View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2784-Insertion-11 (Length: 390)

Name: NF2784-Insertion-11
Description: NF2784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2784-Insertion-11
NF2784-Insertion-11
[»] chr3 (40 HSPs)
chr3 (8-195)||(5301943-5302130)
chr3 (201-390)||(54619122-54619311)
chr3 (201-390)||(38681012-38681201)
chr3 (201-390)||(47467682-47467871)
chr3 (201-386)||(27078487-27078673)
chr3 (201-386)||(27084284-27084470)
chr3 (201-390)||(36715943-36716133)
chr3 (201-386)||(8073258-8073442)
chr3 (192-390)||(3953807-3954004)
chr3 (201-390)||(21582769-21582959)
chr3 (201-390)||(34290555-34290744)
chr3 (201-386)||(42098803-42098988)
chr3 (203-380)||(36605973-36606149)
chr3 (204-390)||(37168365-37168551)
chr3 (204-390)||(44708475-44708660)
chr3 (201-390)||(43207158-43207345)
chr3 (203-390)||(53149235-53149422)
chr3 (201-389)||(50258543-50258731)
chr3 (212-388)||(18372479-18372658)
chr3 (196-390)||(53506798-53506992)
chr3 (201-387)||(50939153-50939338)
chr3 (238-388)||(9878644-9878793)
chr3 (201-390)||(54407074-54407265)
chr3 (25-174)||(10876151-10876300)
chr3 (317-390)||(29620423-29620496)
chr3 (281-384)||(54574826-54574929)
chr3 (289-384)||(8420330-8420425)
chr3 (206-389)||(48157138-48157310)
chr3 (289-384)||(32319162-32319257)
chr3 (289-379)||(28689368-28689458)
chr3 (201-262)||(29620365-29620426)
chr3 (282-379)||(49393099-49393195)
chr3 (282-384)||(25855426-25855527)
chr3 (281-367)||(26279563-26279649)
chr3 (201-268)||(48720430-48720497)
chr3 (282-384)||(789940-790042)
chr3 (36-134)||(24678127-24678225)
chr3 (293-346)||(23641329-23641382)
chr3 (281-357)||(42453435-42453511)
chr3 (281-384)||(52374660-52374763)
[»] chr6 (24 HSPs)
chr6 (201-390)||(13727318-13727507)
chr6 (201-390)||(21280543-21280732)
chr6 (201-390)||(21479492-21479682)
chr6 (201-388)||(20711639-20711826)
chr6 (201-390)||(27788609-27788796)
chr6 (200-390)||(33774115-33774306)
chr6 (201-390)||(17353952-17354141)
chr6 (201-390)||(30832444-30832632)
chr6 (201-390)||(19737613-19737800)
chr6 (201-390)||(24710915-24711107)
chr6 (202-380)||(1155767-1155947)
chr6 (286-390)||(28075781-28075885)
chr6 (201-362)||(27314098-27314259)
chr6 (281-389)||(34397856-34397964)
chr6 (208-390)||(235151-235334)
chr6 (288-384)||(2477590-2477686)
chr6 (288-384)||(6159442-6159538)
chr6 (293-384)||(21183686-21183777)
chr6 (289-384)||(20611794-20611889)
chr6 (305-383)||(4036953-4037031)
chr6 (282-367)||(30121783-30121868)
chr6 (206-259)||(19987277-19987330)
chr6 (338-382)||(27994775-27994819)
chr6 (214-268)||(28075906-28075960)
[»] chr2 (36 HSPs)
chr2 (201-390)||(4505888-4506077)
chr2 (201-390)||(3155211-3155400)
chr2 (203-390)||(6965001-6965186)
chr2 (201-390)||(12337366-12337556)
chr2 (201-390)||(8906997-8907187)
chr2 (205-390)||(29939786-29939970)
chr2 (201-390)||(26716122-26716312)
chr2 (201-390)||(3953000-3953187)
chr2 (203-368)||(34693991-34694155)
chr2 (203-368)||(34716403-34716567)
chr2 (204-358)||(40636164-40636317)
chr2 (201-387)||(24410434-24410622)
chr2 (201-390)||(27506660-27506848)
chr2 (203-390)||(10762488-10762673)
chr2 (201-390)||(9046023-9046212)
chr2 (201-386)||(7162782-7162966)
chr2 (206-358)||(5952642-5952791)
chr2 (281-384)||(16097008-16097111)
chr2 (281-382)||(24035544-24035645)
chr2 (201-313)||(1396618-1396730)
chr2 (283-384)||(38400798-38400899)
chr2 (281-384)||(13800543-13800647)
chr2 (281-384)||(12134039-12134142)
chr2 (281-384)||(21665699-21665802)
chr2 (281-384)||(28425709-28425812)
chr2 (281-384)||(7742132-7742236)
chr2 (282-384)||(16227368-16227470)
chr2 (205-321)||(8327681-8327796)
chr2 (216-384)||(11912691-11912859)
chr2 (315-384)||(37182670-37182739)
chr2 (310-378)||(22727530-22727598)
chr2 (37-88)||(16485936-16485987)
chr2 (282-361)||(42029168-42029247)
chr2 (281-322)||(22727456-22727497)
chr2 (289-325)||(10252475-10252511)
chr2 (282-318)||(11952588-11952624)
[»] chr5 (46 HSPs)
chr5 (208-390)||(34756289-34756471)
chr5 (201-390)||(15480007-15480194)
chr5 (201-390)||(36187796-36187984)
chr5 (201-390)||(27079006-27079196)
chr5 (201-390)||(38869280-38869468)
chr5 (203-390)||(30854324-30854511)
chr5 (204-390)||(19523194-19523380)
chr5 (205-390)||(2274885-2275070)
chr5 (201-390)||(16198710-16198899)
chr5 (201-390)||(16591991-16592179)
chr5 (201-380)||(31194529-31194706)
chr5 (201-390)||(28822253-28822447)
chr5 (209-390)||(9364286-9364467)
chr5 (201-385)||(22986474-22986658)
chr5 (201-389)||(16799241-16799431)
chr5 (281-387)||(23284058-23284164)
chr5 (201-383)||(27924084-27924266)
chr5 (201-380)||(31881349-31881528)
chr5 (286-390)||(40389537-40389641)
chr5 (214-363)||(7338021-7338170)
chr5 (201-390)||(7670919-7671117)
chr5 (281-382)||(36868872-36868973)
chr5 (281-384)||(1366522-1366625)
chr5 (281-384)||(33037781-33037884)
chr5 (282-384)||(14318382-14318484)
chr5 (281-381)||(2024638-2024738)
chr5 (289-384)||(2530901-2530996)
chr5 (281-384)||(34425904-34426007)
chr5 (289-381)||(26718953-26719045)
chr5 (289-381)||(26988697-26988789)
chr5 (281-384)||(11242314-11242417)
chr5 (282-384)||(2412089-2412191)
chr5 (289-383)||(24395741-24395835)
chr5 (281-382)||(10407464-10407565)
chr5 (289-376)||(10543682-10543769)
chr5 (281-384)||(40794323-40794426)
chr5 (283-373)||(22648734-22648824)
chr5 (282-384)||(41911614-41911716)
chr5 (288-372)||(17344969-17345053)
chr5 (201-268)||(23283944-23284011)
chr5 (208-265)||(40389461-40389518)
chr5 (281-325)||(606214-606258)
chr5 (304-384)||(15639644-15639724)
chr5 (281-325)||(27530543-27530587)
chr5 (288-324)||(22875003-22875039)
chr5 (281-321)||(35080766-35080806)
[»] chr7 (40 HSPs)
chr7 (201-390)||(18776684-18776873)
chr7 (201-390)||(29077215-29077403)
chr7 (203-390)||(8171460-8171646)
chr7 (201-390)||(12596208-12596394)
chr7 (201-390)||(20091198-20091388)
chr7 (201-363)||(26254015-26254177)
chr7 (201-389)||(10329328-10329516)
chr7 (201-390)||(23550989-23551178)
chr7 (281-390)||(10955479-10955588)
chr7 (201-385)||(19692094-19692278)
chr7 (201-390)||(38414794-38414983)
chr7 (201-380)||(28749715-28749894)
chr7 (201-390)||(47984886-47985077)
chr7 (288-390)||(24525690-24525792)
chr7 (201-390)||(48983757-48983951)
chr7 (202-386)||(8239686-8239869)
chr7 (201-390)||(25010428-25010610)
chr7 (282-381)||(9021799-9021898)
chr7 (201-362)||(33162257-33162418)
chr7 (281-384)||(2611260-2611363)
chr7 (289-381)||(23859077-23859169)
chr7 (281-384)||(7398452-7398555)
chr7 (282-373)||(6765680-6765771)
chr7 (289-384)||(36891579-36891674)
chr7 (283-381)||(36902924-36903022)
chr7 (281-373)||(23744808-23744900)
chr7 (289-384)||(12981327-12981422)
chr7 (281-384)||(27237421-27237524)
chr7 (206-268)||(40357303-40357365)
chr7 (288-384)||(18201138-18201234)
chr7 (289-380)||(20153206-20153297)
chr7 (25-136)||(20528464-20528575)
chr7 (281-384)||(12419493-12419596)
chr7 (201-268)||(24525600-24525667)
chr7 (282-368)||(21763586-21763672)
chr7 (297-383)||(23020498-23020583)
chr7 (305-383)||(38971255-38971333)
chr7 (330-370)||(40357413-40357453)
chr7 (282-324)||(9014177-9014219)
chr7 (201-266)||(10955605-10955670)
[»] chr8 (35 HSPs)
chr8 (201-390)||(2952138-2952329)
chr8 (203-390)||(30883324-30883512)
chr8 (203-390)||(13534609-13534794)
chr8 (203-390)||(13624149-13624334)
chr8 (201-390)||(3048436-3048625)
chr8 (201-390)||(45475812-45476000)
chr8 (201-390)||(23606549-23606737)
chr8 (201-390)||(23798180-23798369)
chr8 (201-390)||(42600777-42600966)
chr8 (201-385)||(37430077-37430261)
chr8 (211-386)||(5860671-5860848)
chr8 (201-390)||(41879176-41879363)
chr8 (201-390)||(10917386-10917574)
chr8 (281-384)||(7944521-7944624)
chr8 (304-384)||(5942697-5942777)
chr8 (289-384)||(8102913-8103008)
chr8 (281-384)||(41677172-41677276)
chr8 (281-384)||(5973106-5973209)
chr8 (281-384)||(11290185-11290288)
chr8 (281-379)||(34789861-34789959)
chr8 (282-384)||(39332405-39332507)
chr8 (281-384)||(15167414-15167517)
chr8 (290-384)||(5721560-5721654)
chr8 (289-384)||(15078759-15078854)
chr8 (281-376)||(8646215-8646309)
chr8 (289-384)||(25561502-25561595)
chr8 (201-268)||(20003729-20003796)
chr8 (282-361)||(30674403-30674482)
chr8 (282-384)||(14509983-14510084)
chr8 (288-361)||(23941097-23941170)
chr8 (282-325)||(9108553-9108596)
chr8 (282-381)||(34048705-34048806)
chr8 (289-325)||(34868184-34868220)
chr8 (312-348)||(5757117-5757153)
chr8 (281-321)||(38009151-38009191)
[»] chr1 (43 HSPs)
chr1 (201-390)||(44655747-44655935)
chr1 (201-390)||(5316686-5316874)
chr1 (201-390)||(14146306-14146494)
chr1 (201-390)||(23185433-23185621)
chr1 (201-390)||(5027555-5027745)
chr1 (201-386)||(17168966-17169150)
chr1 (201-390)||(6771797-6771988)
chr1 (203-390)||(50881436-50881621)
chr1 (201-390)||(3406424-3406613)
chr1 (201-390)||(3440207-3440396)
chr1 (201-390)||(4971537-4971725)
chr1 (206-390)||(16140061-16140244)
chr1 (201-390)||(27906647-27906824)
chr1 (201-390)||(9172941-9173130)
chr1 (201-390)||(9180923-9181112)
chr1 (201-390)||(19955723-19955911)
chr1 (201-390)||(40501708-40501897)
chr1 (201-375)||(21740853-21741029)
chr1 (281-390)||(27559643-27559752)
chr1 (217-390)||(41697072-41697244)
chr1 (201-361)||(22865379-22865538)
chr1 (283-390)||(1366878-1366985)
chr1 (205-388)||(51607363-51607545)
chr1 (201-373)||(6889634-6889804)
chr1 (201-373)||(6891480-6891650)
chr1 (25-189)||(19242383-19242547)
chr1 (203-390)||(13913401-13913589)
chr1 (282-384)||(38547035-38547137)
chr1 (281-384)||(39134720-39134824)
chr1 (281-384)||(45758506-45758609)
chr1 (289-384)||(43235774-43235871)
chr1 (282-384)||(26803960-26804059)
chr1 (216-390)||(44895658-44895827)
chr1 (281-382)||(5533326-5533428)
chr1 (281-379)||(38853539-38853637)
chr1 (206-268)||(34247154-34247216)
chr1 (288-384)||(33170771-33170867)
chr1 (281-384)||(50146308-50146411)
chr1 (282-384)||(6221690-6221791)
chr1 (289-371)||(35392295-35392376)
chr1 (281-344)||(17322621-17322684)
chr1 (281-381)||(10925951-10926052)
chr1 (330-370)||(34247066-34247106)
[»] scaffold0070 (1 HSPs)
scaffold0070 (201-390)||(1338-1526)
[»] chr4 (55 HSPs)
chr4 (212-390)||(38209520-38209698)
chr4 (204-390)||(47128987-47129172)
chr4 (201-390)||(54780777-54780967)
chr4 (201-390)||(34768493-34768681)
chr4 (201-390)||(32915385-32915574)
chr4 (214-390)||(43455463-43455638)
chr4 (201-390)||(32128584-32128773)
chr4 (201-390)||(34027579-34027767)
chr4 (201-390)||(10978900-10979091)
chr4 (201-385)||(37777141-37777325)
chr4 (201-390)||(2790660-2790848)
chr4 (204-390)||(1105532-1105717)
chr4 (201-390)||(55255269-55255446)
chr4 (201-390)||(48209240-48209435)
chr4 (201-390)||(5128759-5128949)
chr4 (201-390)||(19498504-19498690)
chr4 (201-386)||(54083161-54083345)
chr4 (201-390)||(16845021-16845209)
chr4 (201-390)||(10428117-10428312)
chr4 (203-384)||(35779248-35779426)
chr4 (282-390)||(37514659-37514767)
chr4 (201-390)||(16882314-16882502)
chr4 (201-358)||(17679432-17679588)
chr4 (201-390)||(40089516-40089713)
chr4 (291-390)||(13460207-13460306)
chr4 (211-390)||(35465107-35465284)
chr4 (206-390)||(38352189-38352362)
chr4 (203-362)||(51964736-51964897)
chr4 (281-384)||(52468292-52468395)
chr4 (302-384)||(4167910-4167992)
chr4 (281-348)||(51691913-51691980)
chr4 (288-384)||(27112036-27112132)
chr4 (288-384)||(36118463-36118559)
chr4 (201-363)||(16922246-16922409)
chr4 (281-354)||(9578662-9578736)
chr4 (281-390)||(24969437-24969536)
chr4 (288-378)||(36178684-36178774)
chr4 (281-361)||(39655252-39655332)
chr4 (281-384)||(10041998-10042101)
chr4 (331-390)||(23509846-23509905)
chr4 (281-384)||(24396940-24397043)
chr4 (288-384)||(2135326-2135422)
chr4 (290-384)||(37744916-37745011)
chr4 (281-383)||(39329390-39329492)
chr4 (205-336)||(23508432-23508564)
chr4 (281-376)||(36362869-36362964)
chr4 (295-384)||(40217238-40217327)
chr4 (291-383)||(15735102-15735189)
chr4 (288-384)||(45656181-45656277)
chr4 (282-325)||(24614018-24614061)
chr4 (201-268)||(24969718-24969785)
chr4 (281-323)||(30507120-30507162)
chr4 (227-271)||(2975369-2975413)
chr4 (201-255)||(13460305-13460359)
chr4 (296-346)||(29425187-29425237)
[»] scaffold0039 (1 HSPs)
scaffold0039 (201-390)||(106533-106722)
[»] scaffold1590 (1 HSPs)
scaffold1590 (281-384)||(257-360)
[»] scaffold0012 (1 HSPs)
scaffold0012 (289-384)||(206496-206591)
[»] scaffold0018 (1 HSPs)
scaffold0018 (288-384)||(173516-173612)
[»] scaffold0097 (1 HSPs)
scaffold0097 (288-384)||(38926-39022)
[»] scaffold0182 (1 HSPs)
scaffold0182 (282-382)||(23993-24093)
[»] scaffold1320 (1 HSPs)
scaffold1320 (289-384)||(1355-1450)
[»] scaffold0001 (2 HSPs)
scaffold0001 (201-324)||(183121-183243)
scaffold0001 (335-388)||(181916-181969)
[»] scaffold0007 (1 HSPs)
scaffold0007 (281-383)||(230858-230960)
[»] scaffold0022 (2 HSPs)
scaffold0022 (281-384)||(40086-40191)
scaffold0022 (281-384)||(138146-138251)
[»] scaffold0227 (2 HSPs)
scaffold0227 (317-384)||(16028-16095)
scaffold0227 (282-325)||(16125-16168)
[»] scaffold0003 (1 HSPs)
scaffold0003 (308-361)||(351360-351413)
[»] scaffold0229 (1 HSPs)
scaffold0229 (292-389)||(23879-23976)


