View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2779_high_5 (Length: 360)

Name: NF2779_high_5
Description: NF2779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2779_high_5
NF2779_high_5
[»] chr8 (24 HSPs)
chr8 (54-360)||(39379482-39379787)
chr8 (104-255)||(8545355-8545508)
chr8 (98-255)||(30903969-30904127)
chr8 (163-261)||(32303050-32303149)
chr8 (98-239)||(28345414-28345556)
chr8 (163-251)||(30481432-30481520)
chr8 (163-261)||(24927938-24928037)
chr8 (98-251)||(29918530-29918684)
chr8 (64-205)||(36274932-36275073)
chr8 (163-268)||(45236054-45236160)
chr8 (163-261)||(27932402-27932501)
chr8 (165-238)||(1012610-1012683)
chr8 (178-261)||(1063511-1063595)
chr8 (170-261)||(17469251-17469343)
chr8 (163-261)||(29108822-29108921)
chr8 (219-332)||(11254937-11255051)
chr8 (183-304)||(33631861-33631978)
chr8 (178-283)||(34777070-34777176)
chr8 (96-190)||(6388577-6388672)
chr8 (126-247)||(9476028-9476150)
chr8 (193-255)||(35215555-35215617)
chr8 (162-246)||(2183622-2183706)
chr8 (162-202)||(2189907-2189947)
chr8 (215-251)||(15173891-15173927)
[»] chr4 (41 HSPs)
chr4 (104-240)||(42907822-42907958)
chr4 (96-246)||(36306712-36306863)
chr4 (163-273)||(5902603-5902714)
chr4 (163-261)||(6382273-6382372)
chr4 (163-261)||(11122870-11122969)
chr4 (106-251)||(21956826-21956971)
chr4 (163-261)||(7608965-7609064)
chr4 (163-261)||(44317530-44317629)
chr4 (95-185)||(25265225-25265315)
chr4 (162-251)||(1866561-1866650)
chr4 (99-251)||(25941068-25941221)
chr4 (104-283)||(16575047-16575222)
chr4 (163-261)||(11028068-11028167)
chr4 (127-240)||(12075654-12075768)
chr4 (177-251)||(21544588-21544662)
chr4 (163-259)||(47550356-47550453)
chr4 (163-258)||(31918562-31918658)
chr4 (150-268)||(19883050-19883169)
chr4 (163-261)||(43893223-43893321)
chr4 (165-261)||(1724311-1724408)
chr4 (127-238)||(4741241-4741352)
chr4 (162-261)||(14605926-14606026)
chr4 (104-251)||(25298845-25298992)
chr4 (177-260)||(29527821-29527905)
chr4 (162-261)||(47103732-47103832)
chr4 (163-258)||(55826627-55826723)
chr4 (109-203)||(9280949-9281044)
chr4 (163-261)||(21423856-21423955)
chr4 (163-261)||(31752451-31752550)
chr4 (163-273)||(32585484-32585595)
chr4 (99-199)||(37384203-37384303)
chr4 (183-251)||(3737791-3737859)
chr4 (96-203)||(21714035-21714143)
chr4 (99-238)||(33516097-33516237)
chr4 (104-170)||(17113096-17113162)
chr4 (165-247)||(26564828-26564910)
chr4 (165-238)||(6482060-6482133)
chr4 (190-255)||(37107433-37107498)
chr4 (144-192)||(37926535-37926583)
chr4 (215-251)||(43309530-43309566)
chr4 (245-285)||(50375891-50375931)
[»] chr5 (30 HSPs)
chr5 (95-285)||(6810078-6810264)
chr5 (78-205)||(18451943-18452071)
chr5 (163-261)||(4920815-4920914)
chr5 (98-251)||(17153092-17153246)
chr5 (108-308)||(16311240-16311448)
chr5 (163-261)||(22694903-22695001)
chr5 (170-261)||(40517802-40517894)
chr5 (148-251)||(27900413-27900516)
chr5 (163-285)||(35311811-35311931)
chr5 (163-261)||(10127070-10127162)
chr5 (249-290)||(24207766-24207807)
chr5 (150-282)||(29664947-29665084)
chr5 (162-238)||(35194014-35194090)
chr5 (163-261)||(4583108-4583207)
chr5 (163-261)||(5908689-5908788)
chr5 (162-255)||(12773828-12773922)
chr5 (178-247)||(28569037-28569106)
chr5 (108-199)||(7350471-7350563)
chr5 (95-194)||(12457437-12457537)
chr5 (163-258)||(15890196-15890291)
chr5 (177-255)||(2681219-2681298)
chr5 (215-261)||(33728002-33728049)
chr5 (162-255)||(12712564-12712658)
chr5 (177-251)||(38972925-38972999)
chr5 (183-255)||(10822533-10822606)
chr5 (162-195)||(15564624-15564657)
chr5 (162-247)||(23045007-23045092)
chr5 (147-255)||(32574945-32575054)
chr5 (100-159)||(457476-457536)
chr5 (178-261)||(20973497-20973581)
[»] chr3 (28 HSPs)
chr3 (163-268)||(44172615-44172721)
chr3 (163-268)||(44179315-44179421)
chr3 (163-273)||(23546930-23547041)
chr3 (163-261)||(49580053-49580152)
chr3 (163-264)||(44953432-44953534)
chr3 (163-261)||(7469778-7469877)
chr3 (146-251)||(4553162-4553267)
chr3 (104-240)||(30904838-30904974)
chr3 (163-261)||(44639263-44639362)
chr3 (163-261)||(52198144-52198243)
chr3 (170-261)||(29284332-29284424)
chr3 (163-259)||(29842297-29842393)
chr3 (163-258)||(39728660-39728756)
chr3 (95-202)||(772854-772961)
chr3 (163-261)||(39655273-39655372)
chr3 (163-261)||(52572598-52572697)
chr3 (100-240)||(3385878-3386019)
chr3 (165-261)||(4016044-4016141)
chr3 (166-203)||(53631896-53631933)
chr3 (193-253)||(40796146-40796206)
chr3 (127-194)||(40890299-40890366)
chr3 (167-261)||(48390817-48390912)
chr3 (178-261)||(4557305-4557389)
chr3 (170-268)||(30616274-30616373)
chr3 (163-261)||(34025943-34026042)
chr3 (215-261)||(49025721-49025768)
chr3 (227-264)||(10823693-10823731)
chr3 (180-261)||(23154065-23154146)
[»] chr2 (25 HSPs)
chr2 (163-261)||(8915938-8916036)
chr2 (163-268)||(9632376-9632482)
chr2 (98-251)||(25210301-25210455)
chr2 (162-274)||(35248366-35248485)
chr2 (163-261)||(13830726-13830824)
chr2 (163-261)||(37999473-37999572)
chr2 (170-261)||(30846943-30847035)
chr2 (163-261)||(24414132-24414231)
chr2 (95-198)||(13531870-13531974)
chr2 (163-261)||(10208430-10208529)
chr2 (148-247)||(35965310-35965408)
chr2 (163-345)||(42797910-42798087)
chr2 (163-247)||(45256813-45256897)
chr2 (163-261)||(36128106-36128205)
chr2 (183-261)||(37106702-37106781)
chr2 (162-251)||(3547155-3547244)
chr2 (162-247)||(38342534-38342619)
chr2 (162-264)||(14331516-14331619)
chr2 (162-240)||(44057871-44057950)
chr2 (164-261)||(13705361-13705459)
chr2 (98-203)||(30696848-30696954)
chr2 (235-273)||(42102666-42102704)
chr2 (99-205)||(17845448-17845556)
chr2 (162-247)||(43371542-43371627)
chr2 (147-203)||(4961510-4961566)
[»] chr6 (29 HSPs)
chr6 (165-261)||(2367317-2367414)
chr6 (163-261)||(32853833-32853932)
chr6 (163-268)||(32532529-32532635)
chr6 (163-258)||(3483926-3484022)
chr6 (178-261)||(28079696-28079780)
chr6 (163-261)||(5863383-5863482)
chr6 (163-261)||(24225687-24225786)
chr6 (163-261)||(27534673-27534772)
chr6 (163-261)||(27738761-27738860)
chr6 (163-260)||(12141374-12141472)
chr6 (163-261)||(10142518-10142617)
chr6 (215-261)||(30986294-30986341)
chr6 (171-273)||(32053085-32053188)
chr6 (216-261)||(10188080-10188126)
chr6 (95-240)||(10925465-10925611)
chr6 (171-252)||(14410864-14410946)
chr6 (150-247)||(256507-256604)
chr6 (96-157)||(372887-372948)
chr6 (185-261)||(9442441-9442518)
chr6 (162-247)||(29199900-29199985)
chr6 (183-262)||(32959869-32959949)
chr6 (193-264)||(34178326-34178398)
chr6 (121-191)||(1947862-1947933)
chr6 (106-240)||(13769003-13769138)
chr6 (163-257)||(15498313-15498408)
chr6 (165-247)||(7393902-7393984)
chr6 (166-247)||(12678109-12678190)
chr6 (178-247)||(20349068-20349137)
chr6 (165-237)||(30816251-30816323)
[»] chr1 (35 HSPs)
chr1 (150-251)||(48125694-48125795)
chr1 (163-267)||(29936406-29936511)
chr1 (163-261)||(24236761-24236860)
chr1 (163-261)||(36187220-36187319)
chr1 (163-261)||(51421848-51421947)
chr1 (95-244)||(5283611-5283761)
chr1 (104-255)||(47644866-47645018)
chr1 (163-261)||(19572512-19572611)
chr1 (163-261)||(23490771-23490870)
chr1 (163-261)||(28297924-28298023)
chr1 (163-261)||(49250773-49250872)
chr1 (99-243)||(48576137-48576282)
chr1 (98-260)||(39219182-39219346)
chr1 (163-261)||(18354080-18354179)
chr1 (163-261)||(34611063-34611162)
chr1 (163-251)||(16903513-16903601)
chr1 (64-238)||(41476976-41477151)
chr1 (162-255)||(16237310-16237404)
chr1 (163-284)||(42439641-42439769)
chr1 (163-283)||(10778539-10778666)
chr1 (162-251)||(12494999-12495088)
chr1 (170-261)||(17134944-17135036)
chr1 (215-258)||(24710889-24710933)
chr1 (213-284)||(33293502-33293580)
chr1 (171-251)||(34085233-34085313)
chr1 (165-240)||(9982912-9982987)
chr1 (183-261)||(45866185-45866264)
chr1 (98-195)||(23719527-23719624)
chr1 (165-203)||(49741066-49741104)
chr1 (183-264)||(50426658-50426740)
chr1 (213-261)||(23968619-23968668)
chr1 (104-199)||(25181133-25181230)
chr1 (162-203)||(35069948-35069989)
chr1 (177-268)||(23058470-23058562)
chr1 (163-203)||(23966863-23966903)
[»] chr7 (39 HSPs)
chr7 (162-273)||(27850314-27850426)
chr7 (163-261)||(7780002-7780101)
chr7 (163-261)||(16866163-16866262)
chr7 (165-247)||(12980373-12980455)
chr7 (173-261)||(26622955-26623044)
chr7 (163-261)||(35074464-35074563)
chr7 (163-261)||(38139792-38139891)
chr7 (183-285)||(41103670-41103773)
chr7 (163-261)||(45380101-45380200)
chr7 (163-268)||(3226939-3227045)
chr7 (215-261)||(24753210-24753256)
chr7 (104-251)||(23475274-23475423)
chr7 (162-251)||(32546185-32546274)
chr7 (163-251)||(18125239-18125327)
chr7 (163-258)||(21702653-21702749)
chr7 (162-261)||(44845135-44845235)
chr7 (163-261)||(30650625-30650724)
chr7 (183-261)||(45885765-45885844)
chr7 (104-273)||(29292636-29292809)
chr7 (177-261)||(22973396-22973481)
chr7 (104-247)||(3157017-3157161)
chr7 (147-223)||(3774047-3774123)
chr7 (183-261)||(10072480-10072559)
chr7 (183-273)||(45708853-45708944)
chr7 (177-261)||(18825872-18825957)
chr7 (165-268)||(5377081-5377185)
chr7 (172-255)||(16079016-16079100)
chr7 (163-261)||(25905622-25905721)
chr7 (183-251)||(44734368-44734436)
chr7 (163-238)||(19440034-19440109)
chr7 (163-261)||(23533604-23533702)
chr7 (163-257)||(39456019-39456113)
chr7 (165-202)||(2630633-2630670)
chr7 (162-247)||(18683967-18684052)
chr7 (78-240)||(37217912-37218076)
chr7 (257-285)||(42005987-42006015)
chr7 (104-195)||(43550483-43550575)
chr7 (163-239)||(44794051-44794126)
chr7 (169-256)||(48327445-48327533)
[»] scaffold0036 (1 HSPs)
scaffold0036 (165-261)||(33384-33481)
[»] scaffold0198 (1 HSPs)
scaffold0198 (146-251)||(20750-20855)
[»] scaffold0013 (2 HSPs)
scaffold0013 (177-233)||(128150-128206)
scaffold0013 (177-233)||(105498-105554)
[»] scaffold0005 (1 HSPs)
scaffold0005 (162-261)||(211352-211452)
[»] scaffold0519 (1 HSPs)
scaffold0519 (219-332)||(10342-10456)
[»] scaffold0184 (1 HSPs)
scaffold0184 (162-255)||(2957-3051)
[»] scaffold0059 (1 HSPs)
scaffold0059 (177-251)||(70098-70172)
[»] scaffold0009 (1 HSPs)
scaffold0009 (164-251)||(107402-107489)


