893
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttc 148  Q
    |||||||||||||  |||||||  ||||||||  ||||||| ||| |||||||| ||||||||||||||||||||| |||   ||||||| ||| |||||    
T  38153065 catggcaacaaaaactatacccacggttacccgcccgaaccaaactcaatttgacggattttcccgttttgactgggtttgggtatgggtatgggttttc 38152966  T
Q  149 cccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||| |||||| |||||||| |||| |||| | |||||| ||| ||| ||||||| |||||| ||||||    
T  38152965 cccgatttcaaaacatgggtatggaacggataacggctatataggtacccaccccgaacccatacctaaaccc 38152893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 17852031 - 17851860
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||  ||||||||||  ||||||| ||||||||||||||||||||| ||||||||||||| |||   ||||||| ||| ||||    
T  17852031 catggcaacaaaacccatacttgtggttacccgcccgaaccaaacccaatttgatggattttctccgttttgactgggtttgggtatgggtatgggtttt 17851932  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| | ||  ||||||||||||||||||||| | |||||| ||| ||| ||||||| |||||||||||||    
T  17851931 ccccgatcttaa--cacgggtatgggacgggtaacggatatataggtacccatcccgaacccatacccaaaccc 17851860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 27850246 - 27850413
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | ||| ||||||||||||  ||||||| |||||||||||| || ||||||| ||||||| ||| |||      |||| ||| ||||    
T  27850246 catggcaacaaaactcatatccgtggttacccgcccgaaccaaacccaatttgacggtttttccccgttttgattgggttt------gggtatgggtttt 27850339  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||| ||||||||||||||||||||||||| ||| |||| ||| ||| ||||||| |||||||||||||    
T  27850340 ccccgatttcaaaacacgggtatgggacgggtaacgggtgtataggtacccatcccgaacccatacccaaaccc 27850413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 45380261 - 45380115
Alignment:
Q  73 ggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgg 172  Q
    |||||||| |||||||| |||||||||||| || ||| || ||||||||||| |||  |||||||| ||| |||| |||||||| |||| ||||||||||    
T  45380261 ggttacccgtccgaaccaaacccaatttgacggttttccctgttttgactgggtttggatatgggtatgggtttttcccgatttcaaaatacgggtatgg 45380162  T
Q  173 gacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    |||||||||| |||||||| ||| ||| ||||||| |||||| ||||    
T  45380161 gacgggtaacgggtatataggtacccaccccgaacccatacctaaac 45380115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 18125142 - 18125315
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||| |||||||||| ||| |||||||||| |  ||||||| || ||||||||| || ||||||| ||||||||||| ||| | |||| || ||| ||||    
T  18125142 catgacaacaaaattcatatccgtggttactcgcccgaaccaaatccaatttgacgggttttccccgttttgactgggtttgtgtatgagtatgggtttt 18125241  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
     |||||| |  |||||||||||||||||||||||| |||||||| ||| ||| ||||||| |||||||||||||    
T  18125242 tcccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacgcatacccaaaccc 18125315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 216
Target Start/End: Complemental strand, 39317174 - 39317006
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||||| |||| || ||||| ||  ||||||| ||| |||||||| || ||||||| ||||||||||| |||  ||||| || ||  ||||    
T  39317174 catggcaacaaaattcatactcgcggttatccgcccgaaccaaactcaatttgacgggttttccccgttttgactgggtttggatatgagtatgagtttt 39317075  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcataccca 216  Q
    || |||||| ||||||||||||||||||||||| | |||||||| ||||||| || |||||||||||||    
T  39317074 cctcgatttcaaaacacgggtatgggacgggtagcgggtatatatgtatccatcctgaactcataccca 39317006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 24753342 - 24753200
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   |||||||||||||||| |||||||| ||  |||||||| |||||||| ||||||||||||| |||  |||||||| ||| ||||    
T  24753342 catggcaacaaaacccatacccgtggttacccgtccgaaccaaattcaatttgacggattttctccgttttgactgggtttggatatgggtatgggtttt 24753243  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatata 191  Q
    ||| ||| | ||||||||||||||||||||||||| ||||||||    
T  24753242 ccc-gatctcaaaacacgggtatgggacgggtaacgggtatata 24753200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 45885679 - 45885845
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||   |||||| |||||||||| | || ||||| ||||||||||||| |||   ||||||| ||  ||||    
T  45885679 catggcaacaaaacccatacccgtggttacccgctcgaaccaaacccaatttaacgggttttctccgttttgactgggtttgggtatgggtatgagtttt 45885778  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacc 214  Q
    ||||||| | |||||||||||||||||||||||||| ||||||| ||| ||| ||||||| ||||||    
T  45885779 ccccgatctcaaaacacgggtatgggacgggtaacaagtatataggtacccaccccgaacccatacc 45885845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 18825780 - 18825959
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatata------tgggtttg 141  Q
    |||||||||||||   |||||| |||||| || |||||||| |||||||||||| || ||||||| ||||||||||| |||   |       ||||||||    
T  18825780 catggcaacaaaacccatacccatggttaaccgtccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtgagggtgtgggtttg 18825879  T
Q  142 gattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    | ||||||||||||| ||||||||||||||||||||||||| |||||||| ||| ||| ||||||| | |||||||||||    
T  18825880 ggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccgtacccaaaccc 18825959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 5377264 - 5377094
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    |||| ||| |||||| ||||||||||||||| ||| ||||| || | ||||| | ||||||| |||||||||| |||  ||   |||| |||||| ||||    
T  5377264 catgacaataaaattcatacccgtggttacctatctgaaccaaatctaatttaacggatttttcccgttttgattggggttgagtatgagtttgggtttt 5377165  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    ||||||||| ||||||| ||||||||||||||||  |||||||| ||| ||| ||||||| ||||||||||    
T  5377164 ccccgatttcaaaacacaggtatgggacgggtaaagggtatataggtacccaccccgaacccatacccaaa 5377094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 43507624 - 43507481
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||| |||||| ||| ||| |||||||| || ||||| ||||||||||||||| |||| |||||||||||||| |||   |||  || ||| ||||    
T  43507624 catggcaataaaattcatatccgcggttacccgtctgaaccaaacccaatttgatgggttttccccgttttgactgggtttgggtataagtatgggtttt 43507525  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatata 191  Q
    ||||||||| |||||| ||||||| |||||||||| ||||||||    
T  43507524 ccccgatttcaaaacatgggtatgagacgggtaacgggtatata 43507481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 31426099 - 31426013
Alignment:
Q  136 ggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||||| || ||||| ||||||| ||||||| ||||||||||||||    
T  31426099 ggtttgggttttccccgatttaaaaatacgggtatgagacgggtaacggggatatatgtatccaccccgaacgcatacccaaaccct 31426013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 41103828 - 41103670
Alignment:
Q  50 atggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggattttc 148  Q
    |||||||||||| | ||||| ||||||||||   |||||| || || |||||| ||||||| |||||||||||||| | |      |||| ||| |||||    
T  41103828 atggcaacaaaactcatacctgtggttacccgcgcgaaccaaatccgatttgacggatttttcccgttttgactgggtgt------gggtatgggttttc 41103735  T
Q  149 cccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||| ||| ||||||| |||||    
T  41103734 cccgatttcaaaacacgggtatgggacggttaacgggtatataagtacccaccccgaacccatac 41103670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 218
Target Start/End: Complemental strand, 3920680 - 3920547
Alignment:
Q  74 gttacccatccgaaccgaacccaatttgat-ggattttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgg 172  Q
    |||||||| ||||||| ||||||||||||| || |||||||||||||||            ||||||||| ||||||||||||| ||||||| |||||||    
T  3920680 gttacccacccgaaccaaacccaatttgatgggtttttcccgttttgac------------tgggtttgggttttccccgatttcaaaacactggtatgg 3920593  T
Q  173 gacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    ||||| ||||||||||||| ||| ||| ||||||| ||||||||||    
T  3920592 gacggataacaggtatataggtacccaccccgaacccatacccaaa 3920547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 219
Target Start/End: Complemental strand, 25905807 - 25905637
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgtttt-gactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||   |||||  ||||||||||||  | ||||||| |||| |||||| |||   ||||||| ||| ||||    
T  25905807 catggcaacaaaacccatacccgtggttacccgctcgaactaaacccaatttgacaggttttcccctttttgactgggtttgggtatgggtatgggtttt 25905708  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    |||| || | ||||||| ||||||||||||||||| |||| ||| ||| ||| |||||||||||||||||||    
T  25905707 ccccaatctcaaaacacaggtatgggacgggtaacgggtacataggta-ccaccccgaactcatacccaaac 25905637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 207
Target Start/End: Original strand, 39455953 - 39456088
Alignment:
Q  73 ggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatg 171  Q
    ||||||||  ||||||| |||||||||||| |  ||||||| ||||||||||| |||   ||||| | ||| ||||||||||||| |||||| |||||||    
T  39455953 ggttacccgcccgaaccaaacccaatttgacgagttttccccgttttgactgggtttgggtatggatatgggttttccccgatttcaaaacatgggtatg 39456052  T
Q  172 ggacgggtaacaggtatataagtatccaacccgaac 207  Q
    ||||||||||| |||||||| ||| ||| |||||||    
T  39456053 ggacgggtaacgggtatataggtacccaccccgaac 39456088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 18684069 - 18683979
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    |||||||| || ||||||||||||| |||| ||||||| ||||||||||||||| ||||| ||||||| | ||||| ||||||||||||||    
T  18684069 tatgggttcgggttttccccgatttcaaaatacgggtacgggacgggtaacagggatatatgtatccacctcgaacccatacccaaaccct 18683979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 26004400 - 26004554
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgat-ggattttcccgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | ||||||||||||||||  ||||||| ||| ||||||||| || |||||||||||||||            ||||||||| ||||    
T  26004400 catggcaacaaaactcatacccgtggttacccgcccgaaccaaacacaatttgatgggtttttcccgttttgac------------tgggtttgggtttt 26004487  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacc 214  Q
    || |||||| |||||  |||||||||||||||||||||||||||  || ||| ||||||| ||||||    
T  26004488 cctcgatttcaaaacttgggtatgggacgggtaacaggtatatagatacccaccccgaacccatacc 26004554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 26623044 - 26622959
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    ||||||||| ||||||| ||||| ||||||||||||||||| ||||||  |||||||||||| ||| ||||||| |||||||||||    
T  26623044 tgggtttgggttttccctgatttcaaaacacgggtatgggatgggtaatgggtatataagtacccaccccgaacccatacccaaac 26622959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 32546287 - 32546197
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    |||||||||||||||| |||||||| |||| ||||||| || ||||||||| || ||||| ||| ||| ||||||| ||||||||||||||    
T  32546287 tatgggtttggatttttcccgatttcaaaatacgggtacggaacgggtaacggggatatatgtacccaccccgaacccatacccaaaccct 32546197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 2630572 - 2630660
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||||| ||||||||||||||||| || ||||||||||||||| || ||||||||  || ||| ||||||| |||||||||||||    
T  2630572 tatgggtttgggttttccccgatttaaaa-catgggtatgggacgggtgacgggtatatagatacccaccccgaacccatacccaaaccc 2630660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 44734273 - 44734436
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttc 148  Q
    ||||||||||||| | |||| || ||||||||  ||||||| |||||||||||| || ||||||| |||||||||| |||    ||| || ||  ||||     
T  44734273 catggcaacaaaactcatactcgcggttacccgcccgaaccaaacccaatttgacgggttttccc-ttttgactgggtttgggaatgtgtatgtgttttt 44734371  T
Q  149 cccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
    | |||||| |||||||||||||||||| |||||  |||||||| ||| ||| ||||||| |||||    
T  44734372 ctcgatttcaaaacacgggtatgggaccggtaatgggtatataggtacccaccccgaacccatac 44734436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 27063454 - 27063339
Alignment:
Q  107 ttttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaa 206  Q
    |||||||  ||||||||| |||   ||||||| | | ||||||||||||||| || ||||||| |||||||||||| || ||||| ||| ||| ||||||    
T  27063454 ttttcccaatttgactgggtttgggtatgggtctcggttttccccgatttaataatacgggtacgggacgggtaacgggaatatatgtacccaccccgaa 27063355  T
Q  207 ctcatacccaaaccct 222  Q
    ||||||||| ||||||    
T  27063354 ctcataccccaaccct 27063339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 28309583 - 28309497
Alignment:
Q  136 ggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    ||||||| || |||| ||||| |||| ||||||| |||||||||||| || ||||| ||||| | ||||||||||||||||||||||    
T  28309583 ggtttgggttctccctgatttcaaaatacgggtacgggacgggtaacgggaatatatgtatctaccccgaactcatacccaaaccct 28309497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 45708785 - 45708952
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcc-cgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | |||  |||| ||| ||  ||||| | || |||||||||| |||||||| |||||||||||| |||   |||||||||      |    
T  45708785 catggcaacaaaactcatatacgtgattatccgcccgaatcaaatccaatttgatagattttcctcgttttgactgggttttggtatgggttt------t 45708878  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    | ||||| | ||||||||||||| ||||||||||| |||||||| ||| ||| |||||||||||||| ||||||    
T  45708879 ctccgatctcaaaacacgggtattggacgggtaacgggtatataggtacccaccccgaactcatacctaaaccc 45708952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 10995832 - 10995921
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||| |||||| ||||||||||||| || |||||||||||||||||||||||||  ||||  || ||| ||||||| |||||||| ||||    
T  10995832 tatgagtttgggttttccccgatttcaagacacgggtatgggacgggtaacagggttatatatacccaccccgaacccatacccataccc 10995921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 215
Target Start/End: Complemental strand, 37218184 - 37218016
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    |||| |||||||| | ||||| | || |||||| ||||||| ||| ||||||||||| |||| |||||||||||||| |||   |||| |||||  ||||    
T  37218184 catgacaacaaaactcataccagcggatacccacccgaaccaaactcaatttgatgggttttccccgttttgactgggtttgggtatgagtttgagtttt 37218085  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaac-aggtatataagtatccaacccgaactcataccc 215  Q
      || |||| ||||||| |||| ||||||||||||  || ||||||||| | | |||||||||||||||    
T  37218084 atcctatttcaaaacacaggtacgggacgggtaacgggggatataagtaccaagcccgaactcataccc 37218016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 218
Target Start/End: Complemental strand, 37579424 - 37579271
Alignment:
Q  65 atacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaaca 163  Q
    |||| |||||||||||  ||||||| ||||||||| || || ||||||| ||||||||| | |||   |||||||||||||||| ||||||||  |||||    
T  37579424 atacgcgtggttacccgcccgaaccaaacccaattagacgggttttccccgttttgactaggtttgggtatgggtttggatttttcccgatttcgaaaca 37579325  T
Q  164 cgggtatggg-acgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    |||  ||||| | ||||||| |||||||| ||| ||| |||||||  |||||||||    
T  37579324 cgg--atgggtaagggtaacgggtatataggtacccaccccgaacctatacccaaa 37579271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 188
Target Start/End: Original strand, 41741388 - 41741504
Alignment:
Q  73 ggttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatg 171  Q
    ||||||||  ||||||| ||||||||||||||  |||||||  |||| |||||||||   |||| || ||| ||||||||||||| ||||||||||||||    
T  41741388 ggttacccgcccgaaccaaacccaatttgatgagttttccccatttttactggatttgggtatgagtatgggttttccccgatttcaaaacacgggtatg 41741487  T
Q  172 ggacgggtaacaggtat 188  Q
     ||||| |||| |||||    
T  41741488 agacggataacgggtat 41741504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 25979927 - 25980006
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccctt 223  Q
    ||||||||||||| ||||||| |||||| |||||||||| | |||||| ||| ||| ||| |||||||||||||| ||||    
T  25979927 ttttccccgatttcaaaacacaggtatgagacgggtaacggatatatatgtacccaccccaaactcatacccaaatcctt 25980006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 10990859 - 10990941
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacc 214  Q
    |||||||| || ||||||||||||| |||| ||||||| ||||||||||| ||| ||||| ||||||| || ||| |||||||    
T  10990859 tatgggttgggtttttccccgatttcaaaatacgggtacgggacgggtaatagggatataggtatccaccctgaattcatacc 10990941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 24425547 - 24425416
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | |||| ||||||||||   ||||||| |||||||||||| |||||||| ||||||||| |||            ||||| |||||    
T  24425547 catggcaacaaaactcatacacgtggttaccagcccgaaccaaacccaatttgacggattttctccgttttgattgg------------gtttgaatttt 24425460  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatata 191  Q
    | | ||||| ||||||||||||||||||||||||| ||||||||    
T  24425459 ctctgatttcaaaacacgggtatgggacgggtaacgggtatata 24425416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 37182451 - 37182310
Alignment:
Q  51 tggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttcc 149  Q
    |||||||||||   ||| ||| ||||||||  ||||| | ||| |||||||| || ||||||| ||||||||||| |||   |||| || ||| |||||     
T  37182451 tggcaacaaaacccatatccgcggttacccgcccgaatcaaactcaatttgacgggttttccccgttttgactgggtttgggtatgagtatgggttttct 37182352  T
Q  150 ccgatttaaaaacacgggtatgggacgggtaacaggtatata 191  Q
    |||| || ||||||||||||||||||||||| | ||||||||    
T  37182351 ccgaattcaaaacacgggtatgggacgggtagcgggtatata 37182310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 37195923 - 37196044
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||| |||||||||  ||||||||||||| ||  || |||| ||| |||||||| |||||||||| ||||||| | | |||   ||||||| ||||||||    
T  37195923 catgacaacaaaatccatacccgtggttatccgcccaaaccaaactcaatttgacggattttccctgttttgattaggtttgggtatgggtatggatttt 37196022  T
Q  148 ccccgatttaaaaacacgggta 169  Q
    ||||||||| ||||||| ||||    
T  37196023 ccccgatttcaaaacacaggta 37196044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 46127182 - 46127270
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||||||  |||||| ||||||||| |||||||||||||||| |||||||| |||| ||| |||  |||| ||||||| |||||||    
T  46127182 tatgggtttggggtttccc-gatttaaaatcacgggtatgggacggataacaggtgtataggtacccacaccgatctcatactcaaaccc 46127270  T