Alignment Details
Target: chr3 (Bit Score: 156; Significance: 9e-83; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 8 - 195
Target Start/End: Original strand, 5301943 - 5302130
Alignment:
Q  8 agtagaagttgaatgtctacacaaaagcgtctctatgttagcttattgtgtgtagcaaacacaagatcgctaactcttaaccatctaatgaatacttgtt 107  Q
    |||||||||||||||| ||||||| || ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5301943 agtagaagttgaatgtgtacacaagagtgtctccatgttagcttattatgtgtagcaaacacaagatcgctaactcttaactatctaatgaatacttgtt 5302042  T
Q  108 gcacaaataatcattctctaactaactacctaacagtctaatgattacttgctacgtaagtaatccttctttaactaatatggtgtga 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  5302043 gcacaaataatcattctctaactaactacctaacagtctaatgattacttgctacgcaagtaatccttctttaactgatatggtgtga 5302130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 54619122 - 54619311
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||| | || |||||||||||||||||||        ||||||||||||||||||||    
T  54619122 agggccgtccctgagaattcggaggctcggctctggaaatgaaaagaagccaatgataaaatcaaaacataattttttttaaaagagcaatgttctattt 54619221  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54619222 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 54619311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 38681012 - 38681201
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||    
T  38681012 agggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctattt 38681111  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  38681112 atattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaaaccccacc 38681201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 47467871 - 47467682
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||| |           ||||||| |||||||||||    
T  47467871 agggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtgttttttttttaaagagcgatgttctattt 47467772  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47467771 atattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 47467682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 201 - 386
Target Start/End: Original strand, 27078487 - 27078673
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatt 299  Q
    ||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||         |||| ||||||||||||||    
T  27078487 agggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacataatttttttttaaaaaagcaatgttctatt 27078586  T
Q  300 tatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccc 386  Q
    |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  27078587 tatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccc 27078673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 201 - 386
Target Start/End: Original strand, 27084284 - 27084470
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatt 299  Q
    ||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||         |||| ||||||||||||||    
T  27084284 agggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacataatttttttttaaaaaagcaatgttctatt 27084383  T
Q  300 tatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccc 386  Q
    |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  27084384 tatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccc 27084470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 36715943 - 36716133
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatt 299  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| |||||||||         |||||||||||||||||||    
T  36715943 agggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaataaaaacataatttttatttaaaagagcaatgttctatt 36716042  T
Q  300 tatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| ||||| |||||||||    
T  36716043 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgagggacccccacc 36716133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 201 - 386
Target Start/End: Original strand, 8073258 - 8073442
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||         ||||||| ||||||||||||    
T  8073258 agggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgta-ttttttttaaaagagtaatgttctattt 8073356  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccc 386  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  8073357 atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccc 8073442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 192 - 390
Target Start/End: Original strand, 3953807 - 3954004
Alignment:
Q  192 gtgatatctagggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaat 291  Q
    ||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||||||| ||||  ||         |||||| ||||    
T  3953807 gtgatatgtagggccgtccctgagaattcggaggttccgctctggaaatgaaaagaggccagtgataaaattaaaatgta-ttttttttaaaagaacaat 3953905  T
Q  292 gttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  3953906 gttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacccccacc 3954004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 21582959 - 21582769
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatt 299  Q
    ||||||||||||||||||||||||| |||||| | | |||||||||||| |||||||||||||||||| ||          |||||| ||||||| ||||    
T  21582959 agggccgtccctgagaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagaacaatgttttatt 21582860  T
Q  300 tatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21582859 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 21582769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 34290555 - 34290744
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||| | |||||||||||| |||||||| | |||||||||| |||||||||||||||||||| ||         |||| | |||||||||||||    
T  34290555 agggccgtccttaagaattcggaggctcggctctgggaatgaaaagaagtcagtgataaaatcaaaacgtatttttttttaaaaaaacaatgttctattt 34290654  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  34290655 atattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacc 34290744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 201 - 386
Target Start/End: Complemental strand, 42098988 - 42098803
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||| ||| || ||||  |||||||||||||| |||||||||||||||||  |          |||||||| |||||||||||    
T  42098988 agggccgtccctgagaattcgaaggctcagctcgggaaatgaaaagaggccagtgataaaatcaaaatgtctttttttttaaaagagcgatgttctattt 42098889  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccc 386  Q
    ||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  42098888 atattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgaggaacccc 42098803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 203 - 380
Target Start/End: Complemental strand, 36606149 - 36605973
Alignment:
Q  203 ggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttat 302  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||         || |||||||||||||||||||    
T  36606149 ggccgtccctgaaaattcggaggttcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgta-ttttttttaatagagcaatgttctatttat 36606051  T
Q  303 attttttaaaa-gataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  36606050 attttttaaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacatgagg 36605973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 204 - 390
Target Start/End: Complemental strand, 37168551 - 37168365
Alignment:
Q  204 gccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttata 303  Q
    ||||||||| |||||||||||| |||||||| | |||||||||||| |||||||||||||||||| ||         |||| | ||||||||||||||||    
T  37168551 gccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaacaatgttctatttata 37168452  T
Q  304 ttttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||| ||| ||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||    
T  37168451 ttttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgaggaactcccacc 37168365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 204 - 390
Target Start/End: Complemental strand, 44708660 - 44708475
Alignment:
Q  204 gccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttata 303  Q
    ||||||||| |||||||||||| ||  |||| | |||||||||||| |||||||||||||||||| ||         |||| || |||||||||||||||    
T  44708660 gccgtccctaagaattcggaggctcaactctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaa-agaaatgttctatttata 44708562  T
Q  304 ttttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||| ||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44708561 ttttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 44708475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 43207158 - 43207345
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||| ||||| |||||||| | |||||||||||| |||||||||| | ||||| ||         ||||||||||||||||||||    
T  43207158 agggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaattaaaaacgta-ttttttttaaaagagcaatgttctattt 43207256  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||    
T  43207257 atattttttaaaagataaatataaggtgccgtatatatgcggtaca-tcaaaggtgaaaatgactaccgtatacatgaggaacccccacc 43207345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 203 - 390
Target Start/End: Original strand, 53149235 - 53149422
Alignment:
Q  203 ggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttat 302  Q
    ||||||| ||||||||||||||| || | ||  | |||||||||||  |||||||||||||||||| |          |||||||| |||||||||||||    
T  53149235 ggccgtctctgagaattcggaggctcagttcggggaatgaaaagagaccagtgataaaatcaaaacgtttttttttttaaaagagcgatgttctatttat 53149334  T
Q  303 attttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||    
T  53149335 attttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgaggaacccccacc 53149422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 201 - 389
Target Start/End: Original strand, 50258543 - 50258731
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||| |||||||||||||||| |||||||| | || |||||||| ||||||||||||||||||||||         |||||||| |||||||||||    
T  50258543 agggccgttcctgagaattcggaggctcggctctgggaacgaaaagagatcagtgataaaatcaaaacata-tttttttaaaaagagcgatgttctattt 50258641  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccaga-ggtgaaaatgactaccgtatacatgaggaacccccac 389  Q
    ||||||||||||| ||||||||||| || |||||||||||||||||||| || ||||||||||||||  |||| ||||||||||||||||    
T  50258642 atattttttaaaaaataaatacaaggtgtcgtatatatgcggtacacccggagggtgaaaatgactattgtatgcatgaggaacccccac 50258731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 212 - 388
Target Start/End: Complemental strand, 18372658 - 18372479
Alignment:
Q  212 tgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaa 311  Q
    |||||||||||||| ||| | || | ||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||    
T  18372658 tgagaattcggaggctcgacactgggaatgaaaagaggtcagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatttatattttttaa 18372560  T
Q  312 aagataaatacaagatgccgtatatat----gcggtacacccagaggtgaaaatgactaccgtatacatgaggaaccccca 388  Q
    |||||||||||||| || |||||||||    ||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  18372559 aagataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacatgaggaatcccca 18372479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 196 - 390
Target Start/End: Original strand, 53506798 - 53506992
Alignment:
Q  196 tatctagggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgtt 294  Q
    |||| |||||||||| | |||||||| ||| |||||||| | |||||| ||||| |||||||||||||||||||||          |||| | |||||||    
T  53506798 tatccagggccgtcc-taagaattcgaaggctcggctctgggaatgaagagaggccagtgataaaatcaaaacatattttttttttaaaaaaacaatgtt 53506896  T
Q  295 ctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  53506897 ctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc 53506992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 201 - 387
Target Start/End: Original strand, 50939153 - 50939338
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| ||||||||| || ||||||||   |||||||||||| |||||||||||||||||| ||         |||| ||||||| |||||||    
T  50939153 agggccgtccctaagaattcgggggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaa-agcaatgatctattt 50939251  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaaccccc 387  Q
    ||||||||||||||||||||| ||| ||||||||||||  |||||||||| |||| |||||||||||||||||||||||||||||||    
T  50939252 atattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgaggaaccccc 50939338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 238 - 388
Target Start/End: Original strand, 9878644 - 9878793
Alignment:
Q  238 aatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatata 337  Q
    |||||||||||||||||||||||||| |||| ||         ||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||    
T  9878644 aatgaaaagaggtcagtgataaaatctaaacgta-ttttttttaaaagagcaatattctatttatattttttaaaagataaatataaggtgcagtatata 9878742  T
Q  338 tgcggtacacccagaggtgaaaatgactaccgtatacatgaggaaccccca 388  Q
    ||||||||||||| ||||||||||||||| ||||||||| |||||||||||    
T  9878743 tgcggtacacccaaaggtgaaaatgactatcgtatacataaggaaccccca 9878793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 54407074 - 54407265
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagag---caatgttcta 297  Q
    |||||||||||| |||||||||||| |||||||| | |||||||||||| | |||||||||||||||| |          |||| |    ||||||||||    
T  54407074 agggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtttttttttttaaaaaaaaaacaatgttcta 54407173  T
Q  298 tttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||||||||||    
T  54407174 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat-agtaacccccacc 54407265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 174
Target Start/End: Original strand, 10876151 - 10876300
Alignment:
Q  25 tacacaaaagcgtctctatgttagcttattgtgtgtagcaaacacaagatcgctaactcttaaccatctaatgaatacttgttgcacaaataatcattct 124  Q
    ||||||| || |||||||||||||||||   |||||| ||||||||| ||| |||| ||||||| || |||||| |||||||||||||| ||||||||||    
T  10876151 tacacaagagtgtctctatgttagcttaccatgtgtaacaaacacaatatcactaagtcttaactatataatgattacttgttgcacaagtaatcattct 10876250  T
Q  125 ctaactaactacctaacagtctaatgattacttgctacgtaagtaatcct 174  Q
    ||||| || |  || || |||||||||||||||||| || ||||||||||    
T  10876251 ctaacaaattttcttactgtctaatgattacttgctgcgcaagtaatcct 10876300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 317 - 390
Target Start/End: Original strand, 29620423 - 29620496
Alignment:
Q  317 aaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  29620423 aaatacaaggtgccgtatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacccccacc 29620496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 54574826 - 54574929
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| |||||| |||| ||||||||||| | |||||||||||||||||||||| | || ||||| |||||| |||||||||||    
T  54574826 aaaagaacaatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgagg 54574925  T
Q  381 aacc 384  Q
    ||||    
T  54574926 aacc 54574929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 289 - 384
Target Start/End: Complemental strand, 8420425 - 8420330
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||  ||||||||| | |||||||| ||| ||||||| | ||||||||    
T  8420425 aatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaatcactgccgtatatacgaggaacc 8420330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 389
Target Start/End: Complemental strand, 48157310 - 48157138
Alignment:
Q  206 cgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 305  Q
    ||||||| |||||||||||| |||| ||  | ||| |||||||| ||||||||||||||||||| |         ||||  |||||| ||||||||||||    
T  48157310 cgtccctaagaattcggaggctcggttccgggaataaaaagaggccagtgataaaatcaaaacacatttttaaaaaaaat-gcaatgatctatttatatt 48157212  T
Q  306 ttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccac 389  Q
    |||||||||||||||| ||| ||          |||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  48157211 ttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccac 48157138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 384
Target Start/End: Original strand, 32319162 - 32319257
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||||||||||| ||||||||||||||||||||||  ||  |||||||||||||||||||| |||||||||| |||| | |||| | ||||||||    
T  32319162 aatgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaattactatcttatatacgaggaacc 32319257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 289 - 379
Target Start/End: Original strand, 28689368 - 28689458
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 379  Q
    ||||||||||||| |||||  |||||||||||||||| ||||||||||||||| || | ||| |||||||||| ||| |||||||||||||    
T  28689368 aatgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgag 28689458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 29620365 - 29620426
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaat 262  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||    
T  29620365 agggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaat 29620426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 379
Target Start/End: Complemental strand, 49393195 - 49393099
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 379  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||  | ||||||||||  ||||||||| |||| ||||| |||||||||||||||||    
T  49393195 aaagaacaatgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatg-tgtacacccaaaggtaaaaattactaccgtatacatgag 49393099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 384
Target Start/End: Complemental strand, 25855527 - 25855426
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    ||||| |||||||||||||| |||||||||||||| |||||||| || ||||||||||  || |||||| || ||||||| ||||||||||||| || ||    
T  25855527 aaagaacaatgttctatttaaattttttaaaagat-aatacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtatacacgaaga 25855429  T
Q  382 acc 384  Q
    |||    
T  25855428 acc 25855426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 26279649 - 26279563
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactac 367  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||| || |||||||||||  |||||||| || ||||||| |||||    
T  26279649 aaaagaacaatgttctatttaaattttttaaaagataaatagaaggtgtcgtatatatgcaatacacccaaagatgaaaatcactac 26279563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 48720430 - 48720497
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaac 268  Q
    |||||||||||| |||||| ||||| |||||||| | ||||||||||||| |||||||||||||||||    
T  48720430 agggccgtccctaagaattgggaggctcggctctgggaatgaaaagaggtaagtgataaaatcaaaac 48720497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 384
Target Start/End: Complemental strand, 790042 - 789940
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    ||||| |||| ||||||||| ||||||||||  ||||||||||| || | ||||||||  ||||||||| |||| ||||| || ||| ||||||||||||    
T  790042 aaagaacaatcttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgagga 789943  T
Q  382 acc 384  Q
    |||    
T  789942 acc 789940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 24678225 - 24678127
Alignment:
Q  36 gtctctatgttagcttattgtgtgtagcaaacacaagatcgctaactcttaaccatctaatgaatacttgttgcacaaataatcattctctaactaact 134  Q
    ||||| ||||||||||||| |||||  ||||||  |||||||||||||||||| || |||||| | ||| || ||||  ||||||||||||||||||||    
T  24678225 gtctcgatgttagcttattatgtgtgacaaacatgagatcgctaactcttaactatttaatgattccttattacacacgtaatcattctctaactaact 24678127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 23641329 - 23641382
Alignment:
Q  293 ttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtaca 346  Q
    ||||||||||||||||||||||||||||||||  || |||||||||||||||||    
T  23641329 ttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 357
Target Start/End: Complemental strand, 42453511 - 42453435
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtga 357  Q
    |||||| |||||||| ||||| ||||||||||||||||||||||| || | |||||||||| |||||| | ||||||    
T  42453511 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 42453435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 281 - 384
Target Start/End: Complemental strand, 52374763 - 52374660
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| |||||||   | ||||||||||  || |||||| ||||| |||| | | ||| |||||| |||||||||||||||| |    
T  52374763 aaaagaacaatgttctatttaaatttttttttaaataaatacaatgtgtcgtatagatgcgatacatctaaaggagaaaatcactaccgtatacatgaag 52374664  T
Q  381 aacc 384  Q
    ||||    
T  52374663 aacc 52374660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 3e-79; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 13727318 - 13727507
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||    
T  13727318 agggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctattt 13727417  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13727418 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 13727507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 21280732 - 21280543
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||    
T  21280732 agggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctattt 21280633  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  21280632 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaactcccacc 21280543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 21479682 - 21479492
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatt 299  Q
    ||||||||| ||||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||         |||||||||||||||||||    
T  21479682 agggccgtctctgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagcaatgttctatt 21479583  T
Q  300 tatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21479582 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 21479492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 201 - 388
Target Start/End: Original strand, 20711639 - 20711826
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||| |||||||||||||||||||| |||| ||| | ||||||||||||||||| ||||||||||||| ||         ||||||||||||||||||||    
T  20711639 agggacgtccctgagaattcggaggctcggttctgggaatgaaaagaggtcagtcataaaatcaaaacgtatttttttttaaaagagcaatgttctattt 20711738  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaaccccca 388  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20711739 atattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccccca 20711826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 27788609 - 27788796
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||||||||| |||||||| | |||||||||||| |||||||||||||||||| ||         ||||||||||| ||||||||    
T  27788609 agggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta--tttttttaaaagagcaattttctattt 27788706  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27788707 atattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 27788796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 200 - 390
Target Start/End: Complemental strand, 33774306 - 33774115
Alignment:
Q  200 tagggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctat 298  Q
    ||||||| ||| |||||||||||||| ||||||||  ||||||||||||| |||| |||||||||||||||||         ||||||| ||||||||||    
T  33774306 tagggccatccttgagaattcggaggctcggctctgaaaatgaaaagaggccagtaataaaatcaaaacataatttttttttaaaagagtaatgttctat 33774207  T
Q  299 ttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  33774206 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacccccacc 33774115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 17354141 - 17353952
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||||||||| ||| |||| | ||||||||||||||||||||||||||||||| ||         |||| |||||||||||||||    
T  17354141 agggccgtccctaagaattcggaggctcgactcttggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaaaaagcaatgttctattt 17354042  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||| | ||||||||||||| ||||||||||| |||||||||||    
T  17354041 atattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgatgaacccccacc 17353952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 30832444 - 30832632
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||| ||| |||||||| | |||||||||||| |||||||||||||||||| ||         ||||| || |||||||||||    
T  30832444 agggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-tttttttaaaaagcgcgatgttctattt 30832542  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    | ||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  30832543 acattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaacccccacc 30832632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 19737613 - 19737800
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||| |||||||||||||| | ||| |||||||||| | |||||||||| |||||||||||||||||  |          ||||||||||||||||||||    
T  19737613 agggtcgtccctgagaatttgaaggttcggctctagga-tgaaaagaggccagtgataaaatcaaaatgtt-ttttttttaaaagagcaatgttctattt 19737710  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19737711 atatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacc 19737800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 24710915 - 24711107
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnna---aaagagcaatgttcta 297  Q
    ||||||||||||||||||||||||| || ||||  | ||||||||||||| ||||||||||||||||| |              ||||||  ||||||||    
T  24710915 agggccgtccctgagaattcggaggctcagctcagggaatgaaaagaggttagtgataaaatcaaaacgtttttttttttttttaaagagtgatgttcta 24711014  T
Q  298 tttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24711015 tttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaacccccacc 24711107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 202 - 380
Target Start/End: Original strand, 1155767 - 1155947
Alignment:
Q  202 gggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnna--aaagagcaatgttctatt 299  Q
    ||||||||||| | |||| ||||| |||| ||||| ||||||||||||||||||||||||||||||  |||           ||||||||||||||||||    
T  1155767 gggccgtccctaaaaatttggaggctcggttctaggaatgaaaagaggtcagtgataaaatcaaaaagtaatttttttttttaaagagcaatgttctatt 1155866  T
Q  300 tatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||||||||||||||||||||||| || | ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1155867 tatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 1155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 286 - 390
Target Start/End: Complemental strand, 28075885 - 28075781
Alignment:
Q  286 agcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaaccc 385  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  28075885 agcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaaccc 28075786  T
Q  386 ccacc 390  Q
    |||||    
T  28075785 ccacc 28075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 201 - 362
Target Start/End: Original strand, 27314098 - 27314259
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||||| |||||||||| ||| |||| | |||||||||||| |||||||||||||||||| ||         ||||||||||||||||||||    
T  27314098 agggccgtccctgaaaattcggaggctcgactctgggaatgaaaagaggccagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctattt 27314196  T
Q  301 atattttttaaaa-gataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatg 362  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  27314197 atattttttaaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatg 27314259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 34397964 - 34397856
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| | |||| |||||||||| |||| ||||||||    
T  34397964 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgagg 34397865  T
Q  381 aacccccac 389  Q
    |||| ||||    
T  34397864 aacctccac 34397856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 390
Target Start/End: Original strand, 235151 - 235334
Alignment:
Q  208 tccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatttt 307  Q
    ||||| |||||||||||| |||||| |   |||||||||||  |||||||||||||||||| ||         |||| ||||||| ||||||||||||||    
T  235151 tccctaagaattcggaggttcggctatgagaatgaaaagagaccagtgataaaatcaaaacgtatttttttttaaaa-agcaatgatctatttatatttt 235249  T
Q  308 ttaaaagataaatacaagatgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||| ||| |||||  ||||||| | ||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  235250 ttaaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaaacccccacc 235334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 384
Target Start/End: Original strand, 2477590 - 2477686
Alignment:
Q  288 caatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    |||||||| ||||| ||||||||||||||||||||||| || | |||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  2477590 caatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 2477686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 384
Target Start/End: Complemental strand, 6159538 - 6159442
Alignment:
Q  288 caatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    |||||||||||||||||||||||||||||||||||||  || |||||||||||||||||  || ||||| |||| ||||||||||| || |||||||    
T  6159538 caatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaatcactaccgtatatataaggaacc 6159442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 293 - 384
Target Start/End: Original strand, 21183686 - 21183777
Alignment:
Q  293 ttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||||||| ||||||||||||||||||||||  |  |||||||||| |||||||||| || ||||||| ||||||||||||||||||||||    
T  21183686 ttctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacc 21183777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 384
Target Start/End: Complemental strand, 20611889 - 20611794
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||||||| ||| |||||||||| |||||||||||| || ||||||||| ||  ||| ||| |||||||||| ||||||||||||||||||||||    
