View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2779_high_22 (Length: 242)
Name: NF2779_high_22
Description: NF2779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2779_high_22 |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 36942746 - 36942983
Alignment:
| Q |
1 |
gtggatcccaatgattccgatagatatcaaactccacagcaacaaatggattatcagttgagttcaacctttggttatcaagtgttagacccatagaacc |
100 |
Q |
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| T |
36942746 |
gtggatcccaatgattccgatagatatcaaactccacagcaacaaatggattatcagttgagttcaacctttgattatcaagtgttagacccatagaacc |
36942845 |
T |
|
| Q |
101 |
accttttgttgcattaggcttttttgaaccataaggggctaggaagaatgcaatcccatctccatacatttgtctattctgtgaatctattgtaaatgtg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36942846 |
accttttgttgcattaggcttttttgaaccataaggggctaggaagaatgcaatcccatctccatacatttgtctattctgtgaatctattgtaaatgtg |
36942945 |
T |
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| Q |
201 |
aaatgagatgtgaaatctgtgagattgtttgtgatttt |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
36942946 |
aaatgagatgtgaaatctgtgagattgtttgtgatttt |
36942983 |
T |
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