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Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 22973504 - 22973393
Alignment:
Q  111 cccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactca 210  Q
    |||| ||||||||| |||   ||||||||||| |||||| |||||| |||| ||||||| |||||||||||  || ||||  ||| ||| | ||||| ||    
T  22973504 cccgatttgactgggtttgggtatgggtttgggttttccacgatttcaaaatacgggtacgggacgggtaatggggatatctgtacccacctcgaaccca 22973405  T
Q  211 tacccaaaccct 222  Q
    ||||||||||||    
T  22973404 tacccaaaccct 22973393  T

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Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 33841161 - 33841122
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaaca 183  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  33841161 ttttccccgatttcaaaacacgggtatgggacgggtaaca 33841122  T

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Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 3157227 - 3157089
Alignment:
Q  83 ccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaac 182  Q
    ||||||| |||| ||||||  || ||| |||| ||||||| | |||   ||||||||| | ||||||||||||| |||| | ||||||||||||| ||||    
T  3157227 ccgaaccaaacctaatttgtcggttttccccgctttgacttggtttgggtatgggtttaggttttccccgatttcaaaatatgggtatgggacggataac 3157128  T
Q  183 aggtatataagtatccaacccgaactcatacccaaaccc 221  Q
     || ||||| ||| |||  ||||||  ||||||||||||    
T  3157127 ggggatataggtacccacaccgaacctatacccaaaccc 3157089  T

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Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 16079103 - 16079049
Alignment:
Q  137 gtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatata 191  Q
    |||||| ||||| ||||| | ||||||||||||||||||||||||| ||||||||    
T  16079103 gtttgggttttctccgatctcaaaacacgggtatgggacgggtaacgggtatata 16079049  T

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Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 27063269 - 27063143
Alignment:
Q  97 atttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagta 195  Q
    |||||| |||||||||| | ||||||||| |||   |||| |||||  |||||| |||||| |||| |||||||  |||||| |||| || ||||| |||    
T  27063269 atttgacggattttccctgatttgactgggtttgggtatgagtttgagttttcctcgatttcaaaatacgggtacaggacggataacggggatatatgta 27063170  T
Q  196 tccaacccgaactcatacccaaaccct 222  Q
      || ||||||||||||||||||||||    
T  27063169 ctcaccccgaactcatacccaaaccct 27063143  T

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Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 218
Target Start/End: Complemental strand, 16811819 - 16811739
Alignment:
Q  137 gtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    |||||||||||||||||| | |||||||||||||| ||||| |||  ||||||||  || || |||||||| ||||||||||    
T  16811819 gtttggattttccccgatctcaaaacacgggtatgagacggataatgggtatatagata-cccacccgaacccatacccaaa 16811739  T

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Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 25782910 - 25782987
Alignment:
Q  137 gtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacc 214  Q
    |||||| ||||| ||||||  |||||||||||||| ||||| |||  |||||||| ||| ||| ||||||||||||||    
T  25782910 gtttgggttttctccgattataaaacacgggtatgagacggataatgggtatataggtacccaccccgaactcatacc 25782987  T

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Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 27896473 - 27896562
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||||| |||||||  |||| |||||| |||||||||||||||||| ||  |||| | | | | |||||||||||||||| ||||    
T  27896473 tatgggtttgggttttcccttatttcaaaacatgggtatgggacgggtaacggggttatatgcaccaaccccgaactcatacccataccc 27896562  T

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Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 30839144 - 30839220
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaacc 220  Q
    ||||||| ||||| |||| |||||||||||||| |||||  | ||||| ||||| | ||||||||||| ||||||||    
T  30839144 ttttccctgatttcaaaatacgggtatgggacgagtaacgtggatatatgtatctaccccgaactcatgcccaaacc 30839220  T

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Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 21750874 - 21750787
Alignment:
Q  135 gggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    |||||| | |||| |||||||| |||| |||| |||| ||||||| || || ||||| ||| ||| | ||||||||||||||||||||    
T  21750874 gggtttaggtttttcccgatttcaaaatacggatatgagacgggtgacggggatatatgtacccacctcgaactcatacccaaaccct 21750787  T

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Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 23475263 - 23475350
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||| |||| |||||||| ||||||||||| ||||| ||||||  || ||||| ||| |||   ||||| |||||||||||||    
T  23475263 tgggtttgggtttttcccgatttcaaaacacgggtttgggatgggtaatggggatatatgtacccacttcgaacccatacccaaaccc 23475350  T

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Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 170
Target Start/End: Original strand, 44658397 - 44658503
Alignment:
Q  65 atacccgtggttacccatccgaaccgaacccaatttgatggattttcc-cgttttgactggatttatatatgggtttggattttccccgatttaaaaaca 163  Q
    ||||||| |||||||   ||||||| || ||||||||| || |||||| |||||||||||| |||   ||||||| ||  |||| |||||||| ||||||    
T  44658397 atacccgcggttacctgcccgaaccaaatccaatttgacgggttttcctcgttttgactgggtttgggtatgggtatgagtttttcccgatttcaaaaca 44658496  T
Q  164 cgggtat 170  Q
    |||||||    
T  44658497 cgggtat 44658503  T

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Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 29157446 - 29157354
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaaca--cgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    ||||| ||||||||||||||||||| | || |  |||||||| |||||||||| || ||||| ||||||| ||  ||| | ||||||||||||    
T  29157446 tatggttttggattttccccgatttcataatatacgggtatgagacgggtaacggggatatatgtatccaccctaaacccgtacccaaaccct 29157354  T

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Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 29292797 - 29292748
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaaca 183  Q
    ||||| ||||||||||||||||| |||||||||||| | || ||||||||    
T  29292797 tgggtatggattttccccgatttcaaaacacgggtacgagatgggtaaca 29292748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 42908039 - 42908088
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaa 181  Q
    |||| |||||| ||||||||||||| |||| ||||||| |||||||||||    
T  42908039 tatgagtttgggttttccccgatttcaaaatacgggtacgggacgggtaa 42908088  T

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Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 169
Target Start/End: Original strand, 44985836 - 44985952
Alignment:
Q  53 gcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggattttcccc 151  Q
    ||||||||| | |||| || ||||||||||||||||| || | ||||||| |||||||| ||||||||| ||| |||   ||||| | ||| ||||| ||    
T  44985836 gcaacaaaactcatactcgcggttacccatccgaaccaaatctaatttgacggattttctccgttttgattgggtttgggtatggatatgggttttctcc 44985935  T
Q  152 gatttaaaaacacgggta 169  Q
    |||||  |||||||||||    
T  44985936 gattt-caaacacgggta 44985952  T

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Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 5565269 - 5565389
Alignment:
Q  97 atttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagta 195  Q
    |||||| |||||||||| | |||||||||||||   ||| ||||||| ||||||| ||||| |||  |||| ||||||| ||||||| ||  |||| |||    
T  5565269 atttgacggattttccccgctttgactggatttggttataggtttgggttttccctgatttcaaagtacggatatgggatgggtaacggggttatatgta 5565368  T
Q  196 tccaacccgaactcataccca 216  Q
     ||| ||| ||| ||||||||    
T  5565369 cccacccctaacccataccca 5565389  T

