View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2780-Insertion-6 (Length: 238)
Name: NF2780-Insertion-6
Description: NF2780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2780-Insertion-6 |
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Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 27089925 - 27090140
Alignment:
| Q |
8 |
tctctttcttcaacatcttccacctctctcattcccaccaaatcattactccaacccaccaaaccaaacccaccttcattccccatcggactcaaaccca |
107 |
Q |
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| T |
27089925 |
tctctctcttcaacatcttccacctctctcattcccaccaaatcattactccaacccaccaaaccaaacccaccttcattccccatcgggctcaaaccca |
27090024 |
T |
|
| Q |
108 |
tgcccaaacaccaaactcggttcaatcctcgccgttcacgccgctgaaccagcaaaaaacccggtcctcaccgaaaagccgagcaagcctcaaccaacca |
207 |
Q |
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| T |
27090025 |
tgcccaaac-ccaaacccggttcaatcctcgccgttcacgccgctgaaccagcaaaaaacccggtcctcaccgaaaagccgagcaagcctcaaccaacca |
27090123 |
T |
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| Q |
208 |
ccatcccccgcaatgca |
224 |
Q |
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||||||||||||||||| |
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| T |
27090124 |
ccatcccccgcaatgca |
27090140 |
T |
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