Alignment Details
Target: chr8 (Bit Score: 255; Significance: 1e-142; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 54 - 360
Target Start/End: Complemental strand, 39379787 - 39379482
Alignment:
Q  54 taactcggacaagtgggtgtcttgtgaaagaccgagacatcgattgtgtaagtgaaatgatttaagatttggatttctatttatacagaaggataataaa 153  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39379787 taactcgggcaagtgggtgtcgtgtgaaagaccgagacatcgattgtgtaagtgaaatgatttaagatttggatttctatttatacagaaggataataaa 39379688  T
Q  154 ttgattcactacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaacc 253  Q
    |||||| ||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39379687 ttgatttactacattcgggacgagtttgagtatgagttcggg-tgggtacttttatcctcattacccgtcccgtacccgtgttttgagatcgggaaaacc 39379589  T
Q  254 catacccaaactcaatcaaagcggaaaaaatcgtcaatttagacttggttcaggcaagtatccacatgtatgtgttttgctgcgatgtctagttgttttg 353  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||||    
T  39379588 catacccaaactcaaccaaagcgggaaaaatcgtcaatttagacttggttctggcaagtatccacatgtatgggttttgttgcaatgtctagttgttttg 39379489  T
Q  354 cacttat 360  Q
    |||||||    
T  39379488 cacttat 39379482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 255
Target Start/End: Complemental strand, 8545508 - 8545355
Alignment:
Q  104 agtgaaatgatttaagatttggatttctatttatacagaagga-taataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggta 202  Q
    |||||||||||||| | ||||||||||| |||||| | ||||| |  ||||||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  8545508 agtgaaatgatttagggtttggatttctgtttatataaaaggagttgtaaattgattttctacatttgggacgagtttgagtatgggttcggggtgggta 8545409  T
Q  203 cttttgtcctcattacccgtcccgtacccgtgttttgagatcgg-gaaaaccca 255  Q
      | | ||| | |||| ||| || |||||||||||||| ||||| |||||||||    
T  8545408 tctatatccccgttactcgttccatacccgtgttttgaaatcggagaaaaccca 8545355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 98 - 255
Target Start/End: Original strand, 30903969 - 30904127
Alignment:
Q  98 tgtgtaagtgaaatgatttaagatttggatttctatttatacagaagga-taataaattgattcactacattcgggacgagtttgagtatgggttcgggg 196  Q
    ||||| |||||||||||||||| ||| | |||||||||||| | || |  |||||||||||||  |||||||||||||   |||| ||||||||  ||||    
T  30903969 tgtgtgagtgaaatgatttaaggttttggtttctatttatataaaatgtgtaataaattgattttctacattcgggactgatttgggtatgggtatgggg 30904068  T
Q  197 tgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaaccca 255  Q
    ||||||||| | ||  ||||||||||| |||||||||||||||| |||| | |||||||    
T  30904069 tgggtacttatatctccattacccgtctcgtacccgtgttttgaaatcgaggaaaccca 30904127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 32303050 - 32303149
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | | | ||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  32303050 tacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccataccca 32303149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 98 - 239
Target Start/End: Original strand, 28345414 - 28345556
Alignment:
Q  98 tgtgtaagtgaaatgatttaagatttggatttctatttatacagaagga-taataaattgattcactacattcgggacgagtttgagtatgggttcgggg 196  Q
    ||||| ||||||||||||||  |||| | |||||||||||| | ||||  ||||| ||| |||  |||||||| |||| |||||| ||||||||||||||    
T  28345414 tgtgtgagtgaaatgatttagaatttcggtttctatttatataaaaggggtaatatatttattttctacattcaggacaagtttgggtatgggttcgggg 28345513  T
Q  197 tgggtacttttgtcctcattacccgtcccgtacccgtgttttg 239  Q
    ||||| | | | ||||| |||||| ||| ||||||||||||||    
T  28345514 tgggtgcctatatcctcgttacccatcctgtacccgtgttttg 28345556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 251
Target Start/End: Complemental strand, 30481520 - 30481432
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    ||||||||||||||||||| ||||||||||||||||||||| | | |||||||||| |||| | ||| ||| |||||| ||| ||||||    
T  30481520 tacattcgggacgagtttgggtatgggttcggggtgggtacctatatcctcattactcgtctcatactcgtattttgaaatcaggaaaa 30481432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 24927938 - 24928037
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | | | ||||||||| | ||||||||||| |||||| |||||||||||||||||    
T  24927938 tacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagatcagggaaaacccataccca 24928037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 251
Target Start/End: Original strand, 29918530 - 29918684
Alignment:
Q  98 tgtgtaagtgaaatgatttaagatttggatttctatttatacagaag-gataataaattgattcactacattcgggacgagtttgagtatgggttcgggg 196  Q
    ||||| |||||||||||||| | ||||  |||||||||||| | ||| | |||||||||||||   |||||| |||||| ||||| |||||| |||||||    
T  29918530 tgtgtgagtgaaatgatttagggtttgagtttctatttatataaaagaggtaataaattgattttttacatttgggacgggtttgtgtatggtttcgggg 29918629  T
Q  197 tgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    ||||||| | | || |  |||||||| | ||||  ||||||||| ||||||||||    
T  29918630 tgggtacatatatctttgttacccgttctgtacatgtgttttgaaatcgggaaaa 29918684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 36274932 - 36275073
Alignment:
Q  64 aagtgggtgtcttgtgaaagaccgagacatcgattgtgtaagtgaaatgatttaagatttggatttctatttatacagaa-ggataataaattgattcac 162  Q
    ||||| ||||| | |||||||||||||| | || ||||| ||||||||||||| ||  |||| |||||||||||| | || ||||| ||||||||||       
T  36274932 aagtgagtgtcatctgaaagaccgagactttgactgtgtgagtgaaatgattt-agggttgggtttctatttatataaaagggatagtaaattgattttt 36275030  T
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtactt 205  Q
    ||||||||||||  ||||  |||||||||||||||| ||||||    
T  36275031 tacattcgggacatgtttaggtatgggttcggggtgagtactt 36275073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 45236054 - 45236160
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| || ||  |||||||||||||||||||| | | | | ||||||||||||| |||||||||||||| ||| |||||||| ||||||||    
T  45236054 tacatttgggacgggtatggatatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcagggaaaactcataccca 45236153  T
Q  262 aactcaa 268  Q
     ||||||    
T  45236154 tactcaa 45236160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 27932402 - 27932501
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| ||||||  | |||||||||||||||||||||||| | | | | | |||| |||||| |||||||||||||| ||| |||||||||||||||||    
T  27932402 tacatttgggacggatatgagtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaaatcggggaaaacccataccca 27932501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 1012610 - 1012683
Alignment:
Q  165 cattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgtttt 238  Q
    ||||||||||||||||| ||||||||||||||||||||| | | | | ||||||||||||| ||| | ||||||    
T  1012610 cattcgggacgagtttgggtatgggttcggggtgggtacctatatacccattacccgtcccatactcatgtttt 1012683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 261
Target Start/End: Original strand, 1063511 - 1063595
Alignment:
Q  178 tttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg-aaaacccataccca 261  Q
    |||| ||||| ||||||||||||||||| | | | | ||| ||||||| |||||||||||||| |||||| ||||||||||||||    
T  1063511 tttgggtatgagttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcgggaaaaacccataccca 1063595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 261
Target Start/End: Original strand, 17469251 - 17469343
Alignment:
Q  170 gggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| ||||| ||||||||| ||||||||||| | | | | | ||||||||||| |||||||||||||| ||| ||||||||||| |||||    
T  17469251 gggacgggtttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaaccca 17469343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 29108921 - 29108822
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg-aaaacccataccca 261  Q
    |||||| |||||| || || ||||||||||||||||||||| | | | | | ||||||||||| ||||| |||||| | |||||| ||||||||||||||    
T  29108921 tacatttgggacgggtatgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgttttaaaatcgggaaaaacccataccca 29108822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 332
Target Start/End: Complemental strand, 11255051 - 11254937
Alignment:
Q  219 ccgtcccgtacccgtgttttgagatcgggaaaacccatacccaaactcaatcaaagcggaaaaaa-tcgtcaatttagacttggttcaggcaagtatcca 317  Q
    ||||||| ||||||||||| || | |||||||||||||||||||||  | ||||| |||||||||  |||||| || || ||||||| | || ||| ||     
T  11255051 ccgtcccatacccgtgtttggaaagcgggaaaacccatacccaaacctagtcaaaacggaaaaaacccgtcaaattggatttggttcggacaggtaaccg 11254952  T
Q  318 catgtatgtgttttg 332  Q
    |||||||| ||||||    
T  11254951 catgtatgggttttg 11254937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 304
Target Start/End: Complemental strand, 33631978 - 33631861
Alignment:
Q  183 gtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaacccatacccaaactcaatcaaagc-ggaaaa 281  Q
    ||||||||| ||||||||||||| | ||| |||||| |||||| ||||| |||||||||||| || |||     | ||||| ||| ||||||| ||||||    
T  33631978 gtatgggtttggggtgggtacttatatccccattactcgtcccatacccatgttttgagatcaggtaaa-----atccaaattcagtcaaagcgggaaaa 33631884  T
Q  282 aatcgtcaatttagacttggttc 304  Q
    |  |||||||||||| |||||||    
T  33631883 acccgtcaatttagatttggttc 33631861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 283
Target Start/End: Original strand, 34777070 - 34777176
Alignment:
Q  178 tttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg-aaaacccatacccaaactcaatcaaagcg 276  Q
    |||| ||||||||||||||||||||| |   | |   |||| ||| || ||||||||||||||||||||| ||||||||||||||||| || ||||| ||    
T  34777070 tttgggtatgggttcggggtgggtacctaaatacctgttactcgttccatacccgtgttttgagatcgggaaaaacccatacccaaacccagtcaaaacg 34777169  T
Q  277 gaaaaaa 283  Q
    | |||||    
T  34777170 ggaaaaa 34777176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 96 - 190
Target Start/End: Complemental strand, 6388672 - 6388577
Alignment:
Q  96 attgtgtaagtgaaatgatttaagatttggatttctatttatacagaa-ggataataaattgattcactacattcgggacgagtttgagtatgggt 190  Q
    ||||||| |||||||||||||| | ||||| ||||| |||||| | || || |||||||||||||  |||||||| ||| | ||||||| ||||||    
T  6388672 attgtgtgagtgaaatgatttagggtttgggtttctgtttatataaaatgggtaataaattgattttctacattcaggatgggtttgagcatgggt 6388577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 247
Target Start/End: Complemental strand, 9476150 - 9476028
Alignment:
Q  126 atttctatttatacagaagga-taataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcc 224  Q
    ||||||||||||| | ||||  |||||| || |||  |||||||||||| | ||||| ||||||||||| |||||||| || | ||| | ||||  ||||    
T  9476150 atttctatttatatataaggggtaataatttaattttctacattcgggatgggtttgggtatgggttcgaggtgggtatttatatccccgttacttgtcc 9476051  T
Q  225 cgtacccgtgttttgagatcggg 247  Q
    |||| |||| |||||| ||||||    
T  9476050 cgtatccgttttttgaaatcggg 9476028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 35215555 - 35215617
Alignment:
Q  193 ggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaaccca 255  Q
    ||||||||||| | | | ||| ||||||||| | |||||||||||||| ||||||||||||||    
T  35215555 ggggtgggtacctatatactcgttacccgtctcatacccgtgttttgaaatcgggaaaaccca 35215617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 2183706 - 2183622
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgg 246  Q
    |||||||||||  | ||||||||||| ||||||||||||||| | | ||  |||||||  || ||||||||| |||||| |||||    
T  2183706 ctacattcgggtagggtttgagtatgagttcggggtgggtacatatatctccattacctctctcgtacccgtattttgaaatcgg 2183622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 2189947 - 2189907
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggta 202  Q
    |||||||||||  | ||||||||||||||||||||||||||    
T  2189947 ctacattcgggtagggtttgagtatgggttcggggtgggta 2189907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 15173927 - 15173891
Alignment:
Q  215 ttacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  15173927 ttacccgtcccgtacccgtattttgaaatcgggaaaa 15173891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 104 - 240
Target Start/End: Original strand, 42907822 - 42907958
Alignment:
Q  104 agtgaaatgatttaagatttggatttctatttatacagaaggataataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtac 203  Q
    |||||||||||||| | ||||  |||||||||||| | |||  || ||||||||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  42907822 agtgaaatgatttagggtttgagtttctatttatataaaagagtagtaaattgattttctacattcgggacgagtttgggtatgggctcggggtgggtac 42907921  T
Q  204 ttttgtcctcattacccgtcccgtacccgtgttttga 240  Q
     | | ||| |||||| ||||||||| |||||||||||    
T  42907922 ctatatccccattactcgtcccgtatccgtgttttga 42907958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 96 - 246
Target Start/End: Original strand, 36306712 - 36306863
Alignment:
Q  96 attgtgtaagtgaaatgatttaagatttggatttctatttatacagaa-ggataataaattgattcactacattcgggacgagtttgagtatgggttcgg 194  Q
    |||||||||||||||||||||| ||||| |||||||||||||| | || || |||||||||||||  |||||||||||||| |||||||| | | |||||    
T  36306712 attgtgtaagtgaaatgatttatgatttcgatttctatttatataaaaggggtaataaattgattttctacattcgggacgggtttgagtgtagcttcgg 36306811  T
Q  195 ggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgg 246  Q
    | | ||||| | | ||| | ||| ||||| | |||||||||||||| |||||    
T  36306812 gttaggtacctatatccccgttaaccgtctcatacccgtgttttgaaatcgg 36306863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 5902714 - 5902603
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | | | ||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  5902714 tacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccataccca 5902615  T
Q  262 aactcaatcaaa 273  Q
    ||| || |||||    
T  5902614 aacccagtcaaa 5902603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 6382372 - 6382273
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgg-gaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | | | ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  6382372 tacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccataccca 6382273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 11122969 - 11122870
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgg-gaaaacccataccca 261  Q
    |||||| |||||| ||||||||||||||||||||||||||| | | | | | ||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  11122969 tacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacccataccca 11122870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 251
Target Start/End: Complemental strand, 21956971 - 21956826
Alignment:
Q  106 tgaaatgatttaagatttggatttctatttatacagaaggataataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtactt 205  Q
    |||||||||||| | ||||| ||| |||||||| | |||| |||||||||||||  |||||||||  ||||||||| |||||||||||||||||| || |    
T  21956971 tgaaatgatttagggtttgggtttttatttatataaaagggtaataaattgattttctacattcgtaacgagtttgggtatgggttcggggtgggcacct 21956872  T
Q  206 ttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
     | ||| | |||| | | ||||||||||||||| | ||||| ||||    
T  21956871 atatccccgttactcattccgtacccgtgttttaaaatcggaaaaa 21956826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 7608965 - 7609064
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | | | ||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  7608965 tacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccataccca 7609064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 44317530 - 44317629
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | | | ||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  44317530 tacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccataccca 44317629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 25265315 - 25265225
Alignment:
Q  95 gattgtgtaagtgaaatgatttaagatttggatttctatttatacagaaggataataaattgattcactacattcgggacgagtttgagta 185  Q
    |||||||| ||| ||||||||||  |||||  |||||||||||| ||||||||||||||||||||  ||||||||| || |||||||||||    
T  25265315 gattgtgtgagtaaaatgatttagaatttgagtttctatttatatagaaggataataaattgattttctacattcgagatgagtttgagta 25265225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 251
Target Start/End: Complemental strand, 1866650 - 1866561
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    |||||||||||  ||||||| ||||||||||||||||| ||| | | ||| ||||||||||| ||||||||| |||||| ||||||||||    
T  1866650 ctacattcgggtagagtttgggtatgggttcggggtggatacatatatccgcattacccgtctcgtacccgtattttgaaatcgggaaaa 1866561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 99 - 251
Target Start/End: Original strand, 25941068 - 25941221
Alignment:
Q  99 gtgtaagtgaaatgatttaagatttggatttctatttatacagaagga-taataaattgattcactacattcgggacgagtttgagtatgggttcggggt 197  Q
    |||| |||||| ||||||| |  |||| |||||||||||| | ||||  | |||||||||||  |||||| || |||  ||||| |||||||||||||||    
T  25941068 gtgtgagtgaattgatttaggccttgggtttctatttatataaaaggggttataaattgattttctacatccgagacatgtttgggtatgggttcggggt 25941167  T
Q  198 gggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    |||||| | | | | | ||||| |||||||||||||||||||| ||||||||||    
T  25941168 gggtacctatcttcccgttacctgtcccgtacccgtgttttgaaatcgggaaaa 25941221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 283
Target Start/End: Original strand, 16575047 - 16575222
Alignment:
Q  104 agtgaaatgatttaagatttggatttctatttatac-agaaggataataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggta 202  Q
    |||||||||||||| ||||||  ||||||||||||  | |||| ||||||||| |||   ||||||   |||||||||| |||| ||||||| |||||||    
T  16575047 agtgaaatgatttatgatttgagtttctatttatattaaaagggtaataaattaattttttacatttaagacgagtttgggtataggttcggagtgggta 16575146  T
Q  203 cttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaacccatacccaaactcaatcaaagcggaaaaaa 283  Q
    ||| | ||||| ||| || ||||||||||| ||||| | |||| | |     |||||||||||||||||||||||| ||||    
T  16575147 cttatatcctcgttatccatcccgtacccgcgttttaaaatcgagga-----atacccaaactcaatcaaagcggagaaaa 16575222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 11028068 - 11028167
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||  ||||| ||||| ||||||||||||||| | | | | | ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  11028068 tacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccataccca 11028167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 12075768 - 12075654
Alignment:
Q  127 tttctatttatacagaa-ggataataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtccc 225  Q
    |||||||||||| | || || |||||||||||||  |||||||| ||||||||||||||| | ||| ||||||||||| | | |||  |||||| ||| |    
T  12075768 tttctatttatataaaatgggtaataaattgattttctacattccggacgagtttgagtacgagtttggggtgggtacatatctccctattacctgtcac 12075669  T
Q  226 gtacccgtgttttga 240  Q
    |||||||||||||||    
T  12075668 gtacccgtgttttga 12075654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 21544588 - 21544662
Alignment:
Q  177 gtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    ||||| ||||||||||||||||||||| | | ||| ||||||| ||||||||||||| |||||| ||||||||||    
T  21544588 gtttgggtatgggttcggggtgggtacatatatccccattacctgtcccgtacccgtattttgaaatcgggaaaa 21544662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 259
Target Start/End: Complemental strand, 47550453 - 47550356
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccatacc 259  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | |   ||||||||||| |||||||||||||||||| |||||||| ||||||    
T  47550453 tacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaactcatacc 47550356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 31918658 - 31918562
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccatac 258  Q
    |||||| |||||| ||||| ||||||||||||||||||||  | | | | |||||| |||||| ||||||||||| |||||| ||||||||||||||    
T  31918658 tacatttgggacgggtttgggtatgggttcggggtgggtaactatatacccattactcgtcccatacccgtgtttcgagatcggggaaaacccatac 31918562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 268
Target Start/End: Complemental strand, 19883169 - 19883050
Alignment:
Q  150 taaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-ggga 248  Q
    ||||||||||   ||||||||||||||||||| |||| |||||||||||| ||| | | ||| | |||||| ||||||| ||||||||| | ||| ||||    
T  19883169 taaattgattttatacattcgggacgagtttgtgtatcggttcggggtggatacctatatccccgttacccttcccgtatccgtgttttaaaatcgggga 19883070  T
Q  249 aaacccatacccaaactcaa 268  Q
    ||||||| || || ||||||    
T  19883069 aaacccaaactcatactcaa 19883050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 43893223 - 43893321
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaacccataccca 261  Q
    |||||| |||||| ||||| |||||  |||||||||| ||| | | | | | ||||||||||| ||||||||||| ||||||||| |||||||||||||    
T  43893223 tacatttgggacgggtttgggtatgaattcggggtggatacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaacccataccca 43893321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 261
Target Start/End: Complemental strand, 1724408 - 1724311
Alignment:
Q  165 cattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||||||||| ||||| ||||||||||||||||||||| | | |   | ||||||||||| ||||| |||||||| ||| ||||||||||| |||||    
T  1724408 cattcgggacgggtttgggtatgggttcggggtgggtacctatataaccgttacccgtcccatacccatgttttgaaatcggggaaaacccaaaccca 1724311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 4741352 - 4741241
Alignment:
Q  127 tttctatttatacagaa-ggataataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtccc 225  Q
    |||||||||||| | || |||||||||||||||| | ||||||||| ||| ||||  ||||||||||||||||||||||| | |||   ||| |||||||    
T  4741352 tttctatttatataaaatggataataaattgattta-tacattcggaacgggtttttgtatgggttcggggtgggtacttatatccctgttatccgtccc 4741254  T
Q  226 gtacccgtgtttt 238  Q
     ||||| ||||||    
T  4741253 atacccatgtttt 4741241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 162 - 261
Target Start/End: Complemental strand, 14606026 - 14605926
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgg-gaaaacccataccc 260  Q
    |||||||| ||  ||||||| ||||||||||||||||||||| | | |||   ||||||||| ||||||||| |||||| ||||| ||||||||| ||||    
T  14606026 ctacattcaggtagagtttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaaccc 14605927  T
Q  261 a 261  Q
    |    
T  14605926 a 14605926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 25298992 - 25298845
Alignment:
Q  104 agtgaaatgatttaagatttggatttctatttatacagaagga-taataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggta 202  Q
    |||||||||||||| || || || ||||||||||| | ||||  | |||||||||||  | ||||| || ||| ||||| |||||||||||||||||  |    
T  25298992 agtgaaatgattta-gagtttgagttctatttataaaaaaggggtgataaattgattttcaacatttggtacgggtttgggtatgggttcggggtggaca 25298894  T
Q  203 cttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
      | | ||| |||||||| ||||||||||||||||||| ||| ||||||    
T  25298893 gctatatccccattacccatcccgtacccgtgttttgaaatccggaaaa 25298845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 29527821 - 29527905
Alignment:
Q  177 gtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccc 260  Q
    ||||| ||||||||||||||||||||| | | ||| | ||||||||| ||||||||| |||||| ||| ||||||||||| ||||    
T  29527821 gtttgggtatgggttcggggtgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaacccaaaccc 29527905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 162 - 261
Target Start/End: Original strand, 47103732 - 47103832
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgaga-tcgggaaaacccataccc 260  Q
    |||||||||||  | ||||| ||||||||||||||||||||| | | ||| | ||||||| ||||||||||| |||||| | | ||||||||||| ||||    
T  47103732 ctacattcgggtagggtttgggtatgggttcggggtgggtacatatatccgcgttacccgccccgtacccgtattttgaaattggggaaaacccaaaccc 47103831  T
Q  261 a 261  Q
    |    
T  47103832 a 47103832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 55826723 - 55826627
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccatac 258  Q
    |||||| |||||| |||||  |||||||||||||||||||| | | | | | ||||||||||| |||| |||||| |||||| ||||||||||||||    
T  55826723 tacatttgggacgggtttggatatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgtttcgagatcggggaaaacccatac 55826627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 9281044 - 9280949
Alignment:
Q  109 aatgatttaagatttggatttctatttatacagaagg-ataataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtac 203  Q
    ||||||||| | |||| |||||||| |||| | |||| |||||||||| |||  ||| |||| |||| |||||||||||| |||||||||||||||    
T  9281044 aatgatttagggtttgaatttctatctatataaaagggataataaatttattttctatattcaggacaagtttgagtatgagttcggggtgggtac 9280949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 21423856 - 21423955
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgaga-tcgggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||| ||||||||||| | | | | | ||||||||| | ||||||||||| |||| | |||||||||||||||||    
T  21423856 tacatttgggacgggtttgtgtatgggtttggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagattggggaaaacccataccca 21423955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 31752451 - 31752550
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| || || |||||||||||||||||| || | | | ||| |||| |||| | |||||||||||||| ||| |||||||||||||||||    
T  31752451 tacatttgggacgggtatgggtatgggttcggggtgggaacctatatactcgttactcgtctcatacccgtgttttgaaatcggggaaaacccataccca 31752550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 273
Target Start/End: Original strand, 32585484 - 32585595
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgg-gaaaacccataccca 261  Q
    |||||| |||||| ||||| |||||||||| |||||||||| | | | | | ||||| ||||| |||||||||||||| ||||| |||||  ||||||||    
T  32585484 tacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcggagaaaattcataccca 32585583  T
Q  262 aactcaatcaaa 273  Q
    ||| || |||||    
T  32585584 aacccagtcaaa 32585595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 37384203 - 37384303
Alignment:
Q  99 gtgtaagtgaaatgatttaagatttggatttctatttatacagaa-ggataataaattgattcactacattcgggacgagtttgagtatgggttcggggt 197  Q
    |||| |||||||||||||| | |||| | ||||||||||| | || ||||||||||||||||  ||| ||| |||||| ||||| ||||||||| |||||    
T  37384203 gtgtgagtgaaatgatttagggtttgaacttctatttatataaaagggataataaattgatt-tctatatttgggacgggtttgtgtatgggtttggggt 37384301  T
Q  198 gg 199  Q
    ||    
T  37384302 gg 37384303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 3737791 - 3737859
Alignment:
Q  183 gtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    ||||||||||||| ||||||| | |  |||| ||||||||||| |||||||||||||| || |||||||    
T  3737791 gtatgggttcgggatgggtacatataacctcgttacccgtcccatacccgtgttttgaaattgggaaaa 3737859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 21714143 - 21714035
Alignment:
Q  96 attgtgtaagtgaaatgatttaagatttggatttctatttatacagaag-gataataaattgattcactacattcgggacgagtttgagtatgggttcgg 194  Q
    |||||||||||||||||||||| | ||||  |||||||||||| | ||| | ||||||||| |||  ||||||| | |||||||||  ||||| |||  |    
T  21714143 attgtgtaagtgaaatgatttagggtttgagtttctatttatataaaagaggtaataaattaattttctacatttgagacgagtttaggtatgagtttag 21714044  T
Q  195 ggtgggtac 203  Q
    |||||||||    
T  21714043 ggtgggtac 21714035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 238
Target Start/End: Complemental strand, 33516237 - 33516097
Alignment:
Q  99 gtgtaagtgaaatgatttaagatttggatttctatttatacagaagga-taataaattgattcactacattcgggacgagtttgagtatgggttcggggt 197  Q
    |||| |||||||||||||| | ||||  ||| |||||||| | ||||  ||||| |||||||   |||||| | |||| ||||| |||| ||||||||||    
T  33516237 gtgtgagtgaaatgatttagggtttgagtttttatttatataaaaggggtaatacattgattttttacatttgagacgggtttgggtataggttcggggt 33516138  T
Q  198 gggtacttttgtcctcattacccgtcccgtacccgtgtttt 238  Q
    |||||||| | |||   |||||| || ||||||||||||||    
T  33516137 gggtacttatatccctgttacccatctcgtacccgtgtttt 33516097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 17113162 - 17113096
Alignment:
Q  104 agtgaaatgatttaagatttggatttctatttatacagaaggataataaattgattcactacattcg 170  Q
    |||||||||||||||||||||| ||| ||||||||   |||  |||||||||||||  |||||||||    