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Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 29284510 - 29284337
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | ||||||||||||||||  ||||||| |||||||||||| || ||||| ||||||||||||| |||   ||||||| ||| ||||    
T  29284510 catggcaacaaaactcatacccgtggttacccgcccgaaccaaacccaatttgacgggttttctccgttttgactgggtttgggtatgggtatgggtttt 29284411  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
     |||||| |  |||||||||||||||||||||||| |||||||| ||| ||| ||||||| |||||||||||||    
T  29284410 tcccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccagcccgaacccatacccaaaccc 29284337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 39655187 - 39655360
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||  ||||||| |||||||||||| || ||||||| ||||||| ||| |||   ||||||| ||| ||||    
T  39655187 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgattgggtttgggtatgggtatgggtttt 39655286  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| | |||||||||||||||||||||||||||||||||| ||| ||| ||| ||| |||||||||||||    
T  39655287 ccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaacccatacccaaaccc 39655360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 42758548 - 42758375
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||  |||| || |||||||||||| |||||||||| ||||| ||||| |||   |||| |||||| |||     
T  42758548 catggcaacaaaacccatacccgtggttacccgcccgatccaaacccaatttgacggattttccccgttttaactgggtttgggtatgagtttgggtttc 42758449  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||| ||||||| |||||||||||||||||||||||||| |||| || ||||||| |||||||||||||    
T  42758448 ccccgatttcaaaacacaggtatgggacgggtaacaggtatataggtatgcaccccgaacccatacccaaaccc 42758375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 44252921 - 44252748
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||||  |||||||||||||||| |||||| | |||| ||||||| || ||||||| ||||||||||| |||   ||||||| ||| ||||    
T  44252921 catggcaacaaaatccatacccgtggttacccgtccgaatcaaaccaaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggtttt 44252822  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| |  |||||||||||||||||| |||||||||||||| ||| ||| ||||||| |||||||||||||    
T  44252821 ccccgatctcgaaacacgggtatgggacgtgtaacaggtatataggtacccaccccgaacccatacccaaaccc 44252748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 44953349 - 44953522
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||||| ||||||||||||||||   |||||| |||||||||||| || ||||||| ||||||||||| |||   | ||||| ||| ||||    
T  44953349 catggcaacaaaattcatacccgtggttacccgctcgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtttgggtatgggtttt 44953448  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| | ||||||||||||||||||||||||| |||||||| |||  || ||||||||||||| |||||||    
T  44953449 ccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtactcaccccgaactcatactcaaaccc 44953522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 4557219 - 4557389
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    |||| |||||||| | ||||||||||||||||| ||||||  |||||||||||| || |||| |||||||||||||| |||   ||||||||||| ||||    
T  4557219 catgacaacaaaactcatacccgtggttacccacccgaacaaaacccaatttgacgggtttttcccgttttgactgggtttgggtatgggtttgggtttt 4557318  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    ||||| ||| |||||| ||||||||||||||||||  ||||||| ||| ||| ||||||| ||||||||||    
T  4557319 ccccgttttcaaaacatgggtatgggacgggtaacgagtatataggtacccaccccgaacccatacccaaa 4557389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 34026128 - 34025955
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||| ||||||||  ||||||| || ||||||||| || |||| |||||||||||||| |||  |||||||| ||| ||||    
T  34026128 catggcaacaaaacccatacccgcggttaccctcccgaaccaaaaccaatttgacggttttttcccgttttgactgggtttggatatgggtatgggtttt 34026029  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||| ||||||| |||||||||||||||||  ||||||| || |||| |||||||||||||||| ||||    
T  34026028 ccccgatttcaaaacacaggtatgggacgggtaacgagtatataggtttccaccccgaactcatacccataccc 34025955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 7469692 - 7469865
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||  ||||||| |||||||||||| || ||||||| ||||||||||| |||   ||||||| ||| ||||    
T  7469692 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggtttt 7469791  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||| ||| |  |||||||||||||||||||||||| |||||||| ||| ||| ||||||| ||||| |||||||    
T  7469792 ccctgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacacaaaccc 7469865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 39728845 - 39728672
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   |||||||||||||||| |||||||| || ||||||||| |||||||||| ||||||||||| |||   |||| || | | ||||    
T  39728845 catggcaacaaaacccatacccgtggttacccgtccgaaccaaatccaatttgacggattttccccgttttgactgggtttgggtatgagtataggtttt 39728746  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    || |||| | |||| |||||||||||| ||||||| |||||||||||| ||| ||||||| |||||||||||||    
T  39728745 cctcgatctcaaaatacgggtatgggatgggtaacgggtatataagtacccaccccgaacccatacccaaaccc 39728672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 44639448 - 44639275
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttga-tggattttcccgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | ||| |||||||||||| |||||||  |||||||||||| ||| ||| ||| |||||||||| |||   ||||||| ||| ||||    
T  44639448 catggcaacaaaactcatatccgtggttacccgtccgaacgaaacccaatttgactggttttccccattttgactgggtttgggtatgggtatgggtttt 44639349  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||  || | ||||||||||||||||||||||||| |||||||| ||| ||| ||||||| |||||||||||||    
T  44639348 cccatatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 44639275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 48390731 - 48390904
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||| |||||||| | |||||| || ||||||||| |||||||||| ||||||||||| |||   ||||||| ||| ||||    
T  48390731 catggcaacaaaacccatacccgcggttacccgttcgaaccaaatccaatttgacggattttccccgttttgactgggtttgggtatgggtatgggtttt 48390830  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||| ||||||||||||||||||||||||| || ||||| ||| ||| || |||| |||||||| ||||    
T  48390831 ccccgatttcaaaacacgggtatgggacgggtaacgggaatataggtacccatcctgaacccatacccataccc 48390904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 219
Target Start/End: Original strand, 4015958 - 4016129
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||| ||||||  ||| |||||||| || |||| |||||||||||| | |||   ||||||||||| ||||    
T  4015958 catggcaacaaaacccatacccgtggttacccacccgaacgaaactcaatttgacgggtttttcccgttttgactaggtttgggtatgggtttgggtttt 4016057  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    ||||||||| |||||| ||||||||||||| |||| |||||||| ||| |||  |||||| |||||||||||    
T  4016058 ccccgatttcaaaacatgggtatgggacggataacgggtatataggtacccactccgaacccatacccaaac 4016129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 54317318 - 54317145
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||||  ||| ||||||||||||  ||||||| || ||||||||| || ||||||| ||||||||||| |||   |||| |||||  ||||    
T  54317318 catggcaacaaaatccatatccgtggttacccgcccgaaccaaatccaatttgacgggttttccccgttttgactgggtttgagtatgtgtttgagtttt 54317219  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||| |||||||  |||| ||||||||||| |||||||| ||| ||| ||||||| ||| |||||||||    
T  54317218 ccccgatttcaaaacacaagtataggacgggtaacgggtatataggtacccaccccgaacccattcccaaaccc 54317145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 221
Target Start/End: Complemental strand, 44172733 - 44172627
Alignment:
Q  115 ttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacc 214  Q
    |||||||||| |||   ||||||| ||| ||||||||||| | ||||||||||||||||||||||||| |||||||||||| ||| ||||||| ||||||    
T  44172733 ttttgactgggtttgagtatgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacc 44172634  T
Q  215 caaaccc 221  Q
    |||||||    
T  44172633 caaaccc 44172627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 221
Target Start/End: Complemental strand, 44179433 - 44179327
Alignment:
Q  115 ttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacc 214  Q
    |||||||||| |||   ||||||| ||| ||||||||||| | ||||||||||||||||||||||||| |||||||||||| ||| ||||||| ||||||    
T  44179433 ttttgactgggtttgagtatgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacc 44179334  T
Q  215 caaaccc 221  Q
    |||||||    
T  44179333 caaaccc 44179327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 65 - 221
Target Start/End: Complemental strand, 49580222 - 49580065
Alignment:
Q  65 atacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaaca 163  Q
    ||||||||||||| ||  ||||||| || ||||||||| || ||||||| ||||||||||| |||   ||||||| ||| ||||||||||| | ||||||    
T  49580222 atacccgtggttatccgcccgaaccaaatccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttttccccgatctcaaaaca 49580123  T
Q  164 cgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||||||||||||||  ||||||| ||| ||| | ||||| ||||| |||||||    
T  49580122 cgggtatgggacgggtaacgagtatataggtacccacctcgaacccatactcaaaccc 49580065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 221
Target Start/End: Original strand, 48305554 - 48305728
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggattt 146  Q
    ||||| |||||||||  ||||||| ||||||||| ||||||| |||||||| ||| || |||||||  |||||||||| |||   ||||||| ||  |||    
T  48305554 acatgacaacaaaatccatacccgcggttacccacccgaaccaaacccaatctgacgggttttccccattttgactgggtttggttatgggtatgagttt 48305653  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||| |||| ||||||||||||||| ||| ||| | |||||||| ||| ||| |||||||  ||||||||||||    
T  48305654 tccccaatttcaaaacacgggtatggaacgagtatcgggtatataggtacccaccccgaacctatacccaaaccc 48305728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 219
Target Start/End: Original strand, 23546862 - 23547027
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||    ||||| |||||||||| | || ||||||| ||||||||||| |||      |||| ||| ||||    
T  23546862 catggcaacaaaacccatacccgtggttacccgcatgaaccaaacccaatttaacgggttttccccgttttgactgggttt------gggtatgggtttt 23546955  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    ||||||| |  |||||||||||||||||||||||| |||||||| ||| ||| ||||||| |||||||||||    
T  23546956 ccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaac 23547027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 221
Target Start/End: Complemental strand, 49025841 - 49025682
Alignment:
Q  50 atggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttc 148  Q
    |||||||||||||  ||||||||||||||||  | ||||| ||||||||||||||| |||| || |||||||||||            |||||| |||||    
T  49025841 atggcaacaaaatccatacccgtggttacccgcctgaaccaaacccaatttgatgggtttttcctgttttgactgg------------gtttgggttttc 49025754  T
Q  149 cccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||| | |||||||||||||||||||||||||||||||||| ||| |  | |||||| |||||||||||||    
T  49025753 cccgatctcaaaacacgggtatgggacgggtaacaggtatataggta-cacatccgaacccatacccaaaccc 49025682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 49 - 189
Target Start/End: Original strand, 22535755 - 22535896
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||| ||||| ||  ||||||| ||| ||||||||||| ||||||| ||||||||||| |||   ||||||| ||  ||||    
T  22535755 catggcaacaaaacccatacccgcggttatccgcccgaaccaaactcaatttgatgggttttccccgttttgactgggtttgggtatgggtatgagtttt 22535854  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtata 189  Q
    |||| |||| ||||||||| ||||||||||||||| ||||||    
T  22535855 ccccaatttcaaaacacggatatgggacgggtaacgggtata 22535896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 44106708 - 44106879
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttc 148  Q
    |||||||||||||   ||||||||| ||||||  ||||||  ||| |||||||| || ||| |||||||||||||| |||   |||| || ||| |||||    
T  44106708 catggcaacaaaacacatacccgtgattacccgcccgaacaaaactcaatttgacggttttccccgttttgactgggtttgggtatgagtatgg-ttttc 44106806  T
Q  149 cccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||| || | ||||||||||||||||||| ||||| | |||||| ||||| | ||||||| ||||| |||||||    
T  44106807 cccaatcttaaaacacgggtatgggacgcgtaacggatatataggtatctaccccgaacccatactcaaaccc 44106879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 30616254 - 30616329
Alignment:
Q  107 ttttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaac 182  Q
    ||||||||||||||||| ||||   ||||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  30616254 ttttcccgttttgactgaatttgagtatgggtttgggttttccccgatttcaaaacacggatatgggacgggtaac 30616329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 34154542 - 34154415
Alignment:
Q  95 caatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataag 193  Q
    |||||||| |||||||||| ||||||||||| |||  |||||||| ||  ||||||||||||| |||||| |||||||  |||||||||| | ||||| |    
T  34154542 caatttgacggattttccccgttttgactgggtttggatatgggtatgtgttttccccgatttcaaaacatgggtatgaaacgggtaacaagaatatagg 34154443  T
Q  194 tatccaacccgaactcatacccaaaccc 221  Q
    || ||| ||||||| |||||||| ||||    
T  34154442 tacccaccccgaacccatacccataccc 34154415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 52198263 - 52198156
Alignment:
Q  114 gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
    ||||||||||| |||   ||||||| ||| |||| |||||| | ||||||| ||||||||||||||||| |||||||| ||| ||| ||||||| |||||    
T  52198263 gttttgactgggtttgggtatgggtatgggtttttcccgatctcaaaacacaggtatgggacgggtaacgggtatataggtacccaccccgaacccatac 52198164  T
Q  214 ccaaaccc 221  Q
    ||||||||    
T  52198163 ccaaaccc 52198156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 49 - 219
Target Start/End: Complemental strand, 53632078 - 53631907
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcc-cgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||| |||| | |||||||||||||| | | |||||| |||  ||||||| || |||||| |||||||| ||| | ||  ||||||||||  ||||    
T  53632078 catggcaataaaactcatacccgtggttactcgttcgaaccaaacttaatttgacgggttttcctcgttttgaatgggtataggtatgggtttgagtttt 53631979  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    |||  |||| |||||||| ||||| |||||||||| |||||||| ||| ||| ||||||| ||||| |||||    
T  53631978 cccaaattttaaaacacgtgtatgagacgggtaacgggtatataggtacccaccccgaacccatactcaaac 53631907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 6738335 - 6738440
Alignment:
Q  65 atacccgtggttacccatccgaaccgaacccaatttgat-ggattttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaaca 163  Q
    ||||||| ||||||||  ||||||| ||||||||||||  || |||||||||||||||||| |||   ||||||| ||| ||||||||||||| ||||||    
T  6738335 atacccgcggttacccgcccgaaccaaacccaatttgacaggtttttcccgttttgactgggtttgggtatgggtatgggttttccccgatttcaaaaca 6738434  T
Q  164 cgggta 169  Q
    ||||||    
T  6738435 cgggta 6738440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 218
Target Start/End: Complemental strand, 34119808 - 34119660
Alignment:
Q  71 gtggttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggta 169  Q
    ||||||| ||| ||||||| || | ||||||| || |||||||  |||||| ||| |||   |||| |||||  |||| |||||||| ||||||||||||    
T  34119808 gtggttaaccacccgaaccaaatctaatttgacgggttttccccattttgattgggtttgggtatgagtttgagtttttcccgattttaaaacacgggta 34119709  T
Q  170 tgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    || ||||| ||||||||||||| ||| ||| ||||||| ||||||||||    
T  34119708 tgagacggataacaggtatataggtacccaccccgaacccatacccaaa 34119660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 52572783 - 52572640
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||| ||  ||||||| ||| ||||||||  | |||||||  |||||||||| |||   ||||||| ||  ||||    
T  52572783 catggcaacaaaacccatacccgtggttatccgcccgaaccaaactcaatttgacaggttttccccattttgactgggtttgggtatgggtatgagtttt 52572684  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatata 191  Q
    || |||| | ||||||||||||||||||||||||| ||||||||    
T  52572683 cctcgatctcaaaacacgggtatgggacgggtaacgggtatata 52572640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 31126826 - 31126880
Alignment:
Q  165 gggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||    
T  31126826 gggtatgggacgggtaacatgtatataggtatccaccccgaactcatacccaaac 31126880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 20087135 - 20087050
Alignment:
Q  85 gaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggta 169  Q
    ||||| || ||||||||| |||||||| ||||||||||||| |||  |||||||| ||| ||||||||||||| ||||||||||||    
T  20087135 gaaccaaatccaatttgacggattttctccgttttgactgggtttggatatgggtatgggttttccccgatttcaaaacacgggta 20087050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 223
Target Start/End: Original strand, 17146090 - 17146239
Alignment:
Q  71 gtggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtat 170  Q
    ||||| |||| ||| |||| || ||||||||| || ||| |||||||||||   ||||   ||||||| ||| ||||  || || | |||||| ||||||    
T  17146090 gtggtcacccgtccaaaccaaatccaatttgacgggtttccccgttttgac---atttgggtatgggtatgggttttttccaatctcaaaacatgggtat 17146186  T
Q  171 gggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccctt 223  Q
    || ||||||||||| |||||| ||||||| ||||||| ||||| |||||||||    
T  17146187 ggaacgggtaacagttatataggtatccaccccgaacccatacacaaaccctt 17146239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 43582727 - 43582617
Alignment:
Q  73 ggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatg 171  Q
    ||||||||  ||||||| || |||||||||||| ||||| ||||||| ||||| |||   |||| || ||  ||||||||||||| ||||||||||||||    
T  43582727 ggttacccgcccgaaccaaatccaatttgatgggttttctccgtttttactgggtttgagtatgtgtatgagttttccccgatttcaaaacacgggtatg 43582628  T
Q  172 ggacgggtaac 182  Q
     ||||||||||    
T  43582627 agacgggtaac 43582617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 19111908 - 19111735
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    |||| |||||||| | ||| |||||||||| || |  |||| || ||||||||| ||||||| ||| |||||| ||| |||   |||| |||||  ||||    
T  19111908 catgacaacaaaactcatatccgtggttactcacctaaaccaaatccaatttgacggatttttccctttttgattgggtttgggtatgagtttgagtttt 19111809  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
     |||||||| |||||||||||| |||| || |||| |||||||||||| ||| ||  ||| ||| |||||||||    
T  19111808 tcccgatttcaaaacacgggtacgggatggataacgggtatataagtacccaccctaaacccatgcccaaaccc 19111735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 23153979 - 23154143
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||||  ||| ||| ||||||||  | ||||| | |||||||||| || |||| |||||||| ||||  |||   ||||||| ||| ||||    
T  23153979 catggcaacaaaatccatatccgcggttacccgccggaaccaaccccaatttgacgggtttttcccgttttaactgagtttgggtatgggtatgggtttt 23154078  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
    ||||||||| ||| ||||||||||| |||||||||  ||||||| ||| |||  |||||| |||||    
T  23154079 ccccgatttcaaa-cacgggtatggaacgggtaacgagtatataggtacccactccgaacccatac 23154143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 23580942 - 23580833
Alignment:
Q  107 ttttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaa 206  Q
    |||||||||||||||||| |||   ||||||| ||  |||||||| |||| |||||||| |||||  ||||||||| |||||||| ||| |||  |||||    
T  23580942 ttttcccgttttgactgggtttgggtatgggtatgagttttccccaatttcaaaacacgagtatgaaacgggtaacgggtatataggtacccactccgaa 23580843  T
Q  207 ctcataccca 216  Q
    | ||||||||    
T  23580842 cccataccca 23580833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 221
Target Start/End: Complemental strand, 42243525 - 42243388
Alignment:
Q  85 gaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaaca 183  Q
    ||||| |||||||||||| || ||||||| | ||||||||| |||   |||| |||||| |||| |||||||| || ||||||||||| || |||||||     
T  42243525 gaaccaaacccaatttgacgggttttccccggtttgactgggtttgggtatgagtttgggtttttcccgatttcaatacacgggtatgagatgggtaacg 42243426  T
Q  184 ggtatataagtatccaacccgaactcatacccaaaccc 221  Q
     | |||||  |||||| ||| || ||||||||||||||    
T  42243425 aggatatatttatccaccccaaattcatacccaaaccc 42243388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 29858489 - 29858565
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactgg 124  Q
    |||||||||||||   ||||||||||||||||  ||||||| |||||||||| | ||||||| ||||||||||||||    
T  29858489 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttaacggattttccccgttttgactgg 29858565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 10043280 - 10043369
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||||| ||||||| | ||| |||||| |||||||||||||||||| ||  |||| | | ||| ||||||| |||||||| ||||    
T  10043280 tatgggtttgggttttccctggtttcaaaacatgggtatgggacgggtaacggggttatatgcacccaccccgaacccatacccataccc 10043369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 29842381 - 29842317
Alignment:
Q  149 cccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
    |||||||| |||||||||||||||||| |||||| || ||||| ||| ||| ||||||| |||||    
T  29842381 cccgattttaaaacacgggtatgggactggtaacgggaatataggtacccaccccgaacccatac 29842317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 34593282 - 34593219
Alignment:
Q  80 catccgaaccgaacccaatttgatggattttc--ccgttttgactggatttatatatgggtttg 141  Q
