View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2784-Insertion-8 (Length: 583)
Name: NF2784-Insertion-8
Description: NF2784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2784-Insertion-8 |
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Alignment Details
Target: chr4 (Bit Score: 448; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 448; E-Value: 0
Query Start/End: Original strand, 8 - 573
Target Start/End: Complemental strand, 42958448 - 42957902
Alignment:
| Q |
8 |
tgggcaatgtcttaagagccaaatatgaccaatataattgggagagtgaccaagttgaagccacagttgtaaactcgtgcttgttgaaaacgttggttct |
107 |
Q |
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| T |
42958448 |
tgggcaatgtcttaagagccgtatatgaccaatataattgggagagtgaccaagttgaagccacagttgtaaactcatgcttgttgaaaacgttggttct |
42958349 |
T |
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| Q |
108 |
agtgtggctgtaaattgagcgatt-tcatattggttaattggaaacattgagaaactagtgtttgaagtgttgaatggattgcaccaagcttgagagtga |
206 |
Q |
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| T |
42958348 |
agtgtggctgtaaattgagcgattctcatattggttaattggaaacattgagaaactagtgtttgaagtgttgaatggattgcaccaagcttgagagtga |
42958249 |
T |
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| Q |
207 |
ccgaccggtttgaatatatattctcaaccagctgcataattgtgttgtgtttgactaactagagaataatatcgaaatttagatgttttgaaatattgac |
306 |
Q |
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| T |
42958248 |
tcg----gtttgaatatatattctcaaccagctgcataattgtgttgtgtttgacttactagagaataatatcgaaatttagatgttttgaaatattgac |
42958153 |
T |
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| Q |
307 |
ttcctagggaatttatttacaatatgtaggccattattcatcctaaattggaatttggtatggacattatagtatggctcgatgcagcggtagaaaattt |
406 |
Q |
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| T |
42958152 |
ttcgtagggaatttatttacaatatataggccattattcatcctaaattggaatttggtatggacattatagtatggctcgatgcagcggtagaaaattt |
42958053 |
T |
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| Q |
407 |
tgcgttgtgtctggttacaaagttacaaagtagttttaatctggacgataataacaggaatgaatgcgagtttggaggattaaagtgttagaacgacttc |
506 |
Q |
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| T |
42958052 |
tgcgttgtgtctggttaca--------aagtagttttaatctgaacgat--------gaatgaatgcgagtttggaggattaaagtgttagaacgacttc |
42957969 |
T |
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| Q |
507 |
atagttttatttggttgatgcatcatggccagttgcttactaattttaggatgtatcacttgcaagt |
573 |
Q |
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| T |
42957968 |
atagttttatttggttgatgaatcatggccagttgcttactaattttaggatgtatcacttgcaagt |
42957902 |
T |
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