T  17113162 agtgaaatgatttaagatttgggtttttatttatatgaaagagtaataaattgattttctacattcg 17113096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 26564828 - 26564910
Alignment:
Q  165 cattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg 247  Q
    |||| |||||| ||||| |||||| |||||||||||||| | | | | | ||||||||||| |||||| ||||||| ||||||    
T  26564828 catttgggacgggtttgggtatggtttcggggtgggtacctatatacccgttacccgtcccatacccgcgttttgaaatcggg 26564910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 6482133 - 6482060
Alignment:
Q  165 cattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgtttt 238  Q
    |||| |||||| ||||| ||||||||||||||||||||| | | | | | |||| |||||| ||||||||||||    
T  6482133 catttgggacgggtttgggtatgggttcggggtgggtacatatataccctttactcgtcccatacccgtgtttt 6482060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 37107433 - 37107498
Alignment:
Q  190 ttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaaccca 255  Q
    |||||||||||||| | | | | | ||||||||||| |||||||||||||| || |||||||||||    
T  37107433 ttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaattgggaaaaccca 37107498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 37926535 - 37926583
Alignment:
Q  144 ggataataaattgattcactacattcgggacgagtttgagtatgggttc 192  Q
    |||||||||||| ||| ||||||||| ||| ||||||| ||||||||||    
T  37926535 ggataataaattaatttactacattcaggatgagtttgggtatgggttc 37926583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 43309530 - 43309566
Alignment:
Q  215 ttacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  43309530 ttacccgtcccatacccgtgttttgaaatcgggaaaa 43309566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 50375931 - 50375891
Alignment:
Q  245 gggaaaacccatacccaaactcaatcaaagcggaaaaaatc 285  Q
    |||||||||||| ||||||| |||||||||||| |||||||    
T  50375931 gggaaaacccatgcccaaacccaatcaaagcgggaaaaatc 50375891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 95 - 285
Target Start/End: Original strand, 6810078 - 6810264
Alignment:
Q  95 gattgtgtaagtgaaatgatttaagatttggatttctatttatacagaaggat-aataaattgattcactacattcgggacgagtttgagtatgggttcg 193  Q
    |||||||| |||||||| ||||||| ||||| |||||||| ||| | ||||   ||||||||||||  |  ||||||||| | ||||| |||||||||||    
T  6810078 gattgtgtgagtgaaatcatttaaggtttgggtttctattgatataaaaggggcaataaattgattttcaccattcgggatgggtttgggtatgggttcg 6810177  T
Q  194 gggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaacccatacccaaactcaatcaaagcggaaaaaatc 285  Q
    ||||| |||||| | ||||| |||||||| ||||||||||||| | | |||||| |||     ||||||||||| |||||||||||||||||    
T  6810178 gggtgagtacttatatcctcgttacccgttccgtacccgtgttctaaaatcggggaaa-----acccaaactcattcaaagcggaaaaaatc 6810264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 18452071 - 18451943
Alignment:
Q  78 tgaaagaccgagacatcgattgtgtaagtgaaatgatttaagatttggatttctatttatacagaagg-ataataaattgattcactacattcgggacga 176  Q
    |||||||||||||| |  | ||||| ||||||||||| ||||||| | ||||||||| ||| | |||| ||||||||||||||  ||||| |||||||||    
T  18452071 tgaaagaccgagactttaactgtgtgagtgaaatgatctaagattcgtatttctattaatataaaagggataataaattgattttctacaatcgggacga 18451972  T
Q  177 gtttgagtatgggttcggggtgggtactt 205  Q
    |||||| |||| |||||||||||||||||    
T  18451971 gtttgattatgagttcggggtgggtactt 18451943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 4920815 - 4920914
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||| ||| | | | | | ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  4920815 tacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccataccca 4920914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 98 - 251
Target Start/End: Original strand, 17153092 - 17153246
Alignment:
Q  98 tgtgtaagtgaaatgatttaagatttggatttctatttatacagaagga-taataaattgattcactacattcgggacgagtttgagtatgggttcgggg 196  Q
    ||||| |||||||| ||||| | |||||||||||||||||  ||||||  |||||||||||||  |||||||||||||| ||||| ||||||||| |||     
T  17153092 tgtgtgagtgaaattatttaggttttggatttctatttatctagaaggggtaataaattgattttctacattcgggacgggtttgggtatgggtttggga 17153191  T
Q  197 tgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    || |||| | | || |  ||| ||||||||||||| |||||| | ||||| ||||    
T  17153192 tgagtacatatatcatagttatccgtcccgtacccatgttttaaaatcggaaaaa 17153246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 108 - 308
Target Start/End: Complemental strand, 16311448 - 16311240
Alignment:
Q  108 aaatgatttaagatttggatttctatttatacagaagg-ataataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtacttt 206  Q
    |||||||||| | ||||| |||||||||||| | |||| ||||||||||||||  | ||||||| |||  |||||| |||||||||||||||||||| |     
T  16311448 aaatgatttagggtttgg-tttctatttatataaaagggataataaattgattttcaacattcgagacaggtttgaatatgggttcggggtgggtaccta 16311350  T
Q  207 tgtcctcattacccgtcccgtacccgtgttttgagatcggga-------aaacccatacccaaactcaatcaaagc-ggaaaaaatcgtcaatttagact 298  Q
    | |||   ||| ||||| ||||| |||||||||| ||||| |       |||| |||| |||||| |||||||||| |||||||| |||||| ||||  |    
T  16311349 tatccctgttatccgtctcgtactcgtgttttgaaatcggaaaaaactcaaactcatatccaaacccaatcaaagcgggaaaaaaccgtcaaattaggtt 16311250  T
Q  299 tggttcaggc 308  Q
    ||||||||||    
T  16311249 tggttcaggc 16311240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 22695001 - 22694903
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | | | |||  |||||| ||||||| ||||||||||||| |||||||||||||    
T  22695001 tacatttgggacgggtttgggtatgggttcggggtgggtacctctatacccgttagtcgtcccatacccgtattttgagatcggggaaacccataccca 22694903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 261
Target Start/End: Original strand, 40517802 - 40517894
Alignment:
Q  170 gggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| ||||||||||||||||||||||||||  | | | | | |||||| |||| ||||||||||||| |||| |||||||||||||||||    
T  40517802 gggacgggtttgagtatgggttcggggtgggtaactatatacccgttacccatcccatacccgtgttttgggatcggggaaaacccataccca 40517894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 27900516 - 27900413
Alignment:
Q  148 aataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg 247  Q
    ||||||||||||   |||||||||| ||  |||| ||||||||||| | ||||||| | | ||| ||||||||||||| ||||| |||||||| ||||||    
T  27900516 aataaattgattttatacattcggggcggatttgggtatgggttcgagatgggtacctatatccacattacccgtcccatacccatgttttgaaatcggg 27900417  T
Q  248 aaaa 251  Q
    ||||    
T  27900416 aaaa 27900413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 285
Target Start/End: Original strand, 35311811 - 35311931
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaacccatacccaa 262  Q
    |||||| |||||| || ||||||||||||||| |||||||| | | |     ||||||||||| |||||||||||||| |||||  | | ||||||||||    
T  35311811 tacatttgggacgggtatgagtatgggttcggagtgggtacctatatatctgttacccgtcccatacccgtgttttgaaatcgg--atatccatacccaa 35311908  T
Q  263 actcaatcaaagcggaaaaaatc 285  Q
    ||||| ||||| |||||||||||    
T  35311909 actcagtcaaaacggaaaaaatc 35311931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 10127070 - 10127162
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | |       ||||||||| |||||||||||||||||| |||||||||||||||||    
T  10127070 tacatttgggacgggtttgggtatgggttcggggtgggtacctatat-------acccgtcccatacccgtgttttgagatcggggaaaacccataccca 10127162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 24207766 - 24207807
Alignment:
Q  249 aaacccatacccaaactcaatcaaagcggaaaaaatcgtcaa 290  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  24207766 aaacccatacccaaactcaatcaaagcgggaaaaatcgtcaa 24207807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 282
Target Start/End: Original strand, 29664947 - 29665084
Alignment:
Q  150 taaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgg-ga 248  Q
    ||||||||||   ||||||||||||| ||||| ||||| |||||  |||||||| | | ||| | |||||| ||  ||||||||||||||| ||||| ||    
T  29664947 taaattgattttgtacattcgggacgggtttgggtatgagttcgaagtgggtacctatatccccgttacccatcatgtacccgtgttttgaaatcggaga 29665046  T
Q  249 ----aaacccatacccaaactcaatcaaagcggaaaaa 282  Q
        |||| ||||| |||||||||||||||||||||||    
T  29665047 acccaaactcatacacaaactcaatcaaagcggaaaaa 29665084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 35194090 - 35194014
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgtttt 238  Q
    |||||||||||||| ||||||||||| ||| ||||||||||| | | | | | ||||||||||| ||||||||||||    
T  35194090 ctacattcgggacgggtttgagtatgagtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttt 35194014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 4583108 - 4583207
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| || || ||||||||| |||||||| || | | | | | ||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  4583108 tacatttgggacgggtatgggtatgggtttggggtgggaacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccataccca 4583207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 5908788 - 5908689
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||| |||||| |||| | | | | | ||||||||||| ||||||||||| |||||| |||||||| ||||||||    
T  5908788 tacatttgggacgggtttgggtatgggtttggggtgtgtacatatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcataccca 5908689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 12773922 - 12773828
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgg-gaaaaccca 255  Q
    |||||||||||  | ||||||||||||||||| ||||||||| | | ||  | ||| ||||||||||||||| |||||| ||||| |||||||||    
T  12773922 ctacattcgggtagggtttgagtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaaccca 12773828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 28569106 - 28569037
Alignment:
Q  178 tttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg 247  Q
    |||| ||||||||||||||||||||| | | ||| | ||||||||||||||||||  |||||| ||||||    
T  28569106 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcggg 28569037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 7350563 - 7350471
Alignment:
Q  108 aaatgatttaagatttggatttctatttatacagaag-gataataaattgattcactacattcgggacgagtttgagtatgggttcggggtgg 199  Q
    |||||||||| | ||| |||| ||||||||| | ||| ||||||||||| |||  ||||||| | |||| |||| ||||||||||||||||||    
T  7350563 aaatgatttagggtttcgattactatttatataaaagcgataataaattaattttctacatttgagacgggtttaagtatgggttcggggtgg 7350471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 12457437 - 12457537
Alignment:
Q  95 gattgtgtaagtgaaatgatttaagatttggatttctatttatacagaagga-taataaattgattcactacattcgggacgagtttgagtatgggttcg 193  Q
    |||||||| ||||||||||||||   ||| | ||||||||||||   ||||  |||||||||||||  |||||||||||||| ||||| ||||| |||||    
T  12457437 gattgtgtgagtgaaatgatttagactttaggtttctatttatattaaaggggtaataaattgattttctacattcgggacgggtttgggtatgagttcg 12457536  T
Q  194 g 194  Q
    |    
T  12457537 g 12457537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 258
Target Start/End: Original strand, 15890196 - 15890291
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgg-gaaaacccatac 258  Q
    |||||| |||||| || || ||||||||||||| ||||||| | | | | | ||||||||||| |||||||||||||| ||||| ||||||||||||    
T  15890196 tacatttgggacgggtatgggtatgggttcggg-tgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaacccatac 15890291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 2681219 - 2681298
Alignment:
Q  177 gtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaaccca 255  Q
    ||||| ||||||||||||||||| ||||  | ||| |||||||| ||||||||| || |||||| ||| |||||||||||    
T  2681219 gtttgggtatgggttcggggtggatactcatatccccattacccatcccgtacctgtattttgaaatcggggaaaaccca 2681298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 33728049 - 33728002
Alignment:
Q  215 ttacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||||||    
T  33728049 ttacccgtcccatacccgtgttttgagatcggggaaaatccataccca 33728002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 12712658 - 12712564
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgg-gaaaaccca 255  Q
    |||||||||||  | ||||| ||||||||||| ||||||||| | | ||  | ||| ||||||||||||||| |||||| ||||| |||||||||    
T  12712658 ctacattcgggtagggtttgggtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaaccca 12712564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 38972925 - 38972999
Alignment:
Q  177 gtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    ||||||||||||||||||||||||||| | | | | | |||||  |||| ||||| |||||||| ||||||||||    
T  38972925 gtttgagtatgggttcggggtgggtacctatattcccgttacctatcccatacccatgttttgaaatcgggaaaa 38972999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 10822606 - 10822533
Alignment:
Q  183 gtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgg-gaaaaccca 255  Q
    ||||||||||||||||||||| | |  || | ||||||||||  |||||||||||||| ||||| |||||||||    
T  10822606 gtatgggttcggggtgggtacatataaccccgttacccgtcctatacccgtgttttgaaatcggagaaaaccca 10822533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 15564624 - 15564657
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggg 195  Q
    |||||||||||||||||||||||||| |||||||    
T  15564624 ctacattcgggacgagtttgagtatgagttcggg 15564657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 23045092 - 23045007
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg 247  Q
    |||||||||||  | ||||  ||||||||||||||||||||| | | ||  | |||||| |||||||||||| |||||| ||||||    
T  23045092 ctacattcgggtagggttttggtatgggttcggggtgggtacatatatctccgttacccatcccgtacccgtattttgaaatcggg 23045007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 255
Target Start/End: Complemental strand, 32575054 - 32574945
Alignment:
Q  147 taataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-g 245  Q
    ||||||||||||   ||||||||||| || ||||| || |||||||||| ||||||| | | |||   |||||| ||||||| | ||||||||| ||| |    
T  32575054 taataaattgatattctacattcggggcgggtttgggtttgggttcgggatgggtacatatatccatgttacccatcccgtatctgtgttttgaaatcgg 32574955  T
Q  246 ggaaaaccca 255  Q
    ||||||||||    
T  32574954 ggaaaaccca 32574945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 457536 - 457476
Alignment:
Q  100 tgtaagtgaaatgatttaagatttggatttctatttatacagaagg-ataataaattgatt 159  Q
    |||||||||||||||||| ||||| | |||||||||||| | ||||  |||||||||||||    
T  457536 tgtaagtgaaatgatttaggattttggtttctatttatataaaaggtgtaataaattgatt 457476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 20973581 - 20973497
Alignment:
Q  178 tttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||| ||||||||||||||||||||| | | | | | |||||| |||| |||||||||||  | ||| |||||||||||||||||    
T  20973581 tttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttgaaaatcggggaaaacccataccca 20973497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 44172615 - 44172721
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||||| | | | | ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  44172615 tacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccataccca 44172714  T
Q  262 aactcaa 268  Q
     ||||||    
T  44172715 tactcaa 44172721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 44179315 - 44179421
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||||| | | | | ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  44179315 tacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccataccca 44179414  T
Q  262 aactcaa 268  Q
     ||||||    
T  44179415 tactcaa 44179421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 23547041 - 23546930
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||||||||| ||||||||||||||||||||| | | | | | ||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  23547041 tacatttgggacgagtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccataccca 23546942  T
Q  262 aactcaatcaaa 273  Q
    ||| || |||||    
T  23546941 aacccagtcaaa 23546930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 49580053 - 49580152
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||||||||||||||| ||||||||| | | | ||| ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  49580053 tacatttgggacgggtttgagtatgggttcgaggtgggtacctatatactcgttacccgtcccatacccgtgttttgagatcggggaaaacccataccca 49580152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 163 - 264
Target Start/End: Complemental strand, 44953534 - 44953432
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||||||||| |||||||||| |||| | | | | | ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  44953534 tacatttgggacgggtttgagtatgagttcggggtgagtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccataccca 44953435  T
Q  262 aac 264  Q
    |||    
T  44953434 aac 44953432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 7469877 - 7469778
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | | | ||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  7469877 tacatttgggacgggtttgtgtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcagggaaaacccataccca 7469778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 4553162 - 4553267
Alignment:
Q  146 ataataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcg 245  Q
    ||||||||||||||   |||||||| |||| |||||||||||||||||||||| ||| || | |||  ||||||||| ||| |||| |||||||| ||||    
T  4553162 ataataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgtatttatatccctattacccgttccgcacccatgttttgaaatcg 4553261  T
Q  246 ggaaaa 251  Q
    ||||||    
T  4553262 ggaaaa 4553267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 104 - 240
Target Start/End: Complemental strand, 30904974 - 30904838
Alignment:
Q  104 agtgaaatgatttaagatttggatttctatttatacagaagga-taataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggta 202  Q
    |||||||||||| | | ||||| |||||||||||| | ||||  || ||||||||||  ||||||||| ||||  |||| ||||||||||||||||||||    
T  30904974 agtgaaatgattaagggtttgggtttctatttatataaaaggggtagtaaattgatttcctacattcgagacggatttgggtatgggttcggggtgggta 30904875  T
Q  203 cttttgtcctcattacccgtcccgtacccgtgttttga 240  Q
    | | | ||| |  |||||||||||||||||||||||||    
T  30904874 cctatatcc-ccgtacccgtcccgtacccgtgttttga 30904838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 44639263 - 44639362
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagat-cgggaaaacccataccca 261  Q
    |||||| || ||| ||||| ||||||||||||||||||||| | | | | | ||||||||||| |||||||||||||||||  |||||||||||||||||    
T  44639263 tacatttggaacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatatgggaaaacccataccca 44639362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 52198144 - 52198243
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg-aaaacccataccca 261  Q
    |||||| || ||| ||||| ||||||||||||||||||||| | | | | | ||||||||||| |||| |||||||||||||||| ||||||||||||||    
T  52198144 tacatttggaacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgttttgagatcgggaaaaacccataccca 52198243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 261
Target Start/End: Original strand, 29284332 - 29284424
Alignment:
Q  170 gggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg-aaaacccataccca 261  Q
    |||||| ||||| ||||||||||||| ||||||| | | | | | ||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  29284332 gggacgggtttgggtatgggttcgggctgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccataccca 29284424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 29842297 - 29842393
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaacccatacc 259  Q
    |||||| | |||| || |||||||||||||||||||||||| | | | | | ||||| ||||| |||||||||||| | ||||||||||||||||||    
T  29842297 tacatttgagacgggtatgagtatgggttcggggtgggtacctatattcccgttaccagtcccatacccgtgttttaaaatcgggaaaacccatacc 29842393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 258
Target Start/End: Original strand, 39728660 - 39728756
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcg-ggaaaacccatac 258  Q
    |||||| |||||| ||||| ||||||||||||||||||||||| | | | | |||||| |||| ||||||| ||||||||||| |||||||| ||||    
T  39728660 tacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccatcccatacccgtattttgagatcgaggaaaacctatac 39728756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 202
Target Start/End: Complemental strand, 772961 - 772854
Alignment:
Q  95 gattgtgtaagtgaaatgatttaagatttggatttctatttatacagaaggataataaattgattcactacattcgggacgagtttgagtatgggttcgg 194  Q
    |||||||| |||||||||||| ||| ||||  |||||||||||||| |||| |||||||||||||  ||| ||| |||||   |||| | ||| ||||||    
T  772961 gattgtgtgagtgaaatgattcaaggtttgagtttctatttatacaaaagggtaataaattgattttctatatttgggacatatttgggcatgagttcgg 772862  T
Q  195 ggtgggta 202  Q
    ||||||||    
T  772861 ggtgggta 772854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 39655372 - 39655273
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| | |||| ||||| ||||||||| ||||||||||| | | | |   ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  39655372 tacatttgagacgggtttgggtatgggtttggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacccataccca 39655273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 52572598 - 52572697
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcg-ggaaaacccataccca 261  Q
    |||||| |||||| | |||||||||| |||||||||||| | | | | | | ||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  52572598 tacatttgggacgggcttgagtatggattcggggtgggtccctatatacccgttacccgtcccatacccgtgttttgagatcgaggaaaactcataccca 52572697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 240
Target Start/End: Complemental strand, 3386019 - 3385878
Alignment:
Q  100 tgtaagtgaaatgatttaagatttggatttctatttatacagaa-ggataataaattgattcactacattcgggacgagtttgagtatgggttcggggtg 198  Q
    |||||||||||||||||| ||||| ||||| |||||||| | || || || |||| |||||   |||||| || ||| ||||  |||||| |||| ||||    
T  3386019 tgtaagtgaaatgatttaggatttcgatttttatttatagaaaagggttactaaaatgattttttacattaggtacgggttttggtatggattcgtggtg 3385920  T
Q  199 ggtacttttgtcctcattacccgtcccgtacccgtgttttga 240  Q
    | ||| | | ||||| ||||| ||||||||||||||||||||    
T  3385919 gctacctatatcctcgttacctgtcccgtacccgtgttttga 3385878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 261
Target Start/End: Complemental strand, 4016141 - 4016044
Alignment:
Q  165 cattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||||||||||||||| |||||||||||| |||||||| | | | | | ||| ||||||| ||||| |||||||| ||| ||||||||||| |||||    
T  4016141 cattcgggacgagtttgggtatgggttcggagtgggtacctatatacccgttatccgtcccatacccatgttttgaaatcggggaaaacccaaaccca 4016044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 53631896 - 53631933
Alignment:
Q  166 attcgggacgagtttgagtatgggttcggggtgggtac 203  Q
    ||||||||||||||||||||||||||||||||||||||    
T  53631896 attcgggacgagtttgagtatgggttcggggtgggtac 53631933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 40796206 - 40796146
Alignment:
Q  193 ggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaacc 253  Q
    ||||||||||| | | ||||||||||||||||||||||||| |||||| ||||| ||||||    
T  40796206 ggggtgggtacatgtatcctcattacccgtcccgtacccgtattttgaaatcggaaaaacc 40796146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 40890299 - 40890366
Alignment:
Q  127 tttctatttatacagaaggataataaattgattcactacattcgggacgagtttgagtatgggttcgg 194  Q
    |||||||||||| ||||||||||||||||||||  ||||||| | || ||| ||| ||||||||||||    
T  40890299 tttctatttatatagaaggataataaattgattttctacatttgagatgagcttgggtatgggttcgg 40890366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 261
Target Start/End: Complemental strand, 48390912 - 48390817
Alignment:
Q  167 ttcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||||||| || || |||||||||| || ||||||| | | | | | ||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  48390912 ttcgggacgggtatgggtatgggttcaggatgggtacctatattcccgttacccgtcccatacccgtgttttgaaatcggggaaaacccataccca 48390817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 4557389 - 4557305
Alignment:
Q  178 tttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||| ||||||||||||||||||||| | | | ||| ||||||||||| ||||| |||||||| | | ||||||||||| |||||    
T  4557389 tttgggtatgggttcggggtgggtacctatatactcgttacccgtcccatacccatgttttgaaaacggggaaaacccaaaccca 4557305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 268
Target Start/End: Complemental strand, 30616373 - 30616274
Alignment:
Q  170 gggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccatacccaaactcaa 268  Q
    |||||| || || ||||||||||||||||| ||  | |  |||| ||||||||||| || ||||||||||| ||| ||||||||||| ||||| ||||||    
T  30616373 gggacgggtatgggtatgggttcggggtggttatatataacctcgttacccgtcccatatccgtgttttgaaatcggggaaaacccaaacccatactcaa 30616274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 34025943 - 34026042
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| || || ||||| |||||||||||  || | | | ||| ||||||||||| |||| ||||||||| ||| |||||||||||||||||    
T  34025943 tacatttgggacgggtatgggtatgagttcggggtggaaacctatatactcgttacccgtcccatacctgtgttttgaaatcggggaaaacccataccca 34026042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 261
Target Start/End: Original strand, 49025721 - 49025768
Alignment:
Q  215 ttacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  49025721 ttacccgtcccatacccgtgttttgagatcggggaaaacccaaaccca 49025768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 10823731 - 10823693
Alignment:
Q  227 tacccgtgttttgagatcgg-gaaaacccatacccaaac 264  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  10823731 tacccgtgttttgagatcggagaaaacccatacccaaac 10823693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 23154146 - 23154065
Alignment:
Q  180 tgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||||||||||||| |||||||| | | | ||| |||||||| || |||||||| ||||| ||| |||||||||||||||||    
T  23154146 tgagtatgggttcggagtgggtacctatatactcgttacccgttccatacccgtg-tttgaaatcggggaaaacccataccca 23154065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 8916036 - 8915938
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaacccataccca 261  Q
    |||||| |||||| ||||||||||||||||||||||||||| | | | |   ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  8916036 tacatttgggacgggtttgagtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcgagaaaacccataccca 8915938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 9632376 - 9632482
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||| ||| | | | | ||||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  9632376 tacatttgggacgggtttgggtatgggttcggggtggatacctatatacccattacccgtcccatacccgtgtttcgagatcggggaaaacccataccca 9632475  T
Q  262 aactcaa 268  Q
     ||||||    
T  9632476 tactcaa 9632482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 98 - 251
Target Start/End: Original strand, 25210301 - 25210455
Alignment:
Q  98 tgtgtaagtgaaatgatttaagatttggatttctatttatacagaa-ggataataaattgattcactacattcgggacgagtttgagtatgggttcgggg 196  Q
    ||||| |||||||||||||| | ||||  |||||||||||| | || || ||| |||||||||  |||||||||||| | ||||  ||||||||| ||||    
T  25210301 tgtgtgagtgaaatgatttagggtttgagtttctatttatataaaatgggtaacaaattgattttctacattcgggaggggttttggtatgggtttgggg 25210400  T
Q  197 tgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    ||||||| | | ||||| ||||||||||| |||||||||||| |  |||||||||    
T  25210401 tgggtacatatatcctcgttacccgtcccatacccgtgttttaaagtcgggaaaa 25210455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 162 - 274
Target Start/End: Complemental strand, 35248485 - 35248366
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcg-ggaaaaccca----- 255  Q
    |||||||| ||||| ||||| ||||||||||||||||||||| ||| ||| | ||||||||||| |||||||||||||  |||| ||||||||||         
T  35248485 ctacattcaggacgggtttgggtatgggttcggggtgggtacctttatcccctttacccgtcccatacccgtgttttgtaatcgtggaaaacccaaaccc 35248386  T
Q  256 -tacccaaactcaatcaaag 274  Q
     |||||||||||||||||||    
T  35248385 gtacccaaactcaatcaaag 35248366  T