    |||||||||| |||||||||||| |||||||   ||||||||||||||||||  ||||||||||    
T  34593282 catccgaaccaaacccaatttgacggatttttttccgttttgactggatttaggtatgggtttg 34593219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 1337128 - 1337077
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacagg 185  Q
    ||||||||| ||||| ||||||| |||||| | |||||||||||||||||||    
T  1337128 tgggtttgggttttcaccgatttcaaaacaagtgtatgggacgggtaacagg 1337077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 171
Target Start/End: Original strand, 23910182 - 23910289
Alignment:
Q  65 atacccgtggttacccatccgaaccgaacccaatttgatggattttc-ccgttttgactggatttatatatgggtttggattttccccgatttaaaaaca 163  Q
    |||| ||||||||||  |||||| ||||  |||||||| |||||||  ||||||||||||| ||| | |||| |||||  |||||| |||||| ||||||    
T  23910182 atactcgtggttacctgtccgaatcgaattcaatttgacggattttttccgttttgactgggtttgtgtatgagtttgagttttcctcgatttcaaaaca 23910281  T
Q  164 cgggtatg 171  Q
    ||| ||||    
T  23910282 cggatatg 23910289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 55438787 - 55438824
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaa 181  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  55438787 ttttccccaatttaaaaacacgggtatgggacaggtaa 55438824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 182
Target Start/End: Original strand, 3385804 - 3385904
Alignment:
Q  83 ccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaa 181  Q
    ||||||| ||||||||| || || ||||||| | ||||||||| ||||  ||||| |||| |||||  || |||| |||||||||||| ||||| |||||    
T  3385804 ccgaaccaaacccaattcgacgggttttccccgctttgactgggtttaggtatggatttgaatttttacccatttcaaaacacgggtacgggacaggtaa 3385903  T
Q  182 c 182  Q
    |    
T  3385904 c 3385904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 12369168 - 12369104
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc 113  Q
    |||||||||||||   |||||||||||||  || ||||||| ||| |||||||| ||||||||||    
T  12369168 catggcaacaaaacccatacccgtggttattcacccgaaccaaactcaatttgacggattttccc 12369104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 218
Target Start/End: Original strand, 30904737 - 30904899
Alignment:
Q  54 caacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttccccga 153  Q
    |||||||||  ||||||| || || || |||||||  || ||||||||| || ||| |||| ||| ||||| |||   |||| |||||| ||||  | ||    
T  30904737 caacaaaatccatacccgcgggtatccgtccgaactaaatccaatttgacgggtttccccgcttttactgg-tttgggtatgagtttggcttttttctga 30904835  T
Q  154 tttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaa 218  Q
    ||| |||||||||||| ||||||||| || || ||||| ||| ||| ||||||| ||||||||||    
T  30904836 tttcaaaacacgggtacgggacgggt-acggggatataggtacccaccccgaacccatacccaaa 30904899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 30847121 - 30846948
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||  ||||||| |||||||||||| || ||||||| ||||||||||| |||   ||||||| ||| ||||    
T  30847121 catggcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggtttt 30847022  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| |  |||||||||||||||||||||||| |||||||| ||| ||| ||||||| |||||||||||||    
T  30847021 ccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 30846948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 48 - 221
Target Start/End: Original strand, 24414045 - 24414219
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattt 146  Q
    ||||||||||||||   ||||| ||||||||||  ||||||| |||||||||||| || ||||||| ||||||| ||| |||   ||||||| | | |||    
T  24414045 acatggcaacaaaacccatacctgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgattgggtttgggtatgggtatcggttt 24414144  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||| | |||||||||||||||||||||||||||||||||| ||| ||| ||||||| |||||||||||||    
T  24414145 tccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatacccaaaccc 24414219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 9632561 - 9632388
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||  ||||||| ||| |||||||| || |||| |||||||||| ||| |||   ||||||| ||| ||||    
T  9632561 catggcaacaaaacccatacccgtggttacccgcccgaaccaaactcaatttgacgggtttttcccgttttgaatgggtttgagtatgggtatgggtttt 9632462  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| |  |||||||||||||||||||||||  |||||||| ||||||| ||||||| |||||||||||||    
T  9632461 ccccgatctcgaaacacgggtatgggacgggtaatgggtatataggtatccaccccgaacccatacccaaaccc 9632388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 65 - 220
Target Start/End: Original strand, 31942115 - 31942272
Alignment:
Q  65 atacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggattttccccgattt-aaaaac 162  Q
    ||||||||||||||||  || |||| ||| ||||||||||| |||| |||| ||||||||| |||  |||||||||||| || ||| |||||| ||||||    
T  31942115 atacccgtggttacccgcccaaaccaaactcaatttgatgggtttttcccgctttgactgggtttggatatgggtttgggttatcctcgatttcaaaaac 31942214  T
Q  163 acgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaacc 220  Q
    ||||||||| ||||||||||||||||||||||| ||| ||| ||| |||| |||||||    
T  31942215 acgggtatgagacgggtaacaggtatataagtacccaccccaaacccataaccaaacc 31942272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 49 - 215
Target Start/End: Complemental strand, 37106867 - 37106700
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||| |||||||| | |||| || ||||||||  ||||||| |||||||||||| || ||||||| ||||||||||  |||   ||||||| ||| ||||    
T  37106867 catgacaacaaaactcatactcgcggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgagtttgggtatgggtatgggtttt 37106768  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcataccc 215  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||| |||  |||||| |||||||    
T  37106767 ccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccactccgaacccataccc 37106700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 36128020 - 36128193
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   |||||||||||||| | |||||||| |||| ||||||| |||||||||| ||||||||||| |||   ||||||| ||   |||    
T  36128020 catggcaacaaaacccatacccgtggttactcgtccgaaccaaacctaatttgacggattttccccgttttgactgggtttgggtatgggtatgtggttt 36128119  T
Q  148 ccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| |  |||||||||||||||| ||||||| |||||||| |||  || ||||||| |||||||||||||    
T  36128120 ccccgatctcgaaacacgggtatgggatgggtaacgggtatataggtactcaccccgaacccatacccaaaccc 36128193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 65 - 220
Target Start/End: Complemental strand, 13830894 - 13830739
Alignment:
Q  65 atacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggattttccccgatttaaaaaca 163  Q
    ||||||||||||||||  ||||||| |||||||||||| || |||| ||| |||||||||| |||   ||||||| ||| |||||| |||| | ||||||    
T  13830894 atacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccattttgactgggtttgggtatgggtatgggttttcctcgatctcaaaaca 13830795  T
Q  164 cgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaacc 220  Q
    |||||||||||| |||||| |||||||||||| ||| ||||||| ||||| ||||||    
T  13830794 cgggtatgggac-ggtaacgggtatataagtacccaccccgaacccatactcaaacc 13830739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 7314596 - 7314735
Alignment:
Q  83 ccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaa 181  Q
    ||||||| ||| |||||||| |||||||||| ||||||||||| |||  |||||||| ||| ||||||||||||| |||| ||| |||||||||||||||    
T  7314596 ccgaaccaaactcaatttgacggattttccccgttttgactgggtttggatatgggtatgggttttccccgattttaaaatacgagtatgggacgggtaa 7314695  T
Q  182 caggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    | |||||||| ||  ||| ||||||| |||||||| ||||    
T  7314696 cgggtatataggttcccaccccgaacccatacccacaccc 7314735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 37999574 - 37999485
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| ||| ||||||||||| | |||||||||||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||    
T  37999574 tatgggtatgggttttccccgatctcaaaacacgggtatgagacgggtaacgggtatataagtacccaccccgaactcatacccaaaccc 37999485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 37472672 - 37472813
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattt 146  Q
    |||||| |||||||   |||||||  |||||||  ||||||| ||| |||||||| || ||||||| ||||||||||| |||   |||| || |||||||    
T  37472672 acatggtaacaaaacccatacccgcagttacccgcccgaaccaaactcaatttgacgggttttccccgttttgactgggtttgggtatgagtatggattt 37472771  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaacaggtat 188  Q
    |||||||||| ||||||||||||||||||||||||| |||||    
T  37472772 tccccgatttcaaaacacgggtatgggacgggtaacgggtat 37472813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 13705269 - 13705448
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggat--- 144  Q
    ||||||||||||| | |||||| ||||||||| ||||||||  ||||||||||| || ||||||| |||||||| || |||   ||||||| ||| |       
T  13705269 catggcaacaaaactcatacccatggttacccgtccgaaccatacccaatttgacgggttttccccgttttgacagggtttgggtatgggtatgggtatg 13705368  T
Q  145 ---tttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
       |||||||||||| |||||||||||||| ||| |||||| |||||||| ||| ||| ||||||| |||||| ||||||    
T  13705369 agttttccccgatttcaaaacacgggtatgagacaggtaacgggtatataggtacccaccccgaacccatacctaaaccc 13705448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 8915898 - 8916024
Alignment:
Q  95 caatttgatggatttt-cccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataag 193  Q
    |||||||| ||||||| |||||||||||||  |||  |||||||| ||| ||||| | ||| | |||||||||||||||||||||||||||||||||| |    
T  8915898 caatttgacggatttttcccgttttgactgagtttggatatgggtatgggttttctc-gatctcaaaacacgggtatgggacgggtaacaggtatatagg 8915996  T
Q  194 tatccaacccgaactcatacccaaaccc 221  Q
    || ||| ||||||| ||||| |||||||    
T  8915997 tacccaccccgaacccatactcaaaccc 8916024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 175
Target Start/End: Complemental strand, 12341775 - 12341648
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggatttt-cccgttttgactggatttatatatgggtttggatttt 147  Q
    ||||||||||||| | ||||||| ||||| || |||||||| |||||||||||| || |||| |||||||||||||  |||   ||||||| ||| ||||    
T  12341775 catggcaacaaaactcatacccgcggttatccgtccgaaccaaacccaatttgacgggttttccccgttttgactgagtttgggtatgggtatgggtttt 12341676  T
Q  148 ccccgatttaaaaacacgggtatgggac 175  Q
    ||||||||| ||||||| ||||||||||    
T  12341675 ccccgatttcaaaacacaggtatgggac 12341648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 6027889 - 6027968
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatac 213  Q
    ||||||||| ||||||||||||| |||||| ||||||| ||||||||||||||||||| ||| ||| ||||||| |||||    