T  20611889 aatgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacc 20611794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 305 - 383
Target Start/End: Complemental strand, 4037031 - 4036953
Alignment:
Q  305 tttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaac 383  Q
    ||||||| ||||||||||||| ||||||||||||  |||||||||| |||| || || ||||||||||| |||||||||    
T  4037031 tttttaagagataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaac 4036953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 282 - 367
Target Start/End: Complemental strand, 30121868 - 30121783
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactac 367  Q
    ||||| ||||||| |||||| ||||||||||| ||||||||||| || | |||||||||| |||| ||| |||||||||| |||||    
T  30121868 aaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaatcactac 30121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 19987330 - 19987277
Alignment:
Q  206 cgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataa 259  Q
    ||||||| |||||||||||||||||||||   ||||||||||||||||||||||    
T  19987330 cgtccctaagaattcggaggatcggctctcagaatgaaaagaggtcagtgataa 19987277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 382
Target Start/End: Complemental strand, 27994819 - 27994775
Alignment:
Q  338 tgcggtacacccagaggtgaaaatgactaccgtatacatgaggaa 382  Q
    |||||||||| || |||||||||| ||||||||||||||||||||    
T  27994819 tgcggtacactcaaaggtgaaaatcactaccgtatacatgaggaa 27994775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 28075960 - 28075906
Alignment:
Q  214 agaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaac 268  Q
    |||||| ||||| |||||||| | |||||||||||| |||||| |||||||||||    
T  28075960 agaatttggaggctcggctctgggaatgaaaagaggccagtgaaaaaatcaaaac 28075906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 146; Significance: 8e-77; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 4506077 - 4505888
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||    
T  4506077 agggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctattt 4505978  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4505977 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacc 4505888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 3155400 - 3155211
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||| |||||||||        ||||||||||||||||||||    
T  3155400 agggccgtccctgagaattcggaggctcggctttaaaaatgaaaagaggtcagtgataaaattaaaacataattttttttaaaagagcaatgttctattt 3155301  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3155300 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacc 3155211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 203 - 390
Target Start/End: Complemental strand, 6965186 - 6965001
Alignment:
Q  203 ggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttat 302  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||  |||        ||||||||||||||||||||||    
T  6965186 ggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaa--taattttttttaaaagagcaatgttctatttat 6965089  T
Q  303 attttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6965088 attttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 6965001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 12337366 - 12337556
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatt 299  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||| ||||         |||||||||||||||||||    
T  12337366 agggccgtccctgagaattcgaaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatataatttttttttaaaagagcaatgttctatt 12337465  T
Q  300 tatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||||||| || | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12337466 tatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 12337556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 8906997 - 8907187
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatt 299  Q
    |||||||| |||||||||||||||| ||||||||  ||||||||||||| ||||||||||||||||||||||         ||||||| |||||||||||    
T  8906997 agggccgttcctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagtaatgttctatt 8907096  T
Q  300 tatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  8907097 tatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacccccacc 8907187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 205 - 390
Target Start/End: Original strand, 29939786 - 29939970
Alignment:
Q  205 ccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatat 304  Q
    ||||||||||||||||| ||| |||||||| | ||| ||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||    
T  29939786 ccgtccctgagaattcgaaggctcggctctgggaataaaaagaggtcagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatttatat 29939884  T
Q  305 tttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||| |||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  29939885 tttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccaccacc 29939970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 26716312 - 26716122
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| ||||||||  || |||||| | | ||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||    
T  26716312 agggccgtccctaagaattcgttggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctattt 26716213  T
Q  301 atatttttt-aaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||| |||||||||||| ||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26716212 atatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 26716122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 3953187 - 3953000
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||| |||||||||||||| ||||| |||||| | ||||||||||||||||||||||||||||||||  ||          ||||| | |||||||||||    
T  3953187 agggtcgtccctgagaatttggaggctcggctttggaaatgaaaagaggtcagtgataaaatcaaaatgtatttttttt--aaagaccgatgttctattt 3953090  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  3953089 atattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgaggaacccccacc 3953000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 203 - 368
Target Start/End: Complemental strand, 34694155 - 34693991
Alignment:
Q  203 ggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttat 302  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||||| | |||||||||||||||| ||         ||||||||||||||||||||||    
T  34694155 ggccgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatttat 34694057  T
Q  303 attttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactacc 368  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  34694056 attttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34693991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 203 - 368
Target Start/End: Complemental strand, 34716567 - 34716403
Alignment:
Q  203 ggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttat 302  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||||| | |||||||||||||||| ||         ||||||||||||||||||||||    
T  34716567 ggccgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatttat 34716469  T
Q  303 attttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactacc 368  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  34716468 attttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34716403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 204 - 358
Target Start/End: Complemental strand, 40636317 - 40636164
Alignment:
Q  204 gccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttata 303  Q
    |||||||||||||||||||||| || ||||| | |||||||||||| |||||||||||||||||||||         |||||||||||||||||||||||    
T  40636317 gccgtccctgagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacata-ttttttttaaaagagcaatgttctatttata 40636219  T
Q  304 ttttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaa 358  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  40636218 ttttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtgaa 40636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 201 - 387
Target Start/End: Complemental strand, 24410622 - 24410434
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnna--aaagagcaatgttctat 298  Q
    |||||||||||| |||||||||||| |||| | | | |||||||||||| |||||||||||||||||| ||            ||| | |||||||||||    
T  24410622 agggccgtccctaagaattcggaggctcggttttgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttttaaaaaacaatgttctat 24410523  T
Q  299 ttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaaccccc 387  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24410522 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccccc 24410434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 27506660 - 27506848
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||||||||| ||||||||   |||||||||||| |||||||||||||||||| ||         |||| ||||||| |||||||    
T  27506660 agggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattttttaaaaaaa-agcaatgatctattt 27506758  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||| ||||||    
T  27506759 atattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgaggaactcccacc 27506848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 203 - 390
Target Start/End: Original strand, 10762488 - 10762673
Alignment:
Q  203 ggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttat 302  Q
    |||||||||| |||||| ||||| || ||||| | |||||||||||| |||||||||||| ||||| |           |||||||||||||||||||||    
T  10762488 ggccgtccctaagaatttggaggctcagctctgggaatgaaaagaggccagtgataaaattaaaacgt--tttttttttaaagagcaatgttctatttat 10762585  T
Q  303 attttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||| ||| ||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10762586 attttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 10762673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 9046212 - 9046023
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||  ||||||||  || || ||||| | ||| |||||||| |||||||||||||||||| ||         |||||| |||||||||||||    
T  9046212 agggccgtcccaaagaattcgttggctcagctctgggaattaaaagaggccagtgataaaatcaaaacgta-ttgtttttaaaagaacaatgttctattt 9046114  T
Q  301 atatttttt-aaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9046113 atatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 9046023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 201 - 386
Target Start/End: Complemental strand, 7162966 - 7162782
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||||||| |||| ||| || ||||  | |||||||||||| |||||||||||| ||||  |          |||||||| |||||||||||    
T  7162966 agggccgtccctgagatttcgaaggctcagctcggggaatgaaaagaggccagtgataaaattaaaatgt-cttttttttaaaagagcgatgttctattt 7162868  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccc 386  Q
    ||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||    
T  7162867 atattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgaggaacccc 7162782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 206 - 358
Target Start/End: Original strand, 5952642 - 5952791
Alignment:
Q  206 cgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 305  Q
    |||||||||||||||||||| |||||||| | |||||||||||| || ||||||||||||||| ||         |||||||||||||| |||||||  |    
T  5952642 cgtccctgagaattcggaggttcggctctcggaatgaaaagaggccaatgataaaatcaaaacgta-ttttttttaaaagagcaatgttatatttat--t 5952738  T
Q  306 ttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaa 358  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5952739 ttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 5952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 281 - 384
Target Start/End: Complemental strand, 16097111 - 16097008
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||  ||||||||| |||||||||| |||||| |||||||||||    
T  16097111 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgagg 16097012  T
Q  381 aacc 384  Q
    ||||    
T  16097011 aacc 16097008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 281 - 382
Target Start/End: Original strand, 24035544 - 24035645
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||| |||||| | |||||||||| ||||||| ||||||||||    
T  24035544 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgagg 24035643  T
Q  381 aa 382  Q
    ||    
T  24035644 aa 24035645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 201 - 313
Target Start/End: Original strand, 1396618 - 1396730
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||| ||| |||||||||||||| ||| |||| |||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||    
T  1396618 agggccttccttgagaattcggaggctcgactctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctattt 1396717  T
Q  301 atattttttaaaa 313  Q
    |||||||||||||    
T  1396718 atattttttaaaa 1396730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 384
Target Start/End: Complemental strand, 38400899 - 38400798
Alignment:
Q  283 aagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaa 382  Q
    |||| |||||||||||||| ||||||||||||||||||||||| || | |||||||||| ||||  || |||||||||| ||||||||||||||||||||    
T  38400899 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaa 38400800  T
Q  383 cc 384  Q
    ||    
T  38400799 cc 38400798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 13800543 - 13800647
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacaccc-agaggtgaaaatgactaccgtatacatgag 379  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| ||||||| | |||||||||| |||||  |||||| |||    
T  13800543 aaaagaacaatgttctatttaaattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaaggtgaaaatcactactatatacacgag 13800642  T
Q  380 gaacc 384  Q
    |||||    
T  13800643 gaacc 13800647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 12134039 - 12134142
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| |   ||||||||||||||||||| | ||||||||||||| |||||||| | |||||||| |||||||||||||| |||    
T  12134039 aaaagaacaatgttctatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattagg 12134138  T
Q  381 aacc 384  Q
    ||||    
T  12134139 aacc 12134142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 21665699 - 21665802
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| ||||||||||||||||||||| | || |||||||||| | |||| | | | |||||||| ||||||||||||||||||    
T  21665699 aaaagaacaatgttctatttaaattttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgagg 21665798  T
Q  381 aacc 384  Q
    ||||    
T  21665799 aacc 21665802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 28425709 - 28425812
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| |  |||||||||||||||||||| || ||||||||||| ||||||||| | |||||||| |||||| |||| ||||||    
T  28425709 aaaagaacaatgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgagg 28425808  T
Q  381 aacc 384  Q
    ||||    
T  28425809 aacc 28425812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 7742132 - 7742236
Alignment:
Q  281 aaaagagcaatgttctatttatatttt-ttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 379  Q
    |||||| |||||||||||||||||||| |||||||||||||||||  || | |||||||||| |||| ||| |||||||||  |||| ||||| ||||||    
T  7742132 aaaagaacaatgttctatttatatttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgag 7742231  T
Q  380 gaacc 384  Q
    |||||    
T  7742232 gaacc 7742236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 384
Target Start/End: Original strand, 16227368 - 16227470
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||| || |||||||||| | |||||| | || ||||||| |||||  ||||||| ||||    
T  16227368 aaagaacaattttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacataagga 16227467  T
Q  382 acc 384  Q
    |||    
T  16227468 acc 16227470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 321
Target Start/End: Complemental strand, 8327796 - 8327681
Alignment:
Q  205 ccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatat 304  Q
    |||||||| | |||||||||| || | ||| ||||||||||||| ||||||||||||||||||| | |        |||| ||||||| |||||||||||    
T  8327796 ccgtccctaaaaattcggaggctcagttctggaaatgaaaagagatcagtgataaaatcaaaacgt-attttttttaaaaaagcaatgatctatttatat 8327698  T
Q  305 tttttaaaagataaata 321  Q
    |||||||||||||||||    
T  8327697 tttttaaaagataaata 8327681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 384
Target Start/End: Original strand, 11912691 - 11912859
Alignment:
Q  216 aattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaaga 315  Q
    |||||||||| ||||||||| || ||||||||  || || ||||||| ||||||||          ||||| |||||||||||||| ||||   |||| |    
T  11912691 aattcggaggctcggctctataagtgaaaagatatccgtaataaaataaaaacatatattttttttaaagaacaatgttctatttaaatttaaaaaaaaa 11912790  T
Q  316 taaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    |||||||||  ||||||||||||||  |||| ||| || ||||||| |||||||||||||| |||||||    
T  11912791 taaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacataaggaacc 11912859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 384
Target Start/End: Complemental strand, 37182739 - 37182670
Alignment:
Q  315 ataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||||||||| || |||||||||||  |||||||| | |||||||| ||||||||||||||||||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacc 37182670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 310 - 378
Target Start/End: Original strand, 22727530 - 22727598
Alignment:
Q  310 aaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatga 378  Q
    ||||||||||||| |  || ||||||||||||||||||||| | |||||||| |||||| |||||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatga 22727598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 16485987 - 16485936
Alignment:
Q  37 tctctatgttagcttattgtgtgtagcaaacacaagatcgctaactcttaac 88  Q
    |||||||||||||||||  |||||| ||||||||||||| ||||||||||||    
T  16485987 tctctatgttagcttatcatgtgtaacaaacacaagatcactaactcttaac 16485936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 361
Target Start/End: Complemental strand, 42029247 - 42029168
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaat 361  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||| || | |||| |||  ||||||| | ||||||||||    
T  42029247 aaagaacaatgttctatttaaattttttaaaagataaatataaggtgtcatatacatgttgtacacctaaaggtgaaaat 42029168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 22727456 - 22727497
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatac 322  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  22727456 aaaagaacaatgttctatttaaattttttaaaagataaatac 22727497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 10252511 - 10252475
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaag 325  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  10252511 aatgttcaatttaaattttttaaaagataaatacaag 10252475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 318
Target Start/End: Original strand, 11952588 - 11952624
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataa 318  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  11952588 aaagaacaatgttctatttaaattttttaaaagataa 11952624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 143; Significance: 5e-75; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 208 - 390
Target Start/End: Original strand, 34756289 - 34756471
Alignment:
Q  208 tccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatttt 307  Q
    |||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||||||    
T  34756289 tccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttt 34756388  T
Q  308 ttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34756389 ttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 34756471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 15480007 - 15480194
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||||| |||||||||||||||||||||          ||||| | |||||||||||    
T  15480007 agggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacatatttttttt--aaagaccgatgttctattt 15480104  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15480105 atattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacc 15480194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 36187796 - 36187984
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||| |          |||||||| |||||||||||    
T  36187796 agggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtt-ttttttttaaaagagcgatgttctattt 36187894  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  36187895 atattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagaaacctccacc 36187984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 27079196 - 27079006
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatt 299  Q
    ||||||||||||||||||||||||| ||||||||   |||||||||||| |||||||||||||||||| ||          |||||||||||||||||||    
T  27079196 agggccgtccctgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctatt 27079097  T
Q  300 tatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||    
T  27079096 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgaggaacccccacc 27079006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 38869280 - 38869468
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||||||||| |||||||| | ||||||||||||||||| ||||||||||||| ||         ||||||||||||||||||||    
T  38869280 agggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggtcagttataaaatcaaaacgta-ttttttttaaaagagcaatgttctattt 38869378  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  38869379 atattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacc 38869468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 203 - 390
Target Start/End: Complemental strand, 30854511 - 30854324
Alignment:
Q  203 ggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttat 302  Q
    |||||||||||| |||| ||||| |||||||| | |||||||| ||||||| |||||||| ||||| ||         ||||||||||||||||||||||    
T  30854511 ggccgtccctgataatttggaggctcggctctgggaatgaaaaaaggtcagcgataaaattaaaacgtatttttttttaaaagagcaatgttctatttat 30854412  T
Q  303 attttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  30854411 attttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgaggaacccccacc 30854324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 204 - 390
Target Start/End: Complemental strand, 19523380 - 19523194
Alignment:
Q  204 gccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttata 303  Q
    |||||||||||||||||||||| |||||||| | |||||||||||  |||||||||||||||||| |           |||||||  |||||||||||||    
T  19523380 gccgtccctgagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtgttttttttttaaagagcggtgttctatttata 19523281  T
Q  304 ttttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19523280 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgaggaacccccacc 19523194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 205 - 390
Target Start/End: Complemental strand, 2275070 - 2274885
Alignment:
Q  205 ccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatat 304  Q
    ||||||||||||||||||||| |||| ||| | |||||||||||| |||||||||||||||||| ||         |||||||| |||||||||||||||    
T  2275070 ccgtccctgagaattcggaggctcggttctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaagagcgatgttctatttatat 2274971  T
Q  305 tttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2274970 tttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgaggaacccccacc 2274885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 16198710 - 16198899
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||| ||||| |||||||||||| |||||||| | |||||||||||| |||||||||||||||||| ||          ||| |||||||||||||||    
T  16198710 agggccttccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaaagcaatgttctattt 16198809  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| || |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  16198810 atattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 16198899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 16591991 - 16592179
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||| |||||||| ||||| ||||||||   |||||||||||| || ||||||||||||||||||         ||||||||||||||||||||    
T  16591991 agggccgtccttgagaatttggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacata-ttttttttaaaagagcaatgttctattt 16592089  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||| ||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16592090 atattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgaggaacccccacc 16592179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 201 - 380
Target Start/End: Original strand, 31194529 - 31194706
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||||| |||||||||| |||||||| | |||||||||||  |||||||||||||||||| ||         ||||||||||||||||||||    
T  31194529 agggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgta-tttcttttaaaagagcaatgttctattt 31194627  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  31194628 atattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgagg 31194706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 28822253 - 28822447
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-----aaaagagcaatgttc 295  Q
    |||||||||||| |||||||||||| |||||| | | ||||||||||||| ||||||||||||||||| ||              |||||||||||||||    
T  28822253 agggccgtccctaagaattcggaggttcggctttgggaatgaaaagaggttagtgataaaatcaaaacgtattttttttttttttaaaagagcaatgttc 28822352  T
Q  296 tatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  28822353 tatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatgaacccccacc 28822447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 209 - 390
Target Start/End: Complemental strand, 9364467 - 9364286
Alignment:
Q  209 ccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttt 308  Q
    |||| |||||||||||| || ||||| | |||||||||||| |||||||||||||||||| ||           || |||||||||||||||||||||||    
T  9364467 ccctaagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttttaaaagcaatgttctatttatattttt 9364368  T
Q  309 taaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9364367 taaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 9364286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 201 - 385
Target Start/End: Original strand, 22986474 - 22986658
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||| |||||||||||||| || |||||   |||||||||||| |||||||||||||||||| |||        |||||||||||||||||||     
T  22986474 agggccgtccgtgagaattcggaggctcagctctgagaatgaaaagaggccagtgataaaatcaaaacgtaattttttttaaaagagcaatgttctatta 22986573  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaaccc 385  Q
    ||||||||||||||| ||||||||  || ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  22986574 atattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagaaaccc 22986658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 201 - 389
Target Start/End: Original strand, 16799241 - 16799431
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaa-tgttctat 298  Q
    |||||||||||| |||||||||||| |||||||| | |||||||||| |||||||||||||||||||| ||          ||||||| || ||||||||    
T  16799241 agggccgtccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaaaacgtattttttttttaaaagagtaaatgttctat 16799340  T
Q  299 ttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccac 389  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  16799341 ttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccac 16799431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 281 - 387
Target Start/End: Original strand, 23284058 - 23284164
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    ||||||||||||||||||||||||||||||||   |||||||||| || ||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  23284058 aaaagagcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgagg 23284157  T
Q  381 aaccccc 387  Q
    |||||||    
T  23284158 aaccccc 23284164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 201 - 383
Target Start/End: Complemental strand, 27924266 - 27924084
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||  || ||||||||| || ||| ||||   |||||||||||| |||||||||||||||||| ||         |||| |||||||  ||||||    
T  27924266 agggccgtttctaagaattcgggggctcgactctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaagcaatgacctattt 27924167  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaac 383  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  27924166 atattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgaggaac 27924084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 201 - 380
Target Start/End: Original strand, 31881349 - 31881528
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatt 299  Q
    |||||||||||||| ||||  |||| |||||||| | ||||||||| ||||||| ||||||||||||| |           |||||||||||||||||||    
T  31881349 agggccgtccctgaaaatttagaggctcggctctgggaatgaaaagtggtcagtaataaaatcaaaacgttttttttttttaaaagagcaatgttctatt 31881448  T
Q  300 tatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||| |||||| ||||||| ||||||||||||||||||    
T  31881449 tatattttttaaaagataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtatacatgagg 31881528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 286 - 390
Target Start/End: Original strand, 40389537 - 40389641
Alignment:
Q  286 agcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaaccc 385  Q
    |||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||| ||| |||||||||||||||||||||  |||||||||||    
T  40389537 agcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgaggaaccc 40389636  T
Q  386 ccacc 390  Q
    |||||    
T  40389637 ccacc 40389641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 214 - 363
Target Start/End: Complemental strand, 7338170 - 7338021
Alignment:
Q  214 agaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 313  Q
