View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2779_low_32 (Length: 224)
Name: NF2779_low_32
Description: NF2779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2779_low_32 |
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Alignment Details
Target: chr6 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 20843385 - 20843169
Alignment:
| Q |
1 |
tcctacttcttctttttcacacccccacaattcatcacacacacccaccctccaaacactacttccattcttcccttccctcttccaacccaaaactcac |
100 |
Q |
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| T |
20843385 |
tcctacttcttctttttcacacccccacaattcatcacacacccccaccctccaaacactacttccattcttcccttccctcttccaacccaaaactcac |
20843286 |
T |
|
| Q |
101 |
caaccctttatggctaaatgtccataaacgaatcccaaacccataatcacaacaatgtcaaaacaaaaaccacactttttccctcaaaaaaccacccaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20843285 |
caaccctttatggctaaatgtccataaacgaatcccaaacccataatcacaacaatgtcaaaacaaaaaccacactttttccctcaaaaaaccacccaat |
20843186 |
T |
|
| Q |
201 |
tttgacccttcatctca |
217 |
Q |
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||||||||||||||||| |
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| T |
20843185 |
tttgacccttcatctca |
20843169 |
T |
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