T  6027889 tgggtttgggttttccccgattttaaaacatgggtatgagacgggtaacaggtatataggtacccaccccgaacccatac 6027968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 10208345 - 10208516
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttc 148  Q
    ||||||||||||| | ||||||||| ||| ||  ||||||| ||   ||||||| || ||| |||||||||||||| |||   ||||||| ||| |||||    
T  10208345 catggcaacaaaactcatacccgtgattatccgcccgaaccaaagttaatttgacggttttccccgttttgactgggtttgggtatgggtatgggttttc 10208444  T
Q  149 cccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaacc 220  Q
    ||| || | ||||||||||||||||||||||||  | |||||| ||| | | ||||||| ||||| ||||||    
T  10208445 cccaatcttaaaacacgggtatgggacgggtaatggatatataggtacctaccccgaacccatactcaaacc 10208516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 221
Target Start/End: Original strand, 44746022 - 44746196
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattt 146  Q
    |||||||||||||| | ||| ||  ||||||||| ||| ||| |||||||||||| || ||||||| ||||||| ||  |||   ||||| ||||| |||    
T  44746022 acatggcaacaaaactcatatccacggttacccacccgtaccaaacccaatttgacgggttttccccgttttgattgagtttgggtatggatttgggttt 44746121  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||||| ||||||||  ||||||||||||||  |||||||| ||| |||   | ||||||||| |||||||    
T  44746122 tccccgatttcaaaacacgaatatgggacgggtaatgggtatatatgtacccacttcaaactcatactcaaaccc 44746196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 45256939 - 45256825
Alignment:
Q  107 ttttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaa 206  Q
    |||||||||||||||||| | |  ||||| || ||  ||||||||||||| |||||||||||||| ||||| |||  |||||||||||| ||| ||||||    
T  45256939 ttttcccgttttgactgggtgtggatatgagtatgagttttccccgatttcaaaacacgggtatgagacggttaatgggtatataagtacccaccccgaa 45256840  T
Q  207 ctcatacccaaaccc 221  Q
    | |||||| ||||||    
T  45256839 cccatacctaaaccc 45256825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 10920813 - 10920684
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgat-ggattttcccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||   ||||||||||||||||  ||||||| || |||||||||| || ||| |||||||||||||| |||   ||||||| ||||||||    
T  10920813 catggcaacaaaacccatacccgtggttacccgcccgaaccaaatccaatttgataggttttccccgttttgactgggtttgggtatgggtatggatttt 10920714  T
Q  148 ccccgatttaaaaacacgggtatgggacgg 177  Q
      ||||| | |||||||| |||||||||||    
T  10920713 ttccgatctcaaaacacgagtatgggacgg 10920684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 221
Target Start/End: Original strand, 19104751 - 19104928
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgat-ggattttcccgttttgactggatttatatatgggtttggatttt 147  Q
    |||||||||||||  |||||  ||||||||| ||||||| | ||||||||||||| || |||| ||||||||| ||| |||   |||| |||||| ||||    
T  19104751 catggcaacaaaacctatacatgtggttaccaatccgaatcaaacccaatttgatgggttttttccgttttgattgggtttgggtatgagtttgggtttt 19104850  T
Q  148 ccccgatttaaaaacacgg----gtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||||  ||||||||    |||||||| | ||||| |||||||| ||||||| | ||||  ||||| |||||||    
T  19104851 ccccgatttccaaacacgggcctgtatgggatgtgtaacgggtatataggtatccacctcgaatccatactcaaaccc 19104928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 38342516 - 38342607
Alignment:
Q  131 atatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    |||||||||||  ||||||||||||| |||| |||| || |||||||||||| || ||||| ||| ||| ||||||| ||||||||||||||    
T  38342516 atatgggtttgagttttccccgattttaaaatacggatacgggacgggtaacggggatatatgtacccaccccgaacccatacccaaaccct 38342607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 212
Target Start/End: Complemental strand, 45115719 - 45115569
Alignment:
Q  65 atacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggttt--ggattttccccgatttaaaaa 161  Q
    ||||||| ||||||   |||||||| || ||||||||| || ||||||| ||||||||||| |||   ||||||| |  |  |||||| |||||| ||||    
T  45115719 atacccgcggttacttgtccgaaccaaatccaatttgacgggttttccccgttttgactgggtttgggtatgggtatatgagttttcctcgatttcaaaa 45115620  T
Q  162 cacgggtatgggacgggtaacaggtatataagtatccaacccgaactcata 212  Q
    |||||||||| ||||||||||||||||||| ||| ||| ||||||| ||||    
T  45115619 cacgggtatgagacgggtaacaggtatataggtacccatcccgaacccata 45115569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 15546834 - 15546784
Alignment:
Q  133 atgggtttggattttccccgatttaaaaacacgggtatgggacgggtaaca 183  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  15546834 atgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaaca 15546784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 43371632 - 43371554
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    ||||||||||||| |||| ||||||| |||||||||||| || ||||| ||| ||| ||| ||||||||||||||||||    
T  43371632 ttttccccgattttaaaatacgggtacgggacgggtaacggggatatatgtacccaccccaaactcatacccaaaccct 43371554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 22900885 - 22900796
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||| ||||| ||  ||||  || ||| |||||||||||||||| ||||    
T  22900885 tatgggtttgggtttttcccgatttcaaaacacgggtatgggacgagtaacggggttatatatacccaccccgaactcatacccataccc 22900796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 42797915 - 42798074
Alignment:
Q  49 catggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttc 148  Q
    |||||||||||||   ||||||||||||||||  ||||||| || | ||||||| || |||| | ||||||||||| |||      | || |||||||||    
T  42797915 catggcaacaaaacccatacccgtggttacccgcccgaaccaaatctaatttgacgggtttttctgttttgactgggttt------gagtatggattttc 42798008  T
Q  149 cccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaacc 220  Q
    |||      |||||||||||||| |||||||||| |||||||||||| ||| ||||||| ||||| ||||||    
T  42798009 ccc------aaaacacgggtatgagacgggtaacgggtatataagtacccaccccgaacccatacacaaacc 42798074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 14331616 - 14331528
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    ||||| ||| |||||||| ||||||||| || ||||||||||||||||| || ||||| ||| |||  |||||| ||||||||||||||    
T  14331616 tgggtatgggttttcccctatttaaaaatacaggtatgggacgggtaacggggatatatgtacccactccgaacccatacccaaaccct 14331528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 221
Target Start/End: Original strand, 35248386 - 35248472
Alignment:
Q  135 gggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    |||||||| |||||| |||||  ||||||||||||||||||||||||  || ||| | ||| ||| ||||||| |||||||||||||    
T  35248386 gggtttgggttttccacgattacaaaacacgggtatgggacgggtaaaggggataaaggtacccaccccgaacccatacccaaaccc 35248472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 191
Target Start/End: Original strand, 12193740 - 12193884
Alignment:
Q  49 catggcaacaaaatttatacccgtg-gttacccatccgaaccgaacccaatttgatggattttcccg-ttttgactggatttatatatgggtttggattt 146  Q
    |||||||||||||   ||||||| | |||||||| |||| || |||||||||||| || |||| ||| |||||||||| |||   |||| || ||  |||    
T  12193740 catggcaacaaaaaccatacccgcgcgttacccacccgagccaaacccaatttgacgggtttttccgattttgactgggtttgggtatgagtatgtgttt 12193839  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaacaggtatata 191  Q
    | |||||||| | ||||||||||||||||||||||  ||||||||    
T  12193840 ttcccgatttcagaacacgggtatgggacgggtaatgggtatata 12193884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 215
Target Start/End: Original strand, 24051622 - 24051705
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcataccc 215  Q
    |||||||||||  |||| ||||||| |||| ||| ||||||||||||||||||| ||||| ||| | | ||||||| |||||||    
T  24051622 tatgggtttgggatttctccgattttaaaatacgagtatgggacgggtaacagggatatatgtacctaccccgaacccataccc 24051705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 18106082 - 18106155
Alignment:
Q  98 tttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtat 170  Q
    ||||| |||||||||| ||||||||||| |||  |||||||| ||| ||||||||||| | |||||||||||||    
T  18106082 tttgacggattttccccgttttgactgggtttggatatgggtatgggttttccccgatctcaaaacacgggtat 18106155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 4428040 - 4427925
Alignment:
Q  107 ttttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaa 206  Q
    |||||||  |||||||| ||||   ||||||||||| |||||||||| || | || ||||||| |||||||| ||| |  ||||| | ||||| | ||||    
T  4428040 ttttcccaatttgactgaatttgagtatgggtttgggttttccccgacttcataatacgggtaagggacgggcaacggtgatatatggatccacctcgaa 4427941  T
Q  207 ctcatacccaaaccct 222  Q
    | ||||||||||||||    
T  4427940 cccatacccaaaccct 4427925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 14540860 - 14540813
Alignment:
Q  144 ttttccccgatttaaaaacacgggtatgggacgggtaacaggtatata 191  Q
    ||||||||||||| |||||||||||||| ||| |||||| ||||||||    
T  14540860 ttttccccgatttcaaaacacgggtatgagacaggtaacgggtatata 14540813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 25210466 - 25210379
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||| | |||| ||||| || |||||||||||||||||||||||||  | ||||| ||| ||| ||| ||| |||||| ||||||    
T  25210466 tgggtttaggtttttcccgactttaaaacacgggtatgggacgggtaacgaggatatatgtacccaccccaaacccataccaaaaccc 25210379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 3547257 - 3547167
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    ||||| ||||| ||||  ||||||| |||| ||||||| |||||||||||| |  ||||| ||| ||| ||||||| |||| |||||||||    
T  3547257 tatggatttgggtttttaccgatttcaaaatacgggtacgggacgggtaacggagatatatgtacccaccccgaacccatatccaaaccct 3547167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 40734588 - 40734662
Alignment:
Q  138 tttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcata 212  Q
    ||||| |||||  ||||||  ||||||||||||| ||||||||||||  ||||| | ||||| ||||||||||||    
T  40734588 tttgggttttcagcgattttcaaacacgggtatgagacgggtaacagagatatatgaatccatcccgaactcata 40734662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 222
Target Start/End: Complemental strand, 44057969 - 44057883
Alignment:
Q  137 gtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatcca-acccgaactcatacccaaaccct 222  Q
    |||||||||||||| ||||| |||| || |||| |||||||||||  || ||||| ||| |||  ||||||| ||||||||||||||    
T  44057969 gtttggattttccctgatttcaaaataccggtacgggacgggtaatggggatatatgtacccacccccgaacccatacccaaaccct 44057883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 214
Target Start/End: Original strand, 6164472 - 6164553
Alignment:
Q  133 atgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacc 214  Q
    |||||||||| |||||||| |||| ||||   ||||| |||||||||||| |  ||||| ||| ||| ||||||||||||||    
T  6164472 atgggtttgggttttccccaatttcaaaatttgggtacgggacgggtaacggtgatatatgtacccaccccgaactcatacc 6164553  T