    |||||| ||||| |||||||||| |||||||||||||||  |||||||||||||| |           ||||||||||||||||||||||||||||||||    
T  7338170 agaatttggaggctcggctctaggaatgaaaagaggtcaaggataaaatcaaaacgttttttttttttaaagagcaatgttctatttatattttttaaaa 7338071  T
Q  314 gataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatga 363  Q
    |||||||||||| || ||||||||||||||||||| | ||||||||||||    
T  7338070 gataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaatga 7338021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 7671117 - 7670919
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn--------aaaagagcaatg 292  Q
    |||||||||| | |||||||||||| |||||||| | |||||||||||| |||||||||||||||||| ||                 |||| |||||||    
T  7671117 agggccgtccttaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttttaaaaaaaaaaagcaatg 7671018  T
Q  293 ttctatttatatttttt-aaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||| |||||||||||| ||| |||||||||| | ||||||||||| ||||||||||||||||||||||||||||| | |||||||    
T  7671017 ttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgaggtatccccacc 7670919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 281 - 382
Target Start/End: Original strand, 36868872 - 36868973
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| ||||||||||||||  |||||||||||||||||||||| || |||||||||| |||||||||| | |||||||| ||||||||||||||||||    
T  36868872 aaaagaacaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgagg 36868971  T
Q  381 aa 382  Q
    ||    
T  36868972 aa 36868973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 1366522 - 1366625
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| |||||||| |||||||||||||||||  ||||||||||| |||||| | | |||||||| ||||||||||| ||||||    
T  1366522 aaaagaacaatgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgagg 1366621  T
Q  381 aacc 384  Q
    ||||    
T  1366622 aacc 1366625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 281 - 384
Target Start/End: Complemental strand, 33037884 - 33037781
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||||  ||||||||||  ||||||||| |||||||||  | ||||||||||||||||    
T  33037884 aaaagaacaatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgagg 33037785  T
Q  381 aacc 384  Q
    ||||    
T  33037784 aacc 33037781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 282 - 384
Target Start/End: Original strand, 14318382 - 14318484
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||| | |||| ||| |  ||||||| |||||||||||||||||||    
T  14318382 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgagga 14318481  T
Q  382 acc 384  Q
    |||    
T  14318482 acc 14318484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 281 - 381
Target Start/End: Original strand, 2024638 - 2024738
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||  ||||||||||||| | |||||||| || ||||||| |||||| |||||||||||    
T  2024638 aaaagaacaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatatacatgagg 2024737  T
Q  381 a 381  Q
    |    
T  2024738 a 2024738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 289 - 384
Target Start/End: Original strand, 2530901 - 2530996
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    |||||||||||||  |||||||||||||||||||||  || ||||||||| ||||||| ||| |||||||||| ||||| ||||||||||||||||    
T  2530901 aatgttctatttaagttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacc 2530996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 384
Target Start/End: Complemental strand, 34426007 - 34425904
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||  ||||||||||||||||||||||| ||||||||||||| | |||||| | || | ||||| | ||||||||||||||||    
T  34426007 aaaagaacaatgttctatttcaattttttaaaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgagg 34425908  T
Q  381 aacc 384  Q
    ||||    
T  34425907 aacc 34425904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 381
Target Start/End: Original strand, 26718953 - 26719045
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    ||||||||||||| | ||||||||||||||||||||  || |||||||||||| ||||| || |||||||||| ||||||| |||||||||||    
T  26718953 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26719045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 381
Target Start/End: Original strand, 26988697 - 26988789
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    ||||||||||||| | ||||||||||||||||||||  || |||||||||||| ||||| || |||||||||| ||||||| |||||||||||    
T  26988697 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26988789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 11242314 - 11242417
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| ||||||||||||||  ||||||||||||||||||||| |||  ||||||||| | |||| ||| || || |||| ||||||||||||||||||    
T  11242314 aaaagaacaatgttctatttaatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgagg 11242413  T
Q  381 aacc 384  Q
    ||||    
T  11242414 aacc 11242417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 384
Target Start/End: Complemental strand, 2412191 - 2412089
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||  || |||||||||||| | || ||| | |||||||| ||||| |||||||||||||    
T  2412191 aaagaacaatgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgagga 2412092  T
Q  382 acc 384  Q
    |||    
T  2412091 acc 2412089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 383
Target Start/End: Complemental strand, 24395835 - 24395741
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaac 383  Q
    ||||||||||||| ||||||||||||||||||||||| ||  |||||||| |  |||| ||| |||||||||| || |||||||| |||||||||    
T  24395835 aatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgaggaac 24395741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 281 - 382
Target Start/End: Complemental strand, 10407565 - 10407464
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||| || |||| |||||  ||||| | | | |||||||| |||||||||| |||||||    
T  10407565 aaaagaacaatgttctatttaaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgagg 10407466  T
Q  381 aa 382  Q
    ||    
T  10407465 aa 10407464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 289 - 376
Target Start/End: Complemental strand, 10543769 - 10543682
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacat 376  Q
    ||||||| | ||| ||||||||||||||||||| ||| ||  ||||||||||| |||| ||| |||||||||| ||||||||||||||    
T  10543769 aatgttccacttaaattttttaaaagataaatataaggtgatgtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat 10543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 40794323 - 40794426
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| ||||||| |||||| ||||||||||||| ||||||||   |||||| ||||  | |||||| | |||||||||| |||||||||||||||||     
T  40794323 aaaagaacaatgttttatttaaattttttaaaagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgaga 40794422  T
Q  381 aacc 384  Q
    ||||    
T  40794423 aacc 40794426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 373
Target Start/End: Original strand, 22648734 - 22648824
Alignment:
Q  283 aagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtata 373  Q
    |||| |||||||||||||| ||||||||||||||||||||||  || |||||||||| || ||| ||| |||||| ||| ||||| |||||    
T  22648734 aagaacaatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtgacaatcactactgtata 22648824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 384
Target Start/End: Original strand, 41911614 - 41911716
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    ||||| |||||||| | |||  |||||||||||| ||||||||| || |||||||| |||||||||||| | || ||||| |||| |||||| |||||||    
T  41911614 aaagaacaatgttcaacttaatttttttaaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgagga 41911713  T
Q  382 acc 384  Q
    |||    
T  41911714 acc 41911716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 372
Target Start/End: Complemental strand, 17345053 - 17344969
Alignment:
Q  288 caatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtat 372  Q
    |||||||||||||| |||||||| |  |||||||||||||| | | ||||||||||||||||| || | ||||| ||||||||||    
T  17345053 caatgttctatttaaattttttatataataaatacaagatgtcatgtatatgcggtacacccaaagataaaaattactaccgtat 17344969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 23283944 - 23284011
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaac 268  Q
    |||||||||||||||||||| |||| || | | ||| |||||||||||| ||||||||||||||||||    
T  23283944 agggccgtccctgagaattcagaggctcagttttaggaatgaaaagaggccagtgataaaatcaaaac 23284011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 40389461 - 40389518
Alignment:
Q  208 tccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaa 265  Q
    ||||| |||||||||||| |||||||| | |||||||||| |||||||||||||||||    
T  40389461 tccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaa 40389518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 606258 - 606214
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaag 325  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  606258 aaaagaacaatgttctatttaaattttttaaaagataaatacaag 606214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 304 - 384
Target Start/End: Complemental strand, 15639724 - 15639644
Alignment:
Q  304 ttttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    |||||| ||||||||||||||| || |||||||||||| |||| ||| || ||||||| |||  ||||||||| |||||||    
T  15639724 tttttttaaagataaatacaaggtgacgtatatatgcgatacatccaaagatgaaaatcactgtcgtatacataaggaacc 15639644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 27530587 - 27530543
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaag 325  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  27530587 aaaagaacaatgttctatttaaattttttaaaagattaatacaag 27530543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 324
Target Start/End: Complemental strand, 22875039 - 22875003
Alignment:
Q  288 caatgttctatttatattttttaaaagataaatacaa 324  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  22875039 caatattctatttaaattttttaaaagataaatacaa 22875003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 35080766 - 35080806
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaata 321  Q
    |||||| ||||||| |||||| |||||||||||||||||||    
T  35080766 aaaagaacaatgttttatttaaattttttaaaagataaata 35080806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 2e-74; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 18776684 - 18776873
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||    
T  18776684 agggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaatataattttttttaaaagagcaatgttctattt 18776783  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  18776784 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaaacccccacc 18776873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 29077403 - 29077215
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||    
T  29077403 agggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctattt 29077305  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29077304 atattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgaggaacccccacc 29077215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 203 - 390
Target Start/End: Original strand, 8171460 - 8171646
Alignment:
Q  203 ggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttat 302  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||| | ||         ||||||||||||||||||||||    
T  8171460 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaagcgta-ttttttttaaaagagcaatgttctatttat 8171558  T
Q  303 attttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8171559 attttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacc 8171646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 12596208 - 12596394
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||||| |||||||||||||||||| |           ||||||| |||||||||||    
T  12596208 agggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgt---ttttttttaaagagcgatgttctattt 12596304  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12596305 atatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacc 12596394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 20091198 - 20091388
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagag-caatgttctatt 299  Q
    |||||||||||| |||||||||||| ||||||||   |||||||||||| |||||||||||||||||| ||         |||| |  ||||| ||||||    
T  20091198 agggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaaacaatgatctatt 20091297  T
Q  300 tatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20091298 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 20091388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 201 - 363
Target Start/End: Complemental strand, 26254177 - 26254015
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||| ||||||||||||||||||| |||||| | | ||||||||||||||||||||||||||||||||||         ||||||||||||||||||||    
T  26254177 agggctgtccctgagaattcggaggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacatatttttttttaaaagagcaatgttctattt 26254078  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatga 363  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||    
T  26254077 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaatga 26254015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 201 - 389
Target Start/End: Original strand, 10329328 - 10329516
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||| ||| |||||||||||| |||||||| | |||||||||||| |||||||||||||||||| ||         |||| |||||||||||||||    
T  10329328 agggccgttcctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaagcaatgttctattt 10329427  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccac 389  Q
    ||||||||||||||||||||| ||| ||||||||||||| || | ||||| |||||||||||||||||||||||||||| |||||||||    
T  10329428 atattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaacccccac 10329516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 23550989 - 23551178
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||| ||||||| |||||||||||| ||||||||   |||||||||||| |||||||||||||||||||||         |||| ||||||| |||||||    
T  23550989 agggtcgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacatatttttttaaaaaa-agcaatgatctattt 23551087  T
Q  301 atatttt-ttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||| |||||||||||||| ||| || ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  23551088 atatttttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 23551178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 281 - 390
Target Start/End: Complemental strand, 10955588 - 10955479
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10955588 aaaagagcgatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgagg 10955489  T
Q  381 aacccccacc 390  Q
    ||||||||||    
T  10955488 aacccccacc 10955479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 385
Target Start/End: Complemental strand, 19692278 - 19692094
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||| ||||| |||||||||| | |||||||| ||||||||||| |  |||||||||||||||||| ||         ||||||||||||||||||||    
T  19692278 agggccctccctaagaattcggaagctcggctctggaaatgaaaagtgtccagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctattt 19692179  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaaccc 385  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||||| | ||||||||||||||  ||||||||||||||||||    
T  19692178 atattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgaggaaccc 19692094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 38414794 - 38414983
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||| ||||||| |||||||||||| ||| |||| |||||||||||||   ||| ||||||||||||| ||         |||||||||| |||||||||    
T  38414794 agggtcgtccctaagaattcggaggctcgactctggaaatgaaaagagactagtcataaaatcaaaacgtatttttttgcaaaagagcaacgttctattt 38414893  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
     |||||||||||||||||||| ||| || |||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  38414894 gtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccacc 38414983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 201 - 380
Target Start/End: Complemental strand, 28749894 - 28749715
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatt 299  Q
    |||||||||||||| |||||||||| |||||||| | |||||||||||  || ||||||||||||||||||          ||||||||||| |||||||    
T  28749894 agggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccaatgataaaatcaaaacatatttttttttcaaaagagcaatattctatt 28749795  T
Q  300 tatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||||    
T  28749794 tatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgagg 28749715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 47984886 - 47985077
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatt 299  Q
    |||||||||||| ||||||||  || |||||||| | |||||||||| | |||||||||||||||||| |           |||| ||||||||||||||    
T  47984886 agggccgtccctaagaattcgttggctcggctctgggaatgaaaagatgccagtgataaaatcaaaacgtgttttttttttaaaaaagcaatgttctatt 47984985  T
Q  300 tatatttt-ttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||| |||||||| ||||| ||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  47984986 tatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgaggaacccccacc 47985077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 288 - 390
Target Start/End: Original strand, 24525690 - 24525792
Alignment:
Q  288 caatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaaccccc 387  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  24525690 caatgttctatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaaccccc 24525789  T
Q  388 acc 390  Q
    |||    
T  24525790 acc 24525792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 48983757 - 48983951
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-----aaaagagcaatgttc 295  Q
    |||||||||||| |||||||||||| ||||||||   |||||||||||| || ||||||||||||||| ||              |||| | ||||| ||    
T  48983757 agggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacgtatttttttttttttaaaaaaaacaatgatc 48983856  T
Q  296 tatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  48983857 tatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgaggaacccccacc 48983951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 202 - 386
Target Start/End: Complemental strand, 8239869 - 8239686
Alignment:
Q  202 gggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattta 301  Q
    ||||||||||| |||||| ||||| |||||||| |||||||||||||| || ||||||||| ||||| ||         ||||||| |||||||||||||    
T  8239869 gggccgtccctaagaatttggaggctcggctctggaaatgaaaagaggccaatgataaaatgaaaacgta-ttttttttaaaagagtaatgttctattta 8239771  T
Q  302 tattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccc 386  Q
    |||||||||||| ||||||| ||  ||||||||||||| |||||||||| | |||||||||| ||||||||| ||||||||||||    
T  8239770 tattttttaaaaaataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaacccc 8239686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 25010610 - 25010428
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacata-annnnnnnnaaaagagcaatgttctatt 299  Q
    |||||||||||| |||||||||||| |||||||| |||||||||||||| |||||||||||||||||| ||          |||| ||||||| ||||||    
T  25010610 agggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacgtattttttaaaaaaaaaagcaatgatctatt 25010511  T
Q  300 tata--ttttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||  |||||||||||||||||| ||| ||          |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25010510 tatattttttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 25010428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 282 - 381
Target Start/End: Original strand, 9021799 - 9021898
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    ||||| |||| | ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  9021799 aaagaacaatttgctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgagga 9021898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 201 - 362
Target Start/End: Original strand, 33162257 - 33162418
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||| | ||| |||||||||||  |||| ||| | | ||||||||||||| ||||||||| ||||| ||          ||||||||||| |||||||    
T  33162257 agggccattcctaagaattcggagattcggttctgggagtgaaaagaggtcaatgataaaattaaaacgtattttttttttaaagagcaatgctctattt 33162356  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatg 362  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||    
T  33162357 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatg 33162418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 2611260 - 2611363
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||| ||  ||||||||| || || ||||||||||||    
T  2611260 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgagg 2611359  T
Q  381 aacc 384  Q
    ||||    
T  2611360 aacc 2611363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 289 - 381
Target Start/End: Complemental strand, 23859169 - 23859077
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    ||||||||||||| ||||||||||||||||||||||  | ||||||||||||| |||||||| || ||||||| |||||||||||||||||||    
T  23859169 aatgttctatttaaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgagga 23859077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 281 - 384
Target Start/End: Complemental strand, 7398555 - 7398452
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||| |||| |||||||| | |||||| | |||||||||| |||||| |||||||||||    
T  7398555 aaaagaacaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgagg 7398456  T
Q  381 aacc 384  Q
    ||||    
T  7398455 aacc 7398452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 282 - 373
Target Start/End: Original strand, 6765680 - 6765771
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtata 373  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| || |||||||| || ||||| ||| |||||||||| |||||||||||    
T  6765680 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtata 6765771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 289 - 384
Target Start/End: Complemental strand, 36891674 - 36891579
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    |||||||||||||||||||||||| ||| |||||||  ||  |||||||| ||||||| ||| |||||||||| ||||||||||||||||||||||    
T  36891674 aatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacc 36891579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 381
Target Start/End: Original strand, 36902924 - 36903022
Alignment:
Q  283 aagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||| ||||||||||  ||||||| | |||||||||| | ||| |||||||||||||    
T  36902924 aagaacaatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatgagga 36903022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 281 - 373
Target Start/End: Complemental strand, 23744900 - 23744808
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtata 373  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||| ||||| |||||||||||||||| | || | ||||| |||||||||||    
T  23744900 aaaagaacaatgttctaattaaattttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 384
Target Start/End: Complemental strand, 12981422 - 12981327
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    |||||||||||||  |||||||||||||||||||||| | || |||||| ||||||||| || |||||||||| ||||| ||||| ||||||||||    
T  12981422 aatgttctatttaatttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgaggaacc 12981327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 27237421 - 27237524
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||  ||||||||| | |  | | | |||||||||| |||| |||||||||||||    
T  27237421 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgagg 27237520  T
Q  381 aacc 384  Q
    ||||    
T  27237521 aacc 27237524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 40357303 - 40357365
Alignment:
Q  206 cgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaac 268  Q
    ||||| |||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  40357303 cgtccttgagaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaac 40357365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 384
Target Start/End: Complemental strand, 18201234 - 18201138
Alignment:
Q  288 caatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||| |||||||| ||||||||||| |||||||||||||||| |||||||| |||||||| |  |||||||||   |||| || ||||||||||||    
T  18201234 caatgatctatttaaattttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatgaggaacc 18201138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 289 - 380
Target Start/End: Complemental strand, 20153297 - 20153206
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||| ||||||||||||||||||||||  ||  ||||||||||| || ||||| || ||||||| ||| ||||||||||||||    
T  20153297 aatgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgagg 20153206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 136
Target Start/End: Original strand, 20528464 - 20528575
Alignment:
Q  25 tacacaaaagcgtctctatgttagcttattgtgtgtagcaaacacaagatcgctaactcttaaccatctaatgaatacttgttgcacaaataatcattct 124  Q
    |||| |||||| ||| |||||||||||||   ||||| | ||||  ||||| |||||||||||  ||||||||| ||||| || ||||| ||||||||||    
T  20528464 tacataaaagcatctttatgttagcttatcacgtgtaaccaacatgagatcactaactcttaattatctaatgattacttattacacaagtaatcattct 20528563  T
Q  125 ctaactaactac 136  Q
    ||||||||||||    
T  20528564 ctaactaactac 20528575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 12419493 - 12419596
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| ||||||||||||||||||||||  | || ||||| || | |||| ||| || ||||||| ||||  | ||||||||||    
T  12419493 aaaagaacaatgttctatttaaattttttaaaagataaatacaatgtaccttatatgtgtgatacatccaaagatgaaaatcactattgaatacatgagg 12419592  T
Q  381 aacc 384  Q
    ||||    
T  12419593 aacc 12419596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 24525600 - 24525667
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaac 268  Q
    |||| ||||||| |||||||||||| |||||||| | |||||||||||| | ||||||||||||||||    
T  24525600 agggtcgtccctaagaattcggaggctcggctctgggaatgaaaagaggcctgtgataaaatcaaaac 24525667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 368
Target Start/End: Original strand, 21763586 - 21763672
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactacc 368  Q
    ||||| || ||||||||||| ||||||||||||||||||||||  |  |||||||||||| |||||| | | |||||||| ||||||    
T  21763586 aaagaacattgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaatcactacc 21763672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 297 - 383
Target Start/End: Original strand, 23020498 - 23020583
Alignment:
Q  297 atttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaac 383  Q
    ||||| ||||||||||||||||||| ||| ||  ||||||||||   |||| || |||||||||| |||||||||||||||||||||    
T  23020498 atttagattttttaaaagataaatataaggtgttgtatatatgcac-acactcaaaggtgaaaatcactaccgtatacatgaggaac 23020583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 383
Target Start/End: Complemental strand, 38971333 - 38971255
Alignment:
Q  305 tttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaac 383  Q
    ||||||||||||||||||||| || ||||||||||   |||||| | | |||||||| ||||||||| ||| |||||||    
T  38971333 tttttaaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgtaaacacgaggaac 38971255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 40357413 - 40357453
Alignment:
Q  330 cgtatatatgcggtacacccagaggtgaaaatgactaccgt 370  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  40357413 cgtatatatgcggtacaccaagagatgaaaatgactaccgt 40357453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 324
Target Start/End: Original strand, 9014177 - 9014219
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaa 324  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||    
T  9014177 aaagaacaatgttttatttaaattttttaaaagataaatacaa 9014219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 10955670 - 10955605
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaa 266  Q
    ||||| |||| |||||||||||||| || ||||  | |||||| ||||||||||||| ||||||||    
T  10955670 agggctgtccatgagaattcggaggctcagctcggggaatgaatagaggtcagtgattaaatcaaa 10955605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 5e-69; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 2952138 - 2952329
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn--aaaagagcaatgttctat 298  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||          ||||||||||||||||||    
T  2952138 agggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaaagagcaatgttctat 2952237  T
Q  299 ttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2952238 ttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacc 2952329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 203 - 390
Target Start/End: Complemental strand, 30883512 - 30883324
Alignment:
Q  203 ggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctattta 301  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||| ||||||||||||||||||||||         |||||||||||||||||||||    
T  30883512 ggccgtccctgagaattcagaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagcaatgttctattta 30883413  T
Q  302 tattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30883412 tattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 30883324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 203 - 390
Target Start/End: Original strand, 13534609 - 13534794
Alignment:
Q  203 ggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttat 302  Q
    |||||||||||| |||||||||| |||||||| | |||||||||||| |||||||||||||||||| ||         ||||||||||||||||||||||    