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Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 13830726 - 13830824
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcg-ggaaaacccataccca 261  Q
    |||||| |||||  ||||||||||||||||||||||||||||| | | | | ||| ||||||| ||||||||||||||||||| ||||||||||||||||    
T  13830726 tacatttgggacaggtttgagtatgggttcggggtgggtacttatatacccgtta-ccgtcccatacccgtgttttgagatcgaggaaaacccataccca 13830824  T

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Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 37999473 - 37999572
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||| ||||||||||||||||| | | | | ||||||||| | |||||||||||||||||| |||||||||||||||||    
T  37999473 tacatttgggacgggtttgggtatgagttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttgagatcggggaaaacccataccca 37999572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 261
Target Start/End: Original strand, 30846943 - 30847035
Alignment:
Q  170 gggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| ||||| ||||||||||||||||||||| | | | | | ||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  30846943 gggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccataccca 30847035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 24414231 - 24414132
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | |   ||||||||||| |||||||||||||||||| ||||||||| |||||||    
T  24414231 tacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaaccgataccca 24414132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 13531870 - 13531974
Alignment:
Q  95 gattgtgtaagtgaaatgatttaagatttggatttctatttatacagaa-ggataataaattgattcactacattcgggacgagtttgagtatgggttcg 193  Q
    |||||||| |||||||||||||| | ||||  |||||||||||| | || ||||||||||||||||  ||||||  ||| || |||||||| ||||||||    
T  13531870 gattgtgtgagtgaaatgatttagggtttgagtttctatttatataaaatggataataaattgattttctacatgtggggcgggtttgagtgtgggttcg 13531969  T
Q  194 gggtg 198  Q
    |||||    
T  13531970 gggtg 13531974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 10208529 - 10208430
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgaga-tcgggaaaacccataccca 261  Q
    |||||| |||||  ||||||||||||||||||||| ||||| | | |   ||||||||||||| |||||||||||| ||| | |||||||||||||||||    
T  10208529 tacatttgggactggtttgagtatgggttcggggtaggtacctatatatccattacccgtcccatacccgtgttttaagattggggaaaacccataccca 10208430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 35965310 - 35965408
Alignment:
Q  148 aataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg 247  Q
    ||||||||||||  |||||||||||||| ||||| |||||||||||| |||||||| | | ||| |||||| | | || |||||||||||||| ||||||    
T  35965310 aataaattgattttctacattcgggacgggtttgggtatgggttcggagtgggtacatgtatccccattacacat-ccatacccgtgttttgaaatcggg 35965408  T