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Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 30696995 - 30696927
Alignment:
Q  152 gatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaacc 220  Q
    ||||| |||||| || || | ||||||||||||  ||||| ||| ||| ||||||||||||||||||||    
T  30696995 gattttaaaacatggatacgagacgggtaacagagatatatgtacccaccccgaactcatacccaaacc 30696927  T

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Target: scaffold0036 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 33483 - 33396
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||| ||| ||| ||||||| |||||||||||    
T  33483 tatgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatatatgtacccaccccgaacccatacccaaac 33396  T

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Target: scaffold0022 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 190
Target Start/End: Complemental strand, 90749 - 90629
Alignment:
Q  65 atacccgtggttacccatccgaaccgaacccaatttgatggattttccc-gttttgactggatttatatatgggtttggattttccccgatttaaaaaca 163  Q
    ||||||||||||||||  ||||||  ||| |||||||| |||||||||| ||||||||||| |||      |||| ||| ||||||||||||| ||||||    
T  90749 atacccgtggttacccgcccgaactaaactcaatttgacggattttccccgttttgactgggttt------gggtatgggttttccccgatttcaaaaca 90656  T
Q  164 cgggtatgggacgggtaacaggtatat 190  Q
    |||||||| ||||| |||| |||||||    
T  90655 cgggtatgagacggttaacgggtatat 90629  T