T  13534609 ggccgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatttat 13534707  T
Q  303 attttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13534708 attttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 13534794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 203 - 390
Target Start/End: Original strand, 13624149 - 13624334
Alignment:
Q  203 ggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttat 302  Q
    |||||||||||| |||||||||| |||||||| | |||||||||||| |||||||||||||||||| ||         ||||||||||||||||||||||    
T  13624149 ggccgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatttat 13624247  T
Q  303 attttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13624248 attttttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 13624334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 3048436 - 3048625
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||| ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||        ||||||||||| | ||||||    
T  3048436 agggccgtctctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatatactattt 3048535  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||| ||||    
T  3048536 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaaccctcacc 3048625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 45476000 - 45475812
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||| |||||||||||||||||| |||||||  | |||||||||||| |||||||||||||||||| ||         ||||||||||||||||||||    
T  45476000 agggccatccctgagaattcggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctattt 45475902  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45475901 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacc 45475812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 23606549 - 23606737
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||||||||| |||||||| | |||||||||||  |||||||||||||||||| ||         ||||||||||||||||||||    
T  23606549 agggccgtccctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctattt 23606647  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  23606648 atattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccacc 23606737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 23798180 - 23798369
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||||||||| |||||||| | || |||||||||||| ||||||||||||||| ||          |||||||||||||||||||    
T  23798180 agggccgtccctaagaattcggaggctcggctctgggaacgaaaagaggtcaatgataaaatcaaaacgtatattttttttaaagagcaatgttctattt 23798279  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  23798280 atattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacc 23798369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 42600966 - 42600777
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||||||| |          |||| ||||||| |||||||    
T  42600966 agggccgtccctaagaattcggaggctcggctctgaaaatgaaaagaggtcagtgataaaatcaaaacgtttttttttttaaaaaagcaatgatctattt 42600867  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42600866 atattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 42600777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 201 - 385
Target Start/End: Original strand, 37430077 - 37430261
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||||| |||||||||||||||||| |          |||||||| |||||||||||    
T  37430077 agggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtttttttttttaaaagagcgatgttctattt 37430176  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaaccc 385  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||    
T  37430177 atattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgaggaaccc 37430261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 211 - 386
Target Start/End: Original strand, 5860671 - 5860848
Alignment:
Q  211 ctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnna--aaagagcaatgttctatttatattttt 308  Q
    ||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||||           |||||||||||||||||||||||||||    
T  5860671 ctgagaatttggaggctcggctctggaaatgaaaagaggtcaatgataaaatcaaaacataatatttatttttaaagagcaatgttctatttatattttt 5860770  T
Q  309 taaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccc 386  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  5860771 taaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaaacccc 5860848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 41879363 - 41879176
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||| ||| |||||||| | ||||||||||||| ||||||||||| ||||| ||         |||||| |||||||||||||    
T  41879363 agggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggttagtgataaaattaaaacgta--tttttttaaaagaacaatgttctattt 41879266  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| | |||||||||||||||||| ||| |||||||||||||||||| ||||||||| ||||||||||    
T  41879265 atattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgagaaacccccacc 41879176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 10917574 - 10917386
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||| |||| | |||||||||||| ||||||||   |||||||||||| |||||||||||||||||| ||         |||| | ||||| |||||||    
T  10917574 agggctgtccttaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaa-caatgatctattt 10917476  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  10917475 atattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgaggaacccccacc 10917386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 7944521 - 7944624
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| ||||||| |||||| ||||||||||| ||||||||||| |||||||||||||  ||||||||| |||||||||| ||||||||||||||||||    
T  7944521 aaaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagg 7944620  T
Q  381 aacc 384  Q
    ||||    
T  7944621 aacc 7944624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 304 - 384
Target Start/End: Complemental strand, 5942777 - 5942697
Alignment:
Q  304 ttttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  5942777 ttttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacc 5942697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 289 - 384
Target Start/End: Complemental strand, 8103008 - 8102913
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    |||||| |||||| ||||||||||||||||||||||| ||| |||||||||||||||||| | |||||||||| | ||||||||||||||||||||    
T  8103008 aatgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacc 8102913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 41677172 - 41677276
Alignment:
Q  281 aaaagagcaatgttctatttatatttt-ttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 379  Q
    |||||| |||||||||||||| ||||| ||||||||||||||||||||| |||||||||||| |||| | | |||||||||| ||||| |||||||||||    
T  41677172 aaaagaacaatgttctatttaaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgag 41677271  T
Q  380 gaacc 384  Q
    |||||    
T  41677272 gaacc 41677276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 5973106 - 5973209
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| || ||||||||||  ||||||||| || ||||||| | ||||||||||| ||||    
T  5973106 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtatacacgagg 5973205  T
Q  381 aacc 384  Q
    ||||    
T  5973206 aacc 5973209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 281 - 384
Target Start/End: Complemental strand, 11290288 - 11290185
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| ||||||| |||||| ||||||||||||||||||||||| || ||||||||||  |||||| || |||||||||| |||||||||||||||||     
T  11290288 aaaagaacaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagc 11290189  T
Q  381 aacc 384  Q
    ||||    
T  11290188 aacc 11290185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 281 - 379
Target Start/End: Original strand, 34789861 - 34789959
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 379  Q
    |||||| | |||||||||||| || | ||||||||||||||||||||| ||||||||||  ||||||||| |||||||||| |||||||||||||||||    
T  34789861 aaaagaacgatgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgag 34789959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 282 - 384
Target Start/End: Original strand, 39332405 - 39332507
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    ||||| ||||||||||||||  ||||| |||||||||||||||| || | |||||| |||||||| ||| |||||||||| |||||||||||||||||||    
T  39332405 aaagaacaatgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgagga 39332504  T
Q  382 acc 384  Q
    |||    
T  39332505 acc 39332507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 15167414 - 15167517
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||  ||  ||||||||||| |||||||| | |||||||| |||| |||||||||||||    
T  15167414 aaaagaacaatgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 15167513  T
Q  381 aacc 384  Q
    ||||    
T  15167514 aacc 15167517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 384
Target Start/End: Complemental strand, 5721654 - 5721560
Alignment:
Q  290 atgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||||||||||  |||||||||||||||||||||| |||| ||||||  ||||||||||| | |||||||| |||||||||||| |||||||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacc 5721560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 384
Target Start/End: Complemental strand, 15078854 - 15078759
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||||||||||| | ||||||||||||||||| ||| ||| ||||||||||  |||||||| | |||||||| |||| |||||||||||||||||    
T  15078854 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 15078759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 281 - 376
Target Start/End: Complemental strand, 8646309 - 8646215
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacat 376  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |  |||||||||||  ||||| || | |||||||| ||||||||||||||    
T  8646309 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtatcgtatatatgc-atacacgcaaatgtgaaaatcactaccgtatacat 8646215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 289 - 384
Target Start/End: Original strand, 25561502 - 25561595
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||||||||||| || ||||||| |||||||||||| ||||||||||||||| || ||||| | |||||||| ||| ||||||||||||||||||    
T  25561502 aatgttctatttaaatcttttaaa-gataaatacaaggtgccgtatatatgcgata-acccaaatgtgaaaatcactgccgtatacatgaggaacc 25561595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 20003729 - 20003796
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaac 268  Q
    ||||||||||||||||||| ||||| |||||||  | |||||||||||| ||||||||||||||||||    
T  20003729 agggccgtccctgagaatttggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaac 20003796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 282 - 361
Target Start/End: Original strand, 30674403 - 30674482
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaat 361  Q
    ||||| |||||||||||||| || |||||||||||||||| ||| || |||||||||||| ||||| || ||||||||||    
T  30674403 aaagaacaatgttctatttaaatgttttaaaagataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaat 30674482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 384
Target Start/End: Original strand, 14509983 - 14510084
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtg-aaaatgactaccgtatacatgagg 380  Q
    ||||| |||||||| ||||| ||||||||||||| ||||| ||| || ||||||||  ||||||||||| | ||| ||||| |||||||||||||||||     
T  14509983 aaagaacaatgttcaatttaaattttttaaaagacaaatataaggtgtcgtatata--cggtacacccaaatgtgaaaaatcactaccgtatacatgagt 14510080  T
Q  381 aacc 384  Q
    ||||    
T  14510081 aacc 14510084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 361
Target Start/End: Original strand, 23941097 - 23941170
Alignment:
Q  288 caatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaat 361  Q
    ||||||| |||||| ||||||||||||||||||||||| || | |||||| ||| |||||||| || |||||||    
T  23941097 caatgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacccaaagatgaaaat 23941170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 325
Target Start/End: Complemental strand, 9108596 - 9108553
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaag 325  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  9108596 aaagaacaatgttctatttaaattttttaaaagataaatacaag 9108553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 381
Target Start/End: Original strand, 34048705 - 34048806
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgc--ggtacacccagaggtgaaaatgactaccgtatacatgag 379  Q
    ||||| |||||||||||||| |  |||||||||||||||||||  || |||||||||    | |||||||| || ||||||| ||||| |||||||||||    
T  34048705 aaagaacaatgttctatttaaacattttaaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatgag 34048804  T
Q  380 ga 381  Q
    ||    
T  34048805 ga 34048806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 34868184 - 34868220
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaag 325  Q
    ||||||||||||| |||||||||||||||||||||||    
T  34868184 aatgttctatttaaattttttaaaagataaatacaag 34868220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 348
Target Start/End: Complemental strand, 5757153 - 5757117
Alignment:
Q  312 aagataaatacaagatgccgtatatatgcggtacacc 348  Q
    |||||||||||||| |||||||||||||||| |||||    
T  5757153 aagataaatacaaggtgccgtatatatgcggaacacc 5757117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 38009151 - 38009191
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaata 321  Q
    |||||| |||||||||||||| | |||||||||||||||||    
T  38009151 aaaagaacaatgttctatttaaaatttttaaaagataaata 38009191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 133; Significance: 5e-69; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 44655935 - 44655747
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||        ||||||||||||||||||||    
T  44655935 agggccgtccctgagaattcggaggctcggctctggaaatgaaaagagaccagtgataaaatcaaaacataattttttt-aaaagagcaatgttctattt 44655837  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44655836 atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacc 44655747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 5316874 - 5316686
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||| ||||| ||| |  ||| ||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||    
T  5316874 agggccgtccctgagaatttggaggctcgaccttaggaatgaaaagaggtcagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctattt 5316776  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5316775 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 5316686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 14146494 - 14146306
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||||| |||||||||||||||||| ||         |||||||| |||||||||||    
T  14146494 agggccgtccctgagaattcggaggctcggctcttggaatgaaaagaggccagtgataaaatcaaaacgta-ttttttttaaaagagcgatgttctattt 14146396  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14146395 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacc 14146306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 23185621 - 23185433
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||| |||||||||||||||| ||||||| || | |||||||||| |||||||||||||||||| ||         ||||||||||||||||||||    
T  23185621 agggccgttcctgagaattcggaggctcggctcgaggattgaaaagaggccagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctattt 23185523  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23185522 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacc 23185433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 5027745 - 5027555
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatt 299  Q
    ||||||||||||||||||||||||| ||| |||  | |||||||||||| |||||||||||||||||| ||          |||||||||||||||||||    
T  5027745 agggccgtccctgagaattcggaggctcgactcggggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctatt 5027646  T
Q  300 tatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||    
T  5027645 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgaggaacccccacc 5027555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 201 - 386
Target Start/End: Complemental strand, 17169150 - 17168966
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||         |||| |||||||||||||||    
T  17169150 agggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaa-agcaatgttctattt 17169052  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccc 386  Q
    ||||||||||||||||||||| ||| ||  |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  17169051 atattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgaggaacccc 17168966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 6771988 - 6771797
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnna--aaagagcaatgttctat 298  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||||| |||||||||||||||||| |             ||||||| |||||||||    
T  6771988 agggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtgttttttttttttaaagagcgatgttctat 6771889  T
Q  299 ttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  6771888 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgaggaacctccacc 6771797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 203 - 390
Target Start/End: Complemental strand, 50881621 - 50881436
Alignment:
Q  203 ggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttat 302  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| ||||  ||         ||||||||||||||||||||||    
T  50881621 ggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaattaaaatcta--tttttttaaaagagcaatgttctatttat 50881524  T
Q  303 attttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||| || ||||||||||||||||| | |||||||||||||||||| |||||||||||||||| |||||    
T  50881523 attttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgaggaacctccacc 50881436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 3406613 - 3406424
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||| ||||||||||||| ||||| || ||||  | ||||||||||||||||||||||||| ||||| |          |||||||| |||||||||||    
T  3406613 agggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgtttttttttttaaaagagcgatgttctattt 3406514  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||    
T  3406513 atattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacc 3406424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 3440207 - 3440396
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||| ||||||||||||| ||||| || ||||  | ||||||||||||||||||||||||| ||||| |          |||||||| |||||||||||    
T  3440207 agggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgtttttttttttaaaagagcgatgttctattt 3440306  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||    
T  3440307 atattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacc 3440396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 4971537 - 4971725
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||| |||||||||||||| |||| |||| ||  | |||||||||||  |||||||||||||||||||||         ||| ||||||||||||||||    
T  4971537 agggctgtccctgagaattctgaggctcggttcggggaatgaaaagagaccagtgataaaatcaaaacatatttttttttaaa-gagcaatgttctattt 4971635  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  4971636 atattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgaggaacccccacc 4971725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 206 - 390
Target Start/End: Complemental strand, 16140244 - 16140061
Alignment:
Q  206 cgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 305  Q
    |||||||||||||||||||| |||||||| | |||||||||||| | |||||||||||||||| ||         |||||||  ||||||||||||||||    
T  16140244 cgtccctgagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgta-ttttttttaaaagagtgatgttctatttatatt 16140146  T
Q  306 ttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  16140145 ttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaatccccacc 16140061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 27906647 - 27906824
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||||||||||||||||        ||||||||||||||| ||||    
T  27906647 agggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttccattt 27906746  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| |||||             ||||||||||||||||||||||||||||||||||||||||||||||    
T  27906747 atattttttaaaagataaatacaaggtgccg------------ccacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 27906824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 9172941 - 9173130
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||||||||| |||||||| | |||||||||||| | |||||||| | ||||  ||          ||| | |||||||||||||    
T  9172941 agggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaacaatgttctattt 9173040  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  9173041 atattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 9173130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 9180923 - 9181112
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||||||||| |||||||| | |||||||||||| | |||||||| | ||||  ||          ||| | |||||||||||||    
T  9180923 agggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaacaatgttctattt 9181022  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  9181023 atattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 9181112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 19955911 - 19955723
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||| |||||| |||||||||||| ||||||||   |||||||||||| ||||||||||||||||||  |         |||| ||||||| |||||||    
T  19955911 agggctgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgaatttttttttaaaa-agcaatgatctattt 19955813  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  19955812 atattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacc 19955723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 40501708 - 40501897
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||||||||| ||| ||||   ||||||||||||||||||||||||||||||| ||         |||| || |||| |||||||    
T  40501708 agggccgtccctaagaattcggaggctcgactctgagaatgaaaagaggtcagtgataaaatcaaaacgtattttttaaaaaaaaagtaatgatctattt 40501807  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||| |||| |||||||||||||||||||||| ||||| |||||    
T  40501808 atattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaagaacctccacc 40501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 201 - 375
Target Start/End: Original strand, 21740853 - 21741029
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn--aaaagagcaatgttctat 298  Q
    |||||||||| |||||||||||||| ||||||||   |||||||||||| |||||||||||||||||  ||           ||||||||||||||||||    
T  21740853 agggccgtccttgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaatgtatttttttttttaaaagagcaatgttctat 21740952  T
Q  299 ttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtataca 375  Q
    || |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  21740953 ttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 281 - 390
Target Start/End: Complemental strand, 27559752 - 27559643
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||| |||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27559752 aaaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 27559653  T
Q  381 aacccccacc 390  Q
    ||||||||||    
T  27559652 aacccccacc 27559643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 217 - 390
Target Start/End: Original strand, 41697072 - 41697244
Alignment:
Q  217 attcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaagat 316  Q
    ||||||| | |||||||| | ||||||||||||||||||||||||||||||| ||         |||||||| |||||||||||||||||||||||||||    
T  41697072 attcggaagctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgta-ttttttttaaaagagcgatgttctatttatattttttaaaagat 41697170  T
Q  317 aaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||  |  ||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  41697171 aaatacaaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgaggaacccccacc 41697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 201 - 361
Target Start/End: Original strand, 22865379 - 22865538
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||||||||||||||||  ||||||| | ||||||||||||||| ||||||||||||||| ||         ||||||||||||||||||||    
T  22865379 agggccgtccctgagaattcggaggcacggctctgggaatgaaaagaggtcaatgataaaatcaaaacgtattttttttcaaaagagcaatgttctattt 22865478  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaat 361  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||    
T  22865479 atattttttaaaagataaatacaagatgctctatatat-cggtacacccaaaggtgaaaat 22865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 283 - 390
Target Start/End: Original strand, 1366878 - 1366985
Alignment:
Q  283 aagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaa 382  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  1366878 aagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaa 1366977  T
Q  383 cccccacc 390  Q
    ||||||||    
T  1366978 cccccacc 1366985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 205 - 388
Target Start/End: Original strand, 51607363 - 51607545
Alignment:
Q  205 ccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatat 304  Q
    |||||||| | |||||||||| |||||||| | ||||||||||||||||||||||||||||||| ||         |||| |  |||||| |||||||||    
T  51607363 ccgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaaa--aatgttttatttatat 51607460  T
Q  305 tttttaaaagataaatacaagatg-ccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaaccccca 388  Q
    ||||||||||||||||| ||| || |||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||    
T  51607461 tttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaactccca 51607545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 201 - 373
Target Start/End: Complemental strand, 6889804 - 6889634
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||| ||| |||||||||| |||| |||   ||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||    
T  6889804 agggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacgta--tttttttaaaagagcaatgttctattt 6889707  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtata 373  Q
    ||||||||||||||||||||||||  |  ||||||||||||||||| |||||||||||||||| | |||||||    
T  6889706 atattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtata 6889634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 201 - 373
Target Start/End: Complemental strand, 6891650 - 6891480
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||| ||| |||||||||| |||| |||   ||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||    
T  6891650 agggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacgta--tttttttaaaagagcaatgttctattt 6891553  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtata 373  Q
    ||||||||||||||||||||||||  |  ||||||||||||||||| |||||||||||||||| | |||||||    
T  6891552 atattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtata 6891480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 25 - 189
Target Start/End: Complemental strand, 19242547 - 19242383
Alignment:
Q  25 tacacaaaagcgtctctatgttagcttattgtgtgtagcaaacacaagatcgctaactcttaaccatctaatgaatacttgttgcacaaataatcattct 124  Q
    |||||||||| ||||||||||||||||||| |||||| |||||||||| |   ||||||||||| | || |||| |||||||||||||  | ||||||||    
T  19242547 tacacaaaagtgtctctatgttagcttattatgtgtaacaaacacaagcttattaactcttaactaactcatgattacttgttgcacatgtcatcattct 19242448  T
Q  125 ctaactaactacctaacagtctaatgattacttgctacgtaagtaatccttctttaactaatatg 189  Q
    |||||||||| | ||||  |||||||||||||||||||  |||||||||||| |||||| |||||    
T  19242447 ctaactaactgcgtaactatctaatgattacttgctacacaagtaatccttccttaactgatatg 19242383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 203 - 390
Target Start/End: Original strand, 13913401 - 13913589
Alignment:
Q  203 ggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttat 302  Q
    |||||||||| |||||||||||| | ||||||   |||||||||| | |||||||||||||||||  ||         |||| ||||||| |||||||||    
T  13913401 ggccgtccctaagaattcggaggcttggctctgagaatgaaaagatgccagtgataaaatcaaaatgtattttttttaaaaa-agcaatgatctatttat 13913499  T
Q  303 attttttaaaagataaatacaagatgccg--tatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||| ||| |||||  ||||||||||||||||| | | |||||||||||||||||||||||||| ||||||||||    
T  13913500 attttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgagaaacccccacc 13913589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 282 - 384
Target Start/End: Original strand, 38547035 - 38547137
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| | |||||||| |||| | ||||||||||||    
T  38547035 aaagatcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgagga 38547134  T
Q  382 acc 384  Q
    |||    
T  38547135 acc 38547137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 39134720 - 39134824
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaa-gataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 379  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||| ||| ||||||||||  |||||||| |||||| ||| ||||| |||||||||||    
T  39134720 aaaagaacaatgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgag 39134819  T
Q  380 gaacc 384  Q
    |||||    
T  39134820 gaacc 39134824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 384
Target Start/End: Complemental strand, 45758609 - 45758506
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| |||||||||||||||||| |||| ||  |||||||||   |||| ||| |||||||||| ||||||||||||||||||    
T  45758609 aaaagaacaatgttctatttaaattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgagg 45758510  T
Q  381 aacc 384  Q
    ||||    
T  45758509 aacc 45758506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 384