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Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 345
Target Start/End: Complemental strand, 42798087 - 42797910
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaacccatacccaa 262  Q
    |||||| |||||  ||||| ||||||||||||||||||||||| | | | | ||||||||| | |||||||||||||     ||||||| |||||| |||    
T  42798087 tacatttgggacaggtttgtgtatgggttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttg-----gggaaaatccatactcaa 42797993  T
Q  263 actcaatcaaagcggaaaaaatcgtcaatttagacttggttcaggcaagtatccacatgtatgtgttttgctgcgatgtctag 345  Q
    || || ||||| | ||||||  |||||| ||||| ||||||| |||  ||| ||||  ||||| |||||| ||| ||| ||||    
T  42797992 acccagtcaaaacagaaaaacccgtcaaattagatttggttcgggcgggtaaccacgggtatgggttttgttgccatgcctag 42797910  T

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Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 45256813 - 45256897
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg 247  Q
    |||||| |||||| ||||  ||||||||||||||||||||||| | | | ||||| ||||| | |||||||||||||| ||||||    
T  45256813 tacatttgggacgggtttaggtatgggttcggggtgggtacttatatacccattaaccgtctcatacccgtgttttgaaatcggg 45256897  T

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Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 36128205 - 36128106
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaacc-cataccca 261  Q
    |||||| |||||| ||||| |||||||||||||||| |||| | | | | | |||||| |||| ||||||||||| ||||||||| ||||| ||||||||    
T  36128205 tacatttgggacgggtttgggtatgggttcggggtgagtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaccacataccca 36128106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 37106702 - 37106781
Alignment:
Q  183 gtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||||||||| |||||||| | | | | | ||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  37106702 gtatgggttcggagtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccataccca 37106781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 251
Target Start/End: Original strand, 3547155 - 3547244
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    |||||||||||  | |||||  |||||||||||||||||||| | | ||  | ||||||||||||||||||| |||||| ||||| ||||    
T  3547155 ctacattcgggtagggtttggatatgggttcggggtgggtacatatatctccgttacccgtcccgtacccgtattttgaaatcggtaaaa 3547244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 38342619 - 38342534
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg 247  Q
    |||||||||||  | ||||| ||||||||||||||||||||| | | ||| | |||||||||||||| |||| |||| | ||||||    
T  38342619 ctacattcgggtagggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggg 38342534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 264
Target Start/End: Original strand, 14331516 - 14331619
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagat-cgggaaaacccataccc 260  Q
    |||||||||||  | ||||| |||||||||||| |||||||| | | ||| | ||||||||||| |||| || |||| | ||  ||||||||||||||||    
T  14331516 ctacattcgggtagggtttgggtatgggttcggagtgggtacatatatccccgttacccgtcccatacctgtatttttaaataggggaaaacccataccc 14331615  T
Q  261 aaac 264  Q
    ||||    
T  14331616 aaac 14331619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 44057871 - 44057950
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcgggg-tgggtacttttgtcctcattacccgtcccgtacccgtgttttga 240  Q
    |||||||||||  | ||||| |||||||||||||| ||||||| | | ||| |||||||||||||||||| || ||||||    
T  44057871 ctacattcgggtagggtttgggtatgggttcgggggtgggtacatatatccccattacccgtcccgtaccggtattttga 44057950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 261
Target Start/End: Complemental strand, 13705459 - 13705361
Alignment:
Q  164 acattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||| |||||| ||||  ||||||||||||||||||||| | | | | | ||||| ||| | |||||||||||||| ||| |||||||| ||||||||    
T  13705459 acatttgggacgggtttaggtatgggttcggggtgggtacctatatacccgttacctgtctcatacccgtgttttgaaatcggggaaaactcataccca 13705361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 30696848 - 30696954
Alignment:
Q  98 tgtgtaagtgaaatgatttaagatttggatttctatttatacagaa-ggataataaattgattcactacattcgggacgagtttgagtatgggttcgggg 196  Q
    ||||| ||||| |||||||| | |||| ||||||||||||| | || || |||||||||||||   |||||| ||||   ||||| ||||| ||||||||    
T  30696848 tgtgtgagtgacatgatttagggtttgaatttctatttatataaaatgggtaataaattgattttttacatttgggataggtttgggtatgagttcgggg 30696947  T
Q  197 tgggtac 203  Q
    |||||||    
T  30696948 tgggtac 30696954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 42102704 - 42102666
Alignment:
Q  235 ttttgagatcgggaaaacccatacccaaactcaatcaaa 273  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  42102704 ttttgaaatcgggaaaacccatacccaaacccaatcaaa 42102666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 205
Target Start/End: Complemental strand, 17845556 - 17845448
Alignment:
Q  99 gtgtaagtgaaatgatttaagatttgga-tttctatttatacagaa-ggataataaattgattcact-acattcgggacgagtttgagtatgggttcggg 195  Q
    |||| |||||||||||||| | |||||| |||||||||||| | || ||||||||||||||||   | ||||||| |||| ||||| |||||||||  ||    
T  17845556 gtgtgagtgaaatgatttagg-tttggagtttctatttatataaaaaggataataaattgatttttttacattcgagacgggtttgggtatgggttaagg 17845458  T
Q  196 gtgggtactt 205  Q
    ||||||||||    
T  17845457 gtgggtactt 17845448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 43371542 - 43371627
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg 247  Q
    |||||||||||  | ||||| ||||| ||| ||||||||||| | | ||| | ||||||||||||||||||| |||| | ||||||    
T  43371542 ctacattcgggtagggtttgggtatgagtttggggtgggtacatatatccccgttacccgtcccgtacccgtattttaaaatcggg 43371627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 4961566 - 4961510
Alignment:
Q  147 taataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtac 203  Q
    ||||||||| |||  ||| |||||||||||||||| ||||||||||| |||| ||||    
T  4961566 taataaattcattttctatattcgggacgagtttgggtatgggttcgaggtgtgtac 4961510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 6e-22; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 165 - 261
Target Start/End: Original strand, 2367317 - 2367414
Alignment:
Q  165 cattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||| |||||| ||||| ||||||||||||||||||||||| | | | | ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  2367317 catttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccataccca 2367414  T