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Target: scaffold0005 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 211454 - 211367
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaac 219  Q
    ||||||||||| ||||| ||||||| |||| ||||||| | ||||||||||||| ||||| ||| ||| ||||||| |||||||||||    
T  211454 tatgggtttgggttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccccgaacccatacccaaac 211367  T

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Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 14097 - 14230
Alignment:
Q  48 acatggcaacaaaatttatacccgtggttacccatccgaaccgaacccaatttga-tggattttcccgttttgactggatttatatatgggtttggattt 146  Q
    ||||| |||||||| | |||| |||||||||||| || |||| ||||||||||||  || |||||||||||||  ||| |||   |||| |||||  |||    
T  14097 acatgacaacaaaactcatactcgtggttacccacccaaaccaaacccaatttgacgggtttttcccgttttgtttgggtttgggtatgagtttgagttt 14196  T
Q  147 tccccgatttaaaaacacgggtatgggacgggtaa 181  Q
    |||||||||| ||||||||||||||| ||||||||    
T  14197 tccccgattt-aaaacacgggtatggaacgggtaa 14230  T

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Target: scaffold0008 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 67860 - 67749
Alignment:
Q  111 cccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactca 210  Q
    |||| ||||||||| |||   ||||||||||||||||||||||||| |||| |||| || ||||||| |||| || ||||| ||| ||| ||||| |  |    
T  67860 cccgatttgactgggtttgagtatgggtttggattttccccgattttaaaatacggatacgggacggataacggggatatatgtacccaccccgagccta 67761  T
Q  211 tacccaaaccct 222  Q
    ||||||||||||    
T  67760 tacccaaaccct 67749  T

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Target: scaffold0008; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 75703 - 75592
Alignment:
Q  111 cccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactca 210  Q
    |||| ||||||||| |||   ||||||||||||||||||||||||| |||| |||| || ||||||| |||| || ||||| ||| ||| ||||| |  |    
T  75703 cccgatttgactgggtttgagtatgggtttggattttccccgattttaaaatacggatacgggacggataacggggatatatgtacccaccccgagccta 75604  T
Q  211 tacccaaaccct 222  Q
    ||||||||||||    
T  75603 tacccaaaccct 75592  T

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Target: scaffold0013 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 105467 - 105557
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    |||||| |||||||||  |||||||   || ||||||| ||||||||||||||| ||||| ||| ||| ||||||| ||||||||||||||    
T  105467 tatgggattggattttttccgatttcttaatacgggtacgggacgggtaacagggatatatgtacccaccccgaacccatacccaaaccct 105557  T

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Target: scaffold0184 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 3059 - 2969
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    |||| |||||| ||||||||||||| |||| |||||||  |||||| |||| || ||||| ||| ||| ||||||| ||||| ||||||||    
T  3059 tatgagtttgggttttccccgatttcaaaatacgggtacaggacggataactgggatatatgtacccaccccgaacccatactcaaaccct 2969  T

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Target: scaffold0198 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 221
Target Start/End: Original strand, 20742 - 20826
Alignment:
Q  137 gtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||||| |||||||| ||||| || ||||| |||||||||  || |||||| |||||| | ||||| ||||| |||||||    
T  20742 gtttggatttttcccgatttcaaaactcgagtatgagacgggtaatggggatataaatatccacctcgaacccatactcaaaccc 20826  T

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Target: scaffold0097 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 33685 - 33625
Alignment:
Q  131 atatgggtttggattttccccgatttaaaaa-cacgggtatgggacgggtaacaggtatat 190  Q
    |||| ||||||| ||||| |||||||||||| |||||||||| ||||||||||| ||||||    
T  33685 atataggtttgggttttctccgatttaaaaaacacgggtatgagacgggtaacatgtatat 33625  T

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Target: scaffold0182 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 17040 - 16969
Alignment:
Q  149 cccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaacc 220  Q
    |||||||| |||| ||| ||||||||||||| || || ||||| ||| ||| |||||||||||| |||||||    
T  17040 cccgatttcaaaatacgtgtatgggacgggtgacggggatatatgtacccaccccgaactcatatccaaacc 16969  T

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Target: scaffold0135 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 36242 - 36155
Alignment:
Q  134 tgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||| |||| ||| | || | ||||||||||| |||||| ||||  ||||||| ||||||| ||| |||||||| ||||||||    
T  36242 tgggtttgggtttttcccaaatttataacacgggtataggacggataacgagtatataggtatccatcccaaactcataaccaaaccc 36155  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 212
Target Start/End: Original strand, 107330 - 107469
Alignment:
Q  73 ggttacccatccgaaccgaacccaatttgatggattttcccgttttgactggatttatatatgggtttggattttccccgatttaaaaacacgggtatgg 172  Q
    ||||| |||||||| || | ||| |||||| || ||| |||  ||||| ||| ||||  ||| ||||||  |||| | |||||| ||||||| |||||||    
T  107330 ggttatccatccgacccaaccccgatttgacggttttccccactttgattgggtttaggtataggtttgagtttttctcgatttcaaaacacaggtatgg 107429  T
Q  173 gacgggtaacaggtatataagtatccaacccgaactcata 212  Q
    |||||||| ||   ||||||||| ||| ||||||||||||    
T  107430 gacgggtagcatagatataagtacccaccccgaactcata 107469  T

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Target: scaffold0519 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 10360 - 10298
Alignment:
Q  159 aaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccc 221  Q
    ||||||||||||||||||| ||||||||||||| ||| |||   ||||| |||||||| ||||    
T  10360 aaacacgggtatgggacggataacaggtatataggtacccactacgaacccatacccataccc 10298  T

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Target: scaffold0059 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 222
Target Start/End: Complemental strand, 70185 - 70095
Alignment:
Q  132 tatgggtttggattttccccgatttaaaaacacgggtatgggacgggtaacaggtatataagtatccaacccgaactcatacccaaaccct 222  Q
    |||| ||||||||||| || ||||| | || ||||||| ||||||||||||  | ||||| ||| ||| ||| ||| ||||||||||||||    
T  70185 tatgagtttggatttttcctgatttcataatacgggtacgggacgggtaacgaggatatatgtacccaccccaaacccatacccaaaccct 70095  T

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