Target Start/End: Original strand, 43235774 - 43235871
Alignment:
Q  289 aatgttctatttatatttttta--aaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||||||||||| |||||||   |||||||||||||||||| ||||||||||  ||||||||| |||||||||| |||| |||||||||||||||||    
T  43235774 aatgttctatttaaatttttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacc 43235871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 282 - 384
Target Start/End: Complemental strand, 26804059 - 26803960
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    ||||| ||||| | |||||| |||||||||||||||||||||||||| |||||||||||| |||||    |||||||||| ||||||||||||||||| |    
T  26804059 aaagaacaatgctatatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaa 26803963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 390
Target Start/End: Complemental strand, 44895827 - 44895658
Alignment:
Q  216 aattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatttatattttttaaaag 314  Q
    |||||||||| |||| ||| | |||||||||||||| |||| ||||||||||||||          |||| | ||||| |||||||||||||||||||||    
T  44895827 aattcggaggttcggttctgggaatgaaaagaggtcggtgaaaaaatcaaaacatattttttttttaaaaaaacaatgatctatttatattttttaaaag 44895728  T
Q  315 ataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||| ||| || ||  |      |||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  44895727 ataaatataaggtggcgggt------ggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccacc 44895658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 281 - 382
Target Start/End: Complemental strand, 5533428 - 5533326
Alignment:
Q  281 aaaagagcaatgttctatttatatttttt-aaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 379  Q
    |||||| |||| ||||||||| ||||||| |||||||||| ||||| |||||||||||||  |||||  || |||||||||| |||||||||||||||||    
T  5533428 aaaagaacaatattctatttaaatttttttaaaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgag 5533329  T
Q  380 gaa 382  Q
    |||    
T  5533328 gaa 5533326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 281 - 379
Target Start/End: Complemental strand, 38853637 - 38853539
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 379  Q
    |||||| || ||||||||||| |||||||||| |||||||||||| || ||||||||||  ||| | ||| |||||||||| |||||||||||||||||    
T  38853637 aaaagaacagtgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatgag 38853539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 34247216 - 34247154
Alignment:
Q  206 cgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaac 268  Q
    ||||| |||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  34247216 cgtccttgagaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaac 34247154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 384
Target Start/End: Complemental strand, 33170867 - 33170771
Alignment:
Q  288 caatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||||| |||||| |||||||||||  |||||||||  ||  |||||||||||||||||| |  ||||||||| ||||||||||||||||| ||||    
T  33170867 caatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgagaaacc 33170771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 384
Target Start/End: Complemental strand, 50146411 - 50146308
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| | ||||| |||||||||| |||| |||||| |||||| | || ||||| |||| ||||| | |||| |||||||||||    
T  50146411 aaaagaacaatgttctatttaaactttttgaaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgagg 50146312  T
Q  381 aacc 384  Q
    ||||    
T  50146311 aacc 50146308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 384
Target Start/End: Complemental strand, 6221791 - 6221690
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    ||||| |||||||||||||| |||||| |||||||||||||||  ||||||||||| |||||||| | | | |||||||| | || |||||| |||||||    
T  6221791 aaagaacaatgttctatttaaattttt-aaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgagga 6221693  T
Q  382 acc 384  Q
    |||    
T  6221692 acc 6221690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 371
Target Start/End: Complemental strand, 35392376 - 35392295
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgta 371  Q
    |||||| |||||| |||||||||  |||||||||||| |||||||||||||||||| | ||| |||||||||| |||||||||    
T  35392376 aatgttttatttaaattttttaag-gataaatacaaggtgccgtatatatgcggtatatccaaaggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 344
Target Start/End: Original strand, 17322621 - 17322684
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggta 344  Q
    |||||| |||||||||||||||||||||| ||||||||||||||  |  |||||||||||||||    
T  17322621 aaaagaacaatgttctatttatatttttttaaagataaatacaatgtagcgtatatatgcggta 17322684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 381
Target Start/End: Original strand, 10925951 - 10926052
Alignment:
Q  281 aaaagagcaatgttctatttatat-tttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 379  Q
    |||||| |||| |||||||||  | ||||||||| ||||||||||  ||||||||||||| | | || ||| || ||||||| |||||||||||||||||    
T  10925951 aaaagaacaatattctatttaagtatttttaaaaaataaatacaatgtgccgtatatatgagatgcatccaaagatgaaaatcactaccgtatacatgag 10926050  T
Q  380 ga 381  Q
    ||    
T  10926051 ga 10926052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 34247106 - 34247066
Alignment:
Q  330 cgtatatatgcggtacacccagaggtgaaaatgactaccgt 370  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  34247106 cgtatatatgcggtacaccaagagatgaaaatgactaccgt 34247066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 1526 - 1338
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||| ||         ||||||||| ||||||||||    
T  1526 agggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgta-ttttttttaaaagagcactgttctattt 1428  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1427 atattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacc 1338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 2e-65; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 212 - 390
Target Start/End: Original strand, 38209520 - 38209698
Alignment:
Q  212 tgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaa 311  Q
    |||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| ||||         ||||||||||||||||||||||||||||||    
T  38209520 tgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatataatttttttttaaagagcaatgttctatttatattttttaa 38209619  T
Q  312 aagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38209620 aagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 38209698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 204 - 390
Target Start/End: Complemental strand, 47129172 - 47128987
Alignment:
Q  204 gccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttata 303  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||  ||         |||||| ||||||||||||||||    
T  47129172 gccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatgta-ttttttttaaaagaacaatgttctatttata 47129074  T
Q  304 ttttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  47129073 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacc 47128987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 54780967 - 54780777
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatt 299  Q
    ||||||||||||||||||||||||| | |||||| | |||||||||||| |||||||||||||||||| ||          |||||||||||||||||||    
T  54780967 agggccgtccctgagaattcggaggcttggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctatt 54780868  T
Q  300 tatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  54780867 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 54780777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 34768493 - 34768681
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||| |||||||||||||||||||| |||||| | | ||||||||||||  ||||||||||||||||||||         ||||||||||||||||||||    
T  34768493 agggtcgtccctgagaattcggaggctcggctttgggaatgaaaagaggctagtgataaaatcaaaacata-ttttttttaaaagagcaatgttctattt 34768591  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34768592 atattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgaggaacccccacc 34768681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 32915574 - 32915385
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||||| ||||||||||||||||||            |||||||| |||||||||||    
T  32915574 agggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacggttttttttttaaaagagcgatgttctattt 32915475  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  32915474 atattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgaggaacccccacc 32915385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 214 - 390
Target Start/End: Original strand, 43455463 - 43455638
Alignment:
Q  214 agaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatattttttaaaa 313  Q
    |||||||||||| ||| |||| | ||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||    
T  43455463 agaattcggaggctcgactctgggaatgaaaagaggtcagtgataaaatcaaaacgta-ttatttttaaaagagcaatgttctatttatattttttaaaa 43455561  T
Q  314 gataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43455562 gataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 43455638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 32128773 - 32128584
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||| ||||| |||||||| | |||||||| |||||||||||||||||||||| ||         ||||||||||||||||||||    
T  32128773 agggccgtccctaagaatttggaggctcggctctgggaatgaaaaaaggtcagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctattt 32128674  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||    
T  32128673 atattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacataagaaacccccacc 32128584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 34027767 - 34027579
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||||||||| |||||||| | |||||||||||| |||||||||||||||||| ||         |||| |||||||||||||||    
T  34027767 agggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaa-agcaatgttctattt 34027669  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  34027668 atattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgaggaacccccacc 34027579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 10979091 - 10978900
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn--aaaagagcaatgttctat 298  Q
    ||||||||| ||||||||||||||| |  ||||| | ||||||||||||| ||||||||||||||||| ||           ||||||||||||||||||    
T  10979091 agggccgtctctgagaattcggaggtttagctctgggaatgaaaagaggttagtgataaaatcaaaacgtatttttttttttaaaagagcaatgttctat 10978992  T
Q  299 ttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10978991 ttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgaggaacccccacc 10978900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 201 - 385
Target Start/End: Original strand, 37777141 - 37777325
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||| |||||| | |||||||||| |||||||| | ||||||||||||||||||||||||||||||| ||         |||| || ||||||||||||    
T  37777141 agggctgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttaaaaaaaaagtaatgttctattt 37777240  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaaccc 385  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37777241 atattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccc 37777325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 2790660 - 2790848
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||| || |||||||||||| |||||||| | |||||||||||  ||||||||||||||||||||          |||||| |||||||||||||    
T  2790660 agggccgtctctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacatt-ttttttttaaaagaacaatgttctattt 2790758  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2790759 atattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 2790848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 204 - 390
Target Start/End: Complemental strand, 1105717 - 1105532
Alignment:
Q  204 gccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttata 303  Q
    ||||||| ||||||||| |||| |||||||| | ||||||||||||||||||||||||||||||| ||         |||||||  ||||||||||||||    
T  1105717 gccgtccttgagaattcagaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgta-ttttttttaaaagagtgatgttctatttata 1105619  T
Q  304 ttttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||| |  ||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  1105618 ttttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgagcaacccccacc 1105532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 55255446 - 55255269
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||||||||||||||||        ||||||||||||||| ||||    
T  55255446 agggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttccattt 55255347  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| |||||             ||||||||||||||||||||||||||||||||||||||||||||||    
T  55255346 atattttttaaaagataaatacaaggtgccg------------ccacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 55255269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 48209435 - 48209240
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaa-----atcaaaacataannnnnnnn-aaaagagcaatgtt 294  Q
    ||||||||||||||||||||||||| |||||||| | | |||||||||  ||||||||||     |||||||| ||          ||||||||||||||    
T  48209435 agggccgtccctgagaattcggaggctcggctctgggagtgaaaagagaccagtgataaattaaaatcaaaacgtattttttttttaaaagagcaatgtt 48209336  T
Q  295 ctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  48209335 ctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgagaaacccccacc 48209240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 5128759 - 5128949
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatc-aaaacataannnnnnnnaaaagagcaatgttctatt 299  Q
    |||||||||||||||||||  |||| |||||||| | |||||||||||| ||||||||||||| ||||| |          | |||||| || |||||||    
T  5128759 agggccgtccctgagaatttagaggctcggctctgggaatgaaaagaggccagtgataaaatctaaaacgtttttttttttagaagagcgatattctatt 5128858  T
Q  300 tatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||    
T  5128859 tatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaacctccacc 5128949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 19498690 - 19498504
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||| || |||||||||||| |||||||||| |||||||| ||| || ||||||||||||||| ||         ||||||||||||||||||||    
T  19498690 agggccgtcactaagaattcggaggctcggctctaggaatgaaaacaggccaatgataaaatcaaaacgta-ttttgtttaaaagagcaatgttctattt 19498592  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| |||||  ||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  19498591 atattttttaaaagataaatataaggtgccg--tatatgcggtacagccaaaggtgaaaatgactactgtatacatgaggaacccccacc 19498504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 201 - 386
Target Start/End: Original strand, 54083161 - 54083345
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| | |||||||||| ||||||||   ||||||||||||||||||||||||||||||| ||         |||| | ||||| |||||||    
T  54083161 agggccgtccctaaaaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaaa-caatgatctattt 54083259  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccc 386  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||    
T  54083260 atattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgaggaacccc 54083345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 16845209 - 16845021
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||||||||| |||||||| |||||||||| ||  |||||||||||||||||| ||         ||||||||||||||||||||    
T  16845209 agggccgtccctaagaattcggaggctcggctctggaaatgaaaaaagc-cagtgataaaatcaaaacgta-ttttttttaaaagagcaatgttctattt 16845112  T
Q  301 atatttttt-aaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||| |||||||||||| ||| || ||||||||||  |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  16845111 atatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgaggaacccccacc 16845021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 10428117 - 10428312
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||||  ||||||||||||| |||||||| | |||||||||||||||||| |||||||||||  ||         |||||  |||||||||||||    
T  10428117 agggccgtcctcgagaattcggaggctcggctctgggaatgaaaagaggtcagtgctaaaatcaaaatttattttttttaaaaag--caatgttctattt 10428214  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagag--------gtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| |||||    
T  10428215 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaattgtgaaaatgactaccgtatacatgaggaacctccacc 10428312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 203 - 384
Target Start/End: Original strand, 35779248 - 35779426
Alignment:
Q  203 ggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttat 302  Q
    |||||||| |||||||||||||| ||| ||| || ||||||||||||  ||||||||||||||||| ||          |||||||||||||||||| ||    
T  35779248 ggccgtccttgagaattcggaggttcgactcgaggaatgaaaagaggctagtgataaaatcaaaacgtatttttttt--aaagagcaatgttctatt-at 35779344  T
Q  303 attttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  35779345 attttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacc 35779426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 282 - 390
Target Start/End: Complemental strand, 37514767 - 37514659
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  37514767 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaaga 37514668  T
Q  382 acccccacc 390  Q
    | |||||||    
T  37514667 atccccacc 37514659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 201 - 390
Target Start/End: Original strand, 16882314 - 16882502
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||||||||| |||||||||| |||||||||| |||||||||||||||||||| ||         |||| | |||||||||||||    
T  16882314 agggccgtccctaagaattcggaggctcggctctaggaatgaaaagaagtcagtgataaaatcaaaacgtatttttttaaaaaaaa-caatgttctattt 16882412  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||| ||||||||||||||||| ||| |||||| ||||| ||||||||| | |||||||||||||||||||||  ||| ||||||| ||||    
T  16882413 atactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtatgtatggggaaccctcacc 16882502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 201 - 358
Target Start/End: Complemental strand, 17679588 - 17679432
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    ||||||||| ||||||||||||||| |||| ||| | |||||||||||  |||||||||||||||||| ||         ||||||||||| ||||||||    
T  17679588 agggccgtctctgagaattcggaggctcggttctgggaatgaaaagagaccagtgataaaatcaaaacgta-ttttttttaaaagagcaatattctattt 17679490  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaa 358  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17679489 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 17679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 40089713 - 40089516
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||| ||||||| |||||||||||| |||||||| | |||||||||| |||||||||||||||||||| ||         |||| ||||||||| |||||    
T  40089713 agggtcgtccctaagaattcggaggctcggctcttggaatgaaaagaagtcagtgataaaatcaaaacgtattttttttaaaaa-agcaatgttttattt 40089615  T
Q  301 atattt---------tttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||         ||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  40089614 atatttatttatatttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 40089516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 291 - 390
Target Start/End: Complemental strand, 13460306 - 13460207
Alignment:
Q  291 tgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacccccacc 13460207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 211 - 390
Target Start/End: Complemental strand, 35465284 - 35465107
Alignment:
Q  211 ctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatttttta 310  Q
    ||||||||||||||| |||  ||| | ||||||||||||||||||||||||||||||||||         |||||| ||||||| |||||||||||||||    
T  35465284 ctgagaattcggaggctcgattctgggaatgaaaagaggtcagtgataaaatcaaaacata-ttttttttaaaagaacaatgttatatttatatttttta 35465186  T
Q  311 aaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
     |||||||||| ||| ||| |||||||||||||||||| | | |||||||| |||||||||||||||||||| |||||||    
T  35465185 caagataaataaaaggtgc-gtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgaggaatccccacc 35465107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 206 - 390
Target Start/End: Original strand, 38352189 - 38352362
Alignment:
Q  206 cgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttatatt 305  Q
    ||||||| |||||||||||| |||||||| | ||||||||||| ||||||||||||||||||| ||         |||| || |||| ||||||||||||    
T  38352189 cgtccctaagaattcggaggctcggctctgggaatgaaaagagatcagtgataaaatcaaaacgtatttttttttaaaa-agtaatgatctatttatatt 38352287  T
Q  306 ttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||| ||| ||          |||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  38352288 ttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtgtacatgaggaacccccacc 38352362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 362
Target Start/End: Complemental strand, 51964897 - 51964736
Alignment:
Q  203 ggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttat 302  Q
    |||| ||| ||| |||||||||  |||||||| | |||||||||||| |  ||||||||||||||| ||         ||||||||||||||||||||||    
T  51964897 ggccatccttgaaaattcggagactcggctctgggaatgaaaagaggccgatgataaaatcaaaacgta-ttttttttaaaagagcaatgttctatttat 51964799  T
Q  303 atttttt---aaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatg 362  Q
    |||||||   |||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  51964798 attttttttaaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatg 51964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 281 - 384
Target Start/End: Complemental strand, 52468395 - 52468292
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||   |||| ||| |||||||||| |||||||||| |||||||    
T  52468395 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgagg 52468296  T
Q  381 aacc 384  Q
    ||||    
T  52468295 aacc 52468292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 302 - 384
Target Start/End: Original strand, 4167910 - 4167992
Alignment:
Q  302 tattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||| |||||| |||||||||||||||    
T  4167910 tattttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacc 4167992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 281 - 348
Target Start/End: Original strand, 51691913 - 51691980
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacc 348  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  51691913 aaaagagcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 51691980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 384
Target Start/End: Complemental strand, 27112132 - 27112036
Alignment:
Q  288 caatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    |||||||| ||||| ||||||||||||||||||||||| || | |||||||||| |||||| | | |||||||| ||||||||||||||||||||||    
T  27112132 caatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 27112036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 384
Target Start/End: Original strand, 36118463 - 36118559
Alignment:
Q  288 caatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    |||||||||||||| ||||||||||||||||||||||| || |||||||||| | |||||||| |  ||||||| ||||||||||||||||| ||||    
T  36118463 caatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgagtaacc 36118559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 201 - 363
Target Start/End: Original strand, 16922246 - 16922409
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnn-aaaagagcaatgttctatt 299  Q
    ||||||||||||||||||| ||||| ||| || | | |||||||||||  |||||||||||||||||| |           |||||||||||||||||||    
T  16922246 agggccgtccctgagaatttggaggctcgactttgggaatgaaaagagaccagtgataaaatcaaaacgttttttatttttaaaagagcaatgttctatt 16922345  T
Q  300 tatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatga 363  Q
    |||||||||||||||||||||| ||  || ||||||||||| |||  |||| ||||||||||||    
T  16922346 tatattttttaaaagataaatataaagtgtcgtatatatgcagtatccccaaaggtgaaaatga 16922409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 281 - 354
Target Start/End: Original strand, 9578662 - 9578736
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagat-gccgtatatatgcggtacacccagagg 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| |||||||    
T  9578662 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtagccatatatatgcggtacatccagagg 9578736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 281 - 390
Target Start/End: Complemental strand, 24969536 - 24969437
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||| ||||||| |||||||||||||||||||||||||||| ||| ||          |||||||||||| |||||||||||||||||||||||||||||    
T  24969536 aaaaaagcaatgatctatttatattttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtatacatgagg 24969447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 36178774 - 36178684
Alignment:
Q  288 caatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatga 378  Q
    |||||||||||||| ||| ||||||||||||||||||| || |||||||||||| |||||||| | |||||||| |||||| |||||||||    
T  36178774 caatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatga 36178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 281 - 361
Target Start/End: Original strand, 39655252 - 39655332
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaat 361  Q
    |||||| |||||||||||||| ||||||||||||||||||||||  | ||| |||||||||||||||||| ||||||||||    
T  39655252 aaaagaacaatgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaat 39655332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 10041998 - 10042101
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| |||||| |||| ||||||||||| |||||||| |||| | |||||| | | |||||||| ||||||||||||| ||||    
T  10041998 aaaagaacaatgttctatttaaatttttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtatacaggagg 10042097  T
Q  381 aacc 384  Q
    ||||    
T  10042098 aacc 10042101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 23509846 - 23509905
Alignment:
Q  331 gtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  23509846 gtatatatgcggtacacctagaggtgaaaatgactaccgtagacatgaggaacccccacc 23509905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 281 - 384
Target Start/End: Complemental strand, 24397043 - 24396940
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||| || |||||| ||||||||||||||||||| ||| ||| ||||||||| | ||||| || |||||||||| |||| |||||||||||||    
T  24397043 aaaagaacaatattttatttaaattttttaaaagataaatataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgagg 24396944  T
Q  381 aacc 384  Q
    ||||    
T  24396943 aacc 24396940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 384
Target Start/End: Original strand, 2135326 - 2135422
Alignment:
Q  288 caatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    |||| ||||||||| ||||||||||||||||||||||| || |||||||||||| |||| ||| |||| || || |||| |||||| ||||||||||    
T  2135326 caatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggtaaacatcactatcgtatatatgaggaacc 2135422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 384
Target Start/End: Original strand, 37744916 - 37745011
Alignment:
Q  290 atgttctatttatatttt-ttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    |||||||||||| ||||| |||||||||||||| ||| || || ||||||||| |||| ||| |||||||||| |||||||||||| |||||||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacc 37745011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 383
Target Start/End: Original strand, 39329390 - 39329492
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| ||||||||| |||| ||||||||||||||||||||||| ||  ||||||||| | |||||||| || |||||||   ||||||||||| ||||    
T  39329390 aaaagaacaatgttctctttaaattttttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacaggagg 39329489  T
Q  381 aac 383  Q
    |||    
T  39329490 aac 39329492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 336
Target Start/End: Original strand, 23508432 - 23508564
Alignment:
Q  205 ccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctatttata- 303  Q
    |||||| ||| |||||||||| |||||| | | |||||||||||| |||||||||||||||||  ||          || |||||||||||||||||||     
T  23508432 ccgtccatgaaaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaatgtattttttttttaatgagcaatgttctatttataa 23508531  T
Q  304 ttttttaaaagataaatacaagatgccgtatat 336  Q
    |||||||||||||||||||||| || |||||||    
T  23508532 ttttttaaaagataaatacaaggtgtcgtatat 23508564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 376
Target Start/End: Original strand, 36362869 - 36362964
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacat 376  Q
    |||||| ||||| ||| |||| ||||||||||||||||||||||  ||||||||||||||  |||||||| | ||| |||| |||||| |||||||    
T  36362869 aaaagaacaatgctctgtttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatatacat 36362964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 384
Target Start/End: Complemental strand, 40217327 - 40217238
Alignment:
Q  295 ctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||||| ||||||||||||||||||| ||| || |||||||||||| |||| ||| || ||||||| | || | |||||||||| ||||    
T  40217327 ctatttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaatcattagcatatacatgagtaacc 40217238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 383
Target Start/End: Complemental strand, 15735189 - 15735102
Alignment:
Q  291 tgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaac 383  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||     |||||| | |  ||||||| | |||||||||||||||||||    
T  15735189 tgttctatttaaattttttaaaagataaatacaagacgtcgtatata-----tacaccaaaaaatgaaaatcattaccgtatacatgaggaac 15735102  T