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Target: chr6; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 32853833 - 32853932
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | | | ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  32853833 tacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccataccca 32853932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 163 - 268
Target Start/End: Original strand, 32532529 - 32532635
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| || |||||||||||||||||||||||| | | | | ||||||||||||| |||||||||||||| ||| |||||||||||||| ||    
T  32532529 tacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcggggaaaacccatactca 32532628  T
Q  262 aactcaa 268  Q
     ||||||    
T  32532629 tactcaa 32532635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 3484022 - 3483926
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccatac 258  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | | | |||||| |||| ||||||||||| |||||| ||||||||||||||    
T  3484022 tacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaacccatac 3483926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 28079780 - 28079696
Alignment:
Q  178 tttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||| ||||||||||||||||||||| | | ||| | ||||||||||||||||| |||||||| ||| ||||||||||| |||||    
T  28079780 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaaccca 28079696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 5863482 - 5863383
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||| ||||||||  | | | | | ||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  5863482 tacatttgggacgggtttgggtatgggttcgaggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccataccca 5863383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 24225687 - 24225786
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| | ||||||||||||||||||| | | | | | ||||||||||| || ||||||||||||||| ||||||| |||||||||    
T  24225687 tacatttgggacgggtttgggcatgggttcggggtgggtacctatatacccgttacccgtcccatatccgtgttttgagatcggggaaaatccataccca 24225786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 27534673 - 27534772
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| |||||| |||||||||||||| | | | | | ||||||||||| ||||||||||| |||||| |||||||| ||||||||    
T  27534673 tacatttgggacgggtttgggtatggattcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcataccca 27534772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 27738761 - 27738860
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | |     ||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  27738761 tacatttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaacccataccca 27738860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 260
Target Start/End: Original strand, 12141374 - 12141472
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgaga-tcgggaaaacccataccc 260  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | | | | ||||||||| || ||||||||||||| | ||||||||||||||||    
T  12141374 tacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgtcacccgtcccatatccgtgttttgagattggggaaaacccataccc 12141472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 10142617 - 10142518
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||  ||||| ||||| ||||||||||||||| | | | | | ||||| ||||| ||||||| |||||||||| |||||||||||||||||    
T  10142617 tacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacctgtcccatacccgttttttgagatcggggaaaacccataccca 10142518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 261
Target Start/End: Original strand, 30986294 - 30986341
Alignment:
Q  215 ttacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  30986294 ttacccgtcccatacccgtgttttgagatcggggaaaacccataccca 30986341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 273
Target Start/End: Original strand, 32053085 - 32053188
Alignment:
Q  171 ggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccatacccaaactcaat 269  Q
    ||||| ||||| ||||||||| ||||||||||| | | | | | ||||||||||| || || |||||||| ||| |||||||||||||||||||| || |    
T  32053085 ggacgggtttgggtatgggtttggggtgggtacatatatacccgttacccgtcccatatccatgttttgaaatcggggaaaacccatacccaaacccagt 32053184  T
Q  270 caaa 273  Q
    ||||    
T  32053185 caaa 32053188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 10188126 - 10188080
Alignment:
Q  216 tacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||    
T  10188126 tacccgtcccatacccgtgttttgagatcggggaaaacccataccca 10188080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 240
Target Start/End: Complemental strand, 10925611 - 10925465
Alignment:
Q  95 gattgtgtaagtgaaatgatttaagatttggatttctatttatacagaagga-taataaattgattcactacattcgggacgagtttgagtatgggttcg 193  Q
    |||||||| |||||||||||||| | |||    ||||||||||| | ||||| |||||||||  ||   ||||||||| | ||||||  |||||||||||    
T  10925611 gattgtgttagtgaaatgatttagggtttcagattctatttatataaaaggaataataaattatttttttacattcggaatgagtttaggtatgggttcg 10925512  T
Q  194 gggtgggtacttttgtcctcattacccgtcccgtacccgtgttttga 240  Q
    |||||| ||||| | ||  |||||||| || ||||||| ||||||||    
T  10925511 gggtggatacttatatctccattacccatctcgtacccatgttttga 10925465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 252
Target Start/End: Complemental strand, 14410946 - 14410864
Alignment:
Q  171 ggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaac 252  Q
    ||||| ||||| ||||||||||||||||||||| | | | | | ||||||||||| |||||||||||||| ||| ||||||||    
T  14410946 ggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatctgggaaaac 14410864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 256604 - 256507
Alignment:
Q  150 taaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg 247  Q
    ||||||||||  |||||||  ||| | ||||| ||||||||| ||||||||||| | | | | ||||||||||| ||||||| |||||||| ||||||    
T  256604 taaattgattttctacatttaggaggggtttgggtatgggtttggggtgggtacctatatgcccattacccgtctcgtacccatgttttgaaatcggg 256507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 157
Target Start/End: Complemental strand, 372948 - 372887
Alignment:
Q  96 attgtgtaagtgaaatgatttaagatttggatttctatttatacagaaggataataaattga 157  Q
    |||||||  ||||||||||||| ||||| |||||||||||||| | ||||||||||| ||||    
T  372948 attgtgtgtgtgaaatgatttaggatttagatttctatttatataaaaggataataagttga 372887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 9442441 - 9442518
Alignment:
Q  185 atgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa-cccataccca 261  Q
    |||||||||| |||||||| | | | | | ||||||||||| |||||||||||||| |||||||||| ||||||||||    
T  9442441 atgggttcggagtgggtacctctatacccgttacccgtcccatacccgtgttttgaaatcgggaaaatcccataccca 9442518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 29199985 - 29199900
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg 247  Q
    |||||||||||  ||||||| ||||||||||||||| | ||| | | |||   ||||||||||||||||||| |||||| ||||||    
T  29199985 ctacattcgggtagagtttgggtatgggttcggggtagatacatatatccctgttacccgtcccgtacccgtattttgaaatcggg 29199900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 32959869 - 32959949
Alignment:
Q  183 gtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgaga-tcgggaaaacccatacccaa 262  Q
    ||||||||||||||||| ||| | | ||| | |||||||| ||||||||||||||||| | | ||||||||||| ||||||    
T  32959869 gtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaaacccaa 32959949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 34178398 - 34178326
Alignment:
Q  193 ggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccatacccaaac 264  Q
    ||||||||||| | | ||||  ||||||||| |||||||||||||||| ||| ||| ||||||||||||||||    
T  34178398 ggggtgggtacctatatccttgttacccgtctcgtacccgtgttttgaaatcaggggaaacccatacccaaac 34178326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 1947933 - 1947862
Alignment:
Q  121 tttggatttctatttatacagaagga-taataaattgattcactacattcgggacgagtttgagtatgggtt 191  Q
    ||||||||| |||||||| | ||||  |||||||||||||  ||||||| || |||||||||||||||||||    
T  1947933 tttggatttttatttatataaaaggggtaataaattgattttctacatttggaacgagtttgagtatgggtt 1947862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 240
Target Start/End: Original strand, 13769003 - 13769138
Alignment:
Q  106 tgaaatgatttaagatttggatttctatttatacagaagga-taataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtact 204  Q
    |||||| ||||| | ||||  |||| ||||||| | ||||| |||||||||||||  |||||||| ||||| |||||  ||||||||| ||||||||||     
T  13769003 tgaaataatttatggtttgagtttcaatttatataaaaggagtaataaattgattttctacattcaggacgggtttggatatgggttctgggtgggtacc 13769102  T
Q  205 tttgtcctcattacccgtcccgtacccgtgttttga 240  Q
    | | |   | ||||||||||| ||||| ||||||||    
T  13769103 tatatgtccgttacccgtcccatacccatgttttga 13769138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 257
Target Start/End: Original strand, 15498313 - 15498408
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccata 257  Q
    |||||| |||||| ||||| || |||||||||| ||||||| | | | | ||||||| ||| | |||||||||||||| ||| |||||||||||||    
T  15498313 tacatttgggacgggtttgggtgtgggttcgggatgggtacctatatacccattacctgtctcatacccgtgttttgaaatcggggaaaacccata 15498408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 7393984 - 7393902
Alignment:
Q  165 cattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg 247  Q
    ||||| ||| ||||||||||||||||||||||||| ||| | | | | ||||| ||||| | ||| |||||||||| ||||||    
T  7393984 cattcaggatgagtttgagtatgggttcggggtggatacctatatacccattatccgtctcttactcgtgttttgaaatcggg 7393902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 12678190 - 12678109
Alignment:
Q  166 attcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg 247  Q
    |||||||||| ||||| |||||||||| |||||||||| | | | | | ||||||||||| |||| |||| |||| ||||||    
T  12678190 attcgggacgggtttgggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtcttgaaatcggg 12678109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 20349068 - 20349137
Alignment:
Q  178 tttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg 247  Q
    |||| ||||| ||||||||||||||| | | ||| | |||| |||||| |||||||||||||| ||||||    
T  20349068 tttgggtatgagttcggggtgggtacctatatccccgttactcgtcccatacccgtgttttgaaatcggg 20349137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 237
Target Start/End: Original strand, 30816251 - 30816323
Alignment:
Q  165 cattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttt 237  Q
    ||||||||||| |||||  |||||||||||||||||| | | | | | |||||||| |||| |||||||||||    
T  30816251 cattcgggacgggtttggatatgggttcggggtgggttcctatatacccattacccatcccatacccgtgttt 30816323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 150 - 251
Target Start/End: Complemental strand, 48125795 - 48125694
Alignment:
Q  150 taaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaa 249  Q
    ||||||||||  ||||||||| |||||||||| ||||||||||||||||| ||| | | ||||| |||||||||||||||||||||||| | ||| ||||    
T  48125795 taaattgattttctacattcgcgacgagtttgggtatgggttcggggtggatacctatatcctcgttacccgtcccgtacccgtgttttaaaatcaggaa 48125696  T
Q  250 aa 251  Q
    ||    
T  48125695 aa 48125694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 267
Target Start/End: Original strand, 29936406 - 29936511
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | | | ||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  29936406 tacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgagatcggggaaaacccataccca 29936505  T
Q  262 aactca 267  Q
     |||||    
T  29936506 tactca 29936511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 24236860 - 24236761
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||||||||||||||||||||||||| | | | | | || ||||| || |||||||||||||||||| |||||||||||||||||    
T  24236860 tacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttccccgttccatacccgtgttttgagatcggggaaaacccataccca 24236761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 36187319 - 36187220
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| |||||||||| |||||||||| | | | | | ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  36187319 tacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccataccca 36187220  T

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Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 51421848 - 51421947
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg-aaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | |   ||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  51421848 tacatttgggacgggtttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgttttgagatcgggaaaaacccataccca 51421947  T

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Target: chr1; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 95 - 244
Target Start/End: Complemental strand, 5283761 - 5283611
Alignment:
Q  95 gattgtgtaagtgaaatgatttaagatttggatttctatttatacagaagg-ataataaattgattcactacattcgggacgagtttgagtatgggttcg 193  Q
    |||||||| || ||||||||||||  ||||  || ||||||||||| |||| || |||||||||||  ||||| ||  |||| ||||  ||||| |||||    
T  5283761 gattgtgtgagagaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgattttctacaatccagacgggtttaggtatgagttcg 5283662  T
Q  194 gggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc 244  Q
     ||||||||||| | ||| ||||||||||||||||| | ||||||||||||    
T  5283661 aggtgggtacttctatccccattacccgtcccgtactcatgttttgagatc 5283611  T

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Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 104 - 255
Target Start/End: Complemental strand, 47645018 - 47644866
Alignment:
Q  104 agtgaaatgatttaagatttggatttctatttatacagaagg-ataataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggta 202  Q
    |||||||||||||| ||| ||  |||||||||||| | |||| ||||||||||  |    |||||||||||||||| ||  |||| ||||||||| ||||    
T  47645018 agtgaaatgatttaggatctgagtttctatttatataaaagggataataaattattattttacattcgggacgagtatggatatgagttcggggtaggta 47644919  T
Q  203 cttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaaccca 255  Q
    ||| | ||| ||||| |||||||||||| ||||||||||||| |||||||||||    
T  47644918 cttctatcc-cattatccgtcccgtacctgtgttttgagatcggggaaaaccca 47644866  T

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Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 19572611 - 19572512
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg-aaaacccataccca 261  Q
    |||||| |||||| || |||||||||||||||||||||||| | | | | | ||||| ||||| |||||||||||||| |||||| ||||||||||||||    
T  19572611 tacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcgggaaaaacccataccca 19572512  T

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Target: chr1; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 23490870 - 23490771
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||  ||||||||||||||||||||| | | | | | ||||||||||| ||||||||||| |||||| |||||||||||||||||    
T  23490870 tacatttgggacgggttttggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccataccca 23490771  T

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Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 28297924 - 28298023
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | | | ||||||||||| ||||||||||| |||||| |||||||| ||||||||    
T  28297924 tacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcataccca 28298023  T

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Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 49250872 - 49250773
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||| ||||| ||| | | | | ||||||||||||| |||||||||||||||||| |||||||| ||||||||    
T  49250872 tacatttgggacgggtttgggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttttgagatcggggaaaactcataccca 49250773  T

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Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 243
Target Start/End: Complemental strand, 48576282 - 48576137
Alignment:
Q  99 gtgtaagtgaaatgatttaagatttg-gatttctatttatacagaa-ggataataaattgattcactacattcgggacgagtttgagtatgggttcgggg 196  Q
    ||||||||||||||||||| | |||| ||||| |||||||||| || |||| |||||||||||  || |||||||||| |||||  |  ||||||| | |    
T  48576282 gtgtaagtgaaatgatttagggtttgagattt-tatttatacaaaaaggattataaattgattttcttcattcgggacaagtttaggcgtgggttcagag 48576184  T
Q  197 tgggtacttttgtcctcattacccgtcccgtacccgtgttttgagat 243  Q
    |||| |||||| ||| ||||||||||| | |||| ||||||||||||    
T  48576183 tgggcacttttatccccattacccgtctcatacctgtgttttgagat 48576137  T

