View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2783_high_4 (Length: 339)
Name: NF2783_high_4
Description: NF2783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2783_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 18 - 329
Target Start/End: Complemental strand, 12322776 - 12322465
Alignment:
| Q |
18 |
attctcatcaacacgtgtctcttcatctcctctcatgaaaaataaagtaatgtgaccacaaactgaaaatgaagactttctttcttagttcttgaaattt |
117 |
Q |
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| T |
12322776 |
attctcatcaacacgtgtctcttcatctcctctcatgaaaaataaagtaatgtgaccacaaactgaaaatgaagactttctttcttagttcttgaaattt |
12322677 |
T |
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| Q |
118 |
ctgcagaatcttcttatagctgcatgtgaaaatattgcctaagaattgaaactatgaccatactatacgtaacaatgaaccactaataacatgtcacgtg |
217 |
Q |
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| T |
12322676 |
ctgcagaatcttcttatagctgcatgtgaaaatattgcctaagaattgaaactatgaccatactatacgtaacaatgaaccactaataacatgtcacgtg |
12322577 |
T |
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| Q |
218 |
ttatagcttataatcacaaacacttttgtcacctcagaacacnnnnnnngtgcactcacgaatctctctagtcacttaattggttttgttgtttatgaag |
317 |
Q |
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| T |
12322576 |
ttatagcttataatcacaaacacttttgtcacctcagaacacaaaaaaagtgcactcacgaatctctctagtcacttaattggttttgttgtttatgaag |
12322477 |
T |
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| Q |
318 |
tttctttctctg |
329 |
Q |
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|||||||||||| |
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| T |
12322476 |
tttctttctctg |
12322465 |
T |
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