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Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 384
Target Start/End: Complemental strand, 45656277 - 45656181
Alignment:
Q  288 caatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||||| |||||| |||||||||||||||||| |||| || | |||||||||| || | ||| | |||||||| || | ||||||||||| |||||    
T  45656277 caatgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatgcgataaatccaaatgtgaaaatcacgaacgtatacatgacgaacc 45656181  T

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Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 325
Target Start/End: Complemental strand, 24614061 - 24614018
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaag 325  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  24614061 aaagaacaatgttctatttaaattttttaaaagataaatacaag 24614018  T

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Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 24969785 - 24969718
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaac 268  Q
    |||||||||||| |||||||||||| ||| |||| | ||||||||||||  |||||||||| ||||||    
T  24969785 agggccgtccctaagaattcggaggctcgactctgggaatgaaaagaggctagtgataaaaacaaaac 24969718  T

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Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 323
Target Start/End: Original strand, 30507120 - 30507162
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaataca 323  Q
    |||||| |||||||||||||| |||||||||||||||||||||    
T  30507120 aaaagaacaatgttctatttaaattttttaaaagataaataca 30507162  T

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Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 2975369 - 2975413
Alignment:
Q  227 tcggctctagaaatgaaaagaggtcagtgataaaatcaaaacata 271  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||    
T  2975369 tcggctctgaaaatgaaaagaggtcaatgataaaatcaaaacata 2975413  T