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Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 260
Target Start/End: Original strand, 39219182 - 39219346
Alignment:
Q  98 tgtgtaagtgaaatgatttaagatttggatttctatttatacagaag-gataataaattgattcactacattcgggacgagtttgagtatgggttcgggg 196  Q
    ||||| || ||||||||||| | ||||  |||||||||||| | ||| | ||||||||| |||  |||||||  | ||||||||| ||||||||||||||    
T  39219182 tgtgtgagcgaaatgatttagggtttgagtttctatttatataaaagaggtaataaattaattttctacatttagaacgagtttgggtatgggttcgggg 39219281  T
Q  197 tgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccc 260  Q
    ||||||| | | ||| | ||||  || ||||||||||||||| | ||| ||||||||||| ||||    
T  39219282 tgggtacatgtatccccgttacttgttccgtacccgtgttttaaaatcggggaaaacccaaaccc 39219346  T

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Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 18354179 - 18354080
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| ||||||||| || |||| ||||||||||||| |||| | | | | ||||||||||| ||||| |||||||| ||| |||||||||||||||||    
T  18354179 tacatttgggacgagtatgggtatcggttcggggtgggaacttatatacccgttacccgtcccatacccatgttttgaaatcggggaaaacccataccca 18354080  T

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Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 34611063 - 34611162
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg-aaaacccataccca 261  Q
    |||||| |||||| ||||| |||||||||||||||| |||| | | | | | ||||  ||||| ||||||||||||||||||||| ||||||||||||||    
T  34611063 tacatttgggacgggtttgggtatgggttcggggtgagtacctatatacacgttacatgtcccatacccgtgttttgagatcgggaaaaacccataccca 34611162  T

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Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 16903513 - 16903601
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    ||||||||||||| ||||| ||||| ||||||||||||||| | | ||| |||||||  |||||||| |||||||| | || |||||||    
T  16903513 tacattcgggacgggtttgggtatgagttcggggtgggtacctatatccccattacctatcccgtactcgtgttttaaaattgggaaaa 16903601  T

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Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 238
Target Start/End: Complemental strand, 41477151 - 41476976
Alignment:
Q  64 aagtgggtgtcttgtgaaagaccgagacatcgattgtgtaagtgaaatgatttaagatttggatttctatttatacagaa-ggataataaattgattcac 162  Q
    ||||||||||| | |||||||| ||||| | || ||||| | |||||| ||||| | |||  |||||| |||||| | || || ||| |||||||||  |    
T  41477151 aagtgggtgtcatctgaaagacggagactttgactgtgtgaatgaaataatttagggtttccatttctctttatataaaaagggtaacaaattgattttc 41477052  T
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgtttt 238  Q
    | | ||||||||| ||||| |||||| |||||||||||||| | | ||| | ||| ||||||||||| ||| ||||    
T  41477051 tgctttcgggacgggtttgggtatggattcggggtgggtacatatatccacgttatccgtcccgtactcgtatttt 41476976  T

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Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 16237404 - 16237310
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaaccca 255  Q
    |||||||||||  | ||||| |||||||||||||||  |||| | | ||||| ||||||||||| ||||||| |||||| ||| |||||||||||    
T  16237404 ctacattcgggtagggtttgggtatgggttcggggttagtacatatatcctcgttacccgtcccttacccgtattttgaaatcggggaaaaccca 16237310  T

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Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 284
Target Start/End: Complemental strand, 42439769 - 42439641
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaa-------accca 255  Q
    |||||| |||| |||||||  |||||||||||||||||||| | | | | | |||| |||||| ||||| |||||||||||||| |||       |||||    
T  42439769 tacatttgggatgagtttggatatgggttcggggtgggtacctatatacccgttactcgtcccatacccatgttttgagatcggaaaaaattcataccca 42439670  T
Q  256 tacccaaactcaatcaaagcggaaaaaat 284  Q
    |||||||||||| |||||  |||||||||    
T  42439669 tacccaaactcagtcaaaatggaaaaaat 42439641  T

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Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 283
Target Start/End: Complemental strand, 10778666 - 10778539
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggga-------aaaccca 255  Q
    |||||| | |||| || |||||||||||||||||||| ||  | |  || | ||||||||||| |||||||||||||| |||||||       |||| ||    
T  10778666 tacatttgagacgggtatgagtatgggttcggggtggatatctataaccccgttacccgtcccatacccgtgttttgaaatcgggaaaaacttaaactca 10778567  T
Q  256 tacccaaactcaatcaaagcggaaaaaa 283  Q
    ||||||||| || |||||||||||||||    
T  10778566 tacccaaacccagtcaaagcggaaaaaa 10778539  T

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Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 251
Target Start/End: Original strand, 12494999 - 12495088
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    ||||||| |||||| ||||| ||||||||||| ||||||||| | | | | | |||| |||||| || ||||||||||| ||||||||||    
T  12494999 ctacatttgggacgggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatccgtgttttgaaatcgggaaaa 12495088  T

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Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 261
Target Start/End: Original strand, 17134944 - 17135036
Alignment:
Q  170 gggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||||||| || ||||||||||||||  ||||| | | | | | ||||||||| | |||||||||||||| ||| |||||||||||||||||    
T  17134944 gggacgagtatgggtatgggttcggggatggtacctatatacccgttacccgtctcatacccgtgttttgaaatcggggaaaacccataccca 17135036  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 258
Target Start/End: Original strand, 24710889 - 24710933
Alignment:
Q  215 ttacccgtcccgtacccgtgttttgagatc-gggaaaacccatac 258  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||    
T  24710889 ttacccgtcccatacccgtgttttgagatcggggaaaacccatac 24710933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 33293580 - 33293502
Alignment:
Q  213 cattacccgtcccgtacccgtgttttgagatcggga-------aaacccatacccaaactcaatcaaagcggaaaaaat 284  Q
    ||||||||||||| |||||||||||||| |||||||       |||| ||||||||||| |||||||| ||||||||||    
T  33293580 cattacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccaatcaaaacggaaaaaat 33293502  T

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Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 34085233 - 34085313
Alignment:
Q  171 ggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    |||||||| || ||||||||||||||||||||| | |  || | |||||| |||| ||| |||||||||| ||||||||||    
T  34085233 ggacgagtatgggtatgggttcggggtgggtacatataaccccgttacccatcccatactcgtgttttgaaatcgggaaaa 34085313  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 9982987 - 9982912
Alignment:
Q  165 cattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttga 240  Q
    ||||||||| | ||||| ||||||||||||||||||||| | | | ||| |||||| |||| | ||||||||||||    
T  9982987 cattcgggatgggtttgggtatgggttcggggtgggtacctatatactcgttacccatcccattcccgtgttttga 9982912  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 45866264 - 45866185
Alignment:
Q  183 gtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||| ||| ||||||||||| | | | ||||||||| ||| | |||||||||||||| ||| |||||||||||||||||    
T  45866264 gtatgagtttggggtgggtacctatatactcattacctgtctcatacccgtgttttgaaatcggggaaaacccataccca 45866185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 195
Target Start/End: Original strand, 23719527 - 23719624
Alignment:
Q  98 tgtgtaagtgaaatgatttaagatttggatttctatttatacagaa-ggataataaattgattcactacattcgggacgagtttgagtatgggttcggg 195  Q
    ||||| ||||||||||||||   ||||  |||||||||||| | || || || ||||||||||   ||||||||||||||||||||||||| |||||||    
T  23719527 tgtgttagtgaaatgatttatagtttgagtttctatttatataaaaagggtagtaaattgatttg-tacattcgggacgagtttgagtatgagttcggg 23719624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 49741104 - 49741066
Alignment:
Q  165 cattcgggacgagtttgagtatgggttcggggtgggtac 203  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  49741104 cattcgggacgggtttgggtatgggttcggggtgggtac 49741066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 50426740 - 50426658
Alignment:
Q  183 gtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccatacccaaac 264  Q
    ||||||||||||||||||||| | | | | | ||| ||||| | |||||||||||||| ||| |||||| |||||||||||||    
T  50426740 gtatgggttcggggtgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcagggaaagcccatacccaaac 50426658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 23968619 - 23968668
Alignment:
Q  213 cattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||||||||||| |||||||||||||| | | |||||||||||||||||    
T  23968619 cattacccgtcccatacccgtgttttgaaaccggggaaaacccataccca 23968668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 25181133 - 25181230
Alignment:
Q  104 agtgaaatgatttaaga-tttggatttctatttatacagaagg-ataataaattgattcactacattcgggacgagtttgagtatgggttcggggtgg 199  Q
    |||||||| |||||||| ||| | |||||||||||| |||||| ||| |||||||| |   |||| | |||||||||||||||||| |||| ||||||    
T  25181133 agtgaaattatttaagagtttaggtttctatttatatagaagggatagtaaattgactttttacaattgggacgagtttgagtatgagttcagggtgg 25181230  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 35069989 - 35069948
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtac 203  Q
    |||||||||||  | |||||||||||||||||||||||||||    
T  35069989 ctacattcgggtagggtttgagtatgggttcggggtgggtac 35069948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 268
Target Start/End: Original strand, 23058470 - 23058562
Alignment:
Q  177 gtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgg-gaaaacccatacccaaactcaa 268  Q
    ||||| ||||||||||||||||||||| | | ||| | ||||||||| ||||| ||  |||||| ||||| |||||| || ||||| ||||||    
T  23058470 gtttgggtatgggttcggggtgggtacctatatccccgttacccgtctcgtactcgcattttgaaatcggagaaaactcaaacccatactcaa 23058562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 23966863 - 23966903
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtac 203  Q
    |||||| |||||| || ||||||||||||||||||||||||    
T  23966863 tacatttgggacgggtatgagtatgggttcggggtgggtac 23966903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 273
Target Start/End: Complemental strand, 27850426 - 27850314
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg-aaaacccataccc 260  Q
    |||||||||||||| ||||| ||||||||||||| ||||||| | |   | | ||||||||||| |||||||||||||| |||||| |||||||||||||    
T  27850426 ctacattcgggacgggtttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccataccc 27850327  T
Q  261 aaactcaatcaaa 273  Q
    |||| ||||||||    
T  27850326 aaacccaatcaaa 27850314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 7780002 - 7780101
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| |||| |||||||||||||||| | | | | ||||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  7780002 tacatttgggacgggtttgggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgagatcggggaaaacccataccca 7780101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 16866163 - 16866262
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||||||||||| | | | | | |||| |||||| |||||||||||||||||| |||||||||||||||||    
T  16866163 tacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgagatcggggaaaacccataccca 16866262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 12980373 - 12980455
Alignment:
Q  165 cattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg 247  Q
    |||| |||||| ||||| ||||||||||||||||||||||| | | | ||||||||||||| |||||||||||||| ||||||    
T  12980373 catttgggacgggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaatcggg 12980455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 26622955 - 26623044
Alignment:
Q  173 acgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||||||| ||||||||||||||||||||||| | | | |||||||| |||| |||||||||||||| ||| ||||||||||| |||||    
T  26622955 acgagtttgggtatgggttcggggtgggtacttatatacccattacccatcccatacccgtgttttgaaatcagggaaaacccaaaccca 26623044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 35074464 - 35074563
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||||| ||||| ||||||||||||| ||||||| | | | | | ||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  35074464 tacatttgggacgggtttgggtatgggttcgggttgggtacctatatacccgttacccgtcccatacccgtgttttaagatcggggaaaacccataccca 35074563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 38139891 - 38139792
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgaga-tcgggaaaacccataccca 261  Q
    |||||| | |||| |||||  |||||||||||||||||||||| | | ||||||||||||||| ||| |||||||||| | | |||||||||||||||||    
T  38139891 tacatttgagacgggtttggttatgggttcggggtgggtacttatatactcattacccgtcccatactcgtgttttgaaattggggaaaacccataccca 38139792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 285
Target Start/End: Original strand, 41103670 - 41103773
Alignment:
Q  183 gtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccatacccaaactcaatcaaagcggaaaa 281  Q
    ||||||||||||||||||||||| | | | | ||| ||||||| |||||||||||||| ||| ||||||||||||||||| || || ||||| ||| |||    
T  41103670 gtatgggttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcggggaaaacccatacccacacccagtcaaaacgggaaa 41103769  T
Q  282 aatc 285  Q
    ||||    
T  41103770 aatc 41103773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 45380101 - 45380200
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg-aaaacccataccca 261  Q
    |||||| |||||||||||  ||||||||||||||||||||| | | | | | ||||||||||| ||||||| |||||| |||||| ||||||||||||||    
T  45380101 tacatttgggacgagtttaggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaaatcgggaaaaacccataccca 45380200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 268
Target Start/End: Complemental strand, 3227045 - 3226939
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    |||||| |||| | || |||||||||||||||||||||||| | | | |   ||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  3227045 tacatttgggatgtgtatgagtatgggttcggggtgggtacctatattcctgttacccgtcccatacccgtgttttgaaatcggggaaaacccataccca 3226946  T
Q  262 aactcaa 268  Q
     ||||||    
T  3226945 tactcaa 3226939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 261
Target Start/End: Original strand, 24753210 - 24753256
Alignment:
Q  215 ttacccgtcccgtacccgtgttttgagatcgggaaaacccataccca 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  24753210 ttacccgtcccatacccgtgttttgagatcgggaaaacccataccca 24753256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 104 - 251
Target Start/End: Complemental strand, 23475423 - 23475274
Alignment:
Q  104 agtgaaatgatttaagatttggatttctatttatacagaa-ggataataaattga-ttcactacattcgggacgagtttgagtatgggttcggggtgggt 201  Q
    ||||||||||||||   ||||| ||| |||||||||| || || || |||||||| ||   ||||||||||||| ||||| |||||||||||  ||||||    
T  23475423 agtgaaatgatttagagtttgggtttttatttatacaaaacgggtagtaaattgatttttttacattcgggacgggtttgggtatgggttcgaagtgggt 23475324  T
Q  202 acttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    || | | ||| |||||||| ||||  ||||||||||||| ||||||||||    
T  23475323 acatatatccccattacccatcccaaacccgtgttttgaaatcgggaaaa 23475274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 162 - 251
Target Start/End: Original strand, 32546185 - 32546274
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    |||||||||||  | ||||| ||||||||||||||||||||| | | ||| | |||||||| |||||||||| |||||| ||||||||||    
T  32546185 ctacattcgggtagggtttgggtatgggttcggggtgggtacatatatccccgttacccgttccgtacccgtattttgaaatcgggaaaa 32546274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 251
Target Start/End: Complemental strand, 18125327 - 18125239
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    |||||| |||||| ||||| ||||| ||||||||||||||| | | | | | ||||||||||| ||||||||||| |||||||||||||    
T  18125327 tacatttgggacgggtttgggtatgcgttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaa 18125239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 258
Target Start/End: Original strand, 21702653 - 21702749
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccatac 258  Q
    |||||| |||||| ||| | ||||||||||||||||||||| | | | | | ||||||||||| ||||||||||| |||||| ||||||||||||||    
T  21702653 tacatttgggacgggttggggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatac 21702749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 261
Target Start/End: Complemental strand, 44845235 - 44845135
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccc 260  Q
    |||||||||||  | ||||| ||||||||||||||||||||  | | ||||||||| ||||||||||||||| || ||| ||| ||||||||||| ||||    
T  44845235 ctacattcgggcagggtttgtgtatgggttcggggtgggtaaatatatcctcattaaccgtcccgtacccgtattatgaaatcggggaaaacccaaaccc 44845136  T
Q  261 a 261  Q
    |    
T  44845135 a 44845135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 30650625 - 30650724
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgaga-tcgggaaaacccataccca 261  Q
    |||||| ||||||  |||| ||||||||||||||||||||| | | | | | ||||||||||| |||||||||||||||| | |||||||| ||||||||    
T  30650625 tacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagattggggaaaactcataccca 30650724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 45885844 - 45885765
Alignment:
Q  183 gtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||||||||||||||||||| | | | ||  ||||||||||| |||||||||||||||||| |||||||| ||||||||    
T  45885844 gtatgggttcggggtgggtacctatatacttgttacccgtcccatacccgtgttttgagatcggggaaaactcataccca 45885765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 273
Target Start/End: Original strand, 29292636 - 29292809
Alignment:
Q  104 agtgaaatgatttaagatttggatttctatttatacagaa-ggataataaattgattcactacattcgggacgagtttgagtatgggttcggggtgg--g 200  Q
    |||||||| ||||| | ||||||||||| |||||| | || || || ||||||||||  ||||||||| |||||||||  |||||||||  ||||||  |    
T  29292636 agtgaaataatttagggtttggatttctctttatataaaaggggtagtaaattgattttctacattcgagacgagtttaggtatgggtttagggtgggcg 29292735  T
Q  201 tacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccatacccaaactcaatcaaa 273  Q
    ||| | | |||   |||||| || |||||||||||||||| ||| ||||||| |||||||||||| || |||||    
T  29292736 tacctatatccatgttacccatctcgtacccgtgttttgaaatcggggaaaatccatacccaaacccagtcaaa 29292809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 261
Target Start/End: Original strand, 22973396 - 22973481
Alignment:
Q  177 gtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcg-ggaaaacccataccca 261  Q
    ||||| ||||||||||| |||||||||   | ||| ||||||||||||||||||||| |||||| |||| |||||||||| |||||    
T  22973396 gtttgggtatgggttcgaggtgggtacagatatccccattacccgtcccgtacccgtattttgaaatcgtggaaaacccaaaccca 22973481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 104 - 247
Target Start/End: Original strand, 3157017 - 3157161
Alignment:
Q  104 agtgaaatgatttaagatttggatttctatttatacagaagga-taataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggta 202  Q
    ||||||| |||||| ||||||| |||||||||||| || |||  |||||||||||||  |||  || |||||| ||||| |||| ||||||| |||||||    
T  3157017 agtgaaaggatttaggatttgggtttctatttatatagtaggggtaataaattgattttctatgtttgggacgggtttgggtataggttcggtgtgggta 3157116  T
Q  203 cttttgtcctcattacccgtcccgtacccgtgttttgagatcggg 247  Q
    | | | ||| | ||| ||||||| ||||| | |||||| ||||||    
T  3157117 cctatatccccgttatccgtcccatacccatattttgaaatcggg 3157161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 3774047 - 3774123
Alignment:
Q  147 taataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtc 223  Q
    |||||||||||||  ||| ||||||||||  ||||||||||||||| |||||||||| | | ||||| |||||||||    
T  3774047 taataaattgattttctaaattcgggacggatttgagtatgggttcagggtgggtacctatatcctcgttacccgtc 3774123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 10072480 - 10072559
Alignment:
Q  183 gtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||||||||||||||||||| | | | | | |||||||| || |||||||||||||| ||| |||||||||||||||||    
T  10072480 gtatgggttcggggtgggtacctatatacccgttacccgttccatacccgtgttttgaaatcggggaaaacccataccca 10072559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 45708944 - 45708853
Alignment:
Q  183 gtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgg-gaaaacccatacccaaactcaatcaaa 273  Q
    ||||| ||||||||||||||| | | | | | ||||||||||  |||||||||||||||||||| ||||||||||||| |||| || |||||    
T  45708944 gtatgagttcggggtgggtacctatatacccgttacccgtccaatacccgtgttttgagatcggagaaaacccataccaaaacccagtcaaa 45708853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 261
Target Start/End: Complemental strand, 18825957 - 18825872
Alignment:
Q  177 gtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||| ||| ||||||||||||||||| | | | | | ||||||||||| |||||||||||||| ||| ||||||||||| |||||    
T  18825957 gtttgggtacgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaaccca 18825872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 5377081 - 5377185
Alignment:
Q  165 cattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccatacccaaa 263  Q
    ||||||||||   |||| ||||||||||||||||||||| | | | | | ||||||||||| |||| ||||||||| ||| ||||||||||| || || |    
T  5377081 cattcgggacagatttgggtatgggttcggggtgggtacctatataccctttacccgtcccatacctgtgttttgaaatcggggaaaacccaaactcata 5377180  T
Q  264 ctcaa 268  Q
    |||||    
T  5377181 ctcaa 5377185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 255
Target Start/End: Original strand, 16079016 - 16079100
Alignment:
Q  172 gacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgg-gaaaaccca 255  Q
    |||||||||| |||| |||| |||||||| || | | | | | ||||||||||| |||||||||||||||||||| |||||||||    
T  16079016 gacgagtttgggtataggtttggggtgggcacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaaccca 16079100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 25905622 - 25905721
Alignment:
Q  163 tacattcgggacga-gtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgaga-tcgggaaaacccataccc 260  Q
    |||||| ||||||| ||||| ||||| ||||||||||| ||| | ||| | | ||||||||||| |||| ||||||||||| | ||||||||||||||||    
T  25905622 tacatttgggacgatgtttgggtatgagttcggggtgg-tacctatgtacccgttacccgtcccatacctgtgttttgagattggggaaaacccataccc 25905720  T