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Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 13460359 - 13460305
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtg 255  Q
    |||||||||| |||||||||||||| ||| |||| | ||| ||||||||||||||    
T  13460359 agggccgtccttgagaattcggaggctcgactctgggaataaaaagaggtcagtg 13460305  T

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Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 29425187 - 29425237
Alignment:
Q  296 tatttatattttttaaaagataaatacaagatgccgtatatatgcggtaca 346  Q
    |||||| ||||||||||| ||||||| ||| |||||||||||||| |||||    
T  29425187 tatttaaattttttaaaaaataaatataaggtgccgtatatatgcagtaca 29425237  T

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Target: scaffold0039 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 201 - 390
Target Start/End: Complemental strand, 106722 - 106533
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||| |||||| ||||| |||||||| | |||||||||||| |||||||||||||||||| ||         |||||| |||||||||||||    
T  106722 agggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaagaacaatgttctattt 106623  T
Q  301 atattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacc 390  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  106622 atattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacc 106533  T

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Target: scaffold1590 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 281 - 384
Target Start/End: Original strand, 257 - 360
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| | |||||||| |||||||||||||||| |    
T  257 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatg 356  T
Q  381 aacc 384  Q
    ||||    
T  357 aacc 360  T

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Target: scaffold0012 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 289 - 384
Target Start/End: Original strand, 206496 - 206591
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  206496 aatgttctatttaaattttgtaaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacc 206591  T

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Target: scaffold0018 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 288 - 384
Target Start/End: Original strand, 173516 - 173612
Alignment:
Q  288 caatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||||||| |||||||| |||| ||||| |||||||||||| |||||||||    
T  173516 caatgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacc 173612  T

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Target: scaffold0097 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 288 - 384
Target Start/End: Complemental strand, 39022 - 38926
Alignment:
Q  288 caatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    |||||||||||||| ||||||||||||||||||||||| || |||||||||||| ||||| || | |||||||| ||||||||||| ||||||||||    
T  39022 caatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacc 38926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 282 - 382
Target Start/End: Original strand, 23993 - 24093
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 381  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| | |||||||| | |||||||| ||| ||||    
T  23993 aaagaacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcataagga 24092  T
Q  382 a 382  Q
    |    
T  24093 a 24093  T

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Target: scaffold1320 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 384
Target Start/End: Complemental strand, 1450 - 1355
Alignment:
Q  289 aatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    ||||||||||||| | ||||||||||||||||| ||| ||| ||||||||||  |||||||| | |||||||| |||| |||||||||||||||||    
T  1450 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 1355  T

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Target: scaffold0001 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 201 - 324
Target Start/End: Complemental strand, 183243 - 183121
Alignment:
Q  201 agggccgtccctgagaattcggaggatcggctctagaaatgaaaagaggtcagtgataaaatcaaaacataannnnnnnnaaaagagcaatgttctattt 300  Q
    |||||||||||||| ||||| |||| |||||||| | |||||||||||| |||||||||||| ||||| | |        |||||||  |||||||||||    
T  183243 agggccgtccctgaaaattcagaggctcggctctgggaatgaaaagaggccagtgataaaattaaaacgt-attttttttaaaagagagatgttctattt 183145  T
Q  301 atattttttaaaagataaatacaa 324  Q
    ||||||||||||||||||||||||    
T  183144 atattttttaaaagataaatacaa 183121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 388
Target Start/End: Complemental strand, 181969 - 181916
Alignment:
Q  335 atatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaaccccca 388  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  181969 atatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaaccccca 181916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 281 - 383
Target Start/End: Original strand, 230858 - 230960
Alignment:
Q  281 aaaagagcaatgttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 380  Q
    |||||| |||||||||||||| |||| |||||||||||||  ||| ||  ||||||||||| || ||||| |||||||||| |||||| |||||||||||    
T  230858 aaaagaacaatgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgagg 230957  T
Q  381 aac 383  Q
    |||    
T  230958 aac 230960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 384
Target Start/End: Complemental strand, 40191 - 40086
Alignment:
Q  281 aaaagagcaatgttctattta--tattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatga 378  Q
    |||||| ||||||||||||||  | |||||||||||||||||||||| |||||||| ||||  ||||||||  |||||||||| || | |||||||||||    
T  40191 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatga 40092  T
Q  379 ggaacc 384  Q
    | ||||    
T  40091 gcaacc 40086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 384
Target Start/End: Complemental strand, 138251 - 138146
Alignment:
Q  281 aaaagagcaatgttctattta--tattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatga 378  Q
    |||||| ||||||||||||||  | |||||||||||||||||||||| |||||||| ||||  ||||||||  |||||||||| || | |||||||||||    
T  138251 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatga 138152  T
Q  379 ggaacc 384  Q
    | ||||    
T  138151 gcaacc 138146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 317 - 384
Target Start/End: Complemental strand, 16095 - 16028
Alignment:
Q  317 aaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 384  Q
    |||||||||||| ||||| ||||||||||| ||| || ||||||| ||||||||||||||||| ||||    
T  16095 aaatacaagatgtcgtatgtatgcggtacatccaaagatgaaaatcactaccgtatacatgagaaacc 16028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 325
Target Start/End: Complemental strand, 16168 - 16125
Alignment:
Q  282 aaagagcaatgttctatttatattttttaaaagataaatacaag 325  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  16168 aaagagaaatgttctatttaaattttttaaaagataaatacaag 16125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 351360 - 351413
Alignment:
Q  308 ttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaat 361  Q
    |||||||||||||||||| || ||||||||||  ||||||||| ||||||||||    
T  351360 ttaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaat 351413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 23976 - 23879
Alignment:
Q  292 gttctatttatattttttaaaagataaatacaagatgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccac 389  Q
    ||||||||||| |||||||||| |||||||  || |||||||| | || || || |||| |  | |||||||||||||||||||  || |||||||||    
T  23976 gttctatttattttttttaaaaaataaatatgaggtgccgtatttttggggaacccccaaaaataaaaatgactaccgtatacacaagaaacccccac 23879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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