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Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 44734436 - 44734368
Alignment:
Q  183 gtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    ||||||||||||||||||||| | | | | ||||||| ||||| |||||||||||||| |||| |||||    
T  44734436 gtatgggttcggggtgggtacctatatacccattaccggtcccatacccgtgttttgaaatcgagaaaa 44734368  T

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Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 19440109 - 19440034
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgtttt 238  Q
    ||||||||||||| ||||| |||||||||||  |||||||| | | ||| |||||||| ||||  |||||||||||    
T  19440109 tacattcgggacgggtttgggtatgggttcgaagtgggtacatatatccccattacccatcccaaacccgtgtttt 19440034  T

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Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 23533702 - 23533604
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||||||||||||||||| |||||||||||  |||||||| | | ||| |||||||| || | ||||||| |||| | ||| ||||||||||| |||||    
T  23533702 tacattcgggacgagtttgggtatgggttcgaagtgggtacatatatcc-cattacccatcgcatacccgtattttcaaatcggggaaaacccaaaccca 23533604  T

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Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 257
Target Start/End: Complemental strand, 39456113 - 39456019
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccata 257  Q
    |||||| |||||| || ||||||||| |||||||||||||| | | | | | ||||||||||| ||||| |||||||| ||| |||||||||||||    
T  39456113 tacatttgggacgggtatgagtatgg-ttcggggtgggtacctatatacccgttacccgtcccatacccatgttttgaaatcggggaaaacccata 39456019  T

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Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 202
Target Start/End: Complemental strand, 2630670 - 2630633
Alignment:
Q  165 cattcgggacgagtttgagtatgggttcggggtgggta 202  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  2630670 cattcgggacgggtttgggtatgggttcggggtgggta 2630633  T

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Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 18683967 - 18684052
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcggg 247  Q
    |||||||||||  | ||||| ||||||||||| ||||| ||| | | |||   ||||||||||||||||||| |||||| ||||||    
T  18683967 ctacattcgggtagggtttgggtatgggttcgaggtggatacatatatccctgttacccgtcccgtacccgtattttgaaatcggg 18684052  T

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Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 240
Target Start/End: Original strand, 37217912 - 37218076
Alignment:
Q  78 tgaaagaccgagacatcgattgtgtaagtgaaatgatttaagatttggatttctatttatacagaag-gataataaattgattcactacattcgggacga 176  Q
    ||||| ||||||||   |||||||| ||| |||||||||| |  |||  |||||||||||||| ||| |||||||| ||||||  ||| |||| |||||     
T  37217912 tgaaaaaccgagactctgattgtgttagtaaaatgatttaggcattgagtttctatttatacaaaagagataataa-ttgattttctatattcaggacgg 37218010  T
Q  177 gtttgag-tatgggttcggggtgggtacttttgtcctca-ttacccgtcccgtacccgtgttttga 240  Q
    ||||| | |||| ||||||| | ||||||| | ||| |  |||||||||||||||| |||||||||    
T  37218011 gtttggggtatgagttcgggcttggtacttatatcccccgttacccgtcccgtacctgtgttttga 37218076  T

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Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 285
Target Start/End: Original strand, 42005987 - 42006015
Alignment:
Q  257 acccaaactcaatcaaagcggaaaaaatc 285  Q
    |||||||||||||||||||||||||||||    
T  42005987 acccaaactcaatcaaagcggaaaaaatc 42006015  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 195
Target Start/End: Complemental strand, 43550575 - 43550483
Alignment:
Q  104 agtgaaatgatttaagatttggatttctatttatacagaa-ggataataaattgattcactacattcgggacgagtttgagtatgggttcggg 195  Q
    |||||||||||||| | ||||| |||||||||||| |||| || |||||||| || |  | |||||| ||||| ||||| ||||| |||||||    
T  43550575 agtgaaatgatttagggtttgggtttctatttatatagaaggggtaataaatagactttccacattcaggacgggtttgtgtatgagttcggg 43550483  T

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Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 44794126 - 44794051
Alignment:
Q  163 tacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttg 239  Q
    |||||| |||||  ||||| |||||||||||||||||||||  || | ||| ||||||||| | |||||||||||||    
T  44794126 tacatttgggacaggtttgggtatgggttcggggtgggtac-cttatactcgttacccgtctcatacccgtgttttg 44794051  T

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Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 48327445 - 48327533
Alignment:
Q  169 cgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgg-gaaaacccat 256  Q
    ||||||||||||||||||| ||||| ||||| ||| | | |||  ||||| | | |||||||||| |||||| ||||| ||||||||||    
T  48327445 cgggacgagtttgagtatgtgttcgaggtggatacctatatcccaattactcataccgtacccgtattttgaaatcggagaaaacccat 48327533  T

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Target: scaffold0036 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 261
Target Start/End: Original strand, 33384 - 33481
Alignment:
Q  165 cattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 261  Q
    ||||||||||||||||| ||||||||||||||||||||| | | | | | ||||||||||| |||||||||||||| ||| ||||||||||| |||||    
T  33384 cattcgggacgagtttgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaaccca 33481  T

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Target: scaffold0198 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 20855 - 20750
Alignment:
Q  146 ataataaattgattcactacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcg 245  Q
    ||||||||||||||   ||||||||| ||| ||||||||||||||||| ||||| || || | ||| ||||||||||| | ||| || ||||||| ||||    
T  20855 ataataaattgattttttacattcggaacgggtttgagtatgggttcgaggtggatatttatatccccattacccgtctcatactcgagttttgaaatcg 20756  T
Q  246 ggaaaa 251  Q
    ||||||    
T  20755 ggaaaa 20750  T

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Target: scaffold0013 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 128206 - 128150
Alignment:
Q  177 gtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgt 233  Q
    ||||| ||||||||||||||||||||| | | ||| |||||||||||||||||||||    
T  128206 gtttgggtatgggttcggggtgggtacatatatccccattacccgtcccgtacccgt 128150  T

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Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 105554 - 105498
Alignment:
Q  177 gtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgt 233  Q
    ||||| ||||||||||||||||||||| | | |||   |||||||||||||||||||    
T  105554 gtttgggtatgggttcggggtgggtacatatatccctgttacccgtcccgtacccgt 105498  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 162 - 261
Target Start/End: Original strand, 211352 - 211452
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgg-gaaaacccataccc 260  Q
    |||||||| ||  ||||||| ||||||||||||||||||||| | | |||   ||||||||| ||||||||| |||||| ||||| ||||||||| ||||    
T  211352 ctacattcaggtagagtttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaaccc 211451  T
Q  261 a 261  Q
    |    
T  211452 a 211452  T

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Target: scaffold0519 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 332
Target Start/End: Original strand, 10342 - 10456
Alignment:
Q  219 ccgtcccgtacccgtgttttgagatcgggaaaacccatacccaaactcaatcaaagcggaaaaaa-tcgtcaatttagacttggttcaggcaagtatcca 317  Q
    ||||||| ||||||||||| || | |||||||||||||||||||||  | ||||| |||||||||  |||||| || || ||||||| | || ||| ||     
T  10342 ccgtcccatacccgtgtttggaaagcgggaaaacccatacccaaacctagtcaaaacggaaaaaacccgtcaaattggatttggttcggacaggtaaccg 10441  T
Q  318 catgtatgtgttttg 332  Q
    |||||||| ||||||    
T  10442 catgtatgggttttg 10456  T

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Target: scaffold0184 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 2957 - 3051
Alignment:
Q  162 ctacattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatc-gggaaaaccca 255  Q
    |||||||||||  | ||||||||||||||||||||||||||| | | |||   ||| |||||| |||||||| |||||| ||| |||||||||||    
T  2957 ctacattcgggtagggtttgagtatgggttcggggtgggtacatatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaaccca 3051  T

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Target: scaffold0059 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 70098 - 70172
Alignment:
Q  177 gtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    ||||| ||||||||| ||||||||||| | | ||||| ||||||||||||||||||| || ||| ||| ||||||    
T  70098 gtttgggtatgggtttggggtgggtacatatatcctcgttacccgtcccgtacccgtattatgaaatcaggaaaa 70172  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 164 - 251
Target Start/End: Complemental strand, 107489 - 107402
Alignment:
Q  164 acattcgggacgagtttgagtatgggttcggggtgggtacttttgtcctcattacccgtcccgtacccgtgttttgagatcgggaaaa 251  Q
    |||||||| |||||||||| |||| ||||||||||||||||| | ||     |||||||||| |||| ||||||||| |||| |||||    
T  107489 acattcggaacgagtttgaatatgagttcggggtgggtacttatatctatgctacccgtcccatacctgtgttttgaaatcgagaaaa